Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28798.t1 | XP_003625951.1 | 96.7 | 335 | 9 | 1 | 1 | 333 | 1 | 335 | 2.50E-161 | 578.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28798.t1 | B9FHF3 | 81.4 | 318 | 55 | 1 | 11 | 324 | 10 | 327 | 1.8e-128 | 460.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28798.t1 | G7KSR8 | 96.7 | 335 | 9 | 1 | 1 | 333 | 1 | 335 | 1.8e-161 | 578.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049178 | MS.gene28798 | 0.804381 | 2.22E-49 | -1.69E-46 |
MS.gene049264 | MS.gene28798 | 0.827405 | 1.59E-54 | -1.69E-46 |
MS.gene049567 | MS.gene28798 | 0.827581 | 1.45E-54 | -1.69E-46 |
MS.gene050439 | MS.gene28798 | 0.808719 | 2.70E-50 | -1.69E-46 |
MS.gene050780 | MS.gene28798 | 0.833896 | 4.10E-56 | -1.69E-46 |
MS.gene051120 | MS.gene28798 | 0.81855 | 1.85E-52 | -1.69E-46 |
MS.gene051490 | MS.gene28798 | 0.855255 | 7.13E-62 | -1.69E-46 |
MS.gene051744 | MS.gene28798 | 0.86094 | 1.46E-63 | -1.69E-46 |
MS.gene051831 | MS.gene28798 | 0.807528 | 4.84E-50 | -1.69E-46 |
MS.gene051832 | MS.gene28798 | 0.821412 | 4.09E-53 | -1.69E-46 |
MS.gene051975 | MS.gene28798 | 0.814861 | 1.24E-51 | -1.69E-46 |
MS.gene051981 | MS.gene28798 | 0.800239 | 1.58E-48 | -1.69E-46 |
MS.gene052493 | MS.gene28798 | 0.80672 | 7.17E-50 | -1.69E-46 |
MS.gene052681 | MS.gene28798 | 0.800997 | 1.11E-48 | -1.69E-46 |
MS.gene053094 | MS.gene28798 | 0.837714 | 4.42E-57 | -1.69E-46 |
MS.gene053151 | MS.gene28798 | 0.831816 | 1.35E-55 | -1.69E-46 |
MS.gene05410 | MS.gene28798 | 0.804174 | 2.45E-49 | -1.69E-46 |
MS.gene05439 | MS.gene28798 | 0.800729 | 1.26E-48 | -1.69E-46 |
MS.gene054576 | MS.gene28798 | 0.875887 | 2.16E-68 | -1.69E-46 |
MS.gene054892 | MS.gene28798 | 0.825986 | 3.48E-54 | -1.69E-46 |
MS.gene054893 | MS.gene28798 | 0.821476 | 3.96E-53 | -1.69E-46 |
MS.gene055313 | MS.gene28798 | 0.811571 | 6.55E-51 | -1.69E-46 |
MS.gene055513 | MS.gene28798 | 0.806838 | 6.77E-50 | -1.69E-46 |
MS.gene055827 | MS.gene28798 | 0.814033 | 1.89E-51 | -1.69E-46 |
MS.gene056638 | MS.gene28798 | 0.803985 | 2.68E-49 | -1.69E-46 |
MS.gene056699 | MS.gene28798 | 0.811262 | 7.65E-51 | -1.69E-46 |
MS.gene056986 | MS.gene28798 | 0.807686 | 4.48E-50 | -1.69E-46 |
MS.gene057034 | MS.gene28798 | 0.80102 | 1.10E-48 | -1.69E-46 |
MS.gene057360 | MS.gene28798 | 0.80334 | 3.65E-49 | -1.69E-46 |
MS.gene058289 | MS.gene28798 | 0.820608 | 6.27E-53 | -1.69E-46 |
MS.gene058758 | MS.gene28798 | 0.803162 | 3.98E-49 | -1.69E-46 |
MS.gene059170 | MS.gene28798 | 0.834231 | 3.38E-56 | -1.69E-46 |
MS.gene059774 | MS.gene28798 | 0.882892 | 7.11E-71 | -1.69E-46 |
MS.gene059965 | MS.gene28798 | 0.809704 | 1.66E-50 | -1.69E-46 |
MS.gene060697 | MS.gene28798 | 0.88248 | 1.01E-70 | -1.69E-46 |
MS.gene060840 | MS.gene28798 | 0.821485 | 3.94E-53 | -1.69E-46 |
MS.gene061047 | MS.gene28798 | 0.813307 | 2.73E-51 | -1.69E-46 |
MS.gene06113 | MS.gene28798 | 0.809585 | 1.76E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene28798 | MS.gene35518 | PPI |
MS.gene28798 | MS.gene034372 | PPI |
MS.gene28798 | MS.gene059290 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28798.t1 | MTR_7g109340 | 96.716 | 335 | 9 | 1 | 1 | 333 | 1 | 335 | 0.0 | 672 |
MS.gene28798.t1 | MTR_8g006430 | 37.879 | 330 | 168 | 9 | 27 | 323 | 15 | 340 | 3.11e-52 | 178 |
MS.gene28798.t1 | MTR_4g078850 | 35.604 | 323 | 178 | 7 | 27 | 323 | 5 | 323 | 1.54e-46 | 161 |
MS.gene28798.t1 | MTR_3g108020 | 33.225 | 307 | 191 | 7 | 27 | 324 | 5 | 306 | 5.33e-46 | 159 |
MS.gene28798.t1 | MTR_4g015840 | 36.223 | 323 | 171 | 8 | 27 | 323 | 5 | 318 | 7.64e-46 | 159 |
MS.gene28798.t1 | MTR_2g014470 | 33.962 | 318 | 185 | 8 | 27 | 323 | 5 | 318 | 1.43e-43 | 153 |
MS.gene28798.t1 | MTR_2g090705 | 34.268 | 321 | 176 | 9 | 27 | 323 | 5 | 314 | 4.10e-42 | 149 |
MS.gene28798.t1 | MTR_4g050420 | 36.391 | 327 | 174 | 7 | 27 | 323 | 14 | 336 | 2.94e-39 | 143 |
MS.gene28798.t1 | MTR_2g087660 | 34.132 | 334 | 174 | 9 | 27 | 323 | 14 | 338 | 1.70e-38 | 141 |
MS.gene28798.t1 | MTR_2g087660 | 34.839 | 310 | 155 | 8 | 27 | 302 | 14 | 310 | 3.34e-35 | 130 |
MS.gene28798.t1 | MTR_2g014480 | 31.307 | 329 | 193 | 8 | 27 | 327 | 5 | 328 | 8.67e-34 | 127 |
MS.gene28798.t1 | MTR_1g087580 | 39.171 | 217 | 81 | 5 | 125 | 333 | 2 | 175 | 9.86e-34 | 123 |
MS.gene28798.t1 | MTR_3g087030 | 32.515 | 326 | 185 | 12 | 27 | 321 | 83 | 404 | 1.58e-32 | 125 |
MS.gene28798.t1 | MTR_4g023470 | 30.423 | 355 | 189 | 12 | 20 | 333 | 80 | 417 | 1.74e-28 | 114 |
MS.gene28798.t1 | MTR_2g104030 | 28.035 | 346 | 193 | 10 | 23 | 322 | 67 | 402 | 3.98e-28 | 114 |
MS.gene28798.t1 | MTR_3g027580 | 29.012 | 324 | 209 | 6 | 20 | 323 | 83 | 405 | 5.30e-28 | 113 |
MS.gene28798.t1 | MTR_5g037880 | 29.642 | 307 | 148 | 9 | 27 | 323 | 6 | 254 | 2.37e-26 | 106 |
MS.gene28798.t1 | MTR_5g065160 | 27.095 | 358 | 202 | 9 | 18 | 333 | 75 | 415 | 3.74e-24 | 102 |
MS.gene28798.t1 | MTR_5g065160 | 27.095 | 358 | 202 | 9 | 18 | 333 | 74 | 414 | 4.09e-24 | 102 |
MS.gene28798.t1 | MTR_5g065160 | 27.697 | 343 | 219 | 9 | 18 | 333 | 68 | 408 | 5.81e-24 | 102 |
MS.gene28798.t1 | MTR_5g065160 | 27.697 | 343 | 219 | 9 | 18 | 333 | 75 | 415 | 6.70e-24 | 102 |
MS.gene28798.t1 | MTR_3g437850 | 35.366 | 164 | 81 | 4 | 27 | 165 | 3 | 166 | 1.57e-20 | 87.4 |
MS.gene28798.t1 | MTR_4g015840 | 29.075 | 227 | 124 | 4 | 98 | 323 | 51 | 241 | 7.91e-18 | 82.4 |
MS.gene28798.t1 | MTR_1g110310 | 58.824 | 68 | 28 | 0 | 28 | 95 | 18 | 85 | 1.76e-17 | 83.2 |
MS.gene28798.t1 | MTR_7g069480 | 45.745 | 94 | 49 | 2 | 1 | 93 | 1 | 93 | 1.88e-16 | 80.5 |
MS.gene28798.t1 | MTR_7g101070 | 62.121 | 66 | 24 | 1 | 25 | 89 | 357 | 422 | 2.26e-16 | 80.1 |
MS.gene28798.t1 | MTR_6g471050 | 28.662 | 314 | 168 | 14 | 52 | 320 | 7 | 309 | 3.26e-16 | 79.3 |
MS.gene28798.t1 | MTR_1g052110 | 44.086 | 93 | 48 | 2 | 26 | 118 | 38 | 126 | 1.39e-15 | 76.3 |
MS.gene28798.t1 | MTR_1g029460 | 36.364 | 121 | 70 | 1 | 27 | 147 | 7 | 120 | 1.45e-15 | 77.4 |
MS.gene28798.t1 | MTR_3g437360 | 54.930 | 71 | 31 | 1 | 27 | 96 | 6 | 76 | 1.66e-15 | 76.6 |
MS.gene28798.t1 | MTR_7g092380 | 52.239 | 67 | 32 | 0 | 25 | 91 | 21 | 87 | 2.67e-15 | 75.5 |
MS.gene28798.t1 | MTR_8g037810 | 44.000 | 100 | 49 | 1 | 26 | 125 | 6 | 98 | 6.60e-15 | 75.1 |
MS.gene28798.t1 | MTR_5g012530 | 45.783 | 83 | 42 | 2 | 25 | 104 | 11 | 93 | 1.26e-13 | 72.0 |
MS.gene28798.t1 | MTR_5g004570 | 35.965 | 114 | 66 | 1 | 27 | 140 | 7 | 113 | 1.70e-13 | 69.7 |
MS.gene28798.t1 | MTR_5g035770 | 47.826 | 69 | 36 | 0 | 28 | 96 | 27 | 95 | 3.69e-13 | 70.1 |
MS.gene28798.t1 | MTR_5g065860 | 47.887 | 71 | 36 | 1 | 19 | 88 | 40 | 110 | 4.53e-13 | 66.2 |
MS.gene28798.t1 | MTR_1g105540 | 42.683 | 82 | 45 | 2 | 8 | 88 | 16 | 96 | 4.94e-13 | 68.9 |
MS.gene28798.t1 | MTR_7g112360 | 48.485 | 66 | 30 | 2 | 27 | 88 | 17 | 82 | 5.31e-13 | 65.1 |
MS.gene28798.t1 | MTR_7g112360 | 48.485 | 66 | 30 | 2 | 27 | 88 | 17 | 82 | 1.22e-12 | 65.5 |
MS.gene28798.t1 | MTR_1g029470 | 35.537 | 121 | 71 | 1 | 27 | 147 | 7 | 120 | 4.44e-12 | 66.6 |
MS.gene28798.t1 | MTR_8g022310 | 50.000 | 68 | 28 | 2 | 27 | 88 | 11 | 78 | 4.49e-12 | 65.1 |
MS.gene28798.t1 | MTR_8g081620 | 41.463 | 82 | 44 | 2 | 25 | 104 | 59 | 138 | 4.83e-12 | 64.3 |
MS.gene28798.t1 | MTR_8g022310 | 50.000 | 68 | 28 | 2 | 27 | 88 | 11 | 78 | 5.97e-12 | 64.7 |
MS.gene28798.t1 | MTR_8g022310 | 50.000 | 68 | 28 | 2 | 27 | 88 | 11 | 78 | 6.10e-12 | 64.3 |
