AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28798


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28798.t1 MTR_7g109340 96.716 335 9 1 1 333 1 335 0.0 672
MS.gene28798.t1 MTR_8g006430 37.879 330 168 9 27 323 15 340 3.11e-52 178
MS.gene28798.t1 MTR_4g078850 35.604 323 178 7 27 323 5 323 1.54e-46 161
MS.gene28798.t1 MTR_3g108020 33.225 307 191 7 27 324 5 306 5.33e-46 159
MS.gene28798.t1 MTR_4g015840 36.223 323 171 8 27 323 5 318 7.64e-46 159
MS.gene28798.t1 MTR_2g014470 33.962 318 185 8 27 323 5 318 1.43e-43 153
MS.gene28798.t1 MTR_2g090705 34.268 321 176 9 27 323 5 314 4.10e-42 149
MS.gene28798.t1 MTR_4g050420 36.391 327 174 7 27 323 14 336 2.94e-39 143
MS.gene28798.t1 MTR_2g087660 34.132 334 174 9 27 323 14 338 1.70e-38 141
MS.gene28798.t1 MTR_2g087660 34.839 310 155 8 27 302 14 310 3.34e-35 130
MS.gene28798.t1 MTR_2g014480 31.307 329 193 8 27 327 5 328 8.67e-34 127
MS.gene28798.t1 MTR_1g087580 39.171 217 81 5 125 333 2 175 9.86e-34 123
MS.gene28798.t1 MTR_3g087030 32.515 326 185 12 27 321 83 404 1.58e-32 125
MS.gene28798.t1 MTR_4g023470 30.423 355 189 12 20 333 80 417 1.74e-28 114
MS.gene28798.t1 MTR_2g104030 28.035 346 193 10 23 322 67 402 3.98e-28 114
MS.gene28798.t1 MTR_3g027580 29.012 324 209 6 20 323 83 405 5.30e-28 113
MS.gene28798.t1 MTR_5g037880 29.642 307 148 9 27 323 6 254 2.37e-26 106
MS.gene28798.t1 MTR_5g065160 27.095 358 202 9 18 333 75 415 3.74e-24 102
MS.gene28798.t1 MTR_5g065160 27.095 358 202 9 18 333 74 414 4.09e-24 102
MS.gene28798.t1 MTR_5g065160 27.697 343 219 9 18 333 68 408 5.81e-24 102
MS.gene28798.t1 MTR_5g065160 27.697 343 219 9 18 333 75 415 6.70e-24 102
MS.gene28798.t1 MTR_3g437850 35.366 164 81 4 27 165 3 166 1.57e-20 87.4
MS.gene28798.t1 MTR_4g015840 29.075 227 124 4 98 323 51 241 7.91e-18 82.4
MS.gene28798.t1 MTR_1g110310 58.824 68 28 0 28 95 18 85 1.76e-17 83.2
MS.gene28798.t1 MTR_7g069480 45.745 94 49 2 1 93 1 93 1.88e-16 80.5
MS.gene28798.t1 MTR_7g101070 62.121 66 24 1 25 89 357 422 2.26e-16 80.1
MS.gene28798.t1 MTR_6g471050 28.662 314 168 14 52 320 7 309 3.26e-16 79.3
MS.gene28798.t1 MTR_1g052110 44.086 93 48 2 26 118 38 126 1.39e-15 76.3
MS.gene28798.t1 MTR_1g029460 36.364 121 70 1 27 147 7 120 1.45e-15 77.4
MS.gene28798.t1 MTR_3g437360 54.930 71 31 1 27 96 6 76 1.66e-15 76.6
MS.gene28798.t1 MTR_7g092380 52.239 67 32 0 25 91 21 87 2.67e-15 75.5
MS.gene28798.t1 MTR_8g037810 44.000 100 49 1 26 125 6 98 6.60e-15 75.1
MS.gene28798.t1 MTR_5g012530 45.783 83 42 2 25 104 11 93 1.26e-13 72.0
MS.gene28798.t1 MTR_5g004570 35.965 114 66 1 27 140 7 113 1.70e-13 69.7
MS.gene28798.t1 MTR_5g035770 47.826 69 36 0 28 96 27 95 3.69e-13 70.1
MS.gene28798.t1 MTR_5g065860 47.887 71 36 1 19 88 40 110 4.53e-13 66.2
MS.gene28798.t1 MTR_1g105540 42.683 82 45 2 8 88 16 96 4.94e-13 68.9
MS.gene28798.t1 MTR_7g112360 48.485 66 30 2 27 88 17 82 5.31e-13 65.1
MS.gene28798.t1 MTR_7g112360 48.485 66 30 2 27 88 17 82 1.22e-12 65.5
MS.gene28798.t1 MTR_1g029470 35.537 121 71 1 27 147 7 120 4.44e-12 66.6
MS.gene28798.t1 MTR_8g022310 50.000 68 28 2 27 88 11 78 4.49e-12 65.1
MS.gene28798.t1 MTR_8g081620 41.463 82 44 2 25 104 59 138 4.83e-12 64.3
MS.gene28798.t1 MTR_8g022310 50.000 68 28 2 27 88 11 78 5.97e-12 64.7
MS.gene28798.t1 MTR_8g022310 50.000 68 28 2 27 88 11 78 6.10e-12 64.3
MS.gene28798.t1 MTR_4g023490 27.684 354 204 14 21 333 11 353 6.62e-12 66.2
MS.gene28798.t1 MTR_8g022310 50.000 68 28 2 27 88 11 78 7.94e-12 64.7
MS.gene28798.t1 MTR_2g044580 41.860 86 47 3 8 91 80 164 1.03e-11 66.2
MS.gene28798.t1 MTR_7g069480 40.426 94 48 3 1 93 1 87 8.55e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28798.t1 AT3G62600 79.205 327 64 2 1 324 1 326 0.0 527
MS.gene28798.t1 AT3G08910 36.306 314 165 8 27 323 5 300 8.81e-50 169
MS.gene28798.t1 AT5G01390 34.268 321 175 8 27 323 5 313 1.87e-49 168
MS.gene28798.t1 AT2G20560 33.956 321 179 7 27 323 5 316 2.33e-47 163
MS.gene28798.t1 AT5G25530 34.375 320 182 9 27 324 5 318 1.30e-46 161
MS.gene28798.t1 AT5G25530 33.537 328 182 10 27 324 5 326 6.83e-44 154
MS.gene28798.t1 AT5G22060 36.858 331 169 11 27 323 15 339 1.19e-43 155
MS.gene28798.t1 AT1G59725 31.471 340 156 8 27 324 5 309 2.06e-40 144
MS.gene28798.t1 AT1G10350 32.012 328 188 6 27 324 5 327 4.28e-40 144
MS.gene28798.t1 AT4G28480 32.776 299 165 6 27 323 5 269 4.89e-39 140
MS.gene28798.t1 AT3G44110 34.234 333 174 9 27 323 15 338 3.17e-38 141
MS.gene28798.t1 AT5G01390 31.949 313 135 6 27 323 5 255 8.59e-38 136
MS.gene28798.t1 AT3G44110 34.286 315 173 7 27 311 15 325 1.54e-36 134
MS.gene28798.t1 AT5G48030 31.343 335 196 6 20 323 88 419 2.35e-34 131
MS.gene28798.t1 AT2G22360 33.742 326 180 13 27 321 87 407 1.14e-31 123
MS.gene28798.t1 AT3G47940 31.343 335 171 11 27 319 5 322 2.91e-30 118
MS.gene28798.t1 AT4G39960 30.723 332 189 11 27 321 86 413 8.42e-28 113
MS.gene28798.t1 AT4G39960 30.723 332 189 11 27 321 86 413 8.42e-28 113
MS.gene28798.t1 AT1G80030 30.060 336 191 12 27 322 76 407 5.80e-27 110
MS.gene28798.t1 AT1G80030 29.882 338 193 12 27 324 76 409 6.46e-27 110
MS.gene28798.t1 AT1G80030 29.882 338 193 12 27 324 76 409 6.46e-27 110
MS.gene28798.t1 AT1G80030 29.882 338 193 12 27 324 76 409 6.46e-27 110
MS.gene28798.t1 AT5G01390 34.848 198 96 6 27 201 5 192 1.30e-26 105
MS.gene28798.t1 AT5G01390 48.148 108 41 2 27 119 5 112 1.90e-25 102
MS.gene28798.t1 AT1G28210 25.672 335 200 10 23 323 45 364 1.52e-19 89.0
MS.gene28798.t1 AT1G28210 25.672 335 200 10 23 323 45 364 1.69e-19 89.0
MS.gene28798.t1 AT1G28210 25.672 335 200 10 23 323 45 364 1.97e-19 89.0
MS.gene28798.t1 AT2G21510 45.455 99 47 1 27 125 7 98 8.37e-18 83.6
MS.gene28798.t1 AT2G21510 45.455 99 47 1 27 125 7 98 8.37e-18 83.6
MS.gene28798.t1 AT2G21510 45.455 99 47 1 27 125 7 98 9.27e-18 83.2
MS.gene28798.t1 AT2G21510 45.455 99 47 1 27 125 7 98 1.10e-17 83.2
MS.gene28798.t1 AT2G21510 45.455 99 47 1 27 125 7 98 1.10e-17 83.2
MS.gene28798.t1 AT3G17830 27.003 337 191 11 19 309 56 383 1.54e-17 84.0
MS.gene28798.t1 AT4G39150 41.176 119 61 2 27 145 7 116 6.97e-17 80.9
MS.gene28798.t1 AT4G39150 41.176 119 61 2 27 145 7 116 6.97e-17 80.9
MS.gene28798.t1 AT4G39150 41.176 119 61 2 27 145 7 116 6.97e-17 80.9
MS.gene28798.t1 AT1G68370 57.353 68 29 0 28 95 19 86 1.01e-16 80.9
MS.gene28798.t1 AT1G59980 48.529 68 35 0 28 95 25 92 8.36e-16 77.8
MS.gene28798.t1 AT1G59980 48.529 68 35 0 28 95 25 92 1.50e-15 77.4
MS.gene28798.t1 AT5G03160 56.061 66 28 1 25 89 369 434 4.20e-15 76.3
MS.gene28798.t1 AT2G20550 30.114 176 115 4 163 334 106 277 5.35e-15 74.7
MS.gene28798.t1 AT2G20550 30.114 176 115 4 163 334 106 277 5.35e-15 74.7
MS.gene28798.t1 AT3G08970 57.576 66 27 1 28 93 29 93 7.60e-15 75.9
MS.gene28798.t1 AT3G08970 57.576 66 27 1 28 93 29 93 7.60e-15 75.9
