AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45560.t1 MTR_2g098240 93.490 384 21 3 1 382 1 382 0.0 709
MS.gene45560.t1 MTR_4g065080 63.980 397 97 9 6 357 4 399 9.32e-174 491
MS.gene45560.t1 MTR_8g011780 45.352 355 159 6 9 333 12 361 4.05e-99 301
MS.gene45560.t1 MTR_7g053200 41.972 355 173 6 10 336 6 355 1.03e-89 277
MS.gene45560.t1 MTR_3g010260 38.144 388 194 9 11 355 411 795 2.35e-77 254
MS.gene45560.t1 MTR_4g113790 39.037 374 174 7 12 334 88 458 1.19e-76 245
MS.gene45560.t1 MTR_2g027240 39.011 364 177 8 12 333 201 561 2.38e-76 247
MS.gene45560.t1 MTR_1g060790 39.944 358 176 7 12 333 467 821 3.44e-76 252
MS.gene45560.t1 MTR_8g446990 39.286 364 178 8 8 333 125 483 5.26e-76 244
MS.gene45560.t1 MTR_2g062850 36.916 428 203 11 1 382 159 565 2.39e-75 244
MS.gene45560.t1 MTR_8g070530 40.854 328 171 5 10 331 592 902 7.38e-75 249
MS.gene45560.t1 MTR_6g004720 38.333 360 178 8 12 333 248 601 1.63e-74 243
MS.gene45560.t1 MTR_2g095980 43.252 326 171 6 10 330 366 682 8.36e-74 243
MS.gene45560.t1 MTR_2g085065 39.169 337 168 7 23 323 97 432 7.69e-73 234
MS.gene45560.t1 MTR_7g081665 38.770 374 179 9 11 343 360 724 2.30e-72 240
MS.gene45560.t1 MTR_2g095980 43.252 326 171 6 10 330 621 937 4.04e-72 243
MS.gene45560.t1 MTR_2g095980 43.252 326 171 6 10 330 621 937 5.76e-72 243
MS.gene45560.t1 MTR_8g006870 39.481 347 174 6 12 323 367 712 5.85e-72 239
MS.gene45560.t1 MTR_7g033640 36.813 364 185 7 12 333 229 589 7.40e-72 236
MS.gene45560.t1 MTR_7g104180 37.302 378 191 8 12 353 489 856 1.77e-71 239
MS.gene45560.t1 MTR_4g061610 41.692 331 159 8 8 330 637 941 3.97e-70 237
MS.gene45560.t1 MTR_2g069990 40.841 333 177 6 12 330 91 417 1.45e-69 226
MS.gene45560.t1 MTR_2g018990 38.592 355 182 10 12 333 74 425 2.51e-69 225
MS.gene45560.t1 MTR_8g089420 36.975 357 187 11 12 333 70 423 2.29e-68 223
MS.gene45560.t1 MTR_4g107280 32.055 365 181 10 20 371 92 402 9.32e-51 176
MS.gene45560.t1 MTR_6g470940 30.982 397 217 12 3 380 863 1221 5.69e-48 175
MS.gene45560.t1 MTR_7g073520 30.874 366 190 9 12 370 143 452 2.55e-47 167
MS.gene45560.t1 MTR_5g069000 31.563 339 208 9 3 334 748 1069 1.44e-44 165
MS.gene45560.t1 MTR_4g035835 31.563 339 208 9 3 334 744 1065 3.14e-44 164
MS.gene45560.t1 MTR_4g107280 29.972 357 160 10 20 371 92 363 6.50e-41 148
MS.gene45560.t1 MTR_2g040150 31.283 374 210 16 20 367 116 468 8.46e-39 145
MS.gene45560.t1 MTR_1g042700 29.429 350 199 11 12 337 110 435 1.27e-36 139
MS.gene45560.t1 MTR_1g019340 30.471 361 216 14 12 354 103 446 1.72e-36 138
MS.gene45560.t1 MTR_3g104700 30.423 378 220 14 12 364 89 448 1.80e-36 139
MS.gene45560.t1 MTR_1g019340 31.003 329 201 11 12 326 103 419 1.83e-36 139
MS.gene45560.t1 MTR_3g104700 29.771 393 220 15 12 364 89 465 5.18e-35 135
MS.gene45560.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 5.38e-35 134
MS.gene45560.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 6.70e-35 134
MS.gene45560.t1 MTR_1g069735 28.531 354 225 11 12 352 115 453 9.25e-35 135
MS.gene45560.t1 MTR_1g075880 27.451 357 223 11 12 349 112 451 3.15e-33 130
MS.gene45560.t1 MTR_1g442790 29.830 352 220 13 15 351 108 447 1.37e-32 128
MS.gene45560.t1 MTR_1g442790 29.830 352 220 13 15 351 108 447 2.25e-32 128
MS.gene45560.t1 MTR_7g097150 27.901 362 217 12 12 352 115 453 2.83e-32 127
MS.gene45560.t1 MTR_3g110405 29.795 292 152 7 14 300 34 277 1.12e-30 119
MS.gene45560.t1 MTR_8g035890 27.667 300 156 7 10 300 9 256 7.28e-29 114
MS.gene45560.t1 MTR_1g090917 28.659 328 186 8 8 329 47 332 9.06e-29 117
MS.gene45560.t1 MTR_1g090917 28.354 328 187 8 8 329 47 332 9.44e-29 117
MS.gene45560.t1 MTR_3g095620 28.525 305 158 9 23 317 31 285 9.56e-28 111
MS.gene45560.t1 MTR_8g040300 27.090 299 161 6 10 301 3 251 1.30e-27 110
MS.gene45560.t1 MTR_1g080020 29.110 292 140 8 23 300 15 253 2.44e-26 107
MS.gene45560.t1 MTR_2g020380 27.217 327 182 10 14 337 1 274 5.46e-26 110
MS.gene45560.t1 MTR_6g087000 29.478 268 124 7 113 375 855 1062 6.64e-26 110
MS.gene45560.t1 MTR_1g090917 30.579 242 128 5 92 329 2 207 2.73e-25 105
MS.gene45560.t1 MTR_1g090917 30.579 242 128 5 92 329 2 207 3.45e-25 105
MS.gene45560.t1 MTR_7g116390 27.869 305 156 9 10 300 9 263 8.91e-25 103
MS.gene45560.t1 MTR_5g045190 25.000 320 186 7 20 335 242 511 6.04e-24 104
MS.gene45560.t1 MTR_3g099920 26.708 322 180 8 1 316 1 272 1.89e-23 102
MS.gene45560.t1 MTR_8g024100 26.073 303 164 10 23 312 21 276 7.89e-22 97.8
MS.gene45560.t1 MTR_1g076370 27.157 313 172 10 1 304 5 270 1.45e-21 95.9
MS.gene45560.t1 MTR_2g016340 25.210 357 192 13 21 371 16 303 1.47e-21 96.3
MS.gene45560.t1 MTR_4g006970 25.617 324 184 11 1 316 1 275 4.58e-21 94.7
MS.gene45560.t1 MTR_3g466400 25.581 301 172 9 21 317 18 270 4.97e-21 94.7
MS.gene45560.t1 MTR_7g113490 25.079 315 165 9 21 317 72 333 5.61e-21 95.1
MS.gene45560.t1 MTR_6g012980 26.198 313 171 10 11 316 67 326 3.59e-20 92.0