MS.gene28798.t1 | MTR_4g023490 | 27.684 | 354 | 204 | 14 | 21 | 333 | 11 | 353 | 6.62e-12 | 66.2 |
MS.gene28798.t1 | MTR_8g022310 | 50.000 | 68 | 28 | 2 | 27 | 88 | 11 | 78 | 7.94e-12 | 64.7 |
MS.gene28798.t1 | MTR_2g044580 | 41.860 | 86 | 47 | 3 | 8 | 91 | 80 | 164 | 1.03e-11 | 66.2 |
MS.gene28798.t1 | MTR_7g069480 | 40.426 | 94 | 48 | 3 | 1 | 93 | 1 | 87 | 8.55e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28798.t1 | AT3G62600 | 79.205 | 327 | 64 | 2 | 1 | 324 | 1 | 326 | 0.0 | 527 |
MS.gene28798.t1 | AT3G08910 | 36.306 | 314 | 165 | 8 | 27 | 323 | 5 | 300 | 8.81e-50 | 169 |
MS.gene28798.t1 | AT5G01390 | 34.268 | 321 | 175 | 8 | 27 | 323 | 5 | 313 | 1.87e-49 | 168 |
MS.gene28798.t1 | AT2G20560 | 33.956 | 321 | 179 | 7 | 27 | 323 | 5 | 316 | 2.33e-47 | 163 |
MS.gene28798.t1 | AT5G25530 | 34.375 | 320 | 182 | 9 | 27 | 324 | 5 | 318 | 1.30e-46 | 161 |
MS.gene28798.t1 | AT5G25530 | 33.537 | 328 | 182 | 10 | 27 | 324 | 5 | 326 | 6.83e-44 | 154 |
MS.gene28798.t1 | AT5G22060 | 36.858 | 331 | 169 | 11 | 27 | 323 | 15 | 339 | 1.19e-43 | 155 |
MS.gene28798.t1 | AT1G59725 | 31.471 | 340 | 156 | 8 | 27 | 324 | 5 | 309 | 2.06e-40 | 144 |
MS.gene28798.t1 | AT1G10350 | 32.012 | 328 | 188 | 6 | 27 | 324 | 5 | 327 | 4.28e-40 | 144 |
MS.gene28798.t1 | AT4G28480 | 32.776 | 299 | 165 | 6 | 27 | 323 | 5 | 269 | 4.89e-39 | 140 |
MS.gene28798.t1 | AT3G44110 | 34.234 | 333 | 174 | 9 | 27 | 323 | 15 | 338 | 3.17e-38 | 141 |
MS.gene28798.t1 | AT5G01390 | 31.949 | 313 | 135 | 6 | 27 | 323 | 5 | 255 | 8.59e-38 | 136 |
MS.gene28798.t1 | AT3G44110 | 34.286 | 315 | 173 | 7 | 27 | 311 | 15 | 325 | 1.54e-36 | 134 |
MS.gene28798.t1 | AT5G48030 | 31.343 | 335 | 196 | 6 | 20 | 323 | 88 | 419 | 2.35e-34 | 131 |
MS.gene28798.t1 | AT2G22360 | 33.742 | 326 | 180 | 13 | 27 | 321 | 87 | 407 | 1.14e-31 | 123 |
MS.gene28798.t1 | AT3G47940 | 31.343 | 335 | 171 | 11 | 27 | 319 | 5 | 322 | 2.91e-30 | 118 |
MS.gene28798.t1 | AT4G39960 | 30.723 | 332 | 189 | 11 | 27 | 321 | 86 | 413 | 8.42e-28 | 113 |
MS.gene28798.t1 | AT4G39960 | 30.723 | 332 | 189 | 11 | 27 | 321 | 86 | 413 | 8.42e-28 | 113 |
MS.gene28798.t1 | AT1G80030 | 30.060 | 336 | 191 | 12 | 27 | 322 | 76 | 407 | 5.80e-27 | 110 |
MS.gene28798.t1 | AT1G80030 | 29.882 | 338 | 193 | 12 | 27 | 324 | 76 | 409 | 6.46e-27 | 110 |
MS.gene28798.t1 | AT1G80030 | 29.882 | 338 | 193 | 12 | 27 | 324 | 76 | 409 | 6.46e-27 | 110 |
MS.gene28798.t1 | AT1G80030 | 29.882 | 338 | 193 | 12 | 27 | 324 | 76 | 409 | 6.46e-27 | 110 |
MS.gene28798.t1 | AT5G01390 | 34.848 | 198 | 96 | 6 | 27 | 201 | 5 | 192 | 1.30e-26 | 105 |
MS.gene28798.t1 | AT5G01390 | 48.148 | 108 | 41 | 2 | 27 | 119 | 5 | 112 | 1.90e-25 | 102 |
MS.gene28798.t1 | AT1G28210 | 25.672 | 335 | 200 | 10 | 23 | 323 | 45 | 364 | 1.52e-19 | 89.0 |
MS.gene28798.t1 | AT1G28210 | 25.672 | 335 | 200 | 10 | 23 | 323 | 45 | 364 | 1.69e-19 | 89.0 |
MS.gene28798.t1 | AT1G28210 | 25.672 | 335 | 200 | 10 | 23 | 323 | 45 | 364 | 1.97e-19 | 89.0 |
MS.gene28798.t1 | AT2G21510 | 45.455 | 99 | 47 | 1 | 27 | 125 | 7 | 98 | 8.37e-18 | 83.6 |
MS.gene28798.t1 | AT2G21510 | 45.455 | 99 | 47 | 1 | 27 | 125 | 7 | 98 | 8.37e-18 | 83.6 |
MS.gene28798.t1 | AT2G21510 | 45.455 | 99 | 47 | 1 | 27 | 125 | 7 | 98 | 9.27e-18 | 83.2 |
MS.gene28798.t1 | AT2G21510 | 45.455 | 99 | 47 | 1 | 27 | 125 | 7 | 98 | 1.10e-17 | 83.2 |
MS.gene28798.t1 | AT2G21510 | 45.455 | 99 | 47 | 1 | 27 | 125 | 7 | 98 | 1.10e-17 | 83.2 |
MS.gene28798.t1 | AT3G17830 | 27.003 | 337 | 191 | 11 | 19 | 309 | 56 | 383 | 1.54e-17 | 84.0 |
MS.gene28798.t1 | AT4G39150 | 41.176 | 119 | 61 | 2 | 27 | 145 | 7 | 116 | 6.97e-17 | 80.9 |
MS.gene28798.t1 | AT4G39150 | 41.176 | 119 | 61 | 2 | 27 | 145 | 7 | 116 | 6.97e-17 | 80.9 |
MS.gene28798.t1 | AT4G39150 | 41.176 | 119 | 61 | 2 | 27 | 145 | 7 | 116 | 6.97e-17 | 80.9 |
MS.gene28798.t1 | AT1G68370 | 57.353 | 68 | 29 | 0 | 28 | 95 | 19 | 86 | 1.01e-16 | 80.9 |
MS.gene28798.t1 | AT1G59980 | 48.529 | 68 | 35 | 0 | 28 | 95 | 25 | 92 | 8.36e-16 | 77.8 |
MS.gene28798.t1 | AT1G59980 | 48.529 | 68 | 35 | 0 | 28 | 95 | 25 | 92 | 1.50e-15 | 77.4 |
MS.gene28798.t1 | AT5G03160 | 56.061 | 66 | 28 | 1 | 25 | 89 | 369 | 434 | 4.20e-15 | 76.3 |
MS.gene28798.t1 | AT2G20550 | 30.114 | 176 | 115 | 4 | 163 | 334 | 106 | 277 | 5.35e-15 | 74.7 |
MS.gene28798.t1 | AT2G20550 | 30.114 | 176 | 115 | 4 | 163 | 334 | 106 | 277 | 5.35e-15 | 74.7 |
MS.gene28798.t1 | AT3G08970 | 57.576 | 66 | 27 | 1 | 28 | 93 | 29 | 93 | 7.60e-15 | 75.9 |
MS.gene28798.t1 | AT3G08970 | 57.576 | 66 | 27 | 1 | 28 | 93 | 29 | 93 | 7.60e-15 | 75.9 |
MS.gene28798.t1 | AT5G05750 | 40.909 | 110 | 51 | 4 | 25 | 123 | 113 | 219 | 1.52e-14 | 73.6 |
MS.gene28798.t1 | AT4G28480 | 30.247 | 162 | 108 | 3 | 163 | 323 | 170 | 327 | 3.34e-14 | 73.2 |
MS.gene28798.t1 | AT1G56300 | 52.239 | 67 | 28 | 2 | 26 | 88 | 13 | 79 | 9.67e-14 | 67.4 |
MS.gene28798.t1 | AT5G16650 | 52.239 | 67 | 32 | 0 | 25 | 91 | 10 | 76 | 1.01e-13 | 67.8 |
MS.gene28798.t1 | AT5G16650 | 52.239 | 67 | 32 | 0 | 25 | 91 | 10 | 76 | 1.20e-13 | 68.6 |
MS.gene28798.t1 | AT1G79940 | 50.769 | 65 | 30 | 2 | 28 | 91 | 101 | 164 | 2.30e-13 | 71.2 |
MS.gene28798.t1 | AT1G56300 | 52.239 | 67 | 28 | 2 | 26 | 88 | 13 | 79 | 2.35e-13 | 67.4 |
MS.gene28798.t1 | AT1G79940 | 50.769 | 65 | 30 | 2 | 28 | 91 | 101 | 164 | 2.52e-13 | 71.2 |
MS.gene28798.t1 | AT1G79940 | 50.769 | 65 | 30 | 2 | 28 | 91 | 101 | 164 | 2.52e-13 | 71.2 |
MS.gene28798.t1 | AT1G79940 | 50.769 | 65 | 30 | 2 | 28 | 91 | 101 | 164 | 2.52e-13 | 71.2 |
MS.gene28798.t1 | AT1G44160 | 27.895 | 190 | 102 | 4 | 147 | 323 | 166 | 333 | 2.57e-13 | 70.5 |
MS.gene28798.t1 | AT4G21180 | 52.308 | 65 | 29 | 2 | 28 | 91 | 101 | 164 | 3.38e-13 | 70.9 |
MS.gene28798.t1 | AT4G21180 | 52.308 | 65 | 29 | 2 | 28 | 91 | 21 | 84 | 3.55e-13 | 70.9 |
MS.gene28798.t1 | AT2G35720 | 50.000 | 74 | 34 | 2 | 25 | 95 | 14 | 87 | 6.10e-13 | 70.1 |
MS.gene28798.t1 | AT1G24120 | 47.059 | 68 | 36 | 0 | 28 | 95 | 22 | 89 | 1.10e-12 | 68.9 |
MS.gene28798.t1 | AT3G57340 | 41.237 | 97 | 48 | 3 | 25 | 115 | 112 | 205 | 2.01e-12 | 67.8 |
MS.gene28798.t1 | AT3G57340 | 41.237 | 97 | 48 | 3 | 25 | 115 | 112 | 205 | 2.01e-12 | 67.8 |
MS.gene28798.t1 | AT2G33735 | 46.154 | 65 | 35 | 0 | 25 | 89 | 21 | 85 | 2.99e-12 | 63.2 |
MS.gene28798.t1 | AT2G33735 | 46.154 | 65 | 35 | 0 | 25 | 89 | 21 | 85 | 2.99e-12 | 63.2 |
MS.gene28798.t1 | AT5G06910 | 45.455 | 66 | 36 | 0 | 26 | 91 | 29 | 94 | 5.63e-12 | 65.9 |
MS.gene28798.t1 | AT4G13830 | 43.939 | 66 | 35 | 1 | 26 | 89 | 66 | 131 | 7.18e-12 | 63.9 |
MS.gene28798.t1 | AT1G71000 | 48.529 | 68 | 31 | 2 | 25 | 88 | 7 | 74 | 8.04e-12 | 63.2 |
MS.gene28798.t1 | AT4G13830 | 43.939 | 66 | 35 | 1 | 26 | 89 | 66 | 131 | 8.09e-12 | 63.2 |
MS.gene28798.t1 | AT3G12170 | 34.906 | 106 | 61 | 2 | 25 | 128 | 10 | 109 | 8.48e-12 | 65.1 |
MS.gene28798.t1 | AT3G12170 | 34.906 | 106 | 61 | 2 | 25 | 128 | 46 | 145 | 8.53e-12 | 65.5 |
MS.gene28798.t1 | AT1G76700 | 38.298 | 94 | 51 | 1 | 27 | 120 | 7 | 93 | 9.23e-12 | 65.9 |
MS.gene28798.t1 | AT1G71000 | 48.529 | 68 | 31 | 2 | 25 | 88 | 7 | 74 | 1.40e-11 | 62.8 |
MS.gene28798.t1 | AT4G13830 | 43.939 | 66 | 35 | 1 | 26 | 89 | 66 | 131 | 2.19e-11 | 62.8 |
MS.gene28798.t1 | AT1G21080 | 36.364 | 99 | 55 | 1 | 27 | 125 | 7 | 97 | 2.23e-11 | 64.7 |
MS.gene28798.t1 | AT1G21080 | 36.364 | 99 | 55 | 1 | 27 | 125 | 7 | 97 | 2.78e-11 | 64.3 |
MS.gene28798.t1 | AT5G49060 | 50.746 | 67 | 28 | 2 | 27 | 91 | 100 | 163 | 3.16e-11 | 64.3 |
