AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052045

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052045.t1 MTR_2g098240 95.026 382 17 2 1 380 1 382 0.0 715
MS.gene052045.t1 MTR_4g065080 63.980 397 97 9 6 357 4 399 1.41e-173 490
MS.gene052045.t1 MTR_8g011780 45.070 355 160 6 9 333 12 361 1.96e-98 299
MS.gene052045.t1 MTR_7g053200 41.690 355 174 6 10 336 6 355 4.10e-89 275
MS.gene052045.t1 MTR_3g010260 38.144 388 194 9 11 355 411 795 3.63e-77 254
MS.gene052045.t1 MTR_4g113790 39.037 374 174 7 12 334 88 458 1.63e-76 244
MS.gene052045.t1 MTR_2g027240 39.011 364 177 8 12 333 201 561 2.07e-76 247
MS.gene052045.t1 MTR_1g060790 39.944 358 176 7 12 333 467 821 3.50e-76 252
MS.gene052045.t1 MTR_8g446990 39.286 364 178 8 8 333 125 483 1.05e-75 244
MS.gene052045.t1 MTR_2g062850 39.200 375 181 9 1 337 159 524 2.99e-75 243
MS.gene052045.t1 MTR_8g070530 40.854 328 171 5 10 331 592 902 1.03e-74 249
MS.gene052045.t1 MTR_6g004720 38.333 360 178 8 12 333 248 601 3.91e-74 242
MS.gene052045.t1 MTR_2g095980 43.252 326 171 6 10 330 366 682 1.53e-73 242
MS.gene052045.t1 MTR_2g085065 39.169 337 168 7 23 323 97 432 3.81e-73 235
MS.gene052045.t1 MTR_7g081665 38.770 374 179 9 11 343 360 724 5.22e-72 239
MS.gene052045.t1 MTR_2g095980 43.252 326 171 6 10 330 621 937 5.51e-72 242
MS.gene052045.t1 MTR_2g095980 43.252 326 171 6 10 330 621 937 7.23e-72 242
MS.gene052045.t1 MTR_8g006870 39.481 347 174 6 12 323 367 712 8.76e-72 239
MS.gene052045.t1 MTR_7g033640 36.538 364 186 7 12 333 229 589 2.08e-71 234
MS.gene052045.t1 MTR_7g104180 37.302 378 191 8 12 353 489 856 2.91e-71 239
MS.gene052045.t1 MTR_4g061610 41.692 331 159 8 8 330 637 941 9.32e-70 236
MS.gene052045.t1 MTR_2g069990 40.841 333 177 6 12 330 91 417 1.76e-69 226
MS.gene052045.t1 MTR_2g018990 38.310 355 183 10 12 333 74 425 7.54e-69 224
MS.gene052045.t1 MTR_8g089420 36.975 357 187 11 12 333 70 423 1.86e-68 223
MS.gene052045.t1 MTR_4g107280 31.507 365 181 10 20 369 92 402 3.47e-49 171
MS.gene052045.t1 MTR_7g073520 30.874 366 188 9 12 368 143 452 9.04e-47 166
MS.gene052045.t1 MTR_6g470940 30.982 397 215 13 3 378 863 1221 2.14e-46 170
MS.gene052045.t1 MTR_5g069000 31.268 339 209 9 3 334 748 1069 5.32e-44 163
MS.gene052045.t1 MTR_4g035835 31.268 339 209 9 3 334 744 1065 1.11e-43 162
MS.gene052045.t1 MTR_4g107280 29.692 357 159 10 20 369 92 363 7.46e-40 145
MS.gene052045.t1 MTR_2g040150 31.267 371 211 16 20 368 116 464 1.02e-37 142
MS.gene052045.t1 MTR_1g042700 28.857 350 201 9 12 337 110 435 1.83e-36 139
MS.gene052045.t1 MTR_1g019340 30.194 361 217 14 12 354 103 446 4.66e-36 137
MS.gene052045.t1 MTR_1g019340 30.699 329 202 11 12 326 103 419 5.99e-36 137
MS.gene052045.t1 MTR_3g104700 30.303 363 210 14 12 349 89 433 1.37e-35 136
MS.gene052045.t1 MTR_1g069735 28.108 370 238 11 12 368 115 469 7.41e-35 134
MS.gene052045.t1 MTR_1g069735 28.065 367 236 11 12 365 115 466 1.15e-34 133
MS.gene052045.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 1.93e-34 134
MS.gene052045.t1 MTR_3g104700 29.630 378 210 15 12 349 89 450 3.47e-34 132
MS.gene052045.t1 MTR_1g075880 27.451 357 223 11 12 349 112 451 5.30e-33 129
MS.gene052045.t1 MTR_1g442790 30.028 353 218 14 15 351 108 447 4.09e-32 127
MS.gene052045.t1 MTR_1g442790 29.830 352 220 13 15 351 108 447 4.13e-32 127
MS.gene052045.t1 MTR_7g097150 27.901 362 217 12 12 352 115 453 5.95e-32 126
MS.gene052045.t1 MTR_3g110405 29.452 292 153 7 14 300 34 277 3.74e-30 117
MS.gene052045.t1 MTR_1g090917 28.659 328 186 8 8 329 47 332 1.16e-28 117
MS.gene052045.t1 MTR_1g090917 28.659 328 186 8 8 329 47 332 1.20e-28 117
MS.gene052045.t1 MTR_8g035890 27.333 300 157 7 10 300 9 256 2.65e-28 112
MS.gene052045.t1 MTR_3g095620 28.197 305 159 9 23 317 31 285 2.80e-27 109
MS.gene052045.t1 MTR_8g040300 26.756 299 162 6 10 301 3 251 4.09e-27 108
MS.gene052045.t1 MTR_1g080020 28.767 292 141 8 23 300 15 253 6.56e-26 105
MS.gene052045.t1 MTR_2g020380 27.217 327 182 10 14 337 1 274 8.86e-26 110
MS.gene052045.t1 MTR_6g087000 31.330 233 110 6 113 340 855 1042 1.80e-25 108
MS.gene052045.t1 MTR_1g090917 30.992 242 127 5 92 329 2 207 2.72e-25 105
MS.gene052045.t1 MTR_1g090917 30.992 242 127 5 92 329 2 207 3.45e-25 105
MS.gene052045.t1 MTR_7g116390 27.632 304 158 8 10 300 9 263 7.99e-25 103
MS.gene052045.t1 MTR_5g045190 25.000 320 186 7 20 335 242 511 7.10e-24 103
MS.gene052045.t1 MTR_3g099920 26.708 322 180 8 1 316 1 272 3.07e-23 101
MS.gene052045.t1 MTR_2g016340 25.143 350 193 12 21 364 16 302 1.01e-22 99.4
MS.gene052045.t1 MTR_1g076370 27.157 313 172 10 1 304 5 270 8.08e-22 96.7
MS.gene052045.t1 MTR_8g024100 25.743 303 165 10 23 312 21 276 2.40e-21 96.3
MS.gene052045.t1 MTR_7g113490 25.079 315 165 9 21 317 72 333 3.48e-21 95.9
MS.gene052045.t1 MTR_3g466400 25.667 300 171 9 21 316 18 269 7.46e-21 94.0
MS.gene052045.t1 MTR_4g006970 24.282 383 225 13 1 374 1 327 1.53e-20 93.2