MS.gene45560.t1 MTR_4g132070 26.266 316 153 12 21 316 95 350 1.23e-19 90.9
MS.gene45560.t1 MTR_3g099767 25.484 310 166 10 23 323 118 371 1.77e-19 90.1
MS.gene45560.t1 MTR_7g106710 27.508 309 154 11 23 316 141 394 1.80e-19 89.7
MS.gene45560.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.94e-19 90.5
MS.gene45560.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 2.02e-19 90.5
MS.gene45560.t1 MTR_2g078740 27.500 240 128 6 20 258 18 212 2.10e-19 90.5
MS.gene45560.t1 MTR_7g106710 27.508 309 154 11 23 316 141 394 3.29e-19 89.4
MS.gene45560.t1 MTR_8g086380 26.159 302 168 10 21 316 30 282 4.64e-19 89.0
MS.gene45560.t1 MTR_7g106710 27.508 309 154 11 23 316 141 394 5.97e-19 89.0
MS.gene45560.t1 MTR_7g106710 27.508 309 154 11 23 316 141 394 8.43e-19 88.6
MS.gene45560.t1 MTR_2g100030 25.676 296 174 8 41 319 42 308 2.12e-18 87.0
MS.gene45560.t1 MTR_7g072575 24.506 253 144 6 21 270 16 224 4.27e-18 85.9
MS.gene45560.t1 MTR_3g466480 25.321 312 164 10 21 313 25 286 4.53e-18 85.9
MS.gene45560.t1 MTR_4g029020 24.058 345 192 12 21 351 16 304 4.70e-18 85.9
MS.gene45560.t1 MTR_5g075060 23.102 303 175 10 21 316 16 267 8.75e-18 85.1
MS.gene45560.t1 MTR_1g013700 23.592 284 169 7 21 300 17 256 1.12e-17 84.3
MS.gene45560.t1 MTR_1g100250 25.141 354 181 13 4 337 395 684 1.33e-17 85.1
MS.gene45560.t1 MTR_1g048630 22.408 299 180 6 20 316 10 258 2.07e-17 84.7
MS.gene45560.t1 MTR_5g075100 26.897 290 153 11 21 300 27 267 2.38e-17 83.6
MS.gene45560.t1 MTR_8g093730 26.250 320 162 11 13 316 295 556 5.16e-17 83.2
MS.gene45560.t1 MTR_3g088715 38.532 109 56 3 213 316 24 126 7.30e-17 77.0
MS.gene45560.t1 MTR_1g040875 28.745 247 126 9 21 262 28 229 1.73e-16 80.9
MS.gene45560.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 1.99e-16 80.5
MS.gene45560.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.27e-16 80.5
MS.gene45560.t1 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.80e-16 80.5
MS.gene45560.t1 MTR_1g081000 22.727 242 143 2 20 260 7 205 6.85e-16 79.7
MS.gene45560.t1 MTR_1g081000 22.727 242 143 2 20 260 7 205 7.75e-16 79.3
MS.gene45560.t1 MTR_4g051648 21.136 317 195 5 20 333 11 275 8.43e-16 79.7
MS.gene45560.t1 MTR_3g096230 24.691 243 132 5 21 258 248 444 1.10e-15 79.0
MS.gene45560.t1 MTR_3g096230 24.691 243 132 5 21 258 248 444 2.14e-15 78.2
MS.gene45560.t1 MTR_1g103760 24.138 261 149 8 21 277 16 231 7.53e-15 76.3
MS.gene45560.t1 MTR_2g105010 24.916 297 171 9 10 300 7 257 1.10e-14 75.5
MS.gene45560.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.94e-14 75.1
MS.gene45560.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 2.08e-14 75.1
MS.gene45560.t1 MTR_1g105290 24.206 252 141 5 21 265 59 267 2.54e-14 74.7
MS.gene45560.t1 MTR_4g075410 26.360 239 128 4 23 258 26 219 3.80e-14 74.7
MS.gene45560.t1 MTR_4g075410 26.360 239 128 4 23 258 26 219 4.13e-14 74.7
MS.gene45560.t1 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.55e-14 74.3
MS.gene45560.t1 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.61e-14 74.3
MS.gene45560.t1 MTR_1g052115 21.379 290 180 6 14 299 1 246 6.24e-14 73.9
MS.gene45560.t1 MTR_3g076970 25.194 258 149 8 23 275 32 250 1.97e-13 71.2
MS.gene45560.t1 MTR_7g011800 23.398 359 193 11 12 336 115 425 3.85e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45560.t1 AT1G51170 56.818 396 144 8 7 379 13 404 4.14e-147 422
MS.gene45560.t1 AT3G20830 57.179 397 140 7 12 382 16 408 4.50e-147 422
MS.gene45560.t1 AT3G25250 47.839 347 155 5 12 338 12 352 9.62e-104 313
MS.gene45560.t1 AT4G13000 45.797 345 169 5 4 337 7 344 3.55e-99 299
MS.gene45560.t1 AT1G79250 38.482 382 187 8 12 347 141 520 2.31e-79 254
MS.gene45560.t1 AT1G79250 38.482 382 187 8 12 347 141 520 2.31e-79 254
MS.gene45560.t1 AT1G79250 38.482 382 187 8 12 347 141 520 2.31e-79 254
MS.gene45560.t1 AT1G79250 38.482 382 187 8 12 347 141 520 2.31e-79 254
MS.gene45560.t1 AT5G55910 39.891 366 178 7 12 337 104 467 6.24e-78 249
MS.gene45560.t1 AT5G55910 39.891 366 178 7 12 337 104 467 6.24e-78 249
MS.gene45560.t1 AT5G47750 40.331 362 173 9 12 333 186 544 2.33e-77 249
MS.gene45560.t1 AT3G12690 40.341 352 175 8 12 333 180 526 3.94e-77 249
MS.gene45560.t1 AT3G12690 40.341 352 175 8 12 333 180 526 3.94e-77 249
MS.gene45560.t1 AT3G12690 40.341 352 175 8 12 333 180 526 3.94e-77 249
MS.gene45560.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.71e-77 255
MS.gene45560.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.71e-77 255
MS.gene45560.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.71e-77 255
MS.gene45560.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.71e-77 255
MS.gene45560.t1 AT5G58140 41.493 335 163 7 8 331 568 880 4.71e-77 255
MS.gene45560.t1 AT2G36350 40.110 364 174 7 12 333 554 915 5.59e-77 256
MS.gene45560.t1 AT5G58140 41.945 329 158 7 8 325 568 874 2.15e-76 253