MS.gene28798.t1 | AT5G49060 | 50.746 | 67 | 28 | 2 | 27 | 91 | 100 | 163 | 3.16e-11 | 64.3 |
Find 77 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGAGAATCTGGAGATTTA+AGG | 0.175844 | 7.4:-6051293 | MS.gene28798:CDS |
TCCAGATTCTCCATCAATTA+TGG | 0.185165 | 7.4:+6051302 | None:intergenic |
AATGTTTCTTTCAGTTTCTT+TGG | 0.228428 | 7.4:-6054651 | MS.gene28798:intron |
CGACGACGTTATTGTTGATT+TGG | 0.287066 | 7.4:-6054586 | MS.gene28798:CDS |
TTGAACTTCCTTACTTGCTT+TGG | 0.294218 | 7.4:+6050692 | None:intergenic |
AACCCTTGAAGATTTGTATA+TGG | 0.319394 | 7.4:-6054559 | MS.gene28798:CDS |
GTCATTTGTTGAAACATTCC+AGG | 0.330187 | 7.4:+6053796 | None:intergenic |
TTATTAGCTTCTTCATTTCC+CGG | 0.331012 | 7.4:+6055658 | None:intergenic |
TCATTTCCCGGATTCTTATC+AGG | 0.331429 | 7.4:+6055670 | None:intergenic |
CCCATAATTGATGGAGAATC+TGG | 0.346187 | 7.4:-6051303 | MS.gene28798:CDS |
CTTTAGGTTCAAGCTCTTGT+TGG | 0.355874 | 7.4:-6050880 | MS.gene28798:intron |
CCAGATTCTCCATCAATTAT+GGG | 0.369755 | 7.4:+6051303 | None:intergenic |
TGGAGAATCTGGAGATTTAA+GGG | 0.381629 | 7.4:-6051292 | MS.gene28798:intron |
AGAAATATTTATGATAAGTA+TGG | 0.388738 | 7.4:-6055183 | MS.gene28798:CDS |
ACAGAGAAGGAACAACAATT+TGG | 0.396887 | 7.4:+6055902 | None:intergenic |
TAAACACCTTGATGAACATT+TGG | 0.407639 | 7.4:-6050842 | MS.gene28798:CDS |
GAGGTTTATCACAGGCAAAT+CGG | 0.416921 | 7.4:-6053820 | MS.gene28798:CDS |
GTCACTGTTGATATTGAGAA+AGG | 0.417431 | 7.4:-6053417 | MS.gene28798:CDS |
AGCAAGTAAGGAAGTTCAAA+GGG | 0.426789 | 7.4:-6050688 | MS.gene28798:CDS |
CATGCCGCTGGTGGAGGAAG+AGG | 0.435113 | 7.4:-6055141 | MS.gene28798:CDS |
ATGTTCATCAAGGTGTTTAA+CGG | 0.438073 | 7.4:+6050846 | None:intergenic |
AGGTTTATCACAGGCAAATC+GGG | 0.442881 | 7.4:-6053819 | MS.gene28798:CDS |
TCACAAATCCAAAGCAAGTA+AGG | 0.443028 | 7.4:-6050700 | MS.gene28798:CDS |
GTATCATCCTGATAAGAATC+CGG | 0.445522 | 7.4:-6055677 | MS.gene28798:CDS |
TTTCTTTCAGTTTCTTTGGC+GGG | 0.452768 | 7.4:-6054647 | MS.gene28798:intron |
TAAATGTGACCGCACCTTCA+AGG | 0.454412 | 7.4:+6054530 | None:intergenic |
GACGGCGAGCCCATAATTGA+TGG | 0.455291 | 7.4:-6051312 | MS.gene28798:CDS |
CACCCATATACAAATCTTCA+AGG | 0.462023 | 7.4:+6054556 | None:intergenic |
TTCTTTGTGCTCATATGCAA+TGG | 0.465194 | 7.4:+6050656 | None:intergenic |
TATGATAAGTATGGTGAAGA+GGG | 0.468509 | 7.4:-6055174 | MS.gene28798:CDS |
AATGTTGTAAAGCCAGCTCC+TGG | 0.471578 | 7.4:-6053868 | MS.gene28798:CDS |
GTATATGGGTGGTTCCTTGA+AGG | 0.471939 | 7.4:-6054544 | MS.gene28798:intron |
TTCTTTCAGTTTCTTTGGCG+GGG | 0.473982 | 7.4:-6054646 | MS.gene28798:intron |
ACCCTTGAAGATTTGTATAT+GGG | 0.478838 | 7.4:-6054558 | MS.gene28798:CDS |
GAAAGGCATGAAAGATGGCC+AGG | 0.488282 | 7.4:-6053400 | MS.gene28798:intron |
TATCACAGGCAAATCGGGCC+TGG | 0.488499 | 7.4:-6053814 | MS.gene28798:CDS |
AAGCAGCATGCCGCTGGTGG+AGG | 0.488986 | 7.4:-6055147 | MS.gene28798:CDS |
GTTTCTTTCAGTTTCTTTGG+CGG | 0.494548 | 7.4:-6054648 | MS.gene28798:intron |
GTGCTAATGTCAAATACGTA+AGG | 0.495722 | 7.4:-6053452 | MS.gene28798:CDS |
GTTGCTGCTGTCAGCATATG+AGG | 0.502282 | 7.4:-6055226 | MS.gene28798:intron |
AGAAGCTAATAAGAAATTTG+CGG | 0.505990 | 7.4:-6055647 | MS.gene28798:CDS |
TATCATCCTGATAAGAATCC+GGG | 0.516808 | 7.4:-6055676 | MS.gene28798:CDS |
GCCGCTGGTGGAGGAAGAGG+TGG | 0.524267 | 7.4:-6055138 | MS.gene28798:CDS |
GCTGGTGGAGGAAGAGGTGG+TGG | 0.526997 | 7.4:-6055135 | MS.gene28798:CDS |
GTCAGCATATGAGGTATTGT+CGG | 0.527426 | 7.4:-6055217 | MS.gene28798:intron |
TTGAAGCAGCATGCCGCTGG+TGG | 0.528180 | 7.4:-6055150 | MS.gene28798:CDS |
GGTTTGAAGCAGCATGCCGC+TGG | 0.535682 | 7.4:-6055153 | MS.gene28798:CDS |
ATTGTAATTATCAGGTTTGG+AGG | 0.539622 | 7.4:-6053897 | MS.gene28798:intron |
TCTTTCAGTTTCTTTGGCGG+GGG | 0.541453 | 7.4:-6054645 | MS.gene28798:intron |
TTGCATATGAGCACAAAGAA+AGG | 0.546751 | 7.4:-6050653 | MS.gene28798:CDS |
ATTGAGAAAGGCATGAAAGA+TGG | 0.548944 | 7.4:-6053405 | MS.gene28798:CDS |
CTTGAAGATTTGTATATGGG+TGG | 0.550525 | 7.4:-6054555 | MS.gene28798:CDS |
TTGTAATTATCAGGTTTGGA+GGG | 0.555966 | 7.4:-6053896 | MS.gene28798:intron |
AAGCAAGTAAGGAAGTTCAA+AGG | 0.564203 | 7.4:-6050689 | MS.gene28798:CDS |
TTATGATAAGTATGGTGAAG+AGG | 0.574404 | 7.4:-6055175 | MS.gene28798:CDS |
TGTCTACCAAATGTTCATCA+AGG | 0.574433 | 7.4:+6050836 | None:intergenic |
GTTTCAACAAATGACAGAGC+AGG | 0.577760 | 7.4:-6053788 | MS.gene28798:intron |
GTAAGGAAGTTCAAAGGGGA+GGG | 0.585483 | 7.4:-6050683 | MS.gene28798:CDS |
ACGCTGTAACTGTAGAAATG+AGG | 0.598744 | 7.4:-6053839 | MS.gene28798:CDS |
TGCTAATGTCAAATACGTAA+GGG | 0.599841 | 7.4:-6053451 | MS.gene28798:CDS |
TCAAGTGTCGAAAGGTGCAT+CGG | 0.599920 | 7.4:-6055740 | MS.gene28798:CDS |
AATAGCATAGAGCACAGAGA+AGG | 0.608834 | 7.4:+6055889 | None:intergenic |
AGTAAGGAAGTTCAAAGGGG+AGG | 0.612915 | 7.4:-6050684 | MS.gene28798:CDS |
ACCACCTCTTCCTCCACCAG+CGG | 0.613282 | 7.4:+6055137 | None:intergenic |
AAATTTGCGGAGATTAGCAA+TGG | 0.617908 | 7.4:-6055634 | MS.gene28798:intron |
GTAGAAATGAGGTTTATCAC+AGG | 0.618569 | 7.4:-6053828 | MS.gene28798:CDS |
AATGTCAAATACGTAAGGGA+GGG | 0.618582 | 7.4:-6053447 | MS.gene28798:CDS |
AGGTGGTGGAATGAACATGC+AGG | 0.620609 | 7.4:-6055121 | MS.gene28798:CDS |
TTTGAAAAGTTCATGAGGTG+CGG | 0.629074 | 7.4:+6051164 | None:intergenic |
GAAGAAGAGAAAATTGCGAA+AGG | 0.633709 | 7.4:-6054609 | MS.gene28798:CDS |
TAATGTCAAATACGTAAGGG+AGG | 0.634516 | 7.4:-6053448 | MS.gene28798:CDS |
ACCCATATACAAATCTTCAA+GGG | 0.634761 | 7.4:+6054557 | None:intergenic |
GATATACTTCAAGTGTCGAA+AGG | 0.635494 | 7.4:-6055748 | MS.gene28798:CDS |
CACGACTGTCACTATCACGC+TGG | 0.651681 | 7.4:-6051121 | MS.gene28798:intron |
TTTGGTAGACATAAGCTCGA+AGG | 0.653250 | 7.4:-6050824 | MS.gene28798:intron |
AAAGTTCATGAGGTGCGGTG+CGG | 0.717597 | 7.4:+6051169 | None:intergenic |
GCAAGTAAGGAAGTTCAAAG+GGG | 0.733693 | 7.4:-6050687 | MS.gene28798:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAAATAATATATGTTTA+TGG | - | chr7.4:6051284-6051303 | MS.gene28798:intron | 10.0% |
!! | ATATATAAATTAAACATTTC+TGG | + | chr7.4:6052617-6052636 | None:intergenic | 10.0% |
!!! | AATAAAAATAAAGTATCTAT+TGG | + | chr7.4:6055815-6055834 | None:intergenic | 10.0% |
!!! | ATATTTTTATAAGCTATATT+AGG | - | chr7.4:6050830-6050849 | MS.gene28798:CDS | 10.0% |
!!! | TATTTTTATAAGCTATATTA+GGG | - | chr7.4:6050831-6050850 | MS.gene28798:CDS | 10.0% |
!!! | TTTTATTTATGATTTTCTAT+TGG | + | chr7.4:6051964-6051983 | None:intergenic | 10.0% |
!! | AAAATATACATCCTAAAAAA+TGG | + | chr7.4:6052529-6052548 | None:intergenic | 15.0% |
!! | AAGGATAAACATAAAAAATA+CGG | - | chr7.4:6054350-6054369 | MS.gene28798:intron | 15.0% |
!! | AATGACTATATTAAAATTTG+TGG | + | chr7.4:6051433-6051452 | None:intergenic | 15.0% |
!! | ACAAAAATAAAATCAATTCT+TGG | - | chr7.4:6055666-6055685 | MS.gene28798:CDS | 15.0% |
!! | AGAAATATTTATGATAAGTA+TGG | - | chr7.4:6051055-6051074 | MS.gene28798:intron | 15.0% |
!! | ATTATTGTATTGTAATTATC+AGG | - | chr7.4:6052333-6052352 | MS.gene28798:intron | 15.0% |
!! | GTATTTAATTATTTACCAAT+GGG | - | chr7.4:6051768-6051787 | MS.gene28798:intron | 15.0% |
!! | TGTATTTAATTATTTACCAA+TGG | - | chr7.4:6051767-6051786 | MS.gene28798:intron | 15.0% |
!!! | ATTTTTATAAGCTATATTAG+GGG | - | chr7.4:6050832-6050851 | MS.gene28798:CDS | 15.0% |
!!! | CATAAATTTTTGCAAATATT+CGG | + | chr7.4:6052725-6052744 | None:intergenic | 15.0% |
!!! | GATATAAATTAAGTTTGTTT+TGG | + | chr7.4:6054304-6054323 | None:intergenic | 15.0% |