MS.gene052045.t1 MTR_6g012980 26.198 313 171 10 11 316 67 326 5.01e-20 91.7
MS.gene052045.t1 MTR_4g132070 26.266 316 153 12 21 316 95 350 1.79e-19 90.5
MS.gene052045.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.91e-19 90.5
MS.gene052045.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.97e-19 90.5
MS.gene052045.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.97e-19 90.5
MS.gene052045.t1 MTR_3g099767 25.161 310 167 10 23 323 118 371 4.94e-19 89.0
MS.gene052045.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 5.52e-19 88.6
MS.gene052045.t1 MTR_8g086380 26.159 302 168 10 21 316 30 282 5.87e-19 88.6
MS.gene052045.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 9.90e-19 88.2
MS.gene052045.t1 MTR_2g100030 25.676 296 174 8 41 319 42 308 1.70e-18 87.4
MS.gene052045.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 2.02e-18 87.4
MS.gene052045.t1 MTR_7g106710 27.184 309 155 11 23 316 141 394 2.65e-18 87.0
MS.gene052045.t1 MTR_4g029020 24.207 347 189 13 21 351 16 304 3.39e-18 86.3
MS.gene052045.t1 MTR_3g466480 25.321 312 164 10 21 313 25 286 4.82e-18 85.5
MS.gene052045.t1 MTR_7g072575 24.506 253 144 6 21 270 16 224 6.57e-18 85.5
MS.gene052045.t1 MTR_1g013700 23.592 284 169 7 21 300 17 256 1.15e-17 84.3
MS.gene052045.t1 MTR_5g075060 23.102 303 175 10 21 316 16 267 1.15e-17 84.7
MS.gene052045.t1 MTR_1g100250 25.141 354 181 13 4 337 395 684 1.26e-17 85.1
MS.gene052045.t1 MTR_5g075100 26.897 290 153 11 21 300 27 267 1.30e-17 84.3
MS.gene052045.t1 MTR_1g048630 22.408 299 180 6 20 316 10 258 2.65e-17 84.3
MS.gene052045.t1 MTR_3g088715 38.532 109 56 3 213 316 24 126 7.27e-17 77.0
MS.gene052045.t1 MTR_8g093730 24.147 381 194 13 13 378 295 595 8.08e-17 82.4
MS.gene052045.t1 MTR_4g128820 24.437 311 175 11 13 316 6 263 1.06e-16 81.6
MS.gene052045.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 1.60e-16 80.5
MS.gene052045.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.25e-16 80.5
MS.gene052045.t1 MTR_1g040875 28.745 247 126 9 21 262 28 229 2.26e-16 80.5
MS.gene052045.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.39e-16 80.5
MS.gene052045.t1 MTR_1g081000 22.727 242 143 2 20 260 7 205 6.29e-16 79.7
MS.gene052045.t1 MTR_1g081000 22.727 242 143 2 20 260 7 205 6.99e-16 79.7
MS.gene052045.t1 MTR_4g051648 21.136 317 195 5 20 333 11 275 7.53e-16 79.7
MS.gene052045.t1 MTR_3g096230 24.691 243 132 5 21 258 248 444 1.29e-15 78.6
MS.gene052045.t1 MTR_3g096230 24.691 243 132 5 21 258 248 444 2.34e-15 78.2
MS.gene052045.t1 MTR_1g103760 24.138 261 149 8 21 277 16 231 7.81e-15 75.9
MS.gene052045.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.43e-14 75.5
MS.gene052045.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.56e-14 75.5
MS.gene052045.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.62e-14 75.5
MS.gene052045.t1 MTR_4g075410 25.424 236 134 1 23 258 26 219 1.71e-14 75.9
MS.gene052045.t1 MTR_4g075410 25.424 236 134 1 23 258 26 219 1.73e-14 75.9
MS.gene052045.t1 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.60e-14 74.3
MS.gene052045.t1 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.62e-14 74.3
MS.gene052045.t1 MTR_1g052115 21.379 290 180 6 14 299 1 246 8.16e-14 73.6
MS.gene052045.t1 MTR_3g076970 25.194 258 149 8 23 275 32 250 1.86e-13 71.2
MS.gene052045.t1 MTR_7g011800 23.398 359 193 11 12 336 115 425 5.22e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052045.t1 AT1G51170 56.853 394 145 7 7 377 13 404 6.08e-149 427
MS.gene052045.t1 AT3G20830 56.423 397 141 6 12 380 16 408 1.11e-146 421
MS.gene052045.t1 AT3G25250 48.127 347 154 5 12 338 12 352 2.90e-103 311
MS.gene052045.t1 AT4G13000 46.588 337 162 5 12 337 15 344 3.54e-99 299
MS.gene052045.t1 AT1G79250 38.482 382 187 8 12 347 141 520 5.02e-79 253
MS.gene052045.t1 AT1G79250 38.482 382 187 8 12 347 141 520 5.02e-79 253
MS.gene052045.t1 AT1G79250 38.482 382 187 8 12 347 141 520 5.02e-79 253
MS.gene052045.t1 AT1G79250 38.482 382 187 8 12 347 141 520 5.02e-79 253
MS.gene052045.t1 AT5G55910 39.891 366 178 7 12 337 104 467 9.27e-78 248
MS.gene052045.t1 AT5G55910 39.891 366 178 7 12 337 104 467 9.27e-78 248
MS.gene052045.t1 AT5G47750 40.331 362 173 9 12 333 186 544 2.21e-77 249
MS.gene052045.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.99e-77 255
MS.gene052045.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.99e-77 255
MS.gene052045.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.99e-77 255
MS.gene052045.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.99e-77 255
MS.gene052045.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.99e-77 255
MS.gene052045.t1 AT3G12690 40.341 352 175 8 12 333 180 526 5.09e-77 248
MS.gene052045.t1 AT3G12690 40.341 352 175 8 12 333 180 526 5.09e-77 248
MS.gene052045.t1 AT3G12690 40.341 352 175 8 12 333 180 526 5.09e-77 248