MS.gene45560.t1 AT5G40030 40.443 361 181 9 9 337 106 464 4.68e-76 244
MS.gene45560.t1 AT4G26610 39.617 366 175 8 12 337 118 477 2.85e-75 242
MS.gene45560.t1 AT2G44830 40.669 359 174 8 12 333 358 714 7.42e-75 247
MS.gene45560.t1 AT2G44830 40.669 359 174 8 12 333 358 714 7.42e-75 247
MS.gene45560.t1 AT2G44830 40.669 359 174 8 12 333 358 714 7.42e-75 247
MS.gene45560.t1 AT2G34650 39.080 348 186 8 10 334 68 412 2.48e-74 238
MS.gene45560.t1 AT1G16440 37.662 385 198 9 12 368 108 478 5.56e-74 238
MS.gene45560.t1 AT3G45780 42.988 328 167 5 8 330 654 966 7.30e-74 248
MS.gene45560.t1 AT3G45780 42.988 328 167 5 8 330 654 966 7.30e-74 248
MS.gene45560.t1 AT3G44610 38.793 348 165 7 23 323 75 421 4.60e-73 234
MS.gene45560.t1 AT3G52890 39.211 380 178 10 12 347 533 903 2.54e-72 243
MS.gene45560.t1 AT3G52890 39.211 380 178 10 12 347 533 903 2.54e-72 243
MS.gene45560.t1 AT3G52890 39.211 380 178 10 12 347 533 903 2.54e-72 243
MS.gene45560.t1 AT3G52890 39.211 380 178 10 12 347 533 903 2.54e-72 243
MS.gene45560.t1 AT5G03640 39.118 363 177 8 12 333 536 895 3.33e-71 239
MS.gene45560.t1 AT5G03640 39.118 363 177 8 12 333 536 895 3.33e-71 239
MS.gene45560.t1 AT3G27580 37.500 360 184 7 12 333 177 533 9.81e-71 232
MS.gene45560.t1 AT3G27580 37.500 360 184 7 12 333 177 533 9.81e-71 232
MS.gene45560.t1 AT1G53700 40.469 341 189 7 3 332 79 416 7.40e-69 224
MS.gene45560.t1 AT3G14370 38.261 345 178 8 8 330 79 410 1.23e-65 216
MS.gene45560.t1 AT3G08730 32.523 329 166 9 12 333 129 408 1.17e-49 174
MS.gene45560.t1 AT3G08730 32.523 329 166 9 12 333 129 408 1.17e-49 174
MS.gene45560.t1 AT3G08720 32.749 342 172 10 2 334 123 415 2.04e-49 173
MS.gene45560.t1 AT3G08720 32.749 342 172 10 2 334 123 415 2.04e-49 173
MS.gene45560.t1 AT3G08720 32.749 342 172 10 2 334 123 415 2.04e-49 173
MS.gene45560.t1 AT3G08720 32.749 342 172 10 2 334 123 415 2.04e-49 173
MS.gene45560.t1 AT1G45160 33.735 332 186 10 12 333 665 972 2.93e-44 164
MS.gene45560.t1 AT3G17850 29.923 391 216 14 3 363 869 1231 3.04e-44 164
MS.gene45560.t1 AT1G45160 33.134 335 184 10 12 333 665 972 3.17e-44 164
MS.gene45560.t1 AT1G48490 29.178 377 229 8 12 382 823 1167 9.09e-44 162
MS.gene45560.t1 AT1G48490 29.178 377 229 8 12 382 823 1167 9.09e-44 162
MS.gene45560.t1 AT1G48490 29.178 377 229 8 12 382 823 1167 9.09e-44 162
MS.gene45560.t1 AT5G62310 28.710 411 230 12 3 382 739 1117 9.99e-44 162
MS.gene45560.t1 AT1G48490 29.178 377 229 8 12 382 824 1168 1.01e-43 162
MS.gene45560.t1 AT2G19400 32.047 337 196 11 12 326 100 425 3.31e-41 152
MS.gene45560.t1 AT3G10540 30.408 319 179 7 21 333 49 330 1.00e-40 150
MS.gene45560.t1 AT5G04510 30.094 319 180 7 21 333 48 329 2.38e-39 145
MS.gene45560.t1 AT5G04510 30.094 319 180 7 21 333 48 329 5.85e-39 145
MS.gene45560.t1 AT1G30640 30.702 342 207 11 10 334 20 348 1.87e-38 144
MS.gene45560.t1 AT1G30640 30.702 342 207 11 10 334 113 441 5.55e-38 144
MS.gene45560.t1 AT1G30640 30.702 342 207 11 10 334 113 441 5.55e-38 144
MS.gene45560.t1 AT2G26700 46.835 158 81 2 12 166 82 239 2.08e-37 142
MS.gene45560.t1 AT2G26700 45.652 138 64 2 214 341 354 490 3.19e-31 124
MS.gene45560.t1 AT4G33080 29.167 336 206 8 12 326 89 413 9.88e-37 139
MS.gene45560.t1 AT4G33080 29.167 336 206 8 12 326 89 413 1.19e-36 139
MS.gene45560.t1 AT5G09890 28.977 352 216 12 12 345 97 432 3.69e-35 135
MS.gene45560.t1 AT5G09890 28.693 352 217 12 12 345 97 432 3.96e-35 135
MS.gene45560.t1 AT3G23310 29.143 350 202 12 12 337 115 442 1.54e-34 134
MS.gene45560.t1 AT1G03920 27.822 381 229 14 12 371 19 374 2.37e-33 129
MS.gene45560.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.19e-33 130
MS.gene45560.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.30e-33 130
MS.gene45560.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.30e-33 130
MS.gene45560.t1 AT4G14350 29.070 344 208 11 12 337 114 439 3.30e-33 130
MS.gene45560.t1 AT1G03920 27.851 377 226 14 12 367 132 483 9.59e-33 129
MS.gene45560.t1 AT1G03920 27.851 377 226 14 12 367 132 483 9.59e-33 129
MS.gene45560.t1 AT5G04510 30.686 277 150 8 21 292 48 287 9.98e-32 122
MS.gene45560.t1 AT2G45490 29.682 283 146 5 23 300 28 262 1.10e-31 121
MS.gene45560.t1 AT2G20470 26.260 377 239 13 12 371 119 473 5.79e-29 118
MS.gene45560.t1 AT2G20470 26.260 377 239 13 12 371 119 473 6.61e-29 118
MS.gene45560.t1 AT2G20470 26.260 377 239 13 12 371 119 473 6.61e-29 118
MS.gene45560.t1 AT2G45490 27.338 278 152 4 2 277 7 236 7.46e-29 113
MS.gene45560.t1 AT2G25880 28.322 286 152 7 21 301 29 266 7.39e-28 111
MS.gene45560.t1 AT2G25880 28.322 286 152 7 21 301 42 279 1.09e-27 111
MS.gene45560.t1 AT4G32830 29.123 285 149 7 21 300 35 271 1.21e-27 110
MS.gene45560.t1 AT5G18700 27.829 327 176 9 14 337 1 270 1.71e-27 115
MS.gene45560.t1 AT2G25880 28.322 286 152 7 21 301 90 327 3.82e-27 110
MS.gene45560.t1 AT2G20050 29.796 245 123 4 116 355 877 1077 9.68e-27 112