!!! | TTTCCTTTAAAAAAAAAACA+AGG | + | chr7.4:6054639-6054658 | None:intergenic | 15.0% |
!! | AACCATTAATAACCAAAATA+AGG | + | chr7.4:6050982-6051001 | None:intergenic | 20.0% |
!! | AATATTTATTTACCCTGATA+GGG | - | chr7.4:6053211-6053230 | MS.gene28798:intron | 20.0% |
!! | ACATTTCAGATATGTATTAT+CGG | - | chr7.4:6051211-6051230 | MS.gene28798:intron | 20.0% |
!! | ACCATTAATAACCAAAATAA+GGG | + | chr7.4:6050981-6051000 | None:intergenic | 20.0% |
!! | AGTGAAAATGTTTACTTATA+AGG | - | chr7.4:6050801-6050820 | MS.gene28798:intron | 20.0% |
!! | ATTGGTTAACTAACAAAAAA+TGG | + | chr7.4:6055797-6055816 | None:intergenic | 20.0% |
!! | GTCATTTAAATCTAAATCTT+AGG | + | chr7.4:6054430-6054449 | None:intergenic | 20.0% |
!! | TAATATTTATTTACCCTGAT+AGG | - | chr7.4:6053210-6053229 | MS.gene28798:intron | 20.0% |
!! | TACATAAACACTTATATGAT+AGG | + | chr7.4:6050749-6050768 | None:intergenic | 20.0% |
!! | TGAAAGAAACATTCATATTT+CGG | + | chr7.4:6051580-6051599 | None:intergenic | 20.0% |
!! | TGAATAATATACTAGTAGAT+GGG | - | chr7.4:6051855-6051874 | MS.gene28798:intron | 20.0% |
!! | TGTCTTAGAAAAACTATATA+TGG | - | chr7.4:6053387-6053406 | MS.gene28798:intron | 20.0% |
!! | TTGAATAATATACTAGTAGA+TGG | - | chr7.4:6051854-6051873 | MS.gene28798:intron | 20.0% |
!! | TTGGTTAACTAACAAAAAAT+GGG | + | chr7.4:6055796-6055815 | None:intergenic | 20.0% |
!! | TTTGCTTATAAATCTATGTT+TGG | - | chr7.4:6050447-6050466 | MS.gene28798:intron | 20.0% |
!!! | AACTTTTAAAGTTTGTATGT+AGG | - | chr7.4:6052863-6052882 | MS.gene28798:intron | 20.0% |
!!! | AATATCTGAGATTTATCAAA+AGG | + | chr7.4:6052107-6052126 | None:intergenic | 20.0% |
!!! | ATATCTGAGATTTATCAAAA+GGG | + | chr7.4:6052106-6052125 | None:intergenic | 20.0% |
!!! | CCAAAAAATTCATGTTATTT+TGG | - | chr7.4:6054165-6054184 | MS.gene28798:intron | 20.0% |
!!! | CCAAAATAACATGAATTTTT+TGG | + | chr7.4:6054168-6054187 | None:intergenic | 20.0% |
!!! | GATCCTTGTTTTTTTTTTAA+AGG | - | chr7.4:6054633-6054652 | MS.gene28798:CDS | 20.0% |
!!! | GTTTTGGTCAAAAAAAAAAA+TGG | + | chr7.4:6054288-6054307 | None:intergenic | 20.0% |
!!! | TACTTTATTTTTACTTGCAT+TGG | - | chr7.4:6051239-6051258 | MS.gene28798:intron | 20.0% |
!!! | TATTAGAAGAGATTTTTGAA+GGG | - | chr7.4:6053983-6054002 | MS.gene28798:intron | 20.0% |
!!! | TGTATGCTAATTTTTAGTAT+GGG | - | chr7.4:6051527-6051546 | MS.gene28798:intron | 20.0% |
!!! | TTGTATGCTAATTTTTAGTA+TGG | - | chr7.4:6051526-6051545 | MS.gene28798:intron | 20.0% |
!!! | TTTATTCTTGTCCATTTTTT+AGG | - | chr7.4:6052515-6052534 | MS.gene28798:intron | 20.0% |
!!! | TTTTTATAAGCTATATTAGG+GGG | - | chr7.4:6050833-6050852 | MS.gene28798:CDS | 20.0% |
! | AAAAATGGACAAGAATAAAC+AGG | + | chr7.4:6052514-6052533 | None:intergenic | 25.0% |
! | AAACAATGTTCAATACAAGA+AGG | - | chr7.4:6054331-6054350 | MS.gene28798:intron | 25.0% |
! | AAACTGTTCATATTAGCATA+TGG | + | chr7.4:6055044-6055063 | None:intergenic | 25.0% |
! | AATCTTAGGTGAAGTTTATT+AGG | + | chr7.4:6054416-6054435 | None:intergenic | 25.0% |
! | AATGTTTCTTTCAGTTTCTT+TGG | - | chr7.4:6051587-6051606 | MS.gene28798:intron | 25.0% |
! | AGAAGCTAATAAGAAATTTG+CGG | - | chr7.4:6050591-6050610 | MS.gene28798:intron | 25.0% |
! | AGGAAAACAGAAAAATTACA+CGG | + | chr7.4:6050390-6050409 | None:intergenic | 25.0% |
! | ATTATCACACTAACTGTAAT+CGG | - | chr7.4:6051345-6051364 | MS.gene28798:intron | 25.0% |
! | CTTGACTAATTGAATGTTTA+TGG | - | chr7.4:6054864-6054883 | MS.gene28798:intron | 25.0% |
! | GAATCAATAAAACCATATGA+AGG | + | chr7.4:6051373-6051392 | None:intergenic | 25.0% |
! | TGGTTAACTAACAAAAAATG+GGG | + | chr7.4:6055795-6055814 | None:intergenic | 25.0% |
! | TGTATTGTAATTATCAGGTT+TGG | - | chr7.4:6052338-6052357 | MS.gene28798:intron | 25.0% |
! | TTTAATACTTACTACAACAG+TGG | + | chr7.4:6055226-6055245 | None:intergenic | 25.0% |
!! | AACTAATTTTCAGCTTAAAC+AGG | + | chr7.4:6054586-6054605 | None:intergenic | 25.0% |
!! | AATACATATCTGAAATGTGA+TGG | + | chr7.4:6051209-6051228 | None:intergenic | 25.0% |
!! | ACAAACTTTAAAAGTTTACC+TGG | + | chr7.4:6052859-6052878 | None:intergenic | 25.0% |
!! | CATTTGCTAACAAAAATGAA+AGG | + | chr7.4:6054982-6055001 | None:intergenic | 25.0% |
!! | CTATTAGAAGAGATTTTTGA+AGG | - | chr7.4:6053982-6054001 | MS.gene28798:intron | 25.0% |
!! | GTATTTTCATTGAGAAAATC+AGG | - | chr7.4:6052156-6052175 | MS.gene28798:intron | 25.0% |
!! | TTTTATAAGCTATATTAGGG+GGG | - | chr7.4:6050834-6050853 | MS.gene28798:CDS | 25.0% |
!!! | ATATAGTTTTTCTAAGACAC+TGG | + | chr7.4:6053386-6053405 | None:intergenic | 25.0% |
!!! | ATTAAGTTGAAAACAGCTTA+TGG | - | chr7.4:6050864-6050883 | MS.gene28798:CDS | 25.0% |
!!! | GAGTGTTTTTTTGTTTTGAA+TGG | - | chr7.4:6053653-6053672 | MS.gene28798:intron | 25.0% |
!!! | GTATGCTAATTTTTAGTATG+GGG | - | chr7.4:6051528-6051547 | MS.gene28798:intron | 25.0% |
!!! | TCCCTTATTTTGGTTATTAA+TGG | - | chr7.4:6050977-6050996 | MS.gene28798:intron | 25.0% |
!!! | TTGTTTTGAATGGAGTATTA+TGG | - | chr7.4:6053663-6053682 | MS.gene28798:intron | 25.0% |
AAAGATGGAAAATGGATCAA+GGG | + | chr7.4:6054754-6054773 | None:intergenic | 30.0% | |
AACCCTTGAAGATTTGTATA+TGG | - | chr7.4:6051679-6051698 | MS.gene28798:intron | 30.0% | |
AACTAAGAAGAACTGCTTTA+GGG | - | chr7.4:6052019-6052038 | MS.gene28798:intron | 30.0% | |
AATACAAAATCCCCCTAATT+TGG | - | chr7.4:6053946-6053965 | MS.gene28798:intron | 30.0% | |
AATATACTAGTAGATGGGTA+TGG | - | chr7.4:6051860-6051879 | MS.gene28798:intron | 30.0% | |
ACCCATATACAAATCTTCAA+GGG | + | chr7.4:6051684-6051703 | None:intergenic | 30.0% | |
ACCCTTGAAGATTTGTATAT+GGG | - | chr7.4:6051680-6051699 | MS.gene28798:intron | 30.0% | |
ACTTATTCGAAATTATCGAG+TGG | + | chr7.4:6050945-6050964 | None:intergenic | 30.0% | |
AGGGACAAAAGAAATATGTT+AGG | + | chr7.4:6055511-6055530 | None:intergenic | 30.0% | |
ATACAAAATCCCCCTAATTT+GGG | - | chr7.4:6053947-6053966 | MS.gene28798:intron | 30.0% | |
ATATACTAGTAGATGGGTAT+GGG | - | chr7.4:6051861-6051880 | MS.gene28798:intron | 30.0% | |
ATCAAAATAGCACCACAATA+AGG | + | chr7.4:6055883-6055902 | None:intergenic | 30.0% | |
ATTATGTTGTCATGTGTAAG+TGG | - | chr7.4:6051468-6051487 | MS.gene28798:intron | 30.0% | |
ATTGTAATTATCAGGTTTGG+AGG | - | chr7.4:6052341-6052360 | MS.gene28798:intron | 30.0% | |
CCACTATTCATGTATTATCA+TGG | - | chr7.4:6052190-6052209 | MS.gene28798:intron | 30.0% | |
CCATGATAATACATGAATAG+TGG | + | chr7.4:6052193-6052212 | None:intergenic | 30.0% | |
CTAAGAAAAGCAGTTATAGA+AGG | - | chr7.4:6051307-6051326 | MS.gene28798:CDS | 30.0% | |
CTTAAAAGCTAGCTATCAAA+GGG | + | chr7.4:6053305-6053324 | None:intergenic | 30.0% | |
GACATTTCATTGTATGATTG+TGG | - | chr7.4:6052588-6052607 | MS.gene28798:intron | 30.0% | |
GGTTAACTAACAAAAAATGG+GGG | + | chr7.4:6055794-6055813 | None:intergenic | 30.0% | |
GTATTAAACAGTAACTAGCA+TGG | - | chr7.4:6055238-6055257 | MS.gene28798:intron | 30.0% | |
GTTAAGAACTAATCAAGCAA+AGG | + | chr7.4:6051173-6051192 | None:intergenic | 30.0% | |
TAAAAATTGATGCAGACATG+AGG | + | chr7.4:6051405-6051424 | None:intergenic | 30.0% | |
TAAACACCTTGATGAACATT+TGG | - | chr7.4:6055396-6055415 | MS.gene28798:intron | 30.0% | |
TAGACATGCTTATAAGTGTA+GGG | + | chr7.4:6052948-6052967 | None:intergenic | 30.0% | |
TATGATAAGTATGGTGAAGA+GGG | - | chr7.4:6051064-6051083 | MS.gene28798:intron | 30.0% | |
TGCTAATGTCAAATACGTAA+GGG | - | chr7.4:6052787-6052806 | MS.gene28798:intron | 30.0% | |
TGTGAATCATGTCAAATGAT+AGG | + | chr7.4:6054452-6054471 | None:intergenic | 30.0% | |
TTAAAAGCTAGCTATCAAAG+GGG | + | chr7.4:6053304-6053323 | None:intergenic | 30.0% | |