MS.gene28798.t1 AT5G05750 40.909 110 51 4 25 123 113 219 1.52e-14 73.6
MS.gene28798.t1 AT4G28480 30.247 162 108 3 163 323 170 327 3.34e-14 73.2
MS.gene28798.t1 AT1G56300 52.239 67 28 2 26 88 13 79 9.67e-14 67.4
MS.gene28798.t1 AT5G16650 52.239 67 32 0 25 91 10 76 1.01e-13 67.8
MS.gene28798.t1 AT5G16650 52.239 67 32 0 25 91 10 76 1.20e-13 68.6
MS.gene28798.t1 AT1G79940 50.769 65 30 2 28 91 101 164 2.30e-13 71.2
MS.gene28798.t1 AT1G56300 52.239 67 28 2 26 88 13 79 2.35e-13 67.4
MS.gene28798.t1 AT1G79940 50.769 65 30 2 28 91 101 164 2.52e-13 71.2
MS.gene28798.t1 AT1G79940 50.769 65 30 2 28 91 101 164 2.52e-13 71.2
MS.gene28798.t1 AT1G79940 50.769 65 30 2 28 91 101 164 2.52e-13 71.2
MS.gene28798.t1 AT1G44160 27.895 190 102 4 147 323 166 333 2.57e-13 70.5
MS.gene28798.t1 AT4G21180 52.308 65 29 2 28 91 101 164 3.38e-13 70.9
MS.gene28798.t1 AT4G21180 52.308 65 29 2 28 91 21 84 3.55e-13 70.9
MS.gene28798.t1 AT2G35720 50.000 74 34 2 25 95 14 87 6.10e-13 70.1
MS.gene28798.t1 AT1G24120 47.059 68 36 0 28 95 22 89 1.10e-12 68.9
MS.gene28798.t1 AT3G57340 41.237 97 48 3 25 115 112 205 2.01e-12 67.8
MS.gene28798.t1 AT3G57340 41.237 97 48 3 25 115 112 205 2.01e-12 67.8
MS.gene28798.t1 AT2G33735 46.154 65 35 0 25 89 21 85 2.99e-12 63.2
MS.gene28798.t1 AT2G33735 46.154 65 35 0 25 89 21 85 2.99e-12 63.2
MS.gene28798.t1 AT5G06910 45.455 66 36 0 26 91 29 94 5.63e-12 65.9
MS.gene28798.t1 AT4G13830 43.939 66 35 1 26 89 66 131 7.18e-12 63.9
MS.gene28798.t1 AT1G71000 48.529 68 31 2 25 88 7 74 8.04e-12 63.2
MS.gene28798.t1 AT4G13830 43.939 66 35 1 26 89 66 131 8.09e-12 63.2
MS.gene28798.t1 AT3G12170 34.906 106 61 2 25 128 10 109 8.48e-12 65.1
MS.gene28798.t1 AT3G12170 34.906 106 61 2 25 128 46 145 8.53e-12 65.5
MS.gene28798.t1 AT1G76700 38.298 94 51 1 27 120 7 93 9.23e-12 65.9
MS.gene28798.t1 AT1G71000 48.529 68 31 2 25 88 7 74 1.40e-11 62.8
MS.gene28798.t1 AT4G13830 43.939 66 35 1 26 89 66 131 2.19e-11 62.8
MS.gene28798.t1 AT1G21080 36.364 99 55 1 27 125 7 97 2.23e-11 64.7
MS.gene28798.t1 AT1G21080 36.364 99 55 1 27 125 7 97 2.78e-11 64.3
MS.gene28798.t1 AT5G49060 50.746 67 28 2 27 91 100 163 3.16e-11 64.3
MS.gene28798.t1 AT5G49060 50.746 67 28 2 27 91 100 163 3.16e-11 64.3

Find 77 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAGAATCTGGAGATTTA+AGG 0.175844 7.4:-6051293 MS.gene28798:CDS
TCCAGATTCTCCATCAATTA+TGG 0.185165 7.4:+6051302 None:intergenic
AATGTTTCTTTCAGTTTCTT+TGG 0.228428 7.4:-6054651 MS.gene28798:intron
CGACGACGTTATTGTTGATT+TGG 0.287066 7.4:-6054586 MS.gene28798:CDS
TTGAACTTCCTTACTTGCTT+TGG 0.294218 7.4:+6050692 None:intergenic
AACCCTTGAAGATTTGTATA+TGG 0.319394 7.4:-6054559 MS.gene28798:CDS
GTCATTTGTTGAAACATTCC+AGG 0.330187 7.4:+6053796 None:intergenic
TTATTAGCTTCTTCATTTCC+CGG 0.331012 7.4:+6055658 None:intergenic
TCATTTCCCGGATTCTTATC+AGG 0.331429 7.4:+6055670 None:intergenic
CCCATAATTGATGGAGAATC+TGG 0.346187 7.4:-6051303 MS.gene28798:CDS
CTTTAGGTTCAAGCTCTTGT+TGG 0.355874 7.4:-6050880 MS.gene28798:intron
CCAGATTCTCCATCAATTAT+GGG 0.369755 7.4:+6051303 None:intergenic
TGGAGAATCTGGAGATTTAA+GGG 0.381629 7.4:-6051292 MS.gene28798:intron
AGAAATATTTATGATAAGTA+TGG 0.388738 7.4:-6055183 MS.gene28798:CDS
ACAGAGAAGGAACAACAATT+TGG 0.396887 7.4:+6055902 None:intergenic
TAAACACCTTGATGAACATT+TGG 0.407639 7.4:-6050842 MS.gene28798:CDS
GAGGTTTATCACAGGCAAAT+CGG 0.416921 7.4:-6053820 MS.gene28798:CDS
GTCACTGTTGATATTGAGAA+AGG 0.417431 7.4:-6053417 MS.gene28798:CDS
AGCAAGTAAGGAAGTTCAAA+GGG 0.426789 7.4:-6050688 MS.gene28798:CDS
CATGCCGCTGGTGGAGGAAG+AGG 0.435113 7.4:-6055141 MS.gene28798:CDS
ATGTTCATCAAGGTGTTTAA+CGG 0.438073 7.4:+6050846 None:intergenic
AGGTTTATCACAGGCAAATC+GGG 0.442881 7.4:-6053819 MS.gene28798:CDS
TCACAAATCCAAAGCAAGTA+AGG 0.443028 7.4:-6050700 MS.gene28798:CDS
GTATCATCCTGATAAGAATC+CGG 0.445522 7.4:-6055677 MS.gene28798:CDS
TTTCTTTCAGTTTCTTTGGC+GGG 0.452768 7.4:-6054647 MS.gene28798:intron
TAAATGTGACCGCACCTTCA+AGG 0.454412 7.4:+6054530 None:intergenic
GACGGCGAGCCCATAATTGA+TGG 0.455291 7.4:-6051312 MS.gene28798:CDS
CACCCATATACAAATCTTCA+AGG 0.462023 7.4:+6054556 None:intergenic
TTCTTTGTGCTCATATGCAA+TGG 0.465194 7.4:+6050656 None:intergenic
TATGATAAGTATGGTGAAGA+GGG 0.468509 7.4:-6055174 MS.gene28798:CDS
AATGTTGTAAAGCCAGCTCC+TGG 0.471578 7.4:-6053868 MS.gene28798:CDS
GTATATGGGTGGTTCCTTGA+AGG 0.471939 7.4:-6054544 MS.gene28798:intron
TTCTTTCAGTTTCTTTGGCG+GGG 0.473982 7.4:-6054646 MS.gene28798:intron
ACCCTTGAAGATTTGTATAT+GGG 0.478838 7.4:-6054558 MS.gene28798:CDS
GAAAGGCATGAAAGATGGCC+AGG 0.488282 7.4:-6053400 MS.gene28798:intron
TATCACAGGCAAATCGGGCC+TGG 0.488499 7.4:-6053814 MS.gene28798:CDS
AAGCAGCATGCCGCTGGTGG+AGG 0.488986 7.4:-6055147 MS.gene28798:CDS
GTTTCTTTCAGTTTCTTTGG+CGG 0.494548 7.4:-6054648 MS.gene28798:intron
GTGCTAATGTCAAATACGTA+AGG 0.495722 7.4:-6053452 MS.gene28798:CDS
GTTGCTGCTGTCAGCATATG+AGG 0.502282 7.4:-6055226 MS.gene28798:intron
AGAAGCTAATAAGAAATTTG+CGG 0.505990 7.4:-6055647 MS.gene28798:CDS
TATCATCCTGATAAGAATCC+GGG 0.516808 7.4:-6055676 MS.gene28798:CDS
GCCGCTGGTGGAGGAAGAGG+TGG 0.524267 7.4:-6055138 MS.gene28798:CDS
GCTGGTGGAGGAAGAGGTGG+TGG 0.526997 7.4:-6055135 MS.gene28798:CDS
GTCAGCATATGAGGTATTGT+CGG 0.527426 7.4:-6055217 MS.gene28798:intron
TTGAAGCAGCATGCCGCTGG+TGG 0.528180 7.4:-6055150 MS.gene28798:CDS
GGTTTGAAGCAGCATGCCGC+TGG 0.535682 7.4:-6055153 MS.gene28798:CDS
ATTGTAATTATCAGGTTTGG+AGG 0.539622 7.4:-6053897 MS.gene28798:intron
TCTTTCAGTTTCTTTGGCGG+GGG 0.541453 7.4:-6054645 MS.gene28798:intron
TTGCATATGAGCACAAAGAA+AGG 0.546751 7.4:-6050653 MS.gene28798:CDS
ATTGAGAAAGGCATGAAAGA+TGG 0.548944 7.4:-6053405 MS.gene28798:CDS
CTTGAAGATTTGTATATGGG+TGG 0.550525 7.4:-6054555 MS.gene28798:CDS
TTGTAATTATCAGGTTTGGA+GGG 0.555966 7.4:-6053896 MS.gene28798:intron
AAGCAAGTAAGGAAGTTCAA+AGG 0.564203 7.4:-6050689 MS.gene28798:CDS
TTATGATAAGTATGGTGAAG+AGG 0.574404 7.4:-6055175 MS.gene28798:CDS
TGTCTACCAAATGTTCATCA+AGG 0.574433 7.4:+6050836 None:intergenic
GTTTCAACAAATGACAGAGC+AGG 0.577760 7.4:-6053788 MS.gene28798:intron
GTAAGGAAGTTCAAAGGGGA+GGG 0.585483 7.4:-6050683 MS.gene28798:CDS
ACGCTGTAACTGTAGAAATG+AGG 0.598744 7.4:-6053839 MS.gene28798:CDS
TGCTAATGTCAAATACGTAA+GGG 0.599841 7.4:-6053451 MS.gene28798:CDS
TCAAGTGTCGAAAGGTGCAT+CGG 0.599920 7.4:-6055740 MS.gene28798:CDS
AATAGCATAGAGCACAGAGA+AGG 0.608834 7.4:+6055889 None:intergenic
AGTAAGGAAGTTCAAAGGGG+AGG 0.612915 7.4:-6050684 MS.gene28798:CDS
ACCACCTCTTCCTCCACCAG+CGG 0.613282 7.4:+6055137 None:intergenic
AAATTTGCGGAGATTAGCAA+TGG 0.617908 7.4:-6055634 MS.gene28798:intron
GTAGAAATGAGGTTTATCAC+AGG 0.618569 7.4:-6053828 MS.gene28798:CDS
AATGTCAAATACGTAAGGGA+GGG 0.618582 7.4:-6053447 MS.gene28798:CDS
AGGTGGTGGAATGAACATGC+AGG 0.620609 7.4:-6055121 MS.gene28798:CDS