MS.gene45560.t1 AT2G20050 29.796 245 123 4 116 355 880 1080 1.11e-26 112
MS.gene45560.t1 AT4G18700 27.619 315 172 10 8 316 17 281 2.73e-24 104
MS.gene45560.t1 AT4G04720 26.498 317 153 12 21 317 84 340 8.11e-23 100
MS.gene45560.t1 AT4G04720 26.498 317 153 12 21 317 84 340 8.11e-23 100
MS.gene45560.t1 AT4G29810 26.994 326 176 9 3 316 56 331 3.74e-22 97.1
MS.gene45560.t1 AT4G29810 26.994 326 176 9 3 316 65 340 4.39e-22 97.1
MS.gene45560.t1 AT3G06030 26.332 319 163 9 21 321 72 336 1.08e-21 97.4
MS.gene45560.t1 AT1G29230 27.362 307 164 12 3 300 61 317 4.15e-21 95.1
MS.gene45560.t1 AT1G69220 24.342 304 178 6 20 319 252 507 1.01e-20 94.7
MS.gene45560.t1 AT4G29810 26.861 309 168 8 3 299 65 327 1.21e-20 92.4
MS.gene45560.t1 AT2G25090 27.541 305 168 10 21 316 19 279 2.17e-20 92.8
MS.gene45560.t1 AT5G25110 24.296 284 167 7 21 300 47 286 4.00e-20 92.0
MS.gene45560.t1 AT4G26070 26.154 325 178 8 4 316 42 316 5.76e-20 90.5
MS.gene45560.t1 AT1G69220 23.750 320 192 6 4 319 209 480 6.57e-20 92.0
MS.gene45560.t1 AT4G26070 26.154 325 178 8 4 316 55 329 6.85e-20 90.5
MS.gene45560.t1 AT4G26070 26.154 325 178 8 4 316 55 329 6.85e-20 90.5
MS.gene45560.t1 AT4G26070 26.154 325 178 8 4 316 54 328 7.90e-20 90.1
MS.gene45560.t1 AT1G54960 25.896 251 136 5 21 264 72 279 1.76e-19 90.9
MS.gene45560.t1 AT1G54960 25.896 251 136 5 21 264 72 279 1.76e-19 90.9
MS.gene45560.t1 AT2G34180 26.235 324 179 13 2 316 40 312 1.78e-19 90.5
MS.gene45560.t1 AT2G26980 25.836 329 175 13 21 340 18 286 2.09e-19 89.4
MS.gene45560.t1 AT4G21940 25.559 313 161 11 21 317 106 362 2.45e-19 89.7
MS.gene45560.t1 AT4G21940 25.559 313 161 11 21 317 106 362 2.57e-19 90.1
MS.gene45560.t1 AT2G26980 26.074 326 172 13 21 337 18 283 2.81e-19 89.4
MS.gene45560.t1 AT1G09000 24.800 250 140 4 21 264 73 280 3.04e-19 90.1
MS.gene45560.t1 AT4G21940 25.559 313 161 11 21 317 106 362 3.19e-19 89.7
MS.gene45560.t1 AT2G26980 25.836 329 175 13 21 340 18 286 3.28e-19 89.4
MS.gene45560.t1 AT2G26980 25.836 329 175 13 21 340 28 296 3.55e-19 89.4
MS.gene45560.t1 AT1G09000 24.400 250 141 3 21 264 73 280 3.90e-19 89.7
MS.gene45560.t1 AT5G45810 25.253 297 170 9 10 300 21 271 4.22e-19 89.0
MS.gene45560.t1 AT1G50240 22.623 305 184 6 20 322 9 263 9.74e-19 89.0
MS.gene45560.t1 AT1G50240 22.623 305 184 6 20 322 9 263 9.74e-19 89.0
MS.gene45560.t1 AT3G15220 27.500 240 128 6 20 258 18 212 1.11e-18 88.2
MS.gene45560.t1 AT4G26070 26.766 269 149 5 4 270 55 277 1.19e-18 86.3
MS.gene45560.t1 AT5G10930 23.509 285 169 7 21 300 16 256 1.57e-18 87.0
MS.gene45560.t1 AT1G08650 26.557 305 167 8 8 300 3 262 1.59e-18 85.5
MS.gene45560.t1 AT5G45820 25.172 290 157 9 21 300 16 255 1.79e-18 87.0
MS.gene45560.t1 AT1G08650 26.557 305 167 8 8 300 3 262 2.34e-18 84.7
MS.gene45560.t1 AT3G04530 25.424 295 166 6 15 300 9 258 3.02e-18 84.3
MS.gene45560.t1 AT3G50530 26.510 298 178 11 23 300 154 430 3.06e-18 87.0
MS.gene45560.t1 AT2G30360 26.667 285 161 10 21 300 25 266 4.20e-18 85.9
MS.gene45560.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.30e-18 85.5
MS.gene45560.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.30e-18 85.5
MS.gene45560.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.30e-18 85.5
MS.gene45560.t1 AT1G54510 23.967 242 140 3 20 260 7 205 8.30e-18 85.5
MS.gene45560.t1 AT5G01810 25.000 284 165 9 21 300 16 255 9.07e-18 84.3
MS.gene45560.t1 AT5G01810 24.648 284 166 8 21 300 16 255 1.11e-17 84.7
MS.gene45560.t1 AT5G01810 24.648 284 166 8 21 300 16 255 1.11e-17 84.7
MS.gene45560.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.57e-17 84.7
MS.gene45560.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.57e-17 84.7
MS.gene45560.t1 AT3G63280 22.635 296 179 5 20 312 7 255 1.57e-17 84.7
MS.gene45560.t1 AT5G14720 24.299 321 180 8 12 319 11 281 2.13e-17 84.3
MS.gene45560.t1 AT5G14720 24.299 321 180 8 12 319 11 281 2.13e-17 84.3
MS.gene45560.t1 AT3G63280 22.635 296 179 5 20 312 61 309 2.36e-17 84.3
MS.gene45560.t1 AT4G14580 25.641 312 174 10 1 300 1 266 2.98e-17 83.2
MS.gene45560.t1 AT2G26980 26.224 286 154 11 21 297 18 255 3.08e-17 81.3
MS.gene45560.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.26e-17 83.6
MS.gene45560.t1 AT1G53165 27.083 240 129 6 20 258 18 212 4.31e-17 83.6
MS.gene45560.t1 AT1G53165 27.083 240 129 6 20 258 18 212 5.00e-17 83.2
MS.gene45560.t1 AT2G17890 26.280 293 156 10 21 300 112 357 5.35e-17 83.2
MS.gene45560.t1 AT4G24400 24.590 305 165 11 21 315 13 262 8.45e-17 82.0
MS.gene45560.t1 AT3G44200 22.667 300 182 5 20 316 11 263 8.82e-17 82.8
MS.gene45560.t1 AT3G44200 22.667 300 182 5 20 316 11 263 8.82e-17 82.8
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 9.23e-17 82.4
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.07e-16 82.0
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.07e-16 82.0
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.07e-16 82.0