TTAGACATGCTTATAAGTGT+AGG | + | chr7.4:6052949-6052968 | None:intergenic | 30.0% | |
TTATGATAAGTATGGTGAAG+AGG | - | chr7.4:6051063-6051082 | MS.gene28798:intron | 30.0% | |
TTCTTGGTTAGAATACATTC+AGG | - | chr7.4:6055682-6055701 | MS.gene28798:CDS | 30.0% | |
TTGTAATTATCAGGTTTGGA+GGG | - | chr7.4:6052342-6052361 | MS.gene28798:intron | 30.0% | |
TTTAGTTGTACCTTACCTTT+CGG | - | chr7.4:6055161-6055180 | MS.gene28798:CDS | 30.0% | |
TTTCACTCCTCTATATTACT+TGG | + | chr7.4:6054692-6054711 | None:intergenic | 30.0% | |
TTTCGAGAAACGGTAATAAA+AGG | + | chr7.4:6050410-6050429 | None:intergenic | 30.0% | |
! | AATAACACTTTGAGAATGGT+TGG | + | chr7.4:6054781-6054800 | None:intergenic | 30.0% |
! | ACCTCATGAACTTTTCAAAA+GGG | - | chr7.4:6055078-6055097 | MS.gene28798:intron | 30.0% |
! | AGGTGTGTTTCAATGTTTTT+GGG | + | chr7.4:6055491-6055510 | None:intergenic | 30.0% |
! | ATGTGATGGTGTTAACTTAT+AGG | + | chr7.4:6051195-6051214 | None:intergenic | 30.0% |
! | ATGTTCATCAAGGTGTTTAA+CGG | + | chr7.4:6055395-6055414 | None:intergenic | 30.0% |
! | GCAAAATAACACTTTGAGAA+TGG | + | chr7.4:6054785-6054804 | None:intergenic | 30.0% |
! | TAGGTGTGTTTCAATGTTTT+TGG | + | chr7.4:6055492-6055511 | None:intergenic | 30.0% |
! | TTATTAGCTTCTTCATTTCC+CGG | + | chr7.4:6050583-6050602 | None:intergenic | 30.0% |
!! | ATACAAACAGTCCCTTATTT+TGG | - | chr7.4:6050967-6050986 | MS.gene28798:intron | 30.0% |
!! | TCAACAACATTTTCGAGAAA+CGG | + | chr7.4:6050420-6050439 | None:intergenic | 30.0% |
!! | TTAAGAGAAGTGCTATGATA+GGG | - | chr7.4:6053471-6053490 | MS.gene28798:intron | 30.0% |
!!! | AATTTTTTGGCTCAAGCTAA+AGG | + | chr7.4:6054155-6054174 | None:intergenic | 30.0% |
!!! | ATTTTGAGTTTCCCCAAATT+AGG | + | chr7.4:6053962-6053981 | None:intergenic | 30.0% |
!!! | CTTTGATAGCTAGCTTTTAA+GGG | - | chr7.4:6053304-6053323 | MS.gene28798:intron | 30.0% |
!!! | TAATTTTTAGTATGGGGTTC+TGG | - | chr7.4:6051534-6051553 | MS.gene28798:intron | 30.0% |
!!! | TTTTGAGTTTCCCCAAATTA+GGG | + | chr7.4:6053961-6053980 | None:intergenic | 30.0% |
!!! | TTTTTTCCTTATGTGCTTGA+GGG | - | chr7.4:6052665-6052684 | MS.gene28798:intron | 30.0% |
AAAGGCTCTATTTGGGAATT+TGG | + | chr7.4:6054137-6054156 | None:intergenic | 35.0% | |
AAATTTGCGGAGATTAGCAA+TGG | - | chr7.4:6050604-6050623 | MS.gene28798:intron | 35.0% | |
AACTAATCAAGCAAAGGCTA+AGG | + | chr7.4:6051167-6051186 | None:intergenic | 35.0% | |
AAGCAAGTAAGGAAGTTCAA+AGG | - | chr7.4:6055549-6055568 | MS.gene28798:intron | 35.0% | |
AATGTCAAATACGTAAGGGA+GGG | - | chr7.4:6052791-6052810 | MS.gene28798:intron | 35.0% | |
ACACCCTTAAAATTGAAGCT+AGG | + | chr7.4:6054562-6054581 | None:intergenic | 35.0% | |
ACAGAAAAATTACACGGCAA+TGG | + | chr7.4:6050384-6050403 | None:intergenic | 35.0% | |
ACAGAGAAGGAACAACAATT+TGG | + | chr7.4:6050339-6050358 | None:intergenic | 35.0% | |
ACTAAGAAGAACTGCTTTAG+GGG | - | chr7.4:6052020-6052039 | MS.gene28798:intron | 35.0% | |
ACTTGCGAATTCTACACTTT+GGG | + | chr7.4:6052290-6052309 | None:intergenic | 35.0% | |
AGCAAGTAAGGAAGTTCAAA+GGG | - | chr7.4:6055550-6055569 | MS.gene28798:intron | 35.0% | |
AGCAGTTATAGAAGGCTATT+AGG | - | chr7.4:6051315-6051334 | MS.gene28798:CDS | 35.0% | |
AGTGTTATCCAAAATCCGAA+AGG | + | chr7.4:6055179-6055198 | None:intergenic | 35.0% | |
ATGATAGGGACTTGCATATT+AGG | - | chr7.4:6053485-6053504 | MS.gene28798:intron | 35.0% | |
ATGGAGAATCTGGAGATTTA+AGG | - | chr7.4:6054945-6054964 | MS.gene28798:intron | 35.0% | |
CAACTAAGAAGAACTGCTTT+AGG | - | chr7.4:6052018-6052037 | MS.gene28798:intron | 35.0% | |
CAATTAGTCAAGTTTCGACT+TGG | + | chr7.4:6054856-6054875 | None:intergenic | 35.0% | |
CACCCATATACAAATCTTCA+AGG | + | chr7.4:6051685-6051704 | None:intergenic | 35.0% | |
CACCTAATCATGTTACATTG+AGG | + | chr7.4:6055733-6055752 | None:intergenic | 35.0% | |
CAGTGGTTCTTACTACTTTA+GGG | - | chr7.4:6053828-6053847 | MS.gene28798:CDS | 35.0% | |
CCAGATTCTCCATCAATTAT+GGG | + | chr7.4:6054938-6054957 | None:intergenic | 35.0% | |
CCTTAAAAGCTAGCTATCAA+AGG | + | chr7.4:6053306-6053325 | None:intergenic | 35.0% | |
CGTACAATAAACCAAATGGT+GGG | + | chr7.4:6053560-6053579 | None:intergenic | 35.0% | |
CTAACTCTATCAAATGGGAA+AGG | - | chr7.4:6054505-6054524 | MS.gene28798:intron | 35.0% | |
CTATGTTCTTGATGTGTATG+GGG | - | chr7.4:6051495-6051514 | MS.gene28798:intron | 35.0% | |
CTCAATGTAACATGATTAGG+TGG | - | chr7.4:6055731-6055750 | MS.gene28798:CDS | 35.0% | |
CTTGAAGATTTGTATATGGG+TGG | - | chr7.4:6051683-6051702 | MS.gene28798:intron | 35.0% | |
GAAAGATGGAAAATGGATCA+AGG | + | chr7.4:6054755-6054774 | None:intergenic | 35.0% | |
GAAGAAGAGAAAATTGCGAA+AGG | - | chr7.4:6051629-6051648 | MS.gene28798:intron | 35.0% | |
GACACATATATGTTACCCAT+TGG | + | chr7.4:6051786-6051805 | None:intergenic | 35.0% | |
GCACATAAGGAAAAAAGACA+AGG | + | chr7.4:6052661-6052680 | None:intergenic | 35.0% | |
GCAGTTATAGAAGGCTATTA+GGG | - | chr7.4:6051316-6051335 | MS.gene28798:CDS | 35.0% | |
GCTATGTTCTTGATGTGTAT+GGG | - | chr7.4:6051494-6051513 | MS.gene28798:intron | 35.0% | |
GGAAATAAAGAATAGCCTCT+GGG | + | chr7.4:6052085-6052104 | None:intergenic | 35.0% | |
GTAGAAATGAGGTTTATCAC+AGG | - | chr7.4:6052410-6052429 | MS.gene28798:intron | 35.0% | |
GTATCATCCTGATAAGAATC+CGG | - | chr7.4:6050561-6050580 | MS.gene28798:intron | 35.0% | |
GTCACTGTTGATATTGAGAA+AGG | - | chr7.4:6052821-6052840 | MS.gene28798:intron | 35.0% | |
GTCCTCAATGTAACATGATT+AGG | - | chr7.4:6055728-6055747 | MS.gene28798:CDS | 35.0% | |
GTGCTAATGTCAAATACGTA+AGG | - | chr7.4:6052786-6052805 | MS.gene28798:intron | 35.0% | |
GTGTAGGGCTTATAAGAAAA+TGG | + | chr7.4:6052933-6052952 | None:intergenic | 35.0% | |
GTTTCTTTCAGTTTCTTTGG+CGG | - | chr7.4:6051590-6051609 | MS.gene28798:intron | 35.0% | |
TAATGTCAAATACGTAAGGG+AGG | - | chr7.4:6052790-6052809 | MS.gene28798:intron | 35.0% | |
TACAAAATCCCCCTAATTTG+GGG | - | chr7.4:6053948-6053967 | MS.gene28798:intron | 35.0% | |
TATCATCCTGATAAGAATCC+GGG | - | chr7.4:6050562-6050581 | MS.gene28798:intron | 35.0% | |
TATCCAAAATCCGAAAGGTA+AGG | + | chr7.4:6055174-6055193 | None:intergenic | 35.0% | |
TCAAGCTAAAGGCTCTATTT+GGG | + | chr7.4:6054144-6054163 | None:intergenic | 35.0% | |
TCACAAATCCAAAGCAAGTA+AGG | - | chr7.4:6055538-6055557 | MS.gene28798:intron | 35.0% | |
TCAGTGGTTCTTACTACTTT+AGG | - | chr7.4:6053827-6053846 | MS.gene28798:CDS | 35.0% | |
TCCAGATTCTCCATCAATTA+TGG | + | chr7.4:6054939-6054958 | None:intergenic | 35.0% | |
TCTTCTTTGCTGCTCTTAAT+TGG | - | chr7.4:6055450-6055469 | MS.gene28798:intron | 35.0% | |
TCTTGTGTAAAAAGAGGGTA+AGG | + | chr7.4:6053586-6053605 | None:intergenic | 35.0% | |
TGAAGTTTATTAGGCGACAA+GGG | + | chr7.4:6054407-6054426 | None:intergenic | 35.0% | |
TGATAGGGACTTGCATATTA+GGG | - | chr7.4:6053486-6053505 | MS.gene28798:intron | 35.0% | |
TGCAGCTAACTCTATCAAAT+GGG | - | chr7.4:6054500-6054519 | MS.gene28798:intron | 35.0% | |
TGCTATGTTCTTGATGTGTA+TGG | - | chr7.4:6051493-6051512 | MS.gene28798:intron | 35.0% | |
TGGAGAATCTGGAGATTTAA+GGG | - | chr7.4:6054946-6054965 | MS.gene28798:intron | 35.0% | |
TGGTGTAGTTGTAAACTAAG+TGG | - | chr7.4:6052210-6052229 | MS.gene28798:intron | 35.0% | |
TGTCTACCAAATGTTCATCA+AGG | + | chr7.4:6055405-6055424 | None:intergenic | 35.0% | |
TTACAACAAATACACGCCTT+AGG | - | chr7.4:6055761-6055780 | MS.gene28798:CDS | 35.0% | |
TTCTTTGTGCTCATATGCAA+TGG | + | chr7.4:6055585-6055604 | None:intergenic | 35.0% | |