MS.gene052045.t1 AT2G36350 40.110 364 174 7 12 333 554 915 9.58e-77 255
MS.gene052045.t1 AT5G58140 41.945 329 158 7 8 325 568 874 3.76e-76 253
MS.gene052045.t1 AT5G40030 40.443 361 181 9 9 337 106 464 5.44e-76 243
MS.gene052045.t1 AT4G26610 39.617 366 175 8 12 337 118 477 4.37e-75 241
MS.gene052045.t1 AT1G16440 37.340 391 203 9 12 374 108 484 7.67e-75 241
MS.gene052045.t1 AT2G44830 40.669 359 174 8 12 333 358 714 1.16e-74 246
MS.gene052045.t1 AT2G44830 40.669 359 174 8 12 333 358 714 1.16e-74 246
MS.gene052045.t1 AT2G44830 40.669 359 174 8 12 333 358 714 1.16e-74 246
MS.gene052045.t1 AT2G34650 38.793 348 187 8 10 334 68 412 5.79e-74 236
MS.gene052045.t1 AT3G45780 42.988 328 167 5 8 330 654 966 1.58e-73 247
MS.gene052045.t1 AT3G45780 42.988 328 167 5 8 330 654 966 1.58e-73 247
MS.gene052045.t1 AT3G44610 38.793 348 165 7 23 323 75 421 5.90e-73 234
MS.gene052045.t1 AT3G52890 39.211 380 178 10 12 347 533 903 4.00e-72 242
MS.gene052045.t1 AT3G52890 39.211 380 178 10 12 347 533 903 4.00e-72 242
MS.gene052045.t1 AT3G52890 39.211 380 178 10 12 347 533 903 4.00e-72 242
MS.gene052045.t1 AT3G52890 39.211 380 178 10 12 347 533 903 4.00e-72 242
MS.gene052045.t1 AT5G03640 39.118 363 177 8 12 333 536 895 4.99e-71 239
MS.gene052045.t1 AT5G03640 39.118 363 177 8 12 333 536 895 4.99e-71 239
MS.gene052045.t1 AT3G27580 37.500 360 184 7 12 333 177 533 1.45e-70 231
MS.gene052045.t1 AT3G27580 37.500 360 184 7 12 333 177 533 1.45e-70 231
MS.gene052045.t1 AT1G53700 40.469 341 189 7 3 332 79 416 1.10e-68 224
MS.gene052045.t1 AT3G14370 37.971 345 179 8 8 330 79 410 3.45e-65 215
MS.gene052045.t1 AT3G08720 32.095 377 188 11 2 369 123 440 1.47e-49 174
MS.gene052045.t1 AT3G08720 32.095 377 188 11 2 369 123 440 1.47e-49 174
MS.gene052045.t1 AT3G08720 32.095 377 188 11 2 369 123 440 1.47e-49 174
MS.gene052045.t1 AT3G08720 32.095 377 188 11 2 369 123 440 1.47e-49 174
MS.gene052045.t1 AT3G08730 32.523 329 166 9 12 333 129 408 2.45e-49 173
MS.gene052045.t1 AT3G08730 32.523 329 166 9 12 333 129 408 2.45e-49 173
MS.gene052045.t1 AT3G17850 30.252 357 204 11 3 342 869 1197 5.45e-44 163
MS.gene052045.t1 AT1G45160 33.735 332 186 10 12 333 665 972 5.78e-44 163
MS.gene052045.t1 AT1G45160 33.735 332 186 10 12 333 665 972 6.02e-44 163
MS.gene052045.t1 AT1G48490 29.674 337 209 7 12 342 824 1138 2.25e-43 161
MS.gene052045.t1 AT1G48490 29.674 337 209 7 12 342 823 1137 2.34e-43 161
MS.gene052045.t1 AT1G48490 29.674 337 209 7 12 342 823 1137 2.34e-43 161
MS.gene052045.t1 AT1G48490 29.674 337 209 7 12 342 823 1137 2.34e-43 161
MS.gene052045.t1 AT5G62310 28.362 409 232 12 3 380 739 1117 1.03e-42 159
MS.gene052045.t1 AT3G10540 30.721 319 178 7 21 333 49 330 1.57e-41 152
MS.gene052045.t1 AT2G19400 31.398 379 218 15 12 368 100 458 5.13e-41 152
MS.gene052045.t1 AT5G04510 30.094 319 180 7 21 333 48 329 3.36e-39 144
MS.gene052045.t1 AT5G04510 30.094 319 180 7 21 333 48 329 8.22e-39 145
MS.gene052045.t1 AT1G30640 30.409 342 208 11 10 334 20 348 4.93e-38 142
MS.gene052045.t1 AT1G30640 30.409 342 208 11 10 334 113 441 2.07e-37 142
MS.gene052045.t1 AT1G30640 30.409 342 208 11 10 334 113 441 2.07e-37 142
MS.gene052045.t1 AT2G26700 46.203 158 82 2 12 166 82 239 5.69e-37 140
MS.gene052045.t1 AT2G26700 45.652 138 64 2 214 341 354 490 3.45e-31 124
MS.gene052045.t1 AT4G33080 28.869 336 207 8 12 326 89 413 3.77e-36 138
MS.gene052045.t1 AT4G33080 28.869 336 207 8 12 326 89 413 4.04e-36 138
MS.gene052045.t1 AT5G09890 28.977 352 216 12 12 345 97 432 3.11e-35 135
MS.gene052045.t1 AT5G09890 28.977 352 216 12 12 345 97 432 4.07e-35 135
MS.gene052045.t1 AT3G23310 28.267 375 228 13 12 367 115 467 8.49e-35 135
MS.gene052045.t1 AT4G14350 29.070 344 208 11 12 337 114 439 5.51e-33 129
MS.gene052045.t1 AT4G14350 29.070 344 208 11 12 337 114 439 5.88e-33 129
MS.gene052045.t1 AT4G14350 29.070 344 208 11 12 337 114 439 5.88e-33 129
MS.gene052045.t1 AT4G14350 29.070 344 208 11 12 337 114 439 5.88e-33 129
MS.gene052045.t1 AT5G04510 30.686 277 150 8 21 292 48 287 1.19e-31 122
MS.gene052045.t1 AT1G03920 27.901 362 217 13 12 352 19 357 1.94e-31 124
MS.gene052045.t1 AT2G45490 29.329 283 147 5 23 300 28 262 4.09e-31 120
MS.gene052045.t1 AT1G03920 27.901 362 217 13 12 352 132 470 7.62e-31 124
MS.gene052045.t1 AT1G03920 27.901 362 217 13 12 352 132 470 7.62e-31 124
MS.gene052045.t1 AT2G20470 26.471 374 232 12 12 365 119 469 4.78e-29 119
MS.gene052045.t1 AT2G20470 26.471 374 232 12 12 365 119 469 4.78e-29 119
MS.gene052045.t1 AT2G20470 26.471 374 232 12 12 365 119 469 5.07e-29 118
MS.gene052045.t1 AT2G45490 26.978 278 153 4 2 277 7 236 2.47e-28 111
MS.gene052045.t1 AT2G25880 27.972 286 153 7 21 301 29 266 1.75e-27 110
MS.gene052045.t1 AT2G25880 27.972 286 153 7 21 301 42 279 2.34e-27 110
MS.gene052045.t1 AT4G32830 28.421 285 151 7 21 300 35 271 2.58e-27 110