TTTGAAAAGTTCATGAGGTG+CGG 0.629074 7.4:+6051164 None:intergenic
GAAGAAGAGAAAATTGCGAA+AGG 0.633709 7.4:-6054609 MS.gene28798:CDS
TAATGTCAAATACGTAAGGG+AGG 0.634516 7.4:-6053448 MS.gene28798:CDS
ACCCATATACAAATCTTCAA+GGG 0.634761 7.4:+6054557 None:intergenic
GATATACTTCAAGTGTCGAA+AGG 0.635494 7.4:-6055748 MS.gene28798:CDS
CACGACTGTCACTATCACGC+TGG 0.651681 7.4:-6051121 MS.gene28798:intron
TTTGGTAGACATAAGCTCGA+AGG 0.653250 7.4:-6050824 MS.gene28798:intron
AAAGTTCATGAGGTGCGGTG+CGG 0.717597 7.4:+6051169 None:intergenic
GCAAGTAAGGAAGTTCAAAG+GGG 0.733693 7.4:-6050687 MS.gene28798:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATAATATATGTTTA+TGG - chr7.4:6051284-6051303 MS.gene28798:intron 10.0%
!! ATATATAAATTAAACATTTC+TGG + chr7.4:6052617-6052636 None:intergenic 10.0%
!!! AATAAAAATAAAGTATCTAT+TGG + chr7.4:6055815-6055834 None:intergenic 10.0%
!!! ATATTTTTATAAGCTATATT+AGG - chr7.4:6050830-6050849 MS.gene28798:CDS 10.0%
!!! TATTTTTATAAGCTATATTA+GGG - chr7.4:6050831-6050850 MS.gene28798:CDS 10.0%
!!! TTTTATTTATGATTTTCTAT+TGG + chr7.4:6051964-6051983 None:intergenic 10.0%
!! AAAATATACATCCTAAAAAA+TGG + chr7.4:6052529-6052548 None:intergenic 15.0%
!! AAGGATAAACATAAAAAATA+CGG - chr7.4:6054350-6054369 MS.gene28798:intron 15.0%
!! AATGACTATATTAAAATTTG+TGG + chr7.4:6051433-6051452 None:intergenic 15.0%
!! ACAAAAATAAAATCAATTCT+TGG - chr7.4:6055666-6055685 MS.gene28798:CDS 15.0%
!! AGAAATATTTATGATAAGTA+TGG - chr7.4:6051055-6051074 MS.gene28798:intron 15.0%
!! ATTATTGTATTGTAATTATC+AGG - chr7.4:6052333-6052352 MS.gene28798:intron 15.0%
!! GTATTTAATTATTTACCAAT+GGG - chr7.4:6051768-6051787 MS.gene28798:intron 15.0%
!! TGTATTTAATTATTTACCAA+TGG - chr7.4:6051767-6051786 MS.gene28798:intron 15.0%
!!! ATTTTTATAAGCTATATTAG+GGG - chr7.4:6050832-6050851 MS.gene28798:CDS 15.0%
!!! CATAAATTTTTGCAAATATT+CGG + chr7.4:6052725-6052744 None:intergenic 15.0%
!!! GATATAAATTAAGTTTGTTT+TGG + chr7.4:6054304-6054323 None:intergenic 15.0%
!!! TTTCCTTTAAAAAAAAAACA+AGG + chr7.4:6054639-6054658 None:intergenic 15.0%
!! AACCATTAATAACCAAAATA+AGG + chr7.4:6050982-6051001 None:intergenic 20.0%
!! AATATTTATTTACCCTGATA+GGG - chr7.4:6053211-6053230 MS.gene28798:intron 20.0%
!! ACATTTCAGATATGTATTAT+CGG - chr7.4:6051211-6051230 MS.gene28798:intron 20.0%
!! ACCATTAATAACCAAAATAA+GGG + chr7.4:6050981-6051000 None:intergenic 20.0%
!! AGTGAAAATGTTTACTTATA+AGG - chr7.4:6050801-6050820 MS.gene28798:intron 20.0%
!! ATTGGTTAACTAACAAAAAA+TGG + chr7.4:6055797-6055816 None:intergenic 20.0%
!! GTCATTTAAATCTAAATCTT+AGG + chr7.4:6054430-6054449 None:intergenic 20.0%
!! TAATATTTATTTACCCTGAT+AGG - chr7.4:6053210-6053229 MS.gene28798:intron 20.0%
!! TACATAAACACTTATATGAT+AGG + chr7.4:6050749-6050768 None:intergenic 20.0%
!! TGAAAGAAACATTCATATTT+CGG + chr7.4:6051580-6051599 None:intergenic 20.0%
!! TGAATAATATACTAGTAGAT+GGG - chr7.4:6051855-6051874 MS.gene28798:intron 20.0%
!! TGTCTTAGAAAAACTATATA+TGG - chr7.4:6053387-6053406 MS.gene28798:intron 20.0%
!! TTGAATAATATACTAGTAGA+TGG - chr7.4:6051854-6051873 MS.gene28798:intron 20.0%
!! TTGGTTAACTAACAAAAAAT+GGG + chr7.4:6055796-6055815 None:intergenic 20.0%
!! TTTGCTTATAAATCTATGTT+TGG - chr7.4:6050447-6050466 MS.gene28798:intron 20.0%
!!! AACTTTTAAAGTTTGTATGT+AGG - chr7.4:6052863-6052882 MS.gene28798:intron 20.0%
!!! AATATCTGAGATTTATCAAA+AGG + chr7.4:6052107-6052126 None:intergenic 20.0%
!!! ATATCTGAGATTTATCAAAA+GGG + chr7.4:6052106-6052125 None:intergenic 20.0%
!!! CCAAAAAATTCATGTTATTT+TGG - chr7.4:6054165-6054184 MS.gene28798:intron 20.0%
!!! CCAAAATAACATGAATTTTT+TGG + chr7.4:6054168-6054187 None:intergenic 20.0%
!!! GATCCTTGTTTTTTTTTTAA+AGG - chr7.4:6054633-6054652 MS.gene28798:CDS 20.0%
!!! GTTTTGGTCAAAAAAAAAAA+TGG + chr7.4:6054288-6054307 None:intergenic 20.0%
!!! TACTTTATTTTTACTTGCAT+TGG - chr7.4:6051239-6051258 MS.gene28798:intron 20.0%
!!! TATTAGAAGAGATTTTTGAA+GGG - chr7.4:6053983-6054002 MS.gene28798:intron 20.0%
!!! TGTATGCTAATTTTTAGTAT+GGG - chr7.4:6051527-6051546 MS.gene28798:intron 20.0%
!!! TTGTATGCTAATTTTTAGTA+TGG - chr7.4:6051526-6051545 MS.gene28798:intron 20.0%
!!! TTTATTCTTGTCCATTTTTT+AGG - chr7.4:6052515-6052534 MS.gene28798:intron 20.0%
!!! TTTTTATAAGCTATATTAGG+GGG - chr7.4:6050833-6050852 MS.gene28798:CDS 20.0%
! AAAAATGGACAAGAATAAAC+AGG + chr7.4:6052514-6052533 None:intergenic 25.0%
! AAACAATGTTCAATACAAGA+AGG - chr7.4:6054331-6054350 MS.gene28798:intron 25.0%
! AAACTGTTCATATTAGCATA+TGG + chr7.4:6055044-6055063 None:intergenic 25.0%
! AATCTTAGGTGAAGTTTATT+AGG + chr7.4:6054416-6054435 None:intergenic 25.0%
! AATGTTTCTTTCAGTTTCTT+TGG - chr7.4:6051587-6051606 MS.gene28798:intron 25.0%
! AGAAGCTAATAAGAAATTTG+CGG - chr7.4:6050591-6050610 MS.gene28798:intron 25.0%
! AGGAAAACAGAAAAATTACA+CGG + chr7.4:6050390-6050409 None:intergenic 25.0%
! ATTATCACACTAACTGTAAT+CGG - chr7.4:6051345-6051364 MS.gene28798:intron 25.0%
! CTTGACTAATTGAATGTTTA+TGG - chr7.4:6054864-6054883 MS.gene28798:intron 25.0%
! GAATCAATAAAACCATATGA+AGG + chr7.4:6051373-6051392 None:intergenic 25.0%
! TGGTTAACTAACAAAAAATG+GGG + chr7.4:6055795-6055814 None:intergenic 25.0%
! TGTATTGTAATTATCAGGTT+TGG - chr7.4:6052338-6052357 MS.gene28798:intron 25.0%
! TTTAATACTTACTACAACAG+TGG + chr7.4:6055226-6055245 None:intergenic 25.0%
!! AACTAATTTTCAGCTTAAAC+AGG + chr7.4:6054586-6054605 None:intergenic 25.0%
!! AATACATATCTGAAATGTGA+TGG + chr7.4:6051209-6051228 None:intergenic 25.0%
!! ACAAACTTTAAAAGTTTACC+TGG + chr7.4:6052859-6052878 None:intergenic 25.0%
!! CATTTGCTAACAAAAATGAA+AGG + chr7.4:6054982-6055001 None:intergenic 25.0%
!! CTATTAGAAGAGATTTTTGA+AGG - chr7.4:6053982-6054001 MS.gene28798:intron 25.0%
!! GTATTTTCATTGAGAAAATC+AGG - chr7.4:6052156-6052175 MS.gene28798:intron 25.0%
!! TTTTATAAGCTATATTAGGG+GGG - chr7.4:6050834-6050853 MS.gene28798:CDS 25.0%
!!! ATATAGTTTTTCTAAGACAC+TGG + chr7.4:6053386-6053405 None:intergenic 25.0%
!!! ATTAAGTTGAAAACAGCTTA+TGG - chr7.4:6050864-6050883 MS.gene28798:CDS 25.0%
!!! GAGTGTTTTTTTGTTTTGAA+TGG - chr7.4:6053653-6053672 MS.gene28798:intron 25.0%
!!! GTATGCTAATTTTTAGTATG+GGG - chr7.4:6051528-6051547 MS.gene28798:intron 25.0%
!!! TCCCTTATTTTGGTTATTAA+TGG - chr7.4:6050977-6050996 MS.gene28798:intron 25.0%
!!! TTGTTTTGAATGGAGTATTA+TGG - chr7.4:6053663-6053682 MS.gene28798:intron 25.0%
AAAGATGGAAAATGGATCAA+GGG + chr7.4:6054754-6054773 None:intergenic 30.0%
AACCCTTGAAGATTTGTATA+TGG - chr7.4:6051679-6051698 MS.gene28798:intron 30.0%
AACTAAGAAGAACTGCTTTA+GGG - chr7.4:6052019-6052038 MS.gene28798:intron 30.0%
AATACAAAATCCCCCTAATT+TGG - chr7.4:6053946-6053965 MS.gene28798:intron 30.0%
AATATACTAGTAGATGGGTA+TGG - chr7.4:6051860-6051879 MS.gene28798:intron 30.0%