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.07e-16 82.0
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.07e-16 82.0
MS.gene45560.t1 AT4G04740 26.103 272 130 10 61 317 114 329 1.07e-16 82.0
MS.gene45560.t1 AT4G24400 24.194 310 160 11 21 315 13 262 1.11e-16 81.6
MS.gene45560.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.63e-16 81.6
MS.gene45560.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.63e-16 81.6
MS.gene45560.t1 AT5G28290 22.500 280 171 4 20 296 7 243 1.64e-16 81.6
MS.gene45560.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.93e-16 81.3
MS.gene45560.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.93e-16 81.3
MS.gene45560.t1 AT3G04810 24.498 249 142 5 14 260 1 205 1.93e-16 81.3
MS.gene45560.t1 AT1G63700 26.032 315 157 11 21 318 404 659 2.25e-16 81.6
MS.gene45560.t1 AT1G63700 26.032 315 157 11 21 318 404 659 2.25e-16 81.6
MS.gene45560.t1 AT1G18350 22.101 276 160 7 3 271 30 257 3.53e-16 79.0
MS.gene45560.t1 AT2G38490 25.000 244 138 6 21 262 32 232 6.55e-16 79.3
MS.gene45560.t1 AT1G53570 24.742 388 205 14 5 372 206 526 1.08e-15 79.0
MS.gene45560.t1 AT1G53570 24.742 388 205 14 5 372 206 526 1.08e-15 79.0
MS.gene45560.t1 AT1G53570 24.679 389 205 14 5 372 206 527 1.51e-15 78.6
MS.gene45560.t1 AT3G23000 24.912 285 161 10 23 300 31 269 1.61e-15 78.2
MS.gene45560.t1 AT3G20860 20.430 279 177 2 23 299 10 245 3.71e-15 77.0
MS.gene45560.t1 AT1G53570 24.675 385 203 14 5 369 206 523 3.86e-15 77.4
MS.gene45560.t1 AT1G53570 24.468 376 199 13 5 359 206 517 4.72e-15 77.0
MS.gene45560.t1 AT1G53570 24.611 386 203 14 5 369 206 524 5.36e-15 77.0
MS.gene45560.t1 AT4G30960 24.211 285 166 7 21 300 28 267 9.11e-15 75.9
MS.gene45560.t1 AT5G07070 23.320 253 147 7 21 270 16 224 1.05e-14 75.9
MS.gene45560.t1 AT1G73500 22.741 321 183 8 9 316 39 307 1.62e-14 73.9
MS.gene45560.t1 AT3G13530 26.360 239 128 4 23 258 26 219 9.15e-14 73.6
MS.gene45560.t1 AT1G32320 25.309 324 171 12 7 316 37 303 1.04e-13 71.6
MS.gene45560.t1 AT3G07980 24.576 236 136 1 23 258 26 219 1.70e-13 72.8
MS.gene45560.t1 AT3G07980 24.576 236 136 1 23 258 26 219 1.82e-13 72.8
MS.gene45560.t1 AT1G51660 24.481 241 128 4 23 258 85 276 8.23e-13 69.3
MS.gene45560.t1 AT2G25880 33.333 99 63 1 206 301 136 234 1.57e-12 67.4
MS.gene45560.t1 AT1G70430 24.104 307 165 8 23 319 22 270 1.98e-12 68.9
MS.gene45560.t1 AT1G70430 24.104 307 165 8 23 319 22 270 2.23e-12 68.9
MS.gene45560.t1 AT1G70430 24.104 307 165 8 23 319 22 270 2.29e-12 68.9
MS.gene45560.t1 AT5G50180 23.944 284 170 9 23 299 26 270 7.73e-12 66.2
MS.gene45560.t1 AT5G58140 30.435 115 77 2 8 120 568 681 5.39e-11 64.7

Find 96 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAAACGGCTAAGTTAAT+TGG 0.190646 2.1:-6102461 MS.gene45560:CDS
GTATGGGAAAACACCGTTTA+AGG 0.214990 2.1:-6101952 MS.gene45560:CDS
CCGTCGCCGCGGATTACTTC+CGG 0.327605 2.1:+6102029 None:intergenic
GTTTGAGGTTGTTGAGGTTA+AGG 0.334202 2.1:+6102675 None:intergenic
CTCCCAACGGGCTCGACGTT+CGG 0.347912 2.1:+6102538 None:intergenic
AACGTTCTTATTCAACAATC+TGG 0.349756 2.1:-6102272 MS.gene45560:CDS
CGTCGCCGCGGATTACTTCC+GGG 0.352639 2.1:+6102030 None:intergenic
TTCAAGAAGCTTGAATTTGT+TGG 0.364298 2.1:-6101894 MS.gene45560:CDS
TGGAGGAGCTAATGAAATTA+AGG 0.369595 2.1:-6101799 MS.gene45560:CDS
AGGTTAAGGTCTTGTGTACT+AGG 0.388335 2.1:+6102689 None:intergenic
TTCTTATTCTTCCCCTTAAA+CGG 0.388670 2.1:+6101939 None:intergenic
TATTTGACGGCGGAGGAATT+CGG 0.390287 2.1:-6101693 MS.gene45560:CDS
TATGGGAAAACACCGTTTAA+GGG 0.398885 2.1:-6101951 MS.gene45560:CDS
CGCCGAACGTCGAGCCCGTT+GGG 0.404219 2.1:-6102540 MS.gene45560:CDS
TCCATTTCTCCCATCCATCC+TGG 0.408154 2.1:-6102489 MS.gene45560:CDS
TGGAAGGAAAACAGCGTTAA+CGG 0.421220 2.1:-6101874 MS.gene45560:CDS
CTCAAACCACTCAAAATATT+AGG 0.425265 2.1:-6102659 MS.gene45560:CDS
AAGGATCCATTGAAGAGATT+AGG 0.425634 2.1:-6101828 MS.gene45560:CDS
AGATCACCTCCTGAGCAATA+TGG 0.427603 2.1:+6102428 None:intergenic
TTAAGCTACGAGATGTTGTA+TGG 0.433577 2.1:-6101969 MS.gene45560:CDS
TCATCTCTCGACGGAATAAA+CGG 0.437394 2.1:+6101720 None:intergenic
GTCACCGACGTCTGAGTTTG+AGG 0.449600 2.1:-6101607 MS.gene45560:CDS
CCCAGGATGGATGGGAGAAA+TGG 0.456473 2.1:+6102488 None:intergenic
CGTCGTCGTCGTCGCCGTTA+CGG 0.459014 2.1:-6101629 MS.gene45560:CDS
GAAAAGTCTAACTCGTTTGT+TGG 0.462299 2.1:-6102071 MS.gene45560:CDS
ACGTAAACTTTCACACAAAA+CGG 0.466415 2.1:-6102219 MS.gene45560:CDS
AAACGGCTAAGTTAATTGGC+TGG 0.472440 2.1:-6102457 MS.gene45560:CDS
TCAAAGTTGCCCAGGATGGA+TGG 0.472882 2.1:+6102479 None:intergenic
AGAAGACACGGTCCGTTTGT+TGG 0.477023 2.1:+6102390 None:intergenic
CTCAATCCACGACGACTCAC+CGG 0.481389 2.1:+6102107 None:intergenic
ATATTAGGCAAAGGAGCAAT+GGG 0.488514 2.1:-6102644 MS.gene45560:CDS
ACGTAACCTAATCTCTTCAA+TGG 0.502638 2.1:+6101822 None:intergenic
CGCGCTCCGTTACCAACAAA+CGG 0.503897 2.1:-6102402 MS.gene45560:CDS