TTGAACTTCCTTACTTGCTT+TGG | + | chr7.4:6055549-6055568 | None:intergenic | 35.0% | |
TTGCAGCTAACTCTATCAAA+TGG | - | chr7.4:6054499-6054518 | MS.gene28798:intron | 35.0% | |
TTGCATATGAGCACAAAGAA+AGG | - | chr7.4:6055585-6055604 | MS.gene28798:intron | 35.0% | |
TTGGTGAGAAAGATGGAAAA+TGG | + | chr7.4:6054762-6054781 | None:intergenic | 35.0% | |
TTTCCAGGACTTGCATATTA+TGG | - | chr7.4:6053631-6053650 | MS.gene28798:intron | 35.0% | |
TTTCTTTCAGTTTCTTTGGC+GGG | - | chr7.4:6051591-6051610 | MS.gene28798:intron | 35.0% | |
TTTGAAAAGTTCATGAGGTG+CGG | + | chr7.4:6055077-6055096 | None:intergenic | 35.0% | |
! | AAATTTTCTCAGCTGATCAG+TGG | - | chr7.4:6054249-6054268 | MS.gene28798:intron | 35.0% |
! | ACACTTGTTGATTGTGCAAA+CGG | - | chr7.4:6055276-6055295 | MS.gene28798:intron | 35.0% |
! | ACATATTTCTTTTGTCCCTC+AGG | - | chr7.4:6055512-6055531 | MS.gene28798:intron | 35.0% |
! | ACGACCTAGCTTCAATTTTA+AGG | - | chr7.4:6054555-6054574 | MS.gene28798:CDS | 35.0% |
! | ATTGAGAAAGGCATGAAAGA+TGG | - | chr7.4:6052833-6052852 | MS.gene28798:intron | 35.0% |
! | CACCTCATGAACTTTTCAAA+AGG | - | chr7.4:6055077-6055096 | MS.gene28798:intron | 35.0% |
! | CATATTTCTTTTGTCCCTCA+GGG | - | chr7.4:6055513-6055532 | MS.gene28798:intron | 35.0% |
! | CATGAACTTTTCAAAAGGGA+AGG | - | chr7.4:6055082-6055101 | MS.gene28798:intron | 35.0% |
! | CCTCTATATTACTTGGTAGT+CGG | + | chr7.4:6054685-6054704 | None:intergenic | 35.0% |
! | CGACCTAGCTTCAATTTTAA+GGG | - | chr7.4:6054556-6054575 | MS.gene28798:CDS | 35.0% |
! | GTCATTTGTTGAAACATTCC+AGG | + | chr7.4:6052445-6052464 | None:intergenic | 35.0% |
! | TGTGGCATATTCAAAGCTTT+TGG | + | chr7.4:6054716-6054735 | None:intergenic | 35.0% |
! | TTACCCTCTTTTTACACAAG+AGG | - | chr7.4:6053585-6053604 | MS.gene28798:intron | 35.0% |
! | TTTGAGTTTCCCCAAATTAG+GGG | + | chr7.4:6053960-6053979 | None:intergenic | 35.0% |
! | TTTTTCCTTATGTGCTTGAG+GGG | - | chr7.4:6052666-6052685 | MS.gene28798:intron | 35.0% |
!! | CTTAAGAGAAGTGCTATGAT+AGG | - | chr7.4:6053470-6053489 | MS.gene28798:intron | 35.0% |
!! | GATATACTTCAAGTGTCGAA+AGG | - | chr7.4:6050490-6050509 | MS.gene28798:intron | 35.0% |
!! | GGTGTGTTTCAATGTTTTTG+GGG | + | chr7.4:6055490-6055509 | None:intergenic | 35.0% |
!! | TACTACTTTAGGGTCTGTTT+GGG | - | chr7.4:6053838-6053857 | MS.gene28798:CDS | 35.0% |
!! | TCCCTTTTGAAAAGTTCATG+AGG | + | chr7.4:6055082-6055101 | None:intergenic | 35.0% |
!! | TTACTACTTTAGGGTCTGTT+TGG | - | chr7.4:6053837-6053856 | MS.gene28798:CDS | 35.0% |
!!! | AGATCTTTACGTCACTTTTG+AGG | - | chr7.4:6055608-6055627 | MS.gene28798:intron | 35.0% |
!!! | ATTTTTTGTCCTTTCACAGG+AGG | - | chr7.4:6054889-6054908 | MS.gene28798:intron | 35.0% |
!!! | CCTTTGATAGCTAGCTTTTA+AGG | - | chr7.4:6053303-6053322 | MS.gene28798:intron | 35.0% |
!!! | CTTTTTTCCTTATGTGCTTG+AGG | - | chr7.4:6052664-6052683 | MS.gene28798:intron | 35.0% |
!!! | GCAATTTTTTGTCCTTTCAC+AGG | - | chr7.4:6054886-6054905 | MS.gene28798:intron | 35.0% |
!!! | TGCTTGTTTTAGTCCTTAAG+TGG | - | chr7.4:6053718-6053737 | MS.gene28798:intron | 35.0% |
!!! | TGTGGTGCTATTTTGATACA+AGG | - | chr7.4:6055886-6055905 | MS.gene28798:CDS | 35.0% |
!!! | TGTTTCAATGTTTTTGGGGT+GGG | + | chr7.4:6055486-6055505 | None:intergenic | 35.0% |
AAAATAGCACCTCCTGTGAA+AGG | + | chr7.4:6054901-6054920 | None:intergenic | 40.0% | |
AAGCTATATTAGGGGGGTTA+TGG | - | chr7.4:6050840-6050859 | MS.gene28798:CDS | 40.0% | |
AATAGCATAGAGCACAGAGA+AGG | + | chr7.4:6050352-6050371 | None:intergenic | 40.0% | |
AATATGCAAGTCCTGGAAAC+AGG | + | chr7.4:6053630-6053649 | None:intergenic | 40.0% | |
ACAGCCTCTTGTGTAAAAAG+AGG | + | chr7.4:6053592-6053611 | None:intergenic | 40.0% | |
ACGCTGTAACTGTAGAAATG+AGG | - | chr7.4:6052399-6052418 | MS.gene28798:intron | 40.0% | |
ACTCCATAATATGCAAGTCC+TGG | + | chr7.4:6053637-6053656 | None:intergenic | 40.0% | |
AGACTGCTTGAAAGAGCTTA+TGG | + | chr7.4:6050908-6050927 | None:intergenic | 40.0% | |
AGCTATGCATATGGTCATCT+GGG | + | chr7.4:6053808-6053827 | None:intergenic | 40.0% | |
AGGTTTATCACAGGCAAATC+GGG | - | chr7.4:6052419-6052438 | MS.gene28798:intron | 40.0% | |
AGTAACTAGCATGGAAGAGT+TGG | - | chr7.4:6055247-6055266 | MS.gene28798:intron | 40.0% | |
AGTGCTTATGAAATGGTACC+TGG | - | chr7.4:6053352-6053371 | MS.gene28798:intron | 40.0% | |
ATATGCAAGTCCTGGAAACA+GGG | + | chr7.4:6053629-6053648 | None:intergenic | 40.0% | |
ATATGGAAGAGACACCAGAA+AGG | - | chr7.4:6053404-6053423 | MS.gene28798:CDS | 40.0% | |
ATGCGATGCTCTAATTAGCT+TGG | - | chr7.4:6053274-6053293 | MS.gene28798:intron | 40.0% | |
ATTTGGGAATTTGGAGGGAA+GGG | + | chr7.4:6054128-6054147 | None:intergenic | 40.0% | |
CAACAAGAGCTTGAACCTAA+AGG | + | chr7.4:6055360-6055379 | None:intergenic | 40.0% | |
CACGCTGGTAAGTATAATCA+TGG | - | chr7.4:6055132-6055151 | MS.gene28798:CDS | 40.0% | |
CAGCCTCTTGTGTAAAAAGA+GGG | + | chr7.4:6053591-6053610 | None:intergenic | 40.0% | |
CCCATAATTGATGGAGAATC+TGG | - | chr7.4:6054935-6054954 | MS.gene28798:intron | 40.0% | |
CCGACTACCAAGTAATATAG+AGG | - | chr7.4:6054682-6054701 | MS.gene28798:intron | 40.0% | |
CTCAAGCTAAAGGCTCTATT+TGG | + | chr7.4:6054145-6054164 | None:intergenic | 40.0% | |
CTGTAATCGGAACCTTCATA+TGG | - | chr7.4:6051358-6051377 | MS.gene28798:intron | 40.0% | |
CTTGAACCTAAAGGAGATCA+AGG | + | chr7.4:6055351-6055370 | None:intergenic | 40.0% | |
GACTTGCGAATTCTACACTT+TGG | + | chr7.4:6052291-6052310 | None:intergenic | 40.0% | |
GAGGTTTATCACAGGCAAAT+CGG | - | chr7.4:6052418-6052437 | MS.gene28798:intron | 40.0% | |
GCAAGTAAGGAAGTTCAAAG+GGG | - | chr7.4:6055551-6055570 | MS.gene28798:intron | 40.0% | |
GCAGGTAAATATCATCTTCG+AGG | - | chr7.4:6052468-6052487 | MS.gene28798:intron | 40.0% | |
GCGTACAATAAACCAAATGG+TGG | + | chr7.4:6053561-6053580 | None:intergenic | 40.0% | |
GCTCTATTTGGGAATTTGGA+GGG | + | chr7.4:6054133-6054152 | None:intergenic | 40.0% | |
GCTGCGTACAATAAACCAAA+TGG | + | chr7.4:6053564-6053583 | None:intergenic | 40.0% | |
GGGAAATAAAGAATAGCCTC+TGG | + | chr7.4:6052086-6052105 | None:intergenic | 40.0% | |
GGGTAAAAAAGAAAGCAGTG+TGG | + | chr7.4:6054734-6054753 | None:intergenic | 40.0% | |
GTGAAGTTTATTAGGCGACA+AGG | + | chr7.4:6054408-6054427 | None:intergenic | 40.0% | |
GTGCTTATGAAATGGTACCT+GGG | - | chr7.4:6053353-6053372 | MS.gene28798:intron | 40.0% | |
GTGCTTGAGTGCTTATGAAA+TGG | - | chr7.4:6053345-6053364 | MS.gene28798:intron | 40.0% | |
GTGTAACCTTGATCTCCTTT+AGG | - | chr7.4:6055342-6055361 | MS.gene28798:intron | 40.0% | |
GTTTCAACAAATGACAGAGC+AGG | - | chr7.4:6052450-6052469 | MS.gene28798:intron | 40.0% | |
TAATAGCCAAGTCCCTATCA+GGG | + | chr7.4:6053226-6053245 | None:intergenic | 40.0% | |
TAGAAGCCAGTGTATTTGCA+GGG | + | chr7.4:6052553-6052572 | None:intergenic | 40.0% | |
TAGATTCGCGACTATCATAC+TGG | - | chr7.4:6051885-6051904 | MS.gene28798:intron | 40.0% | |
TAGCACATTGATCACAAACC+TGG | + | chr7.4:6052772-6052791 | None:intergenic | 40.0% | |
TATTTACCCTGATAGGGACT+TGG | - | chr7.4:6053217-6053236 | MS.gene28798:intron | 40.0% | |
TATTTGGGAATTTGGAGGGA+AGG | + | chr7.4:6054129-6054148 | None:intergenic | 40.0% | |
TCATAAGCACTCAAGCACTT+GGG | + | chr7.4:6053343-6053362 | None:intergenic | 40.0% | |
TCATTTCCCGGATTCTTATC+AGG | + | chr7.4:6050571-6050590 | None:intergenic | 40.0% | |
TTAAGTGCCAAACGACTCAA+TGG | + | chr7.4:6053455-6053474 | None:intergenic | 40.0% | |
TTCATAAGCACTCAAGCACT+TGG | + | chr7.4:6053344-6053363 | None:intergenic | 40.0% | |
TTCTTTCAGTTTCTTTGGCG+GGG | - | chr7.4:6051592-6051611 | MS.gene28798:intron | 40.0% | |