ACCCATATACAAATCTTCAA+GGG + chr7.4:6051684-6051703 None:intergenic 30.0%
ACCCTTGAAGATTTGTATAT+GGG - chr7.4:6051680-6051699 MS.gene28798:intron 30.0%
ACTTATTCGAAATTATCGAG+TGG + chr7.4:6050945-6050964 None:intergenic 30.0%
AGGGACAAAAGAAATATGTT+AGG + chr7.4:6055511-6055530 None:intergenic 30.0%
ATACAAAATCCCCCTAATTT+GGG - chr7.4:6053947-6053966 MS.gene28798:intron 30.0%
ATATACTAGTAGATGGGTAT+GGG - chr7.4:6051861-6051880 MS.gene28798:intron 30.0%
ATCAAAATAGCACCACAATA+AGG + chr7.4:6055883-6055902 None:intergenic 30.0%
ATTATGTTGTCATGTGTAAG+TGG - chr7.4:6051468-6051487 MS.gene28798:intron 30.0%
ATTGTAATTATCAGGTTTGG+AGG - chr7.4:6052341-6052360 MS.gene28798:intron 30.0%
CCACTATTCATGTATTATCA+TGG - chr7.4:6052190-6052209 MS.gene28798:intron 30.0%
CCATGATAATACATGAATAG+TGG + chr7.4:6052193-6052212 None:intergenic 30.0%
CTAAGAAAAGCAGTTATAGA+AGG - chr7.4:6051307-6051326 MS.gene28798:CDS 30.0%
CTTAAAAGCTAGCTATCAAA+GGG + chr7.4:6053305-6053324 None:intergenic 30.0%
GACATTTCATTGTATGATTG+TGG - chr7.4:6052588-6052607 MS.gene28798:intron 30.0%
GGTTAACTAACAAAAAATGG+GGG + chr7.4:6055794-6055813 None:intergenic 30.0%
GTATTAAACAGTAACTAGCA+TGG - chr7.4:6055238-6055257 MS.gene28798:intron 30.0%
GTTAAGAACTAATCAAGCAA+AGG + chr7.4:6051173-6051192 None:intergenic 30.0%
TAAAAATTGATGCAGACATG+AGG + chr7.4:6051405-6051424 None:intergenic 30.0%
TAAACACCTTGATGAACATT+TGG - chr7.4:6055396-6055415 MS.gene28798:intron 30.0%
TAGACATGCTTATAAGTGTA+GGG + chr7.4:6052948-6052967 None:intergenic 30.0%
TATGATAAGTATGGTGAAGA+GGG - chr7.4:6051064-6051083 MS.gene28798:intron 30.0%
TGCTAATGTCAAATACGTAA+GGG - chr7.4:6052787-6052806 MS.gene28798:intron 30.0%
TGTGAATCATGTCAAATGAT+AGG + chr7.4:6054452-6054471 None:intergenic 30.0%
TTAAAAGCTAGCTATCAAAG+GGG + chr7.4:6053304-6053323 None:intergenic 30.0%
TTAGACATGCTTATAAGTGT+AGG + chr7.4:6052949-6052968 None:intergenic 30.0%
TTATGATAAGTATGGTGAAG+AGG - chr7.4:6051063-6051082 MS.gene28798:intron 30.0%
TTCTTGGTTAGAATACATTC+AGG - chr7.4:6055682-6055701 MS.gene28798:CDS 30.0%
TTGTAATTATCAGGTTTGGA+GGG - chr7.4:6052342-6052361 MS.gene28798:intron 30.0%
TTTAGTTGTACCTTACCTTT+CGG - chr7.4:6055161-6055180 MS.gene28798:CDS 30.0%
TTTCACTCCTCTATATTACT+TGG + chr7.4:6054692-6054711 None:intergenic 30.0%
TTTCGAGAAACGGTAATAAA+AGG + chr7.4:6050410-6050429 None:intergenic 30.0%
! AATAACACTTTGAGAATGGT+TGG + chr7.4:6054781-6054800 None:intergenic 30.0%
! ACCTCATGAACTTTTCAAAA+GGG - chr7.4:6055078-6055097 MS.gene28798:intron 30.0%
! AGGTGTGTTTCAATGTTTTT+GGG + chr7.4:6055491-6055510 None:intergenic 30.0%
! ATGTGATGGTGTTAACTTAT+AGG + chr7.4:6051195-6051214 None:intergenic 30.0%
! ATGTTCATCAAGGTGTTTAA+CGG + chr7.4:6055395-6055414 None:intergenic 30.0%
! GCAAAATAACACTTTGAGAA+TGG + chr7.4:6054785-6054804 None:intergenic 30.0%
! TAGGTGTGTTTCAATGTTTT+TGG + chr7.4:6055492-6055511 None:intergenic 30.0%
! TTATTAGCTTCTTCATTTCC+CGG + chr7.4:6050583-6050602 None:intergenic 30.0%
!! ATACAAACAGTCCCTTATTT+TGG - chr7.4:6050967-6050986 MS.gene28798:intron 30.0%
!! TCAACAACATTTTCGAGAAA+CGG + chr7.4:6050420-6050439 None:intergenic 30.0%
!! TTAAGAGAAGTGCTATGATA+GGG - chr7.4:6053471-6053490 MS.gene28798:intron 30.0%
!!! AATTTTTTGGCTCAAGCTAA+AGG + chr7.4:6054155-6054174 None:intergenic 30.0%
!!! ATTTTGAGTTTCCCCAAATT+AGG + chr7.4:6053962-6053981 None:intergenic 30.0%
!!! CTTTGATAGCTAGCTTTTAA+GGG - chr7.4:6053304-6053323 MS.gene28798:intron 30.0%
!!! TAATTTTTAGTATGGGGTTC+TGG - chr7.4:6051534-6051553 MS.gene28798:intron 30.0%
!!! TTTTGAGTTTCCCCAAATTA+GGG + chr7.4:6053961-6053980 None:intergenic 30.0%
!!! TTTTTTCCTTATGTGCTTGA+GGG - chr7.4:6052665-6052684 MS.gene28798:intron 30.0%
AAAGGCTCTATTTGGGAATT+TGG + chr7.4:6054137-6054156 None:intergenic 35.0%
AAATTTGCGGAGATTAGCAA+TGG - chr7.4:6050604-6050623 MS.gene28798:intron 35.0%
AACTAATCAAGCAAAGGCTA+AGG + chr7.4:6051167-6051186 None:intergenic 35.0%
AAGCAAGTAAGGAAGTTCAA+AGG - chr7.4:6055549-6055568 MS.gene28798:intron 35.0%
AATGTCAAATACGTAAGGGA+GGG - chr7.4:6052791-6052810 MS.gene28798:intron 35.0%
ACACCCTTAAAATTGAAGCT+AGG + chr7.4:6054562-6054581 None:intergenic 35.0%
ACAGAAAAATTACACGGCAA+TGG + chr7.4:6050384-6050403 None:intergenic 35.0%
ACAGAGAAGGAACAACAATT+TGG + chr7.4:6050339-6050358 None:intergenic 35.0%
ACTAAGAAGAACTGCTTTAG+GGG - chr7.4:6052020-6052039 MS.gene28798:intron 35.0%
ACTTGCGAATTCTACACTTT+GGG + chr7.4:6052290-6052309 None:intergenic 35.0%
AGCAAGTAAGGAAGTTCAAA+GGG - chr7.4:6055550-6055569 MS.gene28798:intron 35.0%
AGCAGTTATAGAAGGCTATT+AGG - chr7.4:6051315-6051334 MS.gene28798:CDS 35.0%
AGTGTTATCCAAAATCCGAA+AGG + chr7.4:6055179-6055198 None:intergenic 35.0%
ATGATAGGGACTTGCATATT+AGG - chr7.4:6053485-6053504 MS.gene28798:intron 35.0%
ATGGAGAATCTGGAGATTTA+AGG - chr7.4:6054945-6054964 MS.gene28798:intron 35.0%
CAACTAAGAAGAACTGCTTT+AGG - chr7.4:6052018-6052037 MS.gene28798:intron 35.0%
CAATTAGTCAAGTTTCGACT+TGG + chr7.4:6054856-6054875 None:intergenic 35.0%
CACCCATATACAAATCTTCA+AGG + chr7.4:6051685-6051704 None:intergenic 35.0%
CACCTAATCATGTTACATTG+AGG + chr7.4:6055733-6055752 None:intergenic 35.0%
CAGTGGTTCTTACTACTTTA+GGG - chr7.4:6053828-6053847 MS.gene28798:CDS 35.0%
CCAGATTCTCCATCAATTAT+GGG + chr7.4:6054938-6054957 None:intergenic 35.0%
CCTTAAAAGCTAGCTATCAA+AGG + chr7.4:6053306-6053325 None:intergenic 35.0%
CGTACAATAAACCAAATGGT+GGG + chr7.4:6053560-6053579 None:intergenic 35.0%
CTAACTCTATCAAATGGGAA+AGG - chr7.4:6054505-6054524 MS.gene28798:intron 35.0%
CTATGTTCTTGATGTGTATG+GGG - chr7.4:6051495-6051514 MS.gene28798:intron 35.0%
CTCAATGTAACATGATTAGG+TGG - chr7.4:6055731-6055750 MS.gene28798:CDS 35.0%
CTTGAAGATTTGTATATGGG+TGG - chr7.4:6051683-6051702 MS.gene28798:intron 35.0%
GAAAGATGGAAAATGGATCA+AGG + chr7.4:6054755-6054774 None:intergenic 35.0%
GAAGAAGAGAAAATTGCGAA+AGG - chr7.4:6051629-6051648 MS.gene28798:intron 35.0%
GACACATATATGTTACCCAT+TGG + chr7.4:6051786-6051805 None:intergenic 35.0%
GCACATAAGGAAAAAAGACA+AGG + chr7.4:6052661-6052680 None:intergenic 35.0%
GCAGTTATAGAAGGCTATTA+GGG - chr7.4:6051316-6051335 MS.gene28798:CDS 35.0%
GCTATGTTCTTGATGTGTAT+GGG - chr7.4:6051494-6051513 MS.gene28798:intron 35.0%
GGAAATAAAGAATAGCCTCT+GGG + chr7.4:6052085-6052104 None:intergenic 35.0%
GTAGAAATGAGGTTTATCAC+AGG - chr7.4:6052410-6052429 MS.gene28798:intron 35.0%
GTATCATCCTGATAAGAATC+CGG - chr7.4:6050561-6050580 MS.gene28798:intron 35.0%
GTCACTGTTGATATTGAGAA+AGG - chr7.4:6052821-6052840 MS.gene28798:intron 35.0%
GTCCTCAATGTAACATGATT+AGG - chr7.4:6055728-6055747 MS.gene28798:CDS 35.0%
GTGCTAATGTCAAATACGTA+AGG - chr7.4:6052786-6052805 MS.gene28798:intron 35.0%
GTGTAGGGCTTATAAGAAAA+TGG + chr7.4:6052933-6052952 None:intergenic 35.0%
GTTTCTTTCAGTTTCTTTGG+CGG - chr7.4:6051590-6051609 MS.gene28798:intron 35.0%