MS.gene052045.t1 AT5G18700 27.829 327 176 9 14 337 1 270 2.64e-27 114
MS.gene052045.t1 AT2G25880 27.972 286 153 7 21 301 90 327 9.95e-27 109
MS.gene052045.t1 AT2G20050 29.796 245 123 4 116 355 877 1077 1.18e-26 112
MS.gene052045.t1 AT2G20050 29.796 245 123 4 116 355 880 1080 1.21e-26 112
MS.gene052045.t1 AT4G18700 27.619 315 172 10 8 316 17 281 2.97e-24 104
MS.gene052045.t1 AT4G04720 26.498 317 153 12 21 317 84 340 1.41e-22 99.8
MS.gene052045.t1 AT4G04720 26.498 317 153 12 21 317 84 340 1.41e-22 99.8
MS.gene052045.t1 AT4G29810 26.994 326 176 9 3 316 56 331 5.53e-22 96.3
MS.gene052045.t1 AT4G29810 25.197 381 198 10 3 371 65 370 7.15e-22 96.3
MS.gene052045.t1 AT3G06030 26.332 319 163 9 21 321 72 336 7.93e-22 97.8
MS.gene052045.t1 AT1G29230 27.362 307 164 12 3 300 61 317 3.82e-21 95.5
MS.gene052045.t1 AT1G69220 24.342 304 178 6 20 319 252 507 9.55e-21 94.7
MS.gene052045.t1 AT4G29810 26.861 309 168 8 3 299 65 327 2.01e-20 91.7
MS.gene052045.t1 AT2G25090 27.362 307 166 11 21 316 19 279 2.82e-20 92.4
MS.gene052045.t1 AT5G25110 24.296 284 167 7 21 300 47 286 6.04e-20 91.7
MS.gene052045.t1 AT1G69220 23.750 320 192 6 4 319 209 480 6.33e-20 92.0
MS.gene052045.t1 AT4G26070 26.154 325 178 8 4 316 42 316 7.31e-20 90.1
MS.gene052045.t1 AT4G26070 26.154 325 178 8 4 316 55 329 8.76e-20 90.1
MS.gene052045.t1 AT4G26070 26.154 325 178 8 4 316 55 329 8.76e-20 90.1
MS.gene052045.t1 AT4G26070 26.154 325 178 8 4 316 54 328 9.45e-20 89.7
MS.gene052045.t1 AT1G54960 25.896 251 136 5 21 264 72 279 1.05e-19 91.3
MS.gene052045.t1 AT1G54960 25.896 251 136 5 21 264 72 279 1.05e-19 91.3
MS.gene052045.t1 AT2G34180 26.235 324 179 13 2 316 40 312 1.69e-19 90.5
MS.gene052045.t1 AT1G12680 24.497 298 159 10 23 312 113 352 1.93e-19 90.1
MS.gene052045.t1 AT1G09000 25.498 251 137 5 21 264 73 280 2.31e-19 90.5
MS.gene052045.t1 AT2G26980 25.836 329 175 13 21 340 18 286 2.50e-19 89.0
MS.gene052045.t1 AT1G09000 25.100 251 138 4 21 264 73 280 2.71e-19 90.1
MS.gene052045.t1 AT2G26980 26.074 326 172 13 21 337 18 283 3.22e-19 89.0
MS.gene052045.t1 AT4G21940 25.559 313 161 11 21 317 106 362 3.28e-19 89.4
MS.gene052045.t1 AT4G21940 25.559 313 161 11 21 317 106 362 3.82e-19 89.4
MS.gene052045.t1 AT4G21940 25.559 313 161 11 21 317 106 362 4.02e-19 89.4
MS.gene052045.t1 AT2G26980 25.836 329 175 13 21 340 18 286 4.09e-19 89.0
MS.gene052045.t1 AT2G26980 25.836 329 175 13 21 340 28 296 4.42e-19 89.0
MS.gene052045.t1 AT5G45810 25.253 297 170 9 10 300 21 271 4.73e-19 89.0
MS.gene052045.t1 AT3G15220 27.500 240 128 6 20 258 18 212 6.54e-19 89.0
MS.gene052045.t1 AT3G50530 26.846 298 177 11 23 300 154 430 6.74e-19 89.0
MS.gene052045.t1 AT1G50240 22.623 305 184 6 20 322 9 263 1.47e-18 88.2
MS.gene052045.t1 AT1G50240 22.623 305 184 6 20 322 9 263 1.47e-18 88.2
MS.gene052045.t1 AT5G10930 23.509 285 169 7 21 300 16 256 1.57e-18 87.0
MS.gene052045.t1 AT4G26070 26.766 269 149 5 4 270 55 277 1.69e-18 85.5
MS.gene052045.t1 AT5G45820 25.172 290 157 9 21 300 16 255 1.72e-18 87.0
MS.gene052045.t1 AT1G08650 26.557 305 167 8 8 300 3 262 3.60e-18 84.3
MS.gene052045.t1 AT2G30360 26.667 285 161 10 21 300 25 266 3.82e-18 85.9
MS.gene052045.t1 AT1G08650 26.557 305 167 8 8 300 3 262 5.30e-18 83.6
MS.gene052045.t1 AT3G04530 25.424 295 166 6 15 300 9 258 7.66e-18 83.2
MS.gene052045.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.88e-18 85.5
MS.gene052045.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.88e-18 85.5
MS.gene052045.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.88e-18 85.5
MS.gene052045.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.88e-18 85.5
MS.gene052045.t1 AT5G01810 25.000 284 165 9 21 300 16 255 1.07e-17 84.3
MS.gene052045.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.44e-17 84.7
MS.gene052045.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.44e-17 84.7
MS.gene052045.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.44e-17 84.7
MS.gene052045.t1 AT5G01810 24.648 284 166 8 21 300 16 255 1.53e-17 84.0
MS.gene052045.t1 AT5G01810 24.648 284 166 8 21 300 16 255 1.53e-17 84.0
MS.gene052045.t1 AT3G63280 22.635 296 179 5 20 312 61 309 1.87e-17 84.3
MS.gene052045.t1 AT2G26980 26.224 286 154 11 21 297 18 255 2.91e-17 81.3
MS.gene052045.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.40e-17 83.6
MS.gene052045.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.43e-17 83.6
MS.gene052045.t1 AT1G53165 27.083 240 129 6 20 258 18 212 5.06e-17 83.2
MS.gene052045.t1 AT2G17890 26.280 293 156 10 21 300 112 357 5.10e-17 83.2
MS.gene052045.t1 AT4G14580 25.321 312 175 10 1 300 1 266 7.43e-17 82.0
MS.gene052045.t1 AT4G24400 24.590 305 165 11 21 315 13 262 8.59e-17 82.0
MS.gene052045.t1 AT3G44200 22.667 300 182 5 20 316 11 263 9.96e-17 82.4
MS.gene052045.t1 AT3G44200 22.667 300 182 5 20 316 11 263 9.96e-17 82.4