TTGAGTTTCCCCAAATTAGG+GGG | + | chr7.4:6053959-6053978 | None:intergenic | 40.0% | |
TTGGATTTGTGATTCCCTGA+GGG | + | chr7.4:6055530-6055549 | None:intergenic | 40.0% | |
TTTGGATTTGTGATTCCCTG+AGG | + | chr7.4:6055531-6055550 | None:intergenic | 40.0% | |
TTTGGTAGACATAAGCTCGA+AGG | - | chr7.4:6055414-6055433 | MS.gene28798:intron | 40.0% | |
! | ATTTTGCCCTGCAAATACAC+TGG | - | chr7.4:6052544-6052563 | MS.gene28798:intron | 40.0% |
! | CGACGACGTTATTGTTGATT+TGG | - | chr7.4:6051652-6051671 | MS.gene28798:intron | 40.0% |
! | CTTTAGGTTCAAGCTCTTGT+TGG | - | chr7.4:6055358-6055377 | MS.gene28798:intron | 40.0% |
! | GTACCTTACCTTTCGGATTT+TGG | - | chr7.4:6055168-6055187 | MS.gene28798:CDS | 40.0% |
!! | ACTACTTTAGGGTCTGTTTG+GGG | - | chr7.4:6053839-6053858 | MS.gene28798:CDS | 40.0% |
!! | AGAATGGTTGGTGAGAAAGA+TGG | + | chr7.4:6054769-6054788 | None:intergenic | 40.0% |
!! | GTCAGCATATGAGGTATTGT+CGG | - | chr7.4:6051021-6051040 | MS.gene28798:intron | 40.0% |
!! | GTTTTAGTCCTTAAGTGGCT+TGG | - | chr7.4:6053723-6053742 | MS.gene28798:intron | 40.0% |
!!! | ACAGGAGGTGCTATTTTATG+AGG | - | chr7.4:6054904-6054923 | MS.gene28798:intron | 40.0% |
!!! | GAGGTGCTATTTTATGAGGA+CGG | - | chr7.4:6054908-6054927 | MS.gene28798:intron | 40.0% |
!!! | GTGTTTCAATGTTTTTGGGG+TGG | + | chr7.4:6055487-6055506 | None:intergenic | 40.0% |
AAAGCTAGCTATCAAAGGGG+AGG | + | chr7.4:6053301-6053320 | None:intergenic | 45.0% | |
AACACGGTTGCTCATGTTCT+TGG | + | chr7.4:6054384-6054403 | None:intergenic | 45.0% | |
AATGTTGTAAAGCCAGCTCC+TGG | - | chr7.4:6052370-6052389 | MS.gene28798:intron | 45.0% | |
ACACGGTTGCTCATGTTCTT+GGG | + | chr7.4:6054383-6054402 | None:intergenic | 45.0% | |
ACTTGCATATTAGGGCAACC+CGG | - | chr7.4:6053494-6053513 | MS.gene28798:intron | 45.0% | |
AGTAAGGAAGTTCAAAGGGG+AGG | - | chr7.4:6055554-6055573 | MS.gene28798:intron | 45.0% | |
AGTGCATCCATTGAGTCGTT+TGG | - | chr7.4:6053445-6053464 | MS.gene28798:CDS | 45.0% | |
CATTGATCACAAACCTGGAC+AGG | + | chr7.4:6052767-6052786 | None:intergenic | 45.0% | |
CTAGAAGCCAGTGTATTTGC+AGG | + | chr7.4:6052554-6052573 | None:intergenic | 45.0% | |
CTGACATCATGTATTCCCAG+AGG | - | chr7.4:6052067-6052086 | MS.gene28798:intron | 45.0% | |
GAACCACTGAGCTATGCATA+TGG | + | chr7.4:6053817-6053836 | None:intergenic | 45.0% | |
GAGCTATGCATATGGTCATC+TGG | + | chr7.4:6053809-6053828 | None:intergenic | 45.0% | |
GATAGGGACTTGGCTATTAC+TGG | - | chr7.4:6053227-6053246 | MS.gene28798:intron | 45.0% | |
GCATCTACTGTGATCCTTGT+CGG | - | chr7.4:6055847-6055866 | MS.gene28798:intron | 45.0% | |
GGCTCTATTTGGGAATTTGG+AGG | + | chr7.4:6054134-6054153 | None:intergenic | 45.0% | |
GGGAAAAACCAAGCCACTTA+AGG | + | chr7.4:6053734-6053753 | None:intergenic | 45.0% | |
GTAAGGAAGTTCAAAGGGGA+GGG | - | chr7.4:6055555-6055574 | MS.gene28798:intron | 45.0% | |
GTAATAGCCAAGTCCCTATC+AGG | + | chr7.4:6053227-6053246 | None:intergenic | 45.0% | |
GTATATGGGTGGTTCCTTGA+AGG | - | chr7.4:6051694-6051713 | MS.gene28798:intron | 45.0% | |
GTCGGAACTGATGTCAAACA+AGG | + | chr7.4:6054667-6054686 | None:intergenic | 45.0% | |
TAAATGTGACCGCACCTTCA+AGG | + | chr7.4:6051711-6051730 | None:intergenic | 45.0% | |
TATTAGGCGACAAGGGAACA+CGG | + | chr7.4:6054400-6054419 | None:intergenic | 45.0% | |
TCTTTCAGTTTCTTTGGCGG+GGG | - | chr7.4:6051593-6051612 | MS.gene28798:intron | 45.0% | |
TGACCATATGCATAGCTCAG+TGG | - | chr7.4:6053811-6053830 | MS.gene28798:CDS | 45.0% | |
TGTGTGATATCTACCTGTCC+AGG | - | chr7.4:6052751-6052770 | MS.gene28798:intron | 45.0% | |
TTATGAAATGGTACCTGGGC+AGG | - | chr7.4:6053357-6053376 | MS.gene28798:intron | 45.0% | |
TTTCTGTTCCTCCGATAGTG+AGG | + | chr7.4:6055646-6055665 | None:intergenic | 45.0% | |
TTTGGGAATTTGGAGGGAAG+GGG | + | chr7.4:6054127-6054146 | None:intergenic | 45.0% | |
! | CAGTTACAGCGTCTTTTTCC+AGG | + | chr7.4:6052391-6052410 | None:intergenic | 45.0% |
! | TCTGTTTGGGGGTTTAGGAT+GGG | - | chr7.4:6053851-6053870 | MS.gene28798:CDS | 45.0% |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr7.4:6053596-6053615 | MS.gene28798:intron | 45.0% |
!! | CTACTTTAGGGTCTGTTTGG+GGG | - | chr7.4:6053840-6053859 | MS.gene28798:CDS | 45.0% |
!! | TCAAGTGTCGAAAGGTGCAT+CGG | - | chr7.4:6050498-6050517 | MS.gene28798:intron | 45.0% |
!! | TTTTAGGAGGAAGGGCTTTG+GGG | - | chr7.4:6053906-6053925 | MS.gene28798:intron | 45.0% |
!!! | AAGGAATGGAGGGTTTTAGG+AGG | - | chr7.4:6053893-6053912 | MS.gene28798:intron | 45.0% |
!!! | AAGTGGCTTGGTTTTTCCCA+TGG | - | chr7.4:6053735-6053754 | MS.gene28798:intron | 45.0% |
!!! | AATGGAGGGTTTTAGGAGGA+AGG | - | chr7.4:6053897-6053916 | MS.gene28798:intron | 45.0% |
!!! | ATGGAGGGTTTTAGGAGGAA+GGG | - | chr7.4:6053898-6053917 | MS.gene28798:intron | 45.0% |
!!! | GGGTTCTGGACTTGCTTTTA+TGG | - | chr7.4:6051548-6051567 | MS.gene28798:intron | 45.0% |
!!! | GTTTTAGGAGGAAGGGCTTT+GGG | - | chr7.4:6053905-6053924 | MS.gene28798:intron | 45.0% |
!!! | TCCCATGGCAGCTAGTTTTA+CGG | - | chr7.4:6053750-6053769 | MS.gene28798:intron | 45.0% |
!! | AAATAAATATTATAATTGTT+GGG | + | chr7.4:6053202-6053221 | None:intergenic | 5.0% |
!! | AATTTAATAATATCAATAAA+AGG | + | chr7.4:6054234-6054253 | None:intergenic | 5.0% |
!! | TAAATAAATATTATAATTGT+TGG | + | chr7.4:6053203-6053222 | None:intergenic | 5.0% |
AAAGTTCATGAGGTGCGGTG+CGG | + | chr7.4:6055072-6055091 | None:intergenic | 50.0% | |
AATTCAGCACCCCAAGCATG+TGG | + | chr7.4:6053784-6053803 | None:intergenic | 50.0% | |
ACGTTAAGCGGAAGGAATGG+AGG | - | chr7.4:6053882-6053901 | MS.gene28798:CDS | 50.0% | |
AGGACGTTAAGCGGAAGGAA+TGG | - | chr7.4:6053879-6053898 | MS.gene28798:CDS | 50.0% | |
AGGACTTGAACCCTGTTTCC+AGG | - | chr7.4:6053616-6053635 | MS.gene28798:intron | 50.0% | |
ATTCAGCACCCCAAGCATGT+GGG | + | chr7.4:6053783-6053802 | None:intergenic | 50.0% | |
ATTGAAGCTCCCGCATATGC+AGG | - | chr7.4:6053520-6053539 | MS.gene28798:intron | 50.0% | |
CACTCAAGCACTTGGGAGTT+GGG | + | chr7.4:6053336-6053355 | None:intergenic | 50.0% | |
CCCGTAAAACTAGCTGCCAT+GGG | + | chr7.4:6053754-6053773 | None:intergenic | 50.0% | |
CGTTAAGCGGAAGGAATGGA+GGG | - | chr7.4:6053883-6053902 | MS.gene28798:CDS | 50.0% | |
CTTATGTGCTTGAGGGGACT+GGG | - | chr7.4:6052672-6052691 | MS.gene28798:intron | 50.0% | |
GTCTGTTTGGGGGTTTAGGA+TGG | - | chr7.4:6053850-6053869 | MS.gene28798:CDS | 50.0% | |
GTTGCTGCTGTCAGCATATG+AGG | - | chr7.4:6051012-6051031 | MS.gene28798:intron | 50.0% | |
TAGGGTCTGTTTGGGGGTTT+AGG | - | chr7.4:6053846-6053865 | MS.gene28798:CDS | 50.0% | |
TCCCGTAAAACTAGCTGCCA+TGG | + | chr7.4:6053755-6053774 | None:intergenic | 50.0% | |
TCTGTTCCCCACCTCACTAT+CGG | - | chr7.4:6055632-6055651 | MS.gene28798:intron | 50.0% | |
TCTTGATGTGTATGGGGCTC+TGG | - | chr7.4:6051501-6051520 | MS.gene28798:intron | 50.0% | |
TGGAAACAGGGTTCAAGTCC+TGG | + | chr7.4:6053617-6053636 | None:intergenic | 50.0% | |
TGTTCCTCCGATAGTGAGGT+GGG | + | chr7.4:6055642-6055661 | None:intergenic | 50.0% | |
TTATGTGCTTGAGGGGACTG+GGG | - | chr7.4:6052673-6052692 | MS.gene28798:intron | 50.0% | |
TTGAAGCTCCCGCATATGCA+GGG | - | chr7.4:6053521-6053540 | MS.gene28798:intron | 50.0% | |
TTTCTTTGGCGGGGGATCAA+TGG | - | chr7.4:6051601-6051620 | MS.gene28798:intron | 50.0% | |
! | CGGAAGGAATGGAGGGTTTT+AGG | - | chr7.4:6053890-6053909 | MS.gene28798:intron | 50.0% |
! | GAAAGGCATGAAAGATGGCC+AGG | - | chr7.4:6052838-6052857 | MS.gene28798:intron | 50.0% |
! | GGCACATGAGTGCCTTATTG+TGG | - | chr7.4:6055868-6055887 | MS.gene28798:intron | 50.0% |