TAATGTCAAATACGTAAGGG+AGG - chr7.4:6052790-6052809 MS.gene28798:intron 35.0%
TACAAAATCCCCCTAATTTG+GGG - chr7.4:6053948-6053967 MS.gene28798:intron 35.0%
TATCATCCTGATAAGAATCC+GGG - chr7.4:6050562-6050581 MS.gene28798:intron 35.0%
TATCCAAAATCCGAAAGGTA+AGG + chr7.4:6055174-6055193 None:intergenic 35.0%
TCAAGCTAAAGGCTCTATTT+GGG + chr7.4:6054144-6054163 None:intergenic 35.0%
TCACAAATCCAAAGCAAGTA+AGG - chr7.4:6055538-6055557 MS.gene28798:intron 35.0%
TCAGTGGTTCTTACTACTTT+AGG - chr7.4:6053827-6053846 MS.gene28798:CDS 35.0%
TCCAGATTCTCCATCAATTA+TGG + chr7.4:6054939-6054958 None:intergenic 35.0%
TCTTCTTTGCTGCTCTTAAT+TGG - chr7.4:6055450-6055469 MS.gene28798:intron 35.0%
TCTTGTGTAAAAAGAGGGTA+AGG + chr7.4:6053586-6053605 None:intergenic 35.0%
TGAAGTTTATTAGGCGACAA+GGG + chr7.4:6054407-6054426 None:intergenic 35.0%
TGATAGGGACTTGCATATTA+GGG - chr7.4:6053486-6053505 MS.gene28798:intron 35.0%
TGCAGCTAACTCTATCAAAT+GGG - chr7.4:6054500-6054519 MS.gene28798:intron 35.0%
TGCTATGTTCTTGATGTGTA+TGG - chr7.4:6051493-6051512 MS.gene28798:intron 35.0%
TGGAGAATCTGGAGATTTAA+GGG - chr7.4:6054946-6054965 MS.gene28798:intron 35.0%
TGGTGTAGTTGTAAACTAAG+TGG - chr7.4:6052210-6052229 MS.gene28798:intron 35.0%
TGTCTACCAAATGTTCATCA+AGG + chr7.4:6055405-6055424 None:intergenic 35.0%
TTACAACAAATACACGCCTT+AGG - chr7.4:6055761-6055780 MS.gene28798:CDS 35.0%
TTCTTTGTGCTCATATGCAA+TGG + chr7.4:6055585-6055604 None:intergenic 35.0%
TTGAACTTCCTTACTTGCTT+TGG + chr7.4:6055549-6055568 None:intergenic 35.0%
TTGCAGCTAACTCTATCAAA+TGG - chr7.4:6054499-6054518 MS.gene28798:intron 35.0%
TTGCATATGAGCACAAAGAA+AGG - chr7.4:6055585-6055604 MS.gene28798:intron 35.0%
TTGGTGAGAAAGATGGAAAA+TGG + chr7.4:6054762-6054781 None:intergenic 35.0%
TTTCCAGGACTTGCATATTA+TGG - chr7.4:6053631-6053650 MS.gene28798:intron 35.0%
TTTCTTTCAGTTTCTTTGGC+GGG - chr7.4:6051591-6051610 MS.gene28798:intron 35.0%
TTTGAAAAGTTCATGAGGTG+CGG + chr7.4:6055077-6055096 None:intergenic 35.0%
! AAATTTTCTCAGCTGATCAG+TGG - chr7.4:6054249-6054268 MS.gene28798:intron 35.0%
! ACACTTGTTGATTGTGCAAA+CGG - chr7.4:6055276-6055295 MS.gene28798:intron 35.0%
! ACATATTTCTTTTGTCCCTC+AGG - chr7.4:6055512-6055531 MS.gene28798:intron 35.0%
! ACGACCTAGCTTCAATTTTA+AGG - chr7.4:6054555-6054574 MS.gene28798:CDS 35.0%
! ATTGAGAAAGGCATGAAAGA+TGG - chr7.4:6052833-6052852 MS.gene28798:intron 35.0%
! CACCTCATGAACTTTTCAAA+AGG - chr7.4:6055077-6055096 MS.gene28798:intron 35.0%
! CATATTTCTTTTGTCCCTCA+GGG - chr7.4:6055513-6055532 MS.gene28798:intron 35.0%
! CATGAACTTTTCAAAAGGGA+AGG - chr7.4:6055082-6055101 MS.gene28798:intron 35.0%
! CCTCTATATTACTTGGTAGT+CGG + chr7.4:6054685-6054704 None:intergenic 35.0%
! CGACCTAGCTTCAATTTTAA+GGG - chr7.4:6054556-6054575 MS.gene28798:CDS 35.0%
! GTCATTTGTTGAAACATTCC+AGG + chr7.4:6052445-6052464 None:intergenic 35.0%
! TGTGGCATATTCAAAGCTTT+TGG + chr7.4:6054716-6054735 None:intergenic 35.0%
! TTACCCTCTTTTTACACAAG+AGG - chr7.4:6053585-6053604 MS.gene28798:intron 35.0%
! TTTGAGTTTCCCCAAATTAG+GGG + chr7.4:6053960-6053979 None:intergenic 35.0%
! TTTTTCCTTATGTGCTTGAG+GGG - chr7.4:6052666-6052685 MS.gene28798:intron 35.0%
!! CTTAAGAGAAGTGCTATGAT+AGG - chr7.4:6053470-6053489 MS.gene28798:intron 35.0%
!! GATATACTTCAAGTGTCGAA+AGG - chr7.4:6050490-6050509 MS.gene28798:intron 35.0%
!! GGTGTGTTTCAATGTTTTTG+GGG + chr7.4:6055490-6055509 None:intergenic 35.0%
!! TACTACTTTAGGGTCTGTTT+GGG - chr7.4:6053838-6053857 MS.gene28798:CDS 35.0%
!! TCCCTTTTGAAAAGTTCATG+AGG + chr7.4:6055082-6055101 None:intergenic 35.0%
!! TTACTACTTTAGGGTCTGTT+TGG - chr7.4:6053837-6053856 MS.gene28798:CDS 35.0%
!!! AGATCTTTACGTCACTTTTG+AGG - chr7.4:6055608-6055627 MS.gene28798:intron 35.0%
!!! ATTTTTTGTCCTTTCACAGG+AGG - chr7.4:6054889-6054908 MS.gene28798:intron 35.0%
!!! CCTTTGATAGCTAGCTTTTA+AGG - chr7.4:6053303-6053322 MS.gene28798:intron 35.0%
!!! CTTTTTTCCTTATGTGCTTG+AGG - chr7.4:6052664-6052683 MS.gene28798:intron 35.0%
!!! GCAATTTTTTGTCCTTTCAC+AGG - chr7.4:6054886-6054905 MS.gene28798:intron 35.0%
!!! TGCTTGTTTTAGTCCTTAAG+TGG - chr7.4:6053718-6053737 MS.gene28798:intron 35.0%
!!! TGTGGTGCTATTTTGATACA+AGG - chr7.4:6055886-6055905 MS.gene28798:CDS 35.0%
!!! TGTTTCAATGTTTTTGGGGT+GGG + chr7.4:6055486-6055505 None:intergenic 35.0%
AAAATAGCACCTCCTGTGAA+AGG + chr7.4:6054901-6054920 None:intergenic 40.0%
AAGCTATATTAGGGGGGTTA+TGG - chr7.4:6050840-6050859 MS.gene28798:CDS 40.0%
AATAGCATAGAGCACAGAGA+AGG + chr7.4:6050352-6050371 None:intergenic 40.0%
AATATGCAAGTCCTGGAAAC+AGG + chr7.4:6053630-6053649 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAG+AGG + chr7.4:6053592-6053611 None:intergenic 40.0%
ACGCTGTAACTGTAGAAATG+AGG - chr7.4:6052399-6052418 MS.gene28798:intron 40.0%
ACTCCATAATATGCAAGTCC+TGG + chr7.4:6053637-6053656 None:intergenic 40.0%
AGACTGCTTGAAAGAGCTTA+TGG + chr7.4:6050908-6050927 None:intergenic 40.0%
AGCTATGCATATGGTCATCT+GGG + chr7.4:6053808-6053827 None:intergenic 40.0%
AGGTTTATCACAGGCAAATC+GGG - chr7.4:6052419-6052438 MS.gene28798:intron 40.0%
AGTAACTAGCATGGAAGAGT+TGG - chr7.4:6055247-6055266 MS.gene28798:intron 40.0%
AGTGCTTATGAAATGGTACC+TGG - chr7.4:6053352-6053371 MS.gene28798:intron 40.0%
ATATGCAAGTCCTGGAAACA+GGG + chr7.4:6053629-6053648 None:intergenic 40.0%
ATATGGAAGAGACACCAGAA+AGG - chr7.4:6053404-6053423 MS.gene28798:CDS 40.0%
ATGCGATGCTCTAATTAGCT+TGG - chr7.4:6053274-6053293 MS.gene28798:intron 40.0%
ATTTGGGAATTTGGAGGGAA+GGG + chr7.4:6054128-6054147 None:intergenic 40.0%
CAACAAGAGCTTGAACCTAA+AGG + chr7.4:6055360-6055379 None:intergenic 40.0%
CACGCTGGTAAGTATAATCA+TGG - chr7.4:6055132-6055151 MS.gene28798:CDS 40.0%
CAGCCTCTTGTGTAAAAAGA+GGG + chr7.4:6053591-6053610 None:intergenic 40.0%
CCCATAATTGATGGAGAATC+TGG - chr7.4:6054935-6054954 MS.gene28798:intron 40.0%
CCGACTACCAAGTAATATAG+AGG - chr7.4:6054682-6054701 MS.gene28798:intron 40.0%
CTCAAGCTAAAGGCTCTATT+TGG + chr7.4:6054145-6054164 None:intergenic 40.0%
CTGTAATCGGAACCTTCATA+TGG - chr7.4:6051358-6051377 MS.gene28798:intron 40.0%
CTTGAACCTAAAGGAGATCA+AGG + chr7.4:6055351-6055370 None:intergenic 40.0%
GACTTGCGAATTCTACACTT+TGG + chr7.4:6052291-6052310 None:intergenic 40.0%
GAGGTTTATCACAGGCAAAT+CGG - chr7.4:6052418-6052437 MS.gene28798:intron 40.0%
GCAAGTAAGGAAGTTCAAAG+GGG - chr7.4:6055551-6055570 MS.gene28798:intron 40.0%
GCAGGTAAATATCATCTTCG+AGG - chr7.4:6052468-6052487 MS.gene28798:intron 40.0%
GCGTACAATAAACCAAATGG+TGG + chr7.4:6053561-6053580 None:intergenic 40.0%
GCTCTATTTGGGAATTTGGA+GGG + chr7.4:6054133-6054152 None:intergenic 40.0%
GCTGCGTACAATAAACCAAA+TGG + chr7.4:6053564-6053583 None:intergenic 40.0%
GGGAAATAAAGAATAGCCTC+TGG + chr7.4:6052086-6052105 None:intergenic 40.0%
GGGTAAAAAAGAAAGCAGTG+TGG + chr7.4:6054734-6054753 None:intergenic 40.0%
GTGAAGTTTATTAGGCGACA+AGG + chr7.4:6054408-6054427 None:intergenic 40.0%