MS.gene052045.t1 AT4G24400 24.194 310 160 11 21 315 13 262 1.01e-16 81.6
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.03e-16 82.0
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.11e-16 82.0
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.11e-16 82.0
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.11e-16 82.0
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.11e-16 82.0
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.11e-16 82.0
MS.gene052045.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.11e-16 82.0
MS.gene052045.t1 AT2G38490 25.410 244 137 6 21 262 32 232 1.27e-16 81.3
MS.gene052045.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.62e-16 81.6
MS.gene052045.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.72e-16 81.6
MS.gene052045.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.72e-16 81.6
MS.gene052045.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.89e-16 81.3
MS.gene052045.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.89e-16 81.3
MS.gene052045.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.89e-16 81.3
MS.gene052045.t1 AT1G63700 26.032 315 157 11 21 318 404 659 2.81e-16 81.3
MS.gene052045.t1 AT1G63700 26.032 315 157 11 21 318 404 659 2.81e-16 81.3
MS.gene052045.t1 AT1G53570 25.130 386 204 14 5 370 206 526 3.39e-16 80.5
MS.gene052045.t1 AT1G53570 25.130 386 204 14 5 370 206 526 3.39e-16 80.5
MS.gene052045.t1 AT1G53570 25.065 387 204 14 5 370 206 527 3.78e-16 80.5
MS.gene052045.t1 AT1G18350 22.101 276 160 7 3 271 30 257 4.71e-16 78.6
MS.gene052045.t1 AT1G53570 24.804 383 203 14 5 367 206 523 2.24e-15 77.8
MS.gene052045.t1 AT3G20860 20.430 279 177 2 23 299 10 245 2.98e-15 77.0
MS.gene052045.t1 AT1G53570 24.740 384 203 14 5 367 206 524 3.08e-15 77.4
MS.gene052045.t1 AT1G53570 24.740 384 203 14 5 367 206 524 3.14e-15 77.8
MS.gene052045.t1 AT3G23000 24.561 285 162 10 23 300 31 269 3.26e-15 77.0
MS.gene052045.t1 AT5G07070 23.320 253 147 7 21 270 16 224 7.33e-15 76.3
MS.gene052045.t1 AT1G73500 22.741 321 183 8 9 316 39 307 1.85e-14 73.9
MS.gene052045.t1 AT4G30960 24.686 239 135 5 64 300 72 267 1.87e-14 74.7
MS.gene052045.t1 AT3G13530 25.424 236 134 1 23 258 26 219 2.90e-14 75.1
MS.gene052045.t1 AT3G07980 25.000 236 135 1 23 258 26 219 3.92e-14 74.7
MS.gene052045.t1 AT3G07980 25.000 236 135 1 23 258 26 219 4.08e-14 74.7
MS.gene052045.t1 AT1G32320 25.309 324 171 12 7 316 37 303 1.55e-13 71.2
MS.gene052045.t1 AT2G25880 33.333 99 63 1 206 301 136 234 1.51e-12 67.4
MS.gene052045.t1 AT1G51660 24.066 241 129 4 23 258 85 276 2.26e-12 68.2
MS.gene052045.t1 AT5G50180 23.944 284 170 9 23 299 26 270 1.08e-11 65.9
MS.gene052045.t1 AT5G58140 30.435 115 77 2 8 120 568 681 6.58e-11 64.3

Find 95 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAAACGGCTAAGTTAAT+TGG 0.190646 2.2:-4480978 MS.gene052045:CDS
GTATGGGAAAACACCGTTTA+AGG 0.214990 2.2:-4480469 MS.gene052045:CDS
CCGTCGCCGCGGATTACTTC+CGG 0.327605 2.2:+4480546 None:intergenic
GTTTGAGGTTGTTGAGGTTA+AGG 0.334202 2.2:+4481192 None:intergenic
CTCCCAACGGGCTCGACGTT+CGG 0.347912 2.2:+4481055 None:intergenic
AACGTTCTTATTCAACAATC+TGG 0.349756 2.2:-4480789 MS.gene052045:CDS
CGTCGCCGCGGATTACTTCC+GGG 0.352639 2.2:+4480547 None:intergenic
TTCAAGAAGCTTGAATTTGT+TGG 0.364298 2.2:-4480411 MS.gene052045:CDS
TGGAGGAGCTAATGAAATTA+AGG 0.369595 2.2:-4480316 MS.gene052045:CDS
AGGTTAAGGTCTTGTGTACT+AGG 0.388335 2.2:+4481206 None:intergenic
TTCTTATTCTTCCCCTTAAA+CGG 0.388670 2.2:+4480456 None:intergenic
TATTTGACGGCGGAGGAATT+CGG 0.390287 2.2:-4480210 MS.gene052045:CDS
TATGGGAAAACACCGTTTAA+GGG 0.398885 2.2:-4480468 MS.gene052045:CDS
CGCCGAACGTCGAGCCCGTT+GGG 0.404219 2.2:-4481057 MS.gene052045:CDS
TCCATTTCTCCCATCCATCC+TGG 0.408154 2.2:-4481006 MS.gene052045:CDS
TGGAAGGAAAACAGCGTTAA+CGG 0.421220 2.2:-4480391 MS.gene052045:CDS
CTCAAACCACTCAAAATATT+AGG 0.425265 2.2:-4481176 MS.gene052045:CDS
AAGGATCCATTGAAGAGATT+AGG 0.425634 2.2:-4480345 MS.gene052045:CDS
AGATCACCTCCTGAGCAATA+TGG 0.427603 2.2:+4480945 None:intergenic
TTAAGCTACGAGATGTTGTA+TGG 0.433577 2.2:-4480486 MS.gene052045:CDS
TCATCTCTCGACGGAATAAA+CGG 0.437394 2.2:+4480237 None:intergenic
GTCACCGTCGTCTGAGTTTG+AGG 0.438899 2.2:-4480130 MS.gene052045:CDS
CCCAGGATGGATGGGAGAAA+TGG 0.456473 2.2:+4481005 None:intergenic
GAAAAGTCTAACTCGTTTGT+TGG 0.462299 2.2:-4480588 MS.gene052045:CDS
ACGTAAACTTTCACACAAAA+CGG 0.466415 2.2:-4480736 MS.gene052045:CDS
AAACGGCTAAGTTAATTGGC+TGG 0.472440 2.2:-4480974 MS.gene052045:CDS
TCAAAGTTGCCCAGGATGGA+TGG 0.472882 2.2:+4480996 None:intergenic
AATTGCCGTCGTCGCCGTTA+CGG 0.473130 2.2:-4480152 MS.gene052045:CDS
AGAAGACACGGTCCGTTTGT+TGG 0.477023 2.2:+4480907 None:intergenic
CTCAATCCACGACGACTCAC+CGG 0.481389 2.2:+4480624 None:intergenic
ATATTAGGCAAAGGAGCAAT+GGG 0.488514 2.2:-4481161 MS.gene052045:CDS
ACGTAACCTAATCTCTTCAA+TGG 0.502638 2.2:+4480339 None:intergenic