GGTAAAATGGGAAATGTTGA+CGG 0.504814 2.1:-6101757 MS.gene45560:CDS
AATATTAGGCAAAGGAGCAA+TGG 0.515425 2.1:-6102645 MS.gene45560:CDS
GAATCTCTGCTATGTAGAAA+CGG 0.516064 2.1:+6102354 None:intergenic
AACGGCTAAGTTAATTGGCT+GGG 0.518921 2.1:-6102456 MS.gene45560:CDS
CAAAGTTGCCCAGGATGGAT+GGG 0.520980 2.1:+6102480 None:intergenic
AAATGTTGACGGAGGTTGTA+CGG 0.525214 2.1:-6101746 MS.gene45560:CDS
AAGAGATTAGGTTACGTTGG+AGG 0.527362 2.1:-6101816 MS.gene45560:CDS
GTGGATTCTGCTATCTTCCA+CGG 0.528823 2.1:+6102184 None:intergenic
TAAGACGTCGATCTCCCAAC+GGG 0.538002 2.1:+6102526 None:intergenic
GAGAAATGGATGTGATAAAG+TGG 0.543650 2.1:+6102502 None:intergenic
CACAGCAGAGTACGTCGCCC+CGG 0.544316 2.1:-6102048 MS.gene45560:CDS
GATCGAACGGTTGTTAGAGA+AGG 0.544362 2.1:-6101847 MS.gene45560:CDS
CATCCTGGGCAACTTTGAAA+CGG 0.545285 2.1:-6102474 MS.gene45560:CDS
CACGGTCCGTTTGTTGGTAA+CGG 0.546711 2.1:+6102396 None:intergenic
GGACTAATTCGACGATTGAG+TGG 0.549952 2.1:+6102128 None:intergenic
CCATTTCTCCCATCCATCCT+GGG 0.550555 2.1:-6102488 MS.gene45560:CDS
TAGCCGTTTCAAAGTTGCCC+AGG 0.553102 2.1:+6102471 None:intergenic
TGGGCCGTTCCATATTGCTC+AGG 0.553646 2.1:-6102437 MS.gene45560:CDS
AGAAGCTTGAATTTGTTGGA+AGG 0.553916 2.1:-6101890 MS.gene45560:CDS
TTGAAGAGATTAGGTTACGT+TGG 0.554323 2.1:-6101819 MS.gene45560:CDS
GTCAACTACTTTGAGTGCCA+TGG 0.555726 2.1:+6102580 None:intergenic
ACGTTCGGCGTCGTGTGTGG+AGG 0.558783 2.1:+6102553 None:intergenic
GAGAGATGACGGTTATTTGA+CGG 0.561885 2.1:-6101706 MS.gene45560:CDS
TTTATTCCGTCGAGAGATGA+CGG 0.563993 2.1:-6101717 MS.gene45560:CDS
CGTTTCAAAGTTGCCCAGGA+TGG 0.565181 2.1:+6102475 None:intergenic
ACTCAATCGTCGAATTAGTC+CGG 0.566855 2.1:-6102126 MS.gene45560:CDS
TCGACGTTCGGCGTCGTGTG+TGG 0.568999 2.1:+6102550 None:intergenic
GGCGGAGGAATTCGGTGGAG+TGG 0.569972 2.1:-6101685 MS.gene45560:CDS
ATTAGTCCGGTGAGTCGTCG+TGG 0.574660 2.1:-6102113 MS.gene45560:CDS
ACGCCGAACGTCGAGCCCGT+TGG 0.575774 2.1:-6102541 MS.gene45560:CDS
TGAGTGGTTTGAGGTTGTTG+AGG 0.578898 2.1:+6102669 None:intergenic
TGACGGTTATTTGACGGCGG+AGG 0.580618 2.1:-6101700 MS.gene45560:CDS
TAAGCTACGAGATGTTGTAT+GGG 0.582681 2.1:-6101968 MS.gene45560:CDS
AACGGTTAGAACTTTAACCG+TGG 0.586779 2.1:-6102201 MS.gene45560:CDS
CCGGAAGTAATCCGCGGCGA+CGG 0.589107 2.1:-6102029 MS.gene45560:CDS
GTCGCCGCGGATTACTTCCG+GGG 0.591913 2.1:+6102031 None:intergenic
CCACTCAAAATATTAGGCAA+AGG 0.592566 2.1:-6102653 MS.gene45560:CDS
ATGGGAAAACACCGTTTAAG+GGG 0.596069 2.1:-6101950 MS.gene45560:CDS
CTTGAACATCTTCATACCAT+GGG 0.597222 2.1:-6102323 MS.gene45560:CDS
TCTTGAACATCTTCATACCA+TGG 0.599326 2.1:-6102324 MS.gene45560:CDS
GCCGTTCCATATTGCTCAGG+AGG 0.603060 2.1:-6102434 MS.gene45560:CDS
TTGACGGCGGAGGAATTCGG+TGG 0.604647 2.1:-6101690 MS.gene45560:CDS
CGAAATCAGTTAACGTGACG+TGG 0.610579 2.1:+6102249 None:intergenic
ACCTCCTGAGCAATATGGAA+CGG 0.615838 2.1:+6102433 None:intergenic
ACGAATCTCAACGTAAAACT+CGG 0.616793 2.1:-6102163 MS.gene45560:CDS
TCTTGTGTACTAGGTGATGT+TGG 0.617524 2.1:+6102698 None:intergenic
CTCAACGTAAAACTCGGCGA+TGG 0.629173 2.1:-6102157 MS.gene45560:CDS
CGTTAACGGATTTGATCGAA+CGG 0.633392 2.1:-6101860 MS.gene45560:CDS
CGAATTCATGTCCGTCGCCG+CGG 0.635238 2.1:+6102018 None:intergenic
TCAGACGTCGGTGACCGTAA+CGG 0.637892 2.1:+6101615 None:intergenic
TTGCTGTTGTTGAGAAGACA+CGG 0.638083 2.1:+6102378 None:intergenic
CGTAACGGCGACGACGACGA+CGG 0.643814 2.1:+6101630 None:intergenic
ATAAGACGTCGATCTCCCAA+CGG 0.650869 2.1:+6102525 None:intergenic
CTATCCTCAAACTCAGACGT+CGG 0.653543 2.1:+6101603 None:intergenic
GTCGCCCCGGAAGTAATCCG+CGG 0.664172 2.1:-6102035 MS.gene45560:CDS
CGTGGATTGAGTTTCTCCGA+CGG 0.669810 2.1:-6102095 MS.gene45560:CDS
AAATAACCGTCATCTCTCGA+CGG 0.670876 2.1:+6101711 None:intergenic
GTCACGATAAGCTATGCCCA+TGG 0.680568 2.1:+6102307 None:intergenic
AACTACTTTGAGTGCCATGG+TGG 0.680601 2.1:+6102583 None:intergenic
AAAATGGGAAATGTTGACGG+AGG 0.693491 2.1:-6101754 MS.gene45560:CDS
AGATGACGGTTATTTGACGG+CGG 0.716338 2.1:-6101703 MS.gene45560:CDS
CAACAGCGTTAACACCACCA+TGG 0.717031 2.1:-6102597 MS.gene45560:CDS
TCTCTCGACGGAATAAACGG+TGG 0.757144 2.1:+6101723 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AACGTTCTTATTCAACAATC+TGG - chr2.1:6102016-6102035 MS.gene45560:CDS 30.0%
ACGTAAACTTTCACACAAAA+CGG - chr2.1:6102069-6102088 MS.gene45560:CDS 30.0%
CTCAAACCACTCAAAATATT+AGG - chr2.1:6101629-6101648 MS.gene45560:CDS 30.0%
TTCAAGAAGCTTGAATTTGT+TGG - chr2.1:6102394-6102413 MS.gene45560:CDS 30.0%
TTCTTATTCTTCCCCTTAAA+CGG + chr2.1:6102352-6102371 None:intergenic 30.0%
! TGTTGAATAAGAACGTTTTC+TGG + chr2.1:6102013-6102032 None:intergenic 30.0%
! TTTGAAACGGCTAAGTTAAT+TGG - chr2.1:6101827-6101846 MS.gene45560:CDS 30.0%
!! ATGAATTCGCAGTTGATTTT+TGG - chr2.1:6102284-6102303 MS.gene45560:CDS 30.0%
!! CTAATATTTTGAGTGGTTTG+AGG + chr2.1:6101631-6101650 None:intergenic 30.0%
!! TGAATTCGCAGTTGATTTTT+GGG - chr2.1:6102285-6102304 MS.gene45560:CDS 30.0%