GTGCTTATGAAATGGTACCT+GGG - chr7.4:6053353-6053372 MS.gene28798:intron 40.0%
GTGCTTGAGTGCTTATGAAA+TGG - chr7.4:6053345-6053364 MS.gene28798:intron 40.0%
GTGTAACCTTGATCTCCTTT+AGG - chr7.4:6055342-6055361 MS.gene28798:intron 40.0%
GTTTCAACAAATGACAGAGC+AGG - chr7.4:6052450-6052469 MS.gene28798:intron 40.0%
TAATAGCCAAGTCCCTATCA+GGG + chr7.4:6053226-6053245 None:intergenic 40.0%
TAGAAGCCAGTGTATTTGCA+GGG + chr7.4:6052553-6052572 None:intergenic 40.0%
TAGATTCGCGACTATCATAC+TGG - chr7.4:6051885-6051904 MS.gene28798:intron 40.0%
TAGCACATTGATCACAAACC+TGG + chr7.4:6052772-6052791 None:intergenic 40.0%
TATTTACCCTGATAGGGACT+TGG - chr7.4:6053217-6053236 MS.gene28798:intron 40.0%
TATTTGGGAATTTGGAGGGA+AGG + chr7.4:6054129-6054148 None:intergenic 40.0%
TCATAAGCACTCAAGCACTT+GGG + chr7.4:6053343-6053362 None:intergenic 40.0%
TCATTTCCCGGATTCTTATC+AGG + chr7.4:6050571-6050590 None:intergenic 40.0%
TTAAGTGCCAAACGACTCAA+TGG + chr7.4:6053455-6053474 None:intergenic 40.0%
TTCATAAGCACTCAAGCACT+TGG + chr7.4:6053344-6053363 None:intergenic 40.0%
TTCTTTCAGTTTCTTTGGCG+GGG - chr7.4:6051592-6051611 MS.gene28798:intron 40.0%
TTGAGTTTCCCCAAATTAGG+GGG + chr7.4:6053959-6053978 None:intergenic 40.0%
TTGGATTTGTGATTCCCTGA+GGG + chr7.4:6055530-6055549 None:intergenic 40.0%
TTTGGATTTGTGATTCCCTG+AGG + chr7.4:6055531-6055550 None:intergenic 40.0%
TTTGGTAGACATAAGCTCGA+AGG - chr7.4:6055414-6055433 MS.gene28798:intron 40.0%
! ATTTTGCCCTGCAAATACAC+TGG - chr7.4:6052544-6052563 MS.gene28798:intron 40.0%
! CGACGACGTTATTGTTGATT+TGG - chr7.4:6051652-6051671 MS.gene28798:intron 40.0%
! CTTTAGGTTCAAGCTCTTGT+TGG - chr7.4:6055358-6055377 MS.gene28798:intron 40.0%
! GTACCTTACCTTTCGGATTT+TGG - chr7.4:6055168-6055187 MS.gene28798:CDS 40.0%
!! ACTACTTTAGGGTCTGTTTG+GGG - chr7.4:6053839-6053858 MS.gene28798:CDS 40.0%
!! AGAATGGTTGGTGAGAAAGA+TGG + chr7.4:6054769-6054788 None:intergenic 40.0%
!! GTCAGCATATGAGGTATTGT+CGG - chr7.4:6051021-6051040 MS.gene28798:intron 40.0%
!! GTTTTAGTCCTTAAGTGGCT+TGG - chr7.4:6053723-6053742 MS.gene28798:intron 40.0%
!!! ACAGGAGGTGCTATTTTATG+AGG - chr7.4:6054904-6054923 MS.gene28798:intron 40.0%
!!! GAGGTGCTATTTTATGAGGA+CGG - chr7.4:6054908-6054927 MS.gene28798:intron 40.0%
!!! GTGTTTCAATGTTTTTGGGG+TGG + chr7.4:6055487-6055506 None:intergenic 40.0%
AAAGCTAGCTATCAAAGGGG+AGG + chr7.4:6053301-6053320 None:intergenic 45.0%
AACACGGTTGCTCATGTTCT+TGG + chr7.4:6054384-6054403 None:intergenic 45.0%
AATGTTGTAAAGCCAGCTCC+TGG - chr7.4:6052370-6052389 MS.gene28798:intron 45.0%
ACACGGTTGCTCATGTTCTT+GGG + chr7.4:6054383-6054402 None:intergenic 45.0%
ACTTGCATATTAGGGCAACC+CGG - chr7.4:6053494-6053513 MS.gene28798:intron 45.0%
AGTAAGGAAGTTCAAAGGGG+AGG - chr7.4:6055554-6055573 MS.gene28798:intron 45.0%
AGTGCATCCATTGAGTCGTT+TGG - chr7.4:6053445-6053464 MS.gene28798:CDS 45.0%
CATTGATCACAAACCTGGAC+AGG + chr7.4:6052767-6052786 None:intergenic 45.0%
CTAGAAGCCAGTGTATTTGC+AGG + chr7.4:6052554-6052573 None:intergenic 45.0%
CTGACATCATGTATTCCCAG+AGG - chr7.4:6052067-6052086 MS.gene28798:intron 45.0%
GAACCACTGAGCTATGCATA+TGG + chr7.4:6053817-6053836 None:intergenic 45.0%
GAGCTATGCATATGGTCATC+TGG + chr7.4:6053809-6053828 None:intergenic 45.0%
GATAGGGACTTGGCTATTAC+TGG - chr7.4:6053227-6053246 MS.gene28798:intron 45.0%
GCATCTACTGTGATCCTTGT+CGG - chr7.4:6055847-6055866 MS.gene28798:intron 45.0%
GGCTCTATTTGGGAATTTGG+AGG + chr7.4:6054134-6054153 None:intergenic 45.0%
GGGAAAAACCAAGCCACTTA+AGG + chr7.4:6053734-6053753 None:intergenic 45.0%
GTAAGGAAGTTCAAAGGGGA+GGG - chr7.4:6055555-6055574 MS.gene28798:intron 45.0%
GTAATAGCCAAGTCCCTATC+AGG + chr7.4:6053227-6053246 None:intergenic 45.0%
GTATATGGGTGGTTCCTTGA+AGG - chr7.4:6051694-6051713 MS.gene28798:intron 45.0%
GTCGGAACTGATGTCAAACA+AGG + chr7.4:6054667-6054686 None:intergenic 45.0%
TAAATGTGACCGCACCTTCA+AGG + chr7.4:6051711-6051730 None:intergenic 45.0%
TATTAGGCGACAAGGGAACA+CGG + chr7.4:6054400-6054419 None:intergenic 45.0%
TCTTTCAGTTTCTTTGGCGG+GGG - chr7.4:6051593-6051612 MS.gene28798:intron 45.0%
TGACCATATGCATAGCTCAG+TGG - chr7.4:6053811-6053830 MS.gene28798:CDS 45.0%
TGTGTGATATCTACCTGTCC+AGG - chr7.4:6052751-6052770 MS.gene28798:intron 45.0%
TTATGAAATGGTACCTGGGC+AGG - chr7.4:6053357-6053376 MS.gene28798:intron 45.0%
TTTCTGTTCCTCCGATAGTG+AGG + chr7.4:6055646-6055665 None:intergenic 45.0%
TTTGGGAATTTGGAGGGAAG+GGG + chr7.4:6054127-6054146 None:intergenic 45.0%
! CAGTTACAGCGTCTTTTTCC+AGG + chr7.4:6052391-6052410 None:intergenic 45.0%
! TCTGTTTGGGGGTTTAGGAT+GGG - chr7.4:6053851-6053870 MS.gene28798:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr7.4:6053596-6053615 MS.gene28798:intron 45.0%
!! CTACTTTAGGGTCTGTTTGG+GGG - chr7.4:6053840-6053859 MS.gene28798:CDS 45.0%
!! TCAAGTGTCGAAAGGTGCAT+CGG - chr7.4:6050498-6050517 MS.gene28798:intron 45.0%
!! TTTTAGGAGGAAGGGCTTTG+GGG - chr7.4:6053906-6053925 MS.gene28798:intron 45.0%
!!! AAGGAATGGAGGGTTTTAGG+AGG - chr7.4:6053893-6053912 MS.gene28798:intron 45.0%
!!! AAGTGGCTTGGTTTTTCCCA+TGG - chr7.4:6053735-6053754 MS.gene28798:intron 45.0%
!!! AATGGAGGGTTTTAGGAGGA+AGG - chr7.4:6053897-6053916 MS.gene28798:intron 45.0%
!!! ATGGAGGGTTTTAGGAGGAA+GGG - chr7.4:6053898-6053917 MS.gene28798:intron 45.0%
!!! GGGTTCTGGACTTGCTTTTA+TGG - chr7.4:6051548-6051567 MS.gene28798:intron 45.0%
!!! GTTTTAGGAGGAAGGGCTTT+GGG - chr7.4:6053905-6053924 MS.gene28798:intron 45.0%
!!! TCCCATGGCAGCTAGTTTTA+CGG - chr7.4:6053750-6053769 MS.gene28798:intron 45.0%
!! AAATAAATATTATAATTGTT+GGG + chr7.4:6053202-6053221 None:intergenic 5.0%
!! AATTTAATAATATCAATAAA+AGG + chr7.4:6054234-6054253 None:intergenic 5.0%
!! TAAATAAATATTATAATTGT+TGG + chr7.4:6053203-6053222 None:intergenic 5.0%
AAAGTTCATGAGGTGCGGTG+CGG + chr7.4:6055072-6055091 None:intergenic 50.0%
AATTCAGCACCCCAAGCATG+TGG + chr7.4:6053784-6053803 None:intergenic 50.0%
ACGTTAAGCGGAAGGAATGG+AGG - chr7.4:6053882-6053901 MS.gene28798:CDS 50.0%
AGGACGTTAAGCGGAAGGAA+TGG - chr7.4:6053879-6053898 MS.gene28798:CDS 50.0%
AGGACTTGAACCCTGTTTCC+AGG - chr7.4:6053616-6053635 MS.gene28798:intron 50.0%
ATTCAGCACCCCAAGCATGT+GGG + chr7.4:6053783-6053802 None:intergenic 50.0%
ATTGAAGCTCCCGCATATGC+AGG - chr7.4:6053520-6053539 MS.gene28798:intron 50.0%
CACTCAAGCACTTGGGAGTT+GGG + chr7.4:6053336-6053355 None:intergenic 50.0%
CCCGTAAAACTAGCTGCCAT+GGG + chr7.4:6053754-6053773 None:intergenic 50.0%
CGTTAAGCGGAAGGAATGGA+GGG - chr7.4:6053883-6053902 MS.gene28798:CDS 50.0%
CTTATGTGCTTGAGGGGACT+GGG - chr7.4:6052672-6052691 MS.gene28798:intron 50.0%
GTCTGTTTGGGGGTTTAGGA+TGG - chr7.4:6053850-6053869 MS.gene28798:CDS 50.0%
GTTGCTGCTGTCAGCATATG+AGG - chr7.4:6051012-6051031 MS.gene28798:intron 50.0%
TAGGGTCTGTTTGGGGGTTT+AGG - chr7.4:6053846-6053865 MS.gene28798:CDS 50.0%