CGCGCTCCGTTACCAACAAA+CGG 0.503897 2.2:-4480919 MS.gene052045:CDS
GGTAAAATGGGAAATGTTGA+CGG 0.504814 2.2:-4480274 MS.gene052045:CDS
AATATTAGGCAAAGGAGCAA+TGG 0.515425 2.2:-4481162 MS.gene052045:CDS
GAATCTCTGCTATGTAGAAA+CGG 0.516064 2.2:+4480871 None:intergenic
AACGGCTAAGTTAATTGGCT+GGG 0.518921 2.2:-4480973 MS.gene052045:CDS
CAAAGTTGCCCAGGATGGAT+GGG 0.520980 2.2:+4480997 None:intergenic
AAATGTTGACGGAGGTTGTA+CGG 0.525214 2.2:-4480263 MS.gene052045:CDS
AAGAGATTAGGTTACGTTGG+AGG 0.527362 2.2:-4480333 MS.gene052045:CDS
TAAGACGTCGATCTCCCAAC+GGG 0.538002 2.2:+4481043 None:intergenic
GAGAAATGGATGTGATAAAG+TGG 0.543650 2.2:+4481019 None:intergenic
CACAGCAGAGTACGTCGCCC+CGG 0.544316 2.2:-4480565 MS.gene052045:CDS
GATCGAACGGTTGTTAGAGA+AGG 0.544362 2.2:-4480364 MS.gene052045:CDS
CATCCTGGGCAACTTTGAAA+CGG 0.545285 2.2:-4480991 MS.gene052045:CDS
CACGGTCCGTTTGTTGGTAA+CGG 0.546711 2.2:+4480913 None:intergenic
GGACTAATTCGACGATTGAG+TGG 0.549952 2.2:+4480645 None:intergenic
CCATTTCTCCCATCCATCCT+GGG 0.550555 2.2:-4481005 MS.gene052045:CDS
TAGCCGTTTCAAAGTTGCCC+AGG 0.553102 2.2:+4480988 None:intergenic
TGGGCCGTTCCATATTGCTC+AGG 0.553646 2.2:-4480954 MS.gene052045:CDS
AGAAGCTTGAATTTGTTGGA+AGG 0.553916 2.2:-4480407 MS.gene052045:CDS
TTGAAGAGATTAGGTTACGT+TGG 0.554323 2.2:-4480336 MS.gene052045:CDS
GTCAACTACTTTGAGTGCCA+TGG 0.555726 2.2:+4481097 None:intergenic
ACGTTCGGCGTCGTGTGTGG+AGG 0.558783 2.2:+4481070 None:intergenic
GTGGATTCTGCTATCTTCGA+CGG 0.561764 2.2:+4480701 None:intergenic
GAGAGATGACGGTTATTTGA+CGG 0.561885 2.2:-4480223 MS.gene052045:CDS
TTTATTCCGTCGAGAGATGA+CGG 0.563993 2.2:-4480234 MS.gene052045:CDS
CGTTTCAAAGTTGCCCAGGA+TGG 0.565181 2.2:+4480992 None:intergenic
ACTCAATCGTCGAATTAGTC+CGG 0.566855 2.2:-4480643 MS.gene052045:CDS
TCGACGTTCGGCGTCGTGTG+TGG 0.568999 2.2:+4481067 None:intergenic
GGCGGAGGAATTCGGTGGAG+TGG 0.569972 2.2:-4480202 MS.gene052045:CDS
ATTAGTCCGGTGAGTCGTCG+TGG 0.574660 2.2:-4480630 MS.gene052045:CDS
ACGCCGAACGTCGAGCCCGT+TGG 0.575774 2.2:-4481058 MS.gene052045:CDS
TGAGTGGTTTGAGGTTGTTG+AGG 0.578898 2.2:+4481186 None:intergenic
TGACGGTTATTTGACGGCGG+AGG 0.580618 2.2:-4480217 MS.gene052045:CDS
TAAGCTACGAGATGTTGTAT+GGG 0.582681 2.2:-4480485 MS.gene052045:CDS
GGTGACCGTAACGGCGACGA+CGG 0.585676 2.2:+4480147 None:intergenic
CCGGAAGTAATCCGCGGCGA+CGG 0.589107 2.2:-4480546 MS.gene052045:CDS
GTCGCCGCGGATTACTTCCG+GGG 0.591913 2.2:+4480548 None:intergenic
CCACTCAAAATATTAGGCAA+AGG 0.592566 2.2:-4481170 MS.gene052045:CDS
ATGGGAAAACACCGTTTAAG+GGG 0.596069 2.2:-4480467 MS.gene052045:CDS
CTTGAACATCTTCATACCAT+GGG 0.597222 2.2:-4480840 MS.gene052045:CDS
TCTTGAACATCTTCATACCA+TGG 0.599326 2.2:-4480841 MS.gene052045:CDS
GCCGTTCCATATTGCTCAGG+AGG 0.603060 2.2:-4480951 MS.gene052045:CDS
TTGACGGCGGAGGAATTCGG+TGG 0.604647 2.2:-4480207 MS.gene052045:CDS
CGAAATCAGTTAACGTGACG+TGG 0.610579 2.2:+4480766 None:intergenic
ACCTCCTGAGCAATATGGAA+CGG 0.615838 2.2:+4480950 None:intergenic
ACGAATCTCAACGTAAAACT+CGG 0.616793 2.2:-4480680 MS.gene052045:CDS
TCTTGTGTACTAGGTGATGT+TGG 0.617524 2.2:+4481215 None:intergenic
CTCAACGTAAAACTCGGCGA+TGG 0.629173 2.2:-4480674 MS.gene052045:CDS
CGTTAACGGATTTGATCGAA+CGG 0.633392 2.2:-4480377 MS.gene052045:CDS
CGAATTCATGTCCGTCGCCG+CGG 0.635238 2.2:+4480535 None:intergenic
TCAGACGACGGTGACCGTAA+CGG 0.637892 2.2:+4480138 None:intergenic
TTGCTGTTGTTGAGAAGACA+CGG 0.638083 2.2:+4480895 None:intergenic
CTATCCTCAAACTCAGACGA+CGG 0.647272 2.2:+4480126 None:intergenic
ATAAGACGTCGATCTCCCAA+CGG 0.650869 2.2:+4481042 None:intergenic
GTCGCCCCGGAAGTAATCCG+CGG 0.664172 2.2:-4480552 MS.gene052045:CDS
CGTGGATTGAGTTTCTCCGA+CGG 0.669810 2.2:-4480612 MS.gene052045:CDS
AAATAACCGTCATCTCTCGA+CGG 0.670876 2.2:+4480228 None:intergenic
GTCACGATAAGCTATGCCCA+TGG 0.680568 2.2:+4480824 None:intergenic
AACTACTTTGAGTGCCATGG+TGG 0.680601 2.2:+4481100 None:intergenic
AAAATGGGAAATGTTGACGG+AGG 0.693491 2.2:-4480271 MS.gene052045:CDS
CAACAACGTTAACACCACCA+TGG 0.694696 2.2:-4481114 MS.gene052045:CDS
AGATGACGGTTATTTGACGG+CGG 0.716338 2.2:-4480220 MS.gene052045:CDS
TCTCTCGACGGAATAAACGG+TGG 0.757144 2.2:+4480240 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AACGTTCTTATTCAACAATC+TGG - chr2.2:4480539-4480558 MS.gene052045:CDS 30.0%
ACGTAAACTTTCACACAAAA+CGG - chr2.2:4480592-4480611 MS.gene052045:CDS 30.0%
CTCAAACCACTCAAAATATT+AGG - chr2.2:4480152-4480171 MS.gene052045:CDS 30.0%
TTCAAGAAGCTTGAATTTGT+TGG - chr2.2:4480917-4480936 MS.gene052045:CDS 30.0%
TTCTTATTCTTCCCCTTAAA+CGG + chr2.2:4480875-4480894 None:intergenic 30.0%
! TGTTGAATAAGAACGTTTTC+TGG + chr2.2:4480536-4480555 None:intergenic 30.0%
! TTTGAAACGGCTAAGTTAAT+TGG - chr2.2:4480350-4480369 MS.gene052045:CDS 30.0%
!! ATGAATTCGCAGTTGATTTT+TGG - chr2.2:4480807-4480826 MS.gene052045:CDS 30.0%
!! CTAATATTTTGAGTGGTTTG+AGG + chr2.2:4480154-4480173 None:intergenic 30.0%