!!! AGTTTTTTAGAGGGGTAAAA+TGG - chr2.1:6102518-6102537 MS.gene45560:CDS 30.0%
!!! GTTTTTTAGAGGGGTAAAAT+GGG - chr2.1:6102519-6102538 MS.gene45560:CDS 30.0%
!!! TAAGAACGTTTTCTGGTTTA+AGG + chr2.1:6102006-6102025 None:intergenic 30.0%
AAGGATCCATTGAAGAGATT+AGG - chr2.1:6102460-6102479 MS.gene45560:CDS 35.0%
AATATTAGGCAAAGGAGCAA+TGG - chr2.1:6101643-6101662 MS.gene45560:CDS 35.0%
ACGAATCTCAACGTAAAACT+CGG - chr2.1:6102125-6102144 MS.gene45560:CDS 35.0%
ACGTAACCTAATCTCTTCAA+TGG + chr2.1:6102469-6102488 None:intergenic 35.0%
ATATTAGGCAAAGGAGCAAT+GGG - chr2.1:6101644-6101663 MS.gene45560:CDS 35.0%
CCACTCAAAATATTAGGCAA+AGG - chr2.1:6101635-6101654 MS.gene45560:CDS 35.0%
CTTGAACATCTTCATACCAT+GGG - chr2.1:6101965-6101984 MS.gene45560:CDS 35.0%
GAAAAGTCTAACTCGTTTGT+TGG - chr2.1:6102217-6102236 MS.gene45560:CDS 35.0%
GAATCTCTGCTATGTAGAAA+CGG + chr2.1:6101937-6101956 None:intergenic 35.0%
GAGAAATGGATGTGATAAAG+TGG + chr2.1:6101789-6101808 None:intergenic 35.0%
GGTAAAATGGGAAATGTTGA+CGG - chr2.1:6102531-6102550 MS.gene45560:CDS 35.0%
TAAGCTACGAGATGTTGTAT+GGG - chr2.1:6102320-6102339 MS.gene45560:CDS 35.0%
TATGGGAAAACACCGTTTAA+GGG - chr2.1:6102337-6102356 MS.gene45560:CDS 35.0%
TCTTGAACATCTTCATACCA+TGG - chr2.1:6101964-6101983 MS.gene45560:CDS 35.0%
TGGAGGAGCTAATGAAATTA+AGG - chr2.1:6102489-6102508 MS.gene45560:CDS 35.0%
TTAAGCTACGAGATGTTGTA+TGG - chr2.1:6102319-6102338 MS.gene45560:CDS 35.0%
TTGAAGAGATTAGGTTACGT+TGG - chr2.1:6102469-6102488 MS.gene45560:CDS 35.0%
!! AGAAGCTTGAATTTGTTGGA+AGG - chr2.1:6102398-6102417 MS.gene45560:CDS 35.0%
!! CCTTTGCCTAATATTTTGAG+TGG + chr2.1:6101638-6101657 None:intergenic 35.0%
!! GTTTTGTTGGATGAGGAAAA+CGG + chr2.1:6101672-6101691 None:intergenic 35.0%
!!! AAGGAGCATGAGTTTTTTAG+AGG - chr2.1:6102508-6102527 MS.gene45560:CDS 35.0%
!!! AGGAGCATGAGTTTTTTAGA+GGG - chr2.1:6102509-6102528 MS.gene45560:CDS 35.0%
!!! TGTTAACGCTGTTGTTTTGT+TGG + chr2.1:6101685-6101704 None:intergenic 35.0%
AAAATGGGAAATGTTGACGG+AGG - chr2.1:6102534-6102553 MS.gene45560:CDS 40.0%
AAACGGCTAAGTTAATTGGC+TGG - chr2.1:6101831-6101850 MS.gene45560:CDS 40.0%
AAATAACCGTCATCTCTCGA+CGG + chr2.1:6102580-6102599 None:intergenic 40.0%
AAATGTTGACGGAGGTTGTA+CGG - chr2.1:6102542-6102561 MS.gene45560:CDS 40.0%
AACGGCTAAGTTAATTGGCT+GGG - chr2.1:6101832-6101851 MS.gene45560:CDS 40.0%
AACGGTTAGAACTTTAACCG+TGG - chr2.1:6102087-6102106 MS.gene45560:CDS 40.0%
AAGAGATTAGGTTACGTTGG+AGG - chr2.1:6102472-6102491 MS.gene45560:CDS 40.0%
ACTCAATCGTCGAATTAGTC+CGG - chr2.1:6102162-6102181 MS.gene45560:CDS 40.0%
ATGGGAAAACACCGTTTAAG+GGG - chr2.1:6102338-6102357 MS.gene45560:CDS 40.0%
GTATGGGAAAACACCGTTTA+AGG - chr2.1:6102336-6102355 MS.gene45560:CDS 40.0%
TCATCTCTCGACGGAATAAA+CGG + chr2.1:6102571-6102590 None:intergenic 40.0%
TCTTGTGTACTAGGTGATGT+TGG + chr2.1:6101593-6101612 None:intergenic 40.0%
TGGAAGGAAAACAGCGTTAA+CGG - chr2.1:6102414-6102433 MS.gene45560:CDS 40.0%
TTTATTCCGTCGAGAGATGA+CGG - chr2.1:6102571-6102590 MS.gene45560:CDS 40.0%
! AGGTTAAGGTCTTGTGTACT+AGG + chr2.1:6101602-6101621 None:intergenic 40.0%
! GAGAGATGACGGTTATTTGA+CGG - chr2.1:6102582-6102601 MS.gene45560:CDS 40.0%
! GAGTTTTACGTTGAGATTCG+TGG + chr2.1:6102126-6102145 None:intergenic 40.0%
! GTTTGAGGTTGTTGAGGTTA+AGG + chr2.1:6101616-6101635 None:intergenic 40.0%
! TTGCTGTTGTTGAGAAGACA+CGG + chr2.1:6101913-6101932 None:intergenic 40.0%
!! CGTTAACGGATTTGATCGAA+CGG - chr2.1:6102428-6102447 MS.gene45560:CDS 40.0%
!!! GGAGCATGAGTTTTTTAGAG+GGG - chr2.1:6102510-6102529 MS.gene45560:CDS 40.0%
AACTACTTTGAGTGCCATGG+TGG + chr2.1:6101708-6101727 None:intergenic 45.0%
ACCTCCTGAGCAATATGGAA+CGG + chr2.1:6101858-6101877 None:intergenic 45.0%
AGATCACCTCCTGAGCAATA+TGG + chr2.1:6101863-6101882 None:intergenic 45.0%
ATAAGACGTCGATCTCCCAA+CGG + chr2.1:6101766-6101785 None:intergenic 45.0%
CGAAATCAGTTAACGTGACG+TGG + chr2.1:6102042-6102061 None:intergenic 45.0%
CTATCCTCAAACTCAGACGT+CGG + chr2.1:6102688-6102707 None:intergenic 45.0%
GATCGAACGGTTGTTAGAGA+AGG - chr2.1:6102441-6102460 MS.gene45560:CDS 45.0%
GGACTAATTCGACGATTGAG+TGG + chr2.1:6102163-6102182 None:intergenic 45.0%
GTCAACTACTTTGAGTGCCA+TGG + chr2.1:6101711-6101730 None:intergenic 45.0%
GTGGATTCTGCTATCTTCCA+CGG + chr2.1:6102107-6102126 None:intergenic 45.0%
TATTTGACGGCGGAGGAATT+CGG - chr2.1:6102595-6102614 MS.gene45560:CDS 45.0%
! AGATGACGGTTATTTGACGG+CGG - chr2.1:6102585-6102604 MS.gene45560:CDS 45.0%
! CATCCTGGGCAACTTTGAAA+CGG - chr2.1:6101814-6101833 MS.gene45560:CDS 45.0%
! CGAGTTAGACTTTTCACCGT+CGG + chr2.1:6102212-6102231 None:intergenic 45.0%
! TGAGTGGTTTGAGGTTGTTG+AGG + chr2.1:6101622-6101641 None:intergenic 45.0%
!! GCAGTTGATTTTTGGGCTCT+TGG - chr2.1:6102292-6102311 MS.gene45560:CDS 45.0%
!!! CGCTGTTGTTTTGTTGGATG+AGG + chr2.1:6101679-6101698 None:intergenic 45.0%
AGAAGACACGGTCCGTTTGT+TGG + chr2.1:6101901-6101920 None:intergenic 50.0%