TCCCGTAAAACTAGCTGCCA+TGG + chr7.4:6053755-6053774 None:intergenic 50.0%
TCTGTTCCCCACCTCACTAT+CGG - chr7.4:6055632-6055651 MS.gene28798:intron 50.0%
TCTTGATGTGTATGGGGCTC+TGG - chr7.4:6051501-6051520 MS.gene28798:intron 50.0%
TGGAAACAGGGTTCAAGTCC+TGG + chr7.4:6053617-6053636 None:intergenic 50.0%
TGTTCCTCCGATAGTGAGGT+GGG + chr7.4:6055642-6055661 None:intergenic 50.0%
TTATGTGCTTGAGGGGACTG+GGG - chr7.4:6052673-6052692 MS.gene28798:intron 50.0%
TTGAAGCTCCCGCATATGCA+GGG - chr7.4:6053521-6053540 MS.gene28798:intron 50.0%
TTTCTTTGGCGGGGGATCAA+TGG - chr7.4:6051601-6051620 MS.gene28798:intron 50.0%
! CGGAAGGAATGGAGGGTTTT+AGG - chr7.4:6053890-6053909 MS.gene28798:intron 50.0%
! GAAAGGCATGAAAGATGGCC+AGG - chr7.4:6052838-6052857 MS.gene28798:intron 50.0%
! GGCACATGAGTGCCTTATTG+TGG - chr7.4:6055868-6055887 MS.gene28798:intron 50.0%
! TTTGGGGGTTTAGGATGGGA+GGG - chr7.4:6053855-6053874 MS.gene28798:CDS 50.0%
!! AGGTGGTGGAATGAACATGC+AGG - chr7.4:6051117-6051136 MS.gene28798:intron 50.0%
!!! ACTGGTTTTCACGTGACACG+CGG - chr7.4:6051903-6051922 MS.gene28798:intron 50.0%
!!! ATGGCAGCTAGTTTTACGGG+AGG - chr7.4:6053754-6053773 MS.gene28798:intron 50.0%
!!! CCCATGGCAGCTAGTTTTAC+GGG - chr7.4:6053751-6053770 MS.gene28798:intron 50.0%
!!! GGTTTTAGGAGGAAGGGCTT+TGG - chr7.4:6053904-6053923 MS.gene28798:intron 50.0%
!!! TGGCAGCTAGTTTTACGGGA+GGG - chr7.4:6053755-6053774 MS.gene28798:intron 50.0%
AAATGGGGGCGAGAAGCCTA+AGG + chr7.4:6055780-6055799 None:intergenic 55.0%
AACGCTCGACTCAGCCTTTC+TGG + chr7.4:6053421-6053440 None:intergenic 55.0%
AAGACACTGGAAACCTGCCC+AGG + chr7.4:6053373-6053392 None:intergenic 55.0%
ATGCGGGAGCTTCAATGCAC+CGG + chr7.4:6053516-6053535 None:intergenic 55.0%
CACGACTGTCACTATCACGC+TGG - chr7.4:6055117-6055136 MS.gene28798:CDS 55.0%
CCAGTCCCCTCAAGCACATA+AGG + chr7.4:6052674-6052693 None:intergenic 55.0%
CCTTATGTGCTTGAGGGGAC+TGG - chr7.4:6052671-6052690 MS.gene28798:intron 55.0%
CTGTTCCTCCGATAGTGAGG+TGG + chr7.4:6055643-6055662 None:intergenic 55.0%
GACGGCGAGCCCATAATTGA+TGG - chr7.4:6054926-6054945 MS.gene28798:intron 55.0%
GCACTCAAGCACTTGGGAGT+TGG + chr7.4:6053337-6053356 None:intergenic 55.0%
GGAATTTGGAGGGAAGGGGA+GGG + chr7.4:6054123-6054142 None:intergenic 55.0%
GTTCCTCCGATAGTGAGGTG+GGG + chr7.4:6055641-6055660 None:intergenic 55.0%
TATCACAGGCAAATCGGGCC+TGG - chr7.4:6052424-6052443 MS.gene28798:intron 55.0%
TGGGTGGTTCCTTGAAGGTG+CGG - chr7.4:6051699-6051718 MS.gene28798:intron 55.0%
! AAGGCACTCATGTGCCGACA+AGG + chr7.4:6055864-6055883 None:intergenic 55.0%
! CAGCGTCTTTTTCCAGGAGC+TGG + chr7.4:6052385-6052404 None:intergenic 55.0%
! GTTTGGGGGTTTAGGATGGG+AGG - chr7.4:6053854-6053873 MS.gene28798:CDS 55.0%
! TTGGGGGTTTAGGATGGGAG+GGG - chr7.4:6053856-6053875 MS.gene28798:CDS 55.0%
ACCACCTCTTCCTCCACCAG+CGG + chr7.4:6051104-6051123 None:intergenic 60.0%
AGGGGAGGACGTTAAGCGGA+AGG - chr7.4:6053874-6053893 MS.gene28798:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr7.4:6053533-6053552 MS.gene28798:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr7.4:6053533-6053552 None:intergenic 60.0%
CTTTGGCGGGGGATCAATGG+AGG - chr7.4:6051604-6051623 MS.gene28798:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr7.4:6053532-6053551 MS.gene28798:intron 60.0%
GGAGGGTTCCCACATGCTTG+GGG - chr7.4:6053772-6053791 MS.gene28798:intron 60.0%
GGGAATTTGGAGGGAAGGGG+AGG + chr7.4:6054124-6054143 None:intergenic 60.0%
GGGAGGGTTCCCACATGCTT+GGG - chr7.4:6053771-6053790 MS.gene28798:intron 60.0%
GTTCCCCACCTCACTATCGG+AGG - chr7.4:6055635-6055654 MS.gene28798:CDS 60.0%
TGCGGGAGCTTCAATGCACC+GGG + chr7.4:6053515-6053534 None:intergenic 60.0%
TGGGAGGGGAGGACGTTAAG+CGG - chr7.4:6053870-6053889 MS.gene28798:CDS 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr7.4:6053532-6053551 None:intergenic 60.0%
TTGAAGCAGCATGCCGCTGG+TGG - chr7.4:6051088-6051107 MS.gene28798:intron 60.0%
TTGAGGGGACTGGGGTGTGA+AGG - chr7.4:6052681-6052700 MS.gene28798:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr7.4:6053548-6053567 None:intergenic 60.0%
! GGTTTGAAGCAGCATGCCGC+TGG - chr7.4:6051085-6051104 MS.gene28798:intron 60.0%
AAGCAGCATGCCGCTGGTGG+AGG - chr7.4:6051091-6051110 MS.gene28798:intron 65.0%
CATGCCGCTGGTGGAGGAAG+AGG - chr7.4:6051097-6051116 MS.gene28798:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr7.4:6053531-6053550 MS.gene28798:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr7.4:6053546-6053565 MS.gene28798:intron 65.0%
CGGGAGGGTTCCCACATGCT+TGG - chr7.4:6053770-6053789 MS.gene28798:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr7.4:6053527-6053546 MS.gene28798:intron 65.0%
GAGGGAAGGGGAGGGCTTTG+GGG + chr7.4:6054115-6054134 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr7.4:6053526-6053545 MS.gene28798:intron 65.0%
GCTGGTGGAGGAAGAGGTGG+TGG - chr7.4:6051103-6051122 MS.gene28798:intron 65.0%
GGAGGGAAGGGGAGGGCTTT+GGG + chr7.4:6054116-6054135 None:intergenic 65.0%
TGGAGGGAAGGGGAGGGCTT+TGG + chr7.4:6054117-6054136 None:intergenic 65.0%
! AGGGAAGGGGAGGGCTTTGG+GGG + chr7.4:6054114-6054133 None:intergenic 65.0%
! GGGGTTTAGGATGGGAGGGG+AGG - chr7.4:6053859-6053878 MS.gene28798:CDS 65.0%
!! AGGGGAGGGCTTTGGGGGAT+TGG + chr7.4:6054109-6054128 None:intergenic 65.0%
GCCGCTGGTGGAGGAAGAGG+TGG - chr7.4:6051100-6051119 MS.gene28798:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 6050320 6055940 6050320 ID=MS.gene28798
chr7.4 mRNA 6050320 6055940 6050320 ID=MS.gene28798.t1;Parent=MS.gene28798
chr7.4 exon 6055870 6055940 6055870 ID=MS.gene28798.t1.exon1;Parent=MS.gene28798.t1
chr7.4 CDS 6055870 6055940 6055870 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6055635 6055783 6055635 ID=MS.gene28798.t1.exon2;Parent=MS.gene28798.t1
chr7.4 CDS 6055635 6055783 6055635 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6055108 6055234 6055108 ID=MS.gene28798.t1.exon3;Parent=MS.gene28798.t1
chr7.4 CDS 6055108 6055234 6055108 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6054545 6054659 6054545 ID=MS.gene28798.t1.exon4;Parent=MS.gene28798.t1
chr7.4 CDS 6054545 6054659 6054545 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6053789 6053905 6053789 ID=MS.gene28798.t1.exon5;Parent=MS.gene28798.t1
chr7.4 CDS 6053789 6053905 6053789 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6053401 6053487 6053401 ID=MS.gene28798.t1.exon6;Parent=MS.gene28798.t1
chr7.4 CDS 6053401 6053487 6053401 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6051293 6051352 6051293 ID=MS.gene28798.t1.exon7;Parent=MS.gene28798.t1
chr7.4 CDS 6051293 6051352 6051293 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6051122 6051199 6051122 ID=MS.gene28798.t1.exon8;Parent=MS.gene28798.t1