!! TGAATTCGCAGTTGATTTTT+GGG - chr2.2:4480808-4480827 MS.gene052045:CDS 30.0%
!!! AGTTTTTTAGAGGGGTAAAA+TGG - chr2.2:4481041-4481060 MS.gene052045:CDS 30.0%
!!! GTTTTTTAGAGGGGTAAAAT+GGG - chr2.2:4481042-4481061 MS.gene052045:CDS 30.0%
!!! TAAGAACGTTTTCTGGTTTA+AGG + chr2.2:4480529-4480548 None:intergenic 30.0%
!!! TGTTAACGTTGTTGTTTTGT+TGG + chr2.2:4480208-4480227 None:intergenic 30.0%
AAGGATCCATTGAAGAGATT+AGG - chr2.2:4480983-4481002 MS.gene052045:CDS 35.0%
AATATTAGGCAAAGGAGCAA+TGG - chr2.2:4480166-4480185 MS.gene052045:CDS 35.0%
ACGAATCTCAACGTAAAACT+CGG - chr2.2:4480648-4480667 MS.gene052045:CDS 35.0%
ACGTAACCTAATCTCTTCAA+TGG + chr2.2:4480992-4481011 None:intergenic 35.0%
ATATTAGGCAAAGGAGCAAT+GGG - chr2.2:4480167-4480186 MS.gene052045:CDS 35.0%
CCACTCAAAATATTAGGCAA+AGG - chr2.2:4480158-4480177 MS.gene052045:CDS 35.0%
CTTGAACATCTTCATACCAT+GGG - chr2.2:4480488-4480507 MS.gene052045:CDS 35.0%
GAAAAGTCTAACTCGTTTGT+TGG - chr2.2:4480740-4480759 MS.gene052045:CDS 35.0%
GAATCTCTGCTATGTAGAAA+CGG + chr2.2:4480460-4480479 None:intergenic 35.0%
GAGAAATGGATGTGATAAAG+TGG + chr2.2:4480312-4480331 None:intergenic 35.0%
GGTAAAATGGGAAATGTTGA+CGG - chr2.2:4481054-4481073 MS.gene052045:CDS 35.0%
TAAGCTACGAGATGTTGTAT+GGG - chr2.2:4480843-4480862 MS.gene052045:CDS 35.0%
TATGGGAAAACACCGTTTAA+GGG - chr2.2:4480860-4480879 MS.gene052045:CDS 35.0%
TCTTGAACATCTTCATACCA+TGG - chr2.2:4480487-4480506 MS.gene052045:CDS 35.0%
TGGAGGAGCTAATGAAATTA+AGG - chr2.2:4481012-4481031 MS.gene052045:CDS 35.0%
TTAAGCTACGAGATGTTGTA+TGG - chr2.2:4480842-4480861 MS.gene052045:CDS 35.0%
TTGAAGAGATTAGGTTACGT+TGG - chr2.2:4480992-4481011 MS.gene052045:CDS 35.0%
!! AGAAGCTTGAATTTGTTGGA+AGG - chr2.2:4480921-4480940 MS.gene052045:CDS 35.0%
!! CCTTTGCCTAATATTTTGAG+TGG + chr2.2:4480161-4480180 None:intergenic 35.0%
!! GTTTTGTTGGATGAGGAAAA+CGG + chr2.2:4480195-4480214 None:intergenic 35.0%
!!! AAGGAGCATGAGTTTTTTAG+AGG - chr2.2:4481031-4481050 MS.gene052045:CDS 35.0%
!!! AGGAGCATGAGTTTTTTAGA+GGG - chr2.2:4481032-4481051 MS.gene052045:CDS 35.0%
AAAATGGGAAATGTTGACGG+AGG - chr2.2:4481057-4481076 MS.gene052045:CDS 40.0%
AAACGGCTAAGTTAATTGGC+TGG - chr2.2:4480354-4480373 MS.gene052045:CDS 40.0%
AAATAACCGTCATCTCTCGA+CGG + chr2.2:4481103-4481122 None:intergenic 40.0%
AAATGTTGACGGAGGTTGTA+CGG - chr2.2:4481065-4481084 MS.gene052045:CDS 40.0%
AACGGCTAAGTTAATTGGCT+GGG - chr2.2:4480355-4480374 MS.gene052045:CDS 40.0%
AAGAGATTAGGTTACGTTGG+AGG - chr2.2:4480995-4481014 MS.gene052045:CDS 40.0%
ACTCAATCGTCGAATTAGTC+CGG - chr2.2:4480685-4480704 MS.gene052045:CDS 40.0%
ATGGGAAAACACCGTTTAAG+GGG - chr2.2:4480861-4480880 MS.gene052045:CDS 40.0%
GTATGGGAAAACACCGTTTA+AGG - chr2.2:4480859-4480878 MS.gene052045:CDS 40.0%
TCATCTCTCGACGGAATAAA+CGG + chr2.2:4481094-4481113 None:intergenic 40.0%
TCTTGTGTACTAGGTGATGT+TGG + chr2.2:4480116-4480135 None:intergenic 40.0%
TGGAAGGAAAACAGCGTTAA+CGG - chr2.2:4480937-4480956 MS.gene052045:CDS 40.0%
TTTATTCCGTCGAGAGATGA+CGG - chr2.2:4481094-4481113 MS.gene052045:CDS 40.0%
! AGGTTAAGGTCTTGTGTACT+AGG + chr2.2:4480125-4480144 None:intergenic 40.0%
! GAGAGATGACGGTTATTTGA+CGG - chr2.2:4481105-4481124 MS.gene052045:CDS 40.0%
! GAGTTTTACGTTGAGATTCG+TGG + chr2.2:4480649-4480668 None:intergenic 40.0%
! GTTTGAGGTTGTTGAGGTTA+AGG + chr2.2:4480139-4480158 None:intergenic 40.0%
! TTGCTGTTGTTGAGAAGACA+CGG + chr2.2:4480436-4480455 None:intergenic 40.0%
!! CGTTAACGGATTTGATCGAA+CGG - chr2.2:4480951-4480970 MS.gene052045:CDS 40.0%
!!! CGTTGTTGTTTTGTTGGATG+AGG + chr2.2:4480202-4480221 None:intergenic 40.0%
!!! GGAGCATGAGTTTTTTAGAG+GGG - chr2.2:4481033-4481052 MS.gene052045:CDS 40.0%
AACTACTTTGAGTGCCATGG+TGG + chr2.2:4480231-4480250 None:intergenic 45.0%
ACCTCCTGAGCAATATGGAA+CGG + chr2.2:4480381-4480400 None:intergenic 45.0%
AGATCACCTCCTGAGCAATA+TGG + chr2.2:4480386-4480405 None:intergenic 45.0%
ATAAGACGTCGATCTCCCAA+CGG + chr2.2:4480289-4480308 None:intergenic 45.0%
CAACAACGTTAACACCACCA+TGG - chr2.2:4480214-4480233 MS.gene052045:CDS 45.0%
CGAAATCAGTTAACGTGACG+TGG + chr2.2:4480565-4480584 None:intergenic 45.0%
CTATCCTCAAACTCAGACGA+CGG + chr2.2:4481205-4481224 None:intergenic 45.0%
GATCGAACGGTTGTTAGAGA+AGG - chr2.2:4480964-4480983 MS.gene052045:CDS 45.0%
GGACTAATTCGACGATTGAG+TGG + chr2.2:4480686-4480705 None:intergenic 45.0%
GTCAACTACTTTGAGTGCCA+TGG + chr2.2:4480234-4480253 None:intergenic 45.0%
GTGGATTCTGCTATCTTCGA+CGG + chr2.2:4480630-4480649 None:intergenic 45.0%
TATTTGACGGCGGAGGAATT+CGG - chr2.2:4481118-4481137 MS.gene052045:CDS 45.0%
! AGATGACGGTTATTTGACGG+CGG - chr2.2:4481108-4481127 MS.gene052045:CDS 45.0%
! CATCCTGGGCAACTTTGAAA+CGG - chr2.2:4480337-4480356 MS.gene052045:CDS 45.0%
! CGAGTTAGACTTTTCACCGT+CGG + chr2.2:4480735-4480754 None:intergenic 45.0%
! TGAGTGGTTTGAGGTTGTTG+AGG + chr2.2:4480145-4480164 None:intergenic 45.0%
!! GCAGTTGATTTTTGGGCTCT+TGG - chr2.2:4480815-4480834 MS.gene052045:CDS 45.0%