CAAAGTTGCCCAGGATGGAT+GGG + chr2.1:6101811-6101830 None:intergenic 50.0%
CAACAGCGTTAACACCACCA+TGG - chr2.1:6101691-6101710 MS.gene45560:CDS 50.0%
CCATTTCTCCCATCCATCCT+GGG - chr2.1:6101800-6101819 MS.gene45560:CDS 50.0%
CGTTTCAAAGTTGCCCAGGA+TGG + chr2.1:6101816-6101835 None:intergenic 50.0%
CTCAACGTAAAACTCGGCGA+TGG - chr2.1:6102131-6102150 MS.gene45560:CDS 50.0%
GTCACGATAAGCTATGCCCA+TGG + chr2.1:6101984-6102003 None:intergenic 50.0%
TAAGACGTCGATCTCCCAAC+GGG + chr2.1:6101765-6101784 None:intergenic 50.0%
TAGCCGTTTCAAAGTTGCCC+AGG + chr2.1:6101820-6101839 None:intergenic 50.0%
TCAAAGTTGCCCAGGATGGA+TGG + chr2.1:6101812-6101831 None:intergenic 50.0%
TCCATTTCTCCCATCCATCC+TGG - chr2.1:6101799-6101818 MS.gene45560:CDS 50.0%
TCTCTCGACGGAATAAACGG+TGG + chr2.1:6102568-6102587 None:intergenic 50.0%
! CACGGTCCGTTTGTTGGTAA+CGG + chr2.1:6101895-6101914 None:intergenic 50.0%
! CGTGGATTGAGTTTCTCCGA+CGG - chr2.1:6102193-6102212 MS.gene45560:CDS 50.0%
ATTAGTCCGGTGAGTCGTCG+TGG - chr2.1:6102175-6102194 MS.gene45560:CDS 55.0%
CCCAGGATGGATGGGAGAAA+TGG + chr2.1:6101803-6101822 None:intergenic 55.0%
CGCGCTCCGTTACCAACAAA+CGG - chr2.1:6101886-6101905 MS.gene45560:CDS 55.0%
CTCAATCCACGACGACTCAC+CGG + chr2.1:6102184-6102203 None:intergenic 55.0%
GCCGTTCCATATTGCTCAGG+AGG - chr2.1:6101854-6101873 MS.gene45560:CDS 55.0%
GTCACCGACGTCTGAGTTTG+AGG - chr2.1:6102681-6102700 MS.gene45560:CDS 55.0%
TCAGACGTCGGTGACCGTAA+CGG + chr2.1:6102676-6102695 None:intergenic 55.0%
TGACGGTTATTTGACGGCGG+AGG - chr2.1:6102588-6102607 MS.gene45560:CDS 55.0%
TGGGCCGTTCCATATTGCTC+AGG - chr2.1:6101851-6101870 MS.gene45560:CDS 55.0%
CGAATTCATGTCCGTCGCCG+CGG + chr2.1:6102273-6102292 None:intergenic 60.0%
TTGACGGCGGAGGAATTCGG+TGG - chr2.1:6102598-6102617 MS.gene45560:CDS 60.0%
ACGTTCGGCGTCGTGTGTGG+AGG + chr2.1:6101738-6101757 None:intergenic 65.0%
CACAGCAGAGTACGTCGCCC+CGG - chr2.1:6102240-6102259 MS.gene45560:CDS 65.0%
CCGGAAGTAATCCGCGGCGA+CGG - chr2.1:6102259-6102278 MS.gene45560:CDS 65.0%
CGTAACGGCGACGACGACGA+CGG + chr2.1:6102661-6102680 None:intergenic 65.0%
CGTCGTCGTCGTCGCCGTTA+CGG - chr2.1:6102659-6102678 MS.gene45560:CDS 65.0%
GTCGCCCCGGAAGTAATCCG+CGG - chr2.1:6102253-6102272 MS.gene45560:CDS 65.0%
TCGACGTTCGGCGTCGTGTG+TGG + chr2.1:6101741-6101760 None:intergenic 65.0%
! CCGTCGCCGCGGATTACTTC+CGG + chr2.1:6102262-6102281 None:intergenic 65.0%
! CGTCGCCGCGGATTACTTCC+GGG + chr2.1:6102261-6102280 None:intergenic 65.0%
! CTCCCAACGGGCTCGACGTT+CGG + chr2.1:6101753-6101772 None:intergenic 65.0%
! GGCGGAGGAATTCGGTGGAG+TGG - chr2.1:6102603-6102622 MS.gene45560:CDS 65.0%
! GTCGCCGCGGATTACTTCCG+GGG + chr2.1:6102260-6102279 None:intergenic 65.0%
ACGCCGAACGTCGAGCCCGT+TGG - chr2.1:6101747-6101766 MS.gene45560:CDS 70.0%
CGCCGAACGTCGAGCCCGTT+GGG - chr2.1:6101748-6101767 MS.gene45560:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 6101581 6102729 6101581 ID=MS.gene45560
chr2.1 mRNA 6101581 6102729 6101581 ID=MS.gene45560.t1;Parent=MS.gene45560
chr2.1 exon 6101581 6102729 6101581 ID=MS.gene45560.t1.exon1;Parent=MS.gene45560.t1
chr2.1 CDS 6101581 6102729 6101581 ID=cds.MS.gene45560.t1;Parent=MS.gene45560.t1
Gene Sequence

>MS.gene45560

ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATATTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAGCGTTAACACCACCATGGCACTCAAAGTAGTTGACAAATCCTCCACACACGACGCCGAACGTCGAGCCCGTTGGGAGATCGACGTCTTATCCACTTTATCACATCCATTTCTCCCATCCATCCTGGGCAACTTTGAAACGGCTAAGTTAATTGGCTGGGCCGTTCCATATTGCTCAGGAGGTGATCTAAACGCGCTCCGTTACCAACAAACGGACCGTGTCTTCTCAACAACAGCAATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTTGAACATCTTCATACCATGGGCATAGCTTATCGTGACCTTAAACCAGAAAACGTTCTTATTCAACAATCTGGCCACGTCACGTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACGGTTAGAACTTTAACCGTGGAAGATAGCAGAATCCACGAATCTCAACGTAAAACTCGGCGATGGAGAATTCCACTCAATCGTCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGACGGACATGAATTCGCAGTTGATTTTTGGGCTCTTGGAATTTTAAGCTACGAGATGTTGTATGGGAAAACACCGTTTAAGGGGAAGAATAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTGTTGGAAGGAAAACAGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGAGATTAGGTTACGTTGGAGGAGCTAATGAAATTAAGGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGTACGGCCACCGTTTATTCCGTCGAGAGATGACGGTTATTTGACGGCGGAGGAATTCGGTGGAGTGGATATAAGTGATTATTTTGATAAGCTGAAATTGCCGTCGTCGTCGTCGCCGTTACGGTCACCGACGTCTGAGTTTGAGGATAGCGTTTCATTTGATGAGTTCTGA
Protein sequence

>MS.gene45560.t1

MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNSVNTTMALKVVDKSSTHDAERRARWEIDVLSTLSHPFLPSILGNFETAKLIGWAVPYCSGGDLNALRYQQTDRVFSTTAIRFYIAEILCALEHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDSRIHESQRKTRRWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGDGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFKKLEFVGRKTALTDLIERLLEKDPLKRLGYVGGANEIKEHEFFRGVKWEMLTEVVRPPFIPSRDDGYLTAEEFGGVDISDYFDKLKLPSSSSPLRSPTSEFEDSVSFDEF