! | TTTGGGGGTTTAGGATGGGA+GGG | - | chr7.4:6053855-6053874 | MS.gene28798:CDS | 50.0% |
!! | AGGTGGTGGAATGAACATGC+AGG | - | chr7.4:6051117-6051136 | MS.gene28798:intron | 50.0% |
!!! | ACTGGTTTTCACGTGACACG+CGG | - | chr7.4:6051903-6051922 | MS.gene28798:intron | 50.0% |
!!! | ATGGCAGCTAGTTTTACGGG+AGG | - | chr7.4:6053754-6053773 | MS.gene28798:intron | 50.0% |
!!! | CCCATGGCAGCTAGTTTTAC+GGG | - | chr7.4:6053751-6053770 | MS.gene28798:intron | 50.0% |
!!! | GGTTTTAGGAGGAAGGGCTT+TGG | - | chr7.4:6053904-6053923 | MS.gene28798:intron | 50.0% |
!!! | TGGCAGCTAGTTTTACGGGA+GGG | - | chr7.4:6053755-6053774 | MS.gene28798:intron | 50.0% |
AAATGGGGGCGAGAAGCCTA+AGG | + | chr7.4:6055780-6055799 | None:intergenic | 55.0% | |
AACGCTCGACTCAGCCTTTC+TGG | + | chr7.4:6053421-6053440 | None:intergenic | 55.0% | |
AAGACACTGGAAACCTGCCC+AGG | + | chr7.4:6053373-6053392 | None:intergenic | 55.0% | |
ATGCGGGAGCTTCAATGCAC+CGG | + | chr7.4:6053516-6053535 | None:intergenic | 55.0% | |
CACGACTGTCACTATCACGC+TGG | - | chr7.4:6055117-6055136 | MS.gene28798:CDS | 55.0% | |
CCAGTCCCCTCAAGCACATA+AGG | + | chr7.4:6052674-6052693 | None:intergenic | 55.0% | |
CCTTATGTGCTTGAGGGGAC+TGG | - | chr7.4:6052671-6052690 | MS.gene28798:intron | 55.0% | |
CTGTTCCTCCGATAGTGAGG+TGG | + | chr7.4:6055643-6055662 | None:intergenic | 55.0% | |
GACGGCGAGCCCATAATTGA+TGG | - | chr7.4:6054926-6054945 | MS.gene28798:intron | 55.0% | |
GCACTCAAGCACTTGGGAGT+TGG | + | chr7.4:6053337-6053356 | None:intergenic | 55.0% | |
GGAATTTGGAGGGAAGGGGA+GGG | + | chr7.4:6054123-6054142 | None:intergenic | 55.0% | |
GTTCCTCCGATAGTGAGGTG+GGG | + | chr7.4:6055641-6055660 | None:intergenic | 55.0% | |
TATCACAGGCAAATCGGGCC+TGG | - | chr7.4:6052424-6052443 | MS.gene28798:intron | 55.0% | |
TGGGTGGTTCCTTGAAGGTG+CGG | - | chr7.4:6051699-6051718 | MS.gene28798:intron | 55.0% | |
! | AAGGCACTCATGTGCCGACA+AGG | + | chr7.4:6055864-6055883 | None:intergenic | 55.0% |
! | CAGCGTCTTTTTCCAGGAGC+TGG | + | chr7.4:6052385-6052404 | None:intergenic | 55.0% |
! | GTTTGGGGGTTTAGGATGGG+AGG | - | chr7.4:6053854-6053873 | MS.gene28798:CDS | 55.0% |
! | TTGGGGGTTTAGGATGGGAG+GGG | - | chr7.4:6053856-6053875 | MS.gene28798:CDS | 55.0% |
ACCACCTCTTCCTCCACCAG+CGG | + | chr7.4:6051104-6051123 | None:intergenic | 60.0% | |
AGGGGAGGACGTTAAGCGGA+AGG | - | chr7.4:6053874-6053893 | MS.gene28798:CDS | 60.0% | |
CATATGCAGGGTCCGGGAAG+GGG | - | chr7.4:6053533-6053552 | MS.gene28798:intron | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr7.4:6053533-6053552 | None:intergenic | 60.0% | |
CTTTGGCGGGGGATCAATGG+AGG | - | chr7.4:6051604-6051623 | MS.gene28798:intron | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr7.4:6053532-6053551 | MS.gene28798:intron | 60.0% | |
GGAGGGTTCCCACATGCTTG+GGG | - | chr7.4:6053772-6053791 | MS.gene28798:intron | 60.0% | |
GGGAATTTGGAGGGAAGGGG+AGG | + | chr7.4:6054124-6054143 | None:intergenic | 60.0% | |
GGGAGGGTTCCCACATGCTT+GGG | - | chr7.4:6053771-6053790 | MS.gene28798:intron | 60.0% | |
GTTCCCCACCTCACTATCGG+AGG | - | chr7.4:6055635-6055654 | MS.gene28798:CDS | 60.0% | |
TGCGGGAGCTTCAATGCACC+GGG | + | chr7.4:6053515-6053534 | None:intergenic | 60.0% | |
TGGGAGGGGAGGACGTTAAG+CGG | - | chr7.4:6053870-6053889 | MS.gene28798:CDS | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr7.4:6053532-6053551 | None:intergenic | 60.0% | |
TTGAAGCAGCATGCCGCTGG+TGG | - | chr7.4:6051088-6051107 | MS.gene28798:intron | 60.0% | |
TTGAGGGGACTGGGGTGTGA+AGG | - | chr7.4:6052681-6052700 | MS.gene28798:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr7.4:6053548-6053567 | None:intergenic | 60.0% |
! | GGTTTGAAGCAGCATGCCGC+TGG | - | chr7.4:6051085-6051104 | MS.gene28798:intron | 60.0% |
AAGCAGCATGCCGCTGGTGG+AGG | - | chr7.4:6051091-6051110 | MS.gene28798:intron | 65.0% | |
CATGCCGCTGGTGGAGGAAG+AGG | - | chr7.4:6051097-6051116 | MS.gene28798:intron | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | - | chr7.4:6053531-6053550 | MS.gene28798:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr7.4:6053546-6053565 | MS.gene28798:intron | 65.0% | |
CGGGAGGGTTCCCACATGCT+TGG | - | chr7.4:6053770-6053789 | MS.gene28798:intron | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr7.4:6053527-6053546 | MS.gene28798:intron | 65.0% | |
GAGGGAAGGGGAGGGCTTTG+GGG | + | chr7.4:6054115-6054134 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr7.4:6053526-6053545 | MS.gene28798:intron | 65.0% | |
GCTGGTGGAGGAAGAGGTGG+TGG | - | chr7.4:6051103-6051122 | MS.gene28798:intron | 65.0% | |
GGAGGGAAGGGGAGGGCTTT+GGG | + | chr7.4:6054116-6054135 | None:intergenic | 65.0% | |
TGGAGGGAAGGGGAGGGCTT+TGG | + | chr7.4:6054117-6054136 | None:intergenic | 65.0% | |
! | AGGGAAGGGGAGGGCTTTGG+GGG | + | chr7.4:6054114-6054133 | None:intergenic | 65.0% |
! | GGGGTTTAGGATGGGAGGGG+AGG | - | chr7.4:6053859-6053878 | MS.gene28798:CDS | 65.0% |
!! | AGGGGAGGGCTTTGGGGGAT+TGG | + | chr7.4:6054109-6054128 | None:intergenic | 65.0% |
GCCGCTGGTGGAGGAAGAGG+TGG | - | chr7.4:6051100-6051119 | MS.gene28798:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 6050320 | 6055940 | 6050320 | ID=MS.gene28798 |
chr7.4 | mRNA | 6050320 | 6055940 | 6050320 | ID=MS.gene28798.t1;Parent=MS.gene28798 |
chr7.4 | exon | 6055870 | 6055940 | 6055870 | ID=MS.gene28798.t1.exon1;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6055870 | 6055940 | 6055870 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6055635 | 6055783 | 6055635 | ID=MS.gene28798.t1.exon2;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6055635 | 6055783 | 6055635 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6055108 | 6055234 | 6055108 | ID=MS.gene28798.t1.exon3;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6055108 | 6055234 | 6055108 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6054545 | 6054659 | 6054545 | ID=MS.gene28798.t1.exon4;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6054545 | 6054659 | 6054545 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6053789 | 6053905 | 6053789 | ID=MS.gene28798.t1.exon5;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6053789 | 6053905 | 6053789 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6053401 | 6053487 | 6053401 | ID=MS.gene28798.t1.exon6;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6053401 | 6053487 | 6053401 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6051293 | 6051352 | 6051293 | ID=MS.gene28798.t1.exon7;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6051293 | 6051352 | 6051293 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6051122 | 6051199 | 6051122 | ID=MS.gene28798.t1.exon8;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6051122 | 6051199 | 6051122 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6050825 | 6050896 | 6050825 | ID=MS.gene28798.t1.exon9;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6050825 | 6050896 | 6050825 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6050631 | 6050726 | 6050631 | ID=MS.gene28798.t1.exon10;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6050631 | 6050726 | 6050631 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
chr7.4 | exon | 6050320 | 6050352 | 6050320 | ID=MS.gene28798.t1.exon11;Parent=MS.gene28798.t1 |
chr7.4 | CDS | 6050320 | 6050352 | 6050320 | ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1 |
Gene Sequence |
Protein sequence |