AGAAGACACGGTCCGTTTGT+TGG + chr2.2:4480424-4480443 None:intergenic 50.0%
CAAAGTTGCCCAGGATGGAT+GGG + chr2.2:4480334-4480353 None:intergenic 50.0%
CCATTTCTCCCATCCATCCT+GGG - chr2.2:4480323-4480342 MS.gene052045:CDS 50.0%
CGTTTCAAAGTTGCCCAGGA+TGG + chr2.2:4480339-4480358 None:intergenic 50.0%
CTCAACGTAAAACTCGGCGA+TGG - chr2.2:4480654-4480673 MS.gene052045:CDS 50.0%
GTCACGATAAGCTATGCCCA+TGG + chr2.2:4480507-4480526 None:intergenic 50.0%
TAAGACGTCGATCTCCCAAC+GGG + chr2.2:4480288-4480307 None:intergenic 50.0%
TAGCCGTTTCAAAGTTGCCC+AGG + chr2.2:4480343-4480362 None:intergenic 50.0%
TCAAAGTTGCCCAGGATGGA+TGG + chr2.2:4480335-4480354 None:intergenic 50.0%
TCCATTTCTCCCATCCATCC+TGG - chr2.2:4480322-4480341 MS.gene052045:CDS 50.0%
TCTCTCGACGGAATAAACGG+TGG + chr2.2:4481091-4481110 None:intergenic 50.0%
! CACGGTCCGTTTGTTGGTAA+CGG + chr2.2:4480418-4480437 None:intergenic 50.0%
! CGTGGATTGAGTTTCTCCGA+CGG - chr2.2:4480716-4480735 MS.gene052045:CDS 50.0%
AATTGCCGTCGTCGCCGTTA+CGG - chr2.2:4481176-4481195 MS.gene052045:CDS 55.0%
ATTAGTCCGGTGAGTCGTCG+TGG - chr2.2:4480698-4480717 MS.gene052045:CDS 55.0%
CCCAGGATGGATGGGAGAAA+TGG + chr2.2:4480326-4480345 None:intergenic 55.0%
CGCGCTCCGTTACCAACAAA+CGG - chr2.2:4480409-4480428 MS.gene052045:CDS 55.0%
CTCAATCCACGACGACTCAC+CGG + chr2.2:4480707-4480726 None:intergenic 55.0%
GCCGTTCCATATTGCTCAGG+AGG - chr2.2:4480377-4480396 MS.gene052045:CDS 55.0%
GTCACCGTCGTCTGAGTTTG+AGG - chr2.2:4481198-4481217 MS.gene052045:CDS 55.0%
TCAGACGACGGTGACCGTAA+CGG + chr2.2:4481193-4481212 None:intergenic 55.0%
TGACGGTTATTTGACGGCGG+AGG - chr2.2:4481111-4481130 MS.gene052045:CDS 55.0%
TGGGCCGTTCCATATTGCTC+AGG - chr2.2:4480374-4480393 MS.gene052045:CDS 55.0%
CGAATTCATGTCCGTCGCCG+CGG + chr2.2:4480796-4480815 None:intergenic 60.0%
TTGACGGCGGAGGAATTCGG+TGG - chr2.2:4481121-4481140 MS.gene052045:CDS 60.0%
ACGTTCGGCGTCGTGTGTGG+AGG + chr2.2:4480261-4480280 None:intergenic 65.0%
CACAGCAGAGTACGTCGCCC+CGG - chr2.2:4480763-4480782 MS.gene052045:CDS 65.0%
CCGGAAGTAATCCGCGGCGA+CGG - chr2.2:4480782-4480801 MS.gene052045:CDS 65.0%
GGTGACCGTAACGGCGACGA+CGG + chr2.2:4481184-4481203 None:intergenic 65.0%
GTCGCCCCGGAAGTAATCCG+CGG - chr2.2:4480776-4480795 MS.gene052045:CDS 65.0%
TCGACGTTCGGCGTCGTGTG+TGG + chr2.2:4480264-4480283 None:intergenic 65.0%
! CCGTCGCCGCGGATTACTTC+CGG + chr2.2:4480785-4480804 None:intergenic 65.0%
! CGTCGCCGCGGATTACTTCC+GGG + chr2.2:4480784-4480803 None:intergenic 65.0%
! CTCCCAACGGGCTCGACGTT+CGG + chr2.2:4480276-4480295 None:intergenic 65.0%
! GGCGGAGGAATTCGGTGGAG+TGG - chr2.2:4481126-4481145 MS.gene052045:CDS 65.0%
! GTCGCCGCGGATTACTTCCG+GGG + chr2.2:4480783-4480802 None:intergenic 65.0%
ACGCCGAACGTCGAGCCCGT+TGG - chr2.2:4480270-4480289 MS.gene052045:CDS 70.0%
CGCCGAACGTCGAGCCCGTT+GGG - chr2.2:4480271-4480290 MS.gene052045:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4480104 4481246 4480104 ID=MS.gene052045
chr2.2 mRNA 4480104 4481246 4480104 ID=MS.gene052045.t1;Parent=MS.gene052045
chr2.2 exon 4480104 4481246 4480104 ID=MS.gene052045.t1.exon1;Parent=MS.gene052045.t1
chr2.2 CDS 4480104 4481246 4480104 ID=cds.MS.gene052045.t1;Parent=MS.gene052045.t1
Gene Sequence

>MS.gene052045

ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATATTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAACGTTAACACCACCATGGCACTCAAAGTAGTTGACAAATCCTCCACACACGACGCCGAACGTCGAGCCCGTTGGGAGATCGACGTCTTATCCACTTTATCACATCCATTTCTCCCATCCATCCTGGGCAACTTTGAAACGGCTAAGTTAATTGGCTGGGCCGTTCCATATTGCTCAGGAGGTGATCTAAACGCGCTCCGTTACCAACAAACGGACCGTGTCTTCTCAACAACAGCAATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTTGAACATCTTCATACCATGGGCATAGCTTATCGTGACCTTAAACCAGAAAACGTTCTTATTCAACAATCTGGCCACGTCACGTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACGGTTAGAACTTTAACCGTCGAAGATAGCAGAATCCACGAATCTCAACGTAAAACTCGGCGATGGAGAATTCCACTCAATCGTCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGACGGACATGAATTCGCAGTTGATTTTTGGGCTCTTGGAATTTTAAGCTACGAGATGTTGTATGGGAAAACACCGTTTAAGGGGAAGAATAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTGTTGGAAGGAAAACAGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGAGATTAGGTTACGTTGGAGGAGCTAATGAAATTAAGGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGTACGGCCACCGTTTATTCCGTCGAGAGATGACGGTTATTTGACGGCGGAGGAATTCGGTGGAGTGGATATAAGTGATTATTTTGATAAGCTGAAATTGCCGTCGTCGCCGTTACGGTCACCGTCGTCTGAGTTTGAGGATAGCGTTTCATTTGATGAGTTCTGA
Protein sequence

>MS.gene052045.t1

MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNNVNTTMALKVVDKSSTHDAERRARWEIDVLSTLSHPFLPSILGNFETAKLIGWAVPYCSGGDLNALRYQQTDRVFSTTAIRFYIAEILCALEHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDSRIHESQRKTRRWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGDGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFKKLEFVGRKTALTDLIERLLEKDPLKRLGYVGGANEIKEHEFFRGVKWEMLTEVVRPPFIPSRDDGYLTAEEFGGVDISDYFDKLKLPSSPLRSPSSEFEDSVSFDEF