chr7.4 CDS 6051122 6051199 6051122 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6050825 6050896 6050825 ID=MS.gene28798.t1.exon9;Parent=MS.gene28798.t1
chr7.4 CDS 6050825 6050896 6050825 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6050631 6050726 6050631 ID=MS.gene28798.t1.exon10;Parent=MS.gene28798.t1
chr7.4 CDS 6050631 6050726 6050631 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
chr7.4 exon 6050320 6050352 6050320 ID=MS.gene28798.t1.exon11;Parent=MS.gene28798.t1
chr7.4 CDS 6050320 6050352 6050320 ID=cds.MS.gene28798.t1;Parent=MS.gene28798.t1
Gene Sequence

>MS.gene28798

ATGGCGCATCAAAGAGCCAAATTGTTGTTCCTTCTCTGTGCTCTATGCTATTCTCTCAGCGCCATTGCCGTGTAATTTTTCTGTTTTCCTTTTATTACCGTTTCTCGAAAATGTTGTTGATTCTACATTTGCTTATAAATCTATGTTTGGTATGCAGAAAGAGTTATTACGATATACTTCAAGTGTCGAAAGGTGCATCGGATGATCAGATTAAGAGAGCGTATAGAAAGCTTGCATTGAAGTATCATCCTGATAAGAATCCGGGAAATGAAGAAGCTAATAAGAAATTTGCGGAGATTAGCAATGGTACATAAATATACATGTATCTTTGCTATTCTTTTTAATGATTTAGTTTGTGTGTTGTTATTTGCTATTAATGCTTTGTTTCAATATAAACAACTTAATTACGCGATTATGACGTCAGTGCCTATCATATAAGTGTTTATGTATACATTATTTCTTTAACAAAATACAAAAATAAAGTGAAAATGTTTACTTATAAGGCATACAATATTTTTATAAGCTATATTAGGGGGGTTATGGAATTAAGTTGAAAACAGCTTATGGACACGTCATAAGTTGTTTCCATAAGCTCTTTCAAGCAGTCTCACAAATGTTTATGCCACTCGATAATTTCGAATAAGTCAATACAAACAGTCCCTTATTTTGGTTATTAATGGTTGCTTTTTATTGTTGCTGCTGTCAGCATATGAGGTATTGTCGGATAACGAGAAGAGAAATATTTATGATAAGTATGGTGAAGAGGGTTTGAAGCAGCATGCCGCTGGTGGAGGAAGAGGTGGTGGAATGAACATGCAGGATATTTTTAACTCGTAAGTCATCACCTTAGCCTTTGCTTGATTAGTTCTTAACCTATAAGTTAACACCATCACATTTCAGATATGTATTATCGGCTAATTACTTTATTTTTACTTGCATTGGTATAATGTATGTTGCAACAAAGAATCAAATAATATATGTTTATGGCTAAGAAAAGCAGTTATAGAAGGCTATTAGGGTTTTATATTATCACACTAACTGTAATCGGAACCTTCATATGGTTTTATTGATTCATTTGATTTCCTCATGTCTGCATCAATTTTTATGACGCCACAAATTTTAATATAGTCATTTATTTGCGATCAAAGATTATGTTGTCATGTGTAAGTGGACTGCTATGTTCTTGATGTGTATGGGGCTCTGGACTTGTATGCTAATTTTTAGTATGGGGTTCTGGACTTGCTTTTATGGATGACACCGAAATATGAATGTTTCTTTCAGTTTCTTTGGCGGGGGATCAATGGAGGAAGAAGAAGAGAAAATTGCGAAAGGCGACGACGTTATTGTTGATTTGGATGCAACCCTTGAAGATTTGTATATGGGTGGTTCCTTGAAGGTGCGGTCACATTTAATCTAGCTACTGTTTTGAGCTCAAGCATTAAATCTATGTATTTAATTATTTACCAATGGGTAACATATATGTGTCACATTGTCATGCTATTTTTAAATTTCTGCAACATTTTATTTTTATAATTTGAATAATATACTAGTAGATGGGTATGGGATAGATTCGCGACTATCATACTGGTTTTCACGTGACACGCGGCAACAGAAAAACACATTTTCATTAAGCTACATCAGCCAATAGAAAATCATAAATAAAACTAAAGCAACTAAAAATCATAAATAAAACTAAAGCAACTAAGAAGAACTGCTTTAGGGGATGAGATGCAGAACTTACATCAAGCTGACATCATGTATTCCCAGAGGCTATTCTTTATTTCCCTTTTGATAAATCTCAGATATTTTAGTTTGTACTTTGTGTTATACAGTTAAGTATTTTCATTGAGAAAATCAGGAGACACTGTAGCCACTATTCATGTATTATCATGGTGTAGTTGTAAACTAAGTGGTTATGAACTTGTCAAGAATTCTGAATCATCAATAACTCTGTCACGCTGTAGTGACCCAAAGTGTAGAATTCGCAAGTCATTTGTTGATTGCTTCTTTGTGATTATTGTATTGTAATTATCAGGTTTGGAGGGAGAAAAATGTTGTAAAGCCAGCTCCTGGAAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAGGCAAATCGGGCCTGGAATGTTTCAACAAATGACAGAGCAGGTAAATATCATCTTCGAGGATGCTGATAGTACAAATGTTCCTGTTTATTCTTGTCCATTTTTTAGGATGTATATTTTGCCCTGCAAATACACTGGCTTCTAGTGTCAATGTTTCATGACATTTCATTGTATGATTGTGGAAACCAGAAATGTTTAATTTATATATATTCATACTCAGTTTCTTTTTCCTTGTCTTTTTTCCTTATGTGCTTGAGGGGACTGGGGTGTGAAGGTTTATTTTTAATTTTGTTCCGAATATTTGCAAAAATTTATGCTACTATGTGTGATATCTACCTGTCCAGGTTTGTGATCAATGTGCTAATGTCAAATACGTAAGGGAGGGATATTTCGTCACTGTTGATATTGAGAAAGGCATGAAAGATGGCCAGGTAAACTTTTAAAGTTTGTATGTAGGTTTTAGTGCTTTATGTAAGTATGCATAATGTCATGTCTCACTATCCATTTTCTTATAAGCCCTACACTTATAAGCATGTCTAATCACATCGACATCTAAGCTCTAAAGACTGTAGCTCTGTTTGATAATTCTATTTGTAATTATGTTAGAACTGTAATTGATTTTAATTTCAATCTAGTCTGAGCAGCACACAATAATTTGTAAATTTTCTATTTTATTTCAATTCAATTTATGACAAGTTCTTGCATTTCATTACAACAAATACTCACTTGTACATTTAATTTAATTTTTGACATTGACAAGACAAAAAAAGCCCAACAATTATAATATTTATTTACCCTGATAGGGACTTGGCTATTACTGGATGCATTAGTTCACATAGTATAGTATGCGATGCTCTAATTAGCTTGGTCCTCCCCTTTGATAGCTAGCTTTTAAGGGAGCTTTCCCAACTCCCAAGTGCTTGAGTGCTTATGAAATGGTACCTGGGCAGGTTTCCAGTGTCTTAGAAAAACTATATATGGAAGAGACACCAGAAAGGCTGAGTCGAGCGTTGTAGAGTGCATCCATTGAGTCGTTTGGCACTTAAGAGAAGTGCTATGATAGGGACTTGCATATTAGGGCAACCCGGTGCATTGAAGCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCATTTGGTTTATTGTACGCAGCCTTACCCTCTTTTTACACAAGAGGCTGTTTCCAGGACTTGAACCCTGTTTCCAGGACTTGCATATTATGGAGTGTTTTTTTGTTTTGAATGGAGTATTATGGAGTGCTTAAATCACACATCAAGTAGTATGAGATGCTTGTTTTAGTCCTTAAGTGGCTTGGTTTTTCCCATGGCAGCTAGTTTTACGGGAGGGTTCCCACATGCTTGGGGTGCTGAATTGCCCAGATGACCATATGCATAGCTCAGTGGTTCTTACTACTTTAGGGTCTGTTTGGGGGTTTAGGATGGGAGGGGAGGACGTTAAGCGGAAGGAATGGAGGGTTTTAGGAGGAAGGGCTTTGGGGTGTTTATTTCTCTTCATAATACAAAATCCCCCTAATTTGGGGAAACTCAAAATCTATTAGAAGAGATTTTTGAAGGGCTTAGATAAATTCTTCAAATTCTTTTCATGTTGTTGTAATACTTTAAAAATTGAAAATTTATTAATCGTTAGTCTTTTCTTACATCTTACAATTACAACTCCAATCCCCCAAAGCCCTCCCCTTCCCTCCAAATTCCCAAATAGAGCCTTTAGCTTGAGCCAAAAAATTCATGTTATTTTGGCTCTCTGACTAAATAAGCTCATCTTATTCATATTGAATTTTGACCTTTTATTGATATTATTAAATTTTCTCAGCTGATCAGTGGATACATTTAATTGCCATTTTTTTTTTTGACCAAAACAAACTTAATTTATATCATTAATTAAACAATGTTCAATACAAGAAGGATAAACATAAAAAATACGGTGACTAGCCCAAGAACATGAGCAACCGTGTTCCCTTGTCGCCTAATAAACTTCACCTAAGATTTAGATTTAAATGACCTATCATTTGACATGATTCACAATCAAACATTGTGACATCGTTTGATGCTTGCAGCTAACTCTATCAAATGGGAAAGGCATTTATTCTCATTGTTGTAAGACTTGACGACCTAGCTTCAATTTTAAGGGTGTACCTGTTTAAGCTGAAAATTAGTTTATGCAAATATTAGATGGTGGGAAATAGATCCTTGTTTTTTTTTTAAAGGAAATAGATCCTTGTTTGACATCAGTTCCGACTACCAAGTAATATAGAGGAGTGAAAACCAAAAGCTTTGAATATGCCACACTGCTTTCTTTTTTACCCTTGATCCATTTTCCATCTTTCTCACCAACCATTCTCAAAGTGTTATTTTGCAATTGAATGTAAAGTACGAATCTTAATTTATGAAAGCTTTAATGTTTTCCAAGTCGAAACTTGACTAATTGAATGTTTATGGCAATTTTTTGTCCTTTCACAGGAGGTGCTATTTTATGAGGACGGCGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGGTTCGTAGATGCCTTTCATTTTTGTTAGCAAATGTTTAATATGCATGTTATTTATGTGCAGTTTGCTGACAATCCATATGCTAATATGAACAGTTTCGTATCCGCACCGCACCTCATGAACTTTTCAAAAGGGAAGGCAATGACTTACACACGACTGTCACTATCACGCTGGTAAGTATAATCATGGTATTATTTTAGTTGTACCTTACCTTTCGGATTTTGGATAACACTGCAAGTAGTAACTACTATTACTAACCACTGTTGTAGTAAGTATTAAACAGTAACTAGCATGGAAGAGTTGGAATATGACACTTGTTGATTGTGCAAACGGTTAACTGTTCTCTGATATATTTGCATCTTAAAAATTCTAAGCAGTGTAACCTTGATCTCCTTTAGGTTCAAGCTCTTGTTGGTTTTGAGAAGACCGTTAAACACCTTGATGAACATTTGGTAGACATAAGCTCGAAGGTGAGCATGAAATATCTTCTTTGCTGCTCTTAATTGGTGTTGATTCTCCCACCCCAAAAACATTGAAACACACCTAACATATTTCTTTTGTCCCTCAGGGAATCACAAATCCAAAGCAAGTAAGGAAGTTCAAAGGGGAGGGTATGCCATTGCATATGAGCACAAAGAAAGGAGATCTTTACGTCACTTTTGAGGTTCTGTTCCCCACCTCACTATCGGAGGAACAGAAAACAAAAATAAAATCAATTCTTGGTTAGAATACATTCAGGATACATGCTATTTTGCTCATTATGTCCTCAATGTAACATGATTAGGTGGTTGTAAGTTACAACAAATACACGCCTTAGGCTTCTCGCCCCCATTTTTTGTTAGTTAACCAATAGATACTTTATTTTTATTGTTGATAGTGTTGCATCTACTGTGATCCTTGTCGGCACATGAGTGCCTTATTGTGGTGCTATTTTGATACAAGGATATCACAGCATTAGCTGAAAGAAAAACATAA

Protein sequence

>MS.gene28798.t1

MAHQRAKLLFLLCALCYSLSAIAVKSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDNEKRNIYDKYGEEGLKQHAAGGGRGGGMNMQDIFNSFFGGGSMEEEEEKIAKGDDVIVDLDATLEDLYMGGSLKVWREKNVVKPAPGKRRCNCRNEVYHRQIGPGMFQQMTEQVCDQCANVKYVREGYFVTVDIEKGMKDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTVKHLDEHLVDISSKGITNPKQVRKFKGEGMPLHMSTKKGDLYVTFEDITALAERKT