Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05213.t1 | RHN52552.1 | 94.8 | 812 | 36 | 3 | 1 | 808 | 1 | 810 | 0.00E+00 | 1498.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05213.t1 | Q8VY16 | 57.7 | 740 | 288 | 7 | 78 | 806 | 91 | 816 | 3.5e-234 | 812.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05213.t1 | A0A396HGT7 | 94.8 | 812 | 36 | 3 | 1 | 808 | 1 | 810 | 0.0e+00 | 1498.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05213 | MS.gene57834 | 0.899916 | 1.23E-77 | -1.69E-46 |
MS.gene05213 | MS.gene60585 | 0.802388 | 5.74E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05213.t1 | MTR_6g077830 | 94.704 | 812 | 37 | 3 | 1 | 808 | 1 | 810 | 0.0 | 1504 |
MS.gene05213.t1 | MTR_1g023310 | 24.526 | 791 | 465 | 24 | 74 | 805 | 76 | 793 | 4.29e-32 | 134 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05213.t1 | AT3G19180 | 57.873 | 743 | 286 | 9 | 78 | 808 | 91 | 818 | 0.0 | 814 |
MS.gene05213.t1 | AT3G19180 | 56.968 | 653 | 254 | 9 | 78 | 718 | 91 | 728 | 0.0 | 717 |
MS.gene05213.t1 | AT5G42480 | 24.746 | 788 | 458 | 24 | 80 | 805 | 84 | 798 | 1.45e-34 | 142 |
MS.gene05213.t1 | AT5G42480 | 23.555 | 692 | 399 | 21 | 80 | 710 | 84 | 706 | 4.66e-24 | 108 |
Find 175 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGAGTTCTTCCTCAAATT+TGG | 0.078551 | 6.2:-77375627 | MS.gene05213:CDS |
ACATCTTACCTGTAGTAATT+TGG | 0.159789 | 6.2:+77374190 | None:intergenic |
TTGTTTGCCATTCCCTAATA+AGG | 0.180910 | 6.2:+77375108 | None:intergenic |
GCACTCATCACAATGGAATT+TGG | 0.195030 | 6.2:-77375490 | MS.gene05213:CDS |
GTTCAGCTGCTTCCTCTAAA+AGG | 0.220030 | 6.2:+77374239 | None:intergenic |
ATCACGAAAGCTCCGTTTCT+AGG | 0.225529 | 6.2:-77380417 | MS.gene05213:CDS |
GGAATACGAAGGGAAGATTT+AGG | 0.230794 | 6.2:+77378644 | None:intergenic |
AGCCTCCTATACACATTAAT+AGG | 0.236538 | 6.2:+77375155 | None:intergenic |
CTATCTGGCAAAATTGAAAA+TGG | 0.247714 | 6.2:-77375557 | MS.gene05213:CDS |
GAAATCGACGGTTGAAATTC+CGG | 0.253252 | 6.2:-77380244 | MS.gene05213:CDS |
CCAAGCATTTCACAATTTAC+TGG | 0.261574 | 6.2:-77377135 | MS.gene05213:CDS |
AAGCCCACACTTGTACTTCT+TGG | 0.262483 | 6.2:-77375334 | MS.gene05213:CDS |
ATGAGTTCTTCCTCAAATTT+GGG | 0.263982 | 6.2:-77375626 | MS.gene05213:CDS |
AAGAAGCAGAAACCCTTATT+AGG | 0.274791 | 6.2:-77375121 | MS.gene05213:CDS |
AATAACACGCATTACCATAT+TGG | 0.278320 | 6.2:-77375432 | MS.gene05213:CDS |
CCCAAGACTGAATTACGTTT+TGG | 0.299465 | 6.2:+77376461 | None:intergenic |
CATCTTACCTGTAGTAATTT+GGG | 0.304144 | 6.2:+77374191 | None:intergenic |
GCTGACTCCTACTGATTTGC+AGG | 0.309331 | 6.2:-77375588 | MS.gene05213:CDS |
AAGTGTACAGTTGCGAAAAT+TGG | 0.310280 | 6.2:-77378271 | MS.gene05213:CDS |
AGGATCTTCTGATGGATGTT+AGG | 0.314087 | 6.2:-77378721 | MS.gene05213:CDS |
CAGTTAGGCCATTTACTTCA+TGG | 0.321581 | 6.2:+77375060 | None:intergenic |
AATTCCGGTTTCGTGTTATC+AGG | 0.323419 | 6.2:-77380229 | MS.gene05213:intron |
TTGCAGGGTTCACTGCTATC+TGG | 0.323882 | 6.2:-77375572 | MS.gene05213:CDS |
AGATGATTTAGTTCTTTCTA+TGG | 0.340179 | 6.2:-77378396 | MS.gene05213:CDS |
CCAAAACGTAATTCAGTCTT+GGG | 0.343492 | 6.2:-77376461 | MS.gene05213:CDS |
AAATGCAATACAACCCAATA+TGG | 0.345322 | 6.2:+77375418 | None:intergenic |
AACAATCAAAGCTGAAGCTC+TGG | 0.345889 | 6.2:-77375090 | MS.gene05213:CDS |
CAGCATACTCTGGCTCAAAT+AGG | 0.359233 | 6.2:+77378690 | None:intergenic |
ATAACACGCATTACCATATT+GGG | 0.361568 | 6.2:-77375431 | MS.gene05213:CDS |
GAATACGAAGGGAAGATTTA+GGG | 0.362467 | 6.2:+77378645 | None:intergenic |
GGAGAACAACCTTTAGTATC+TGG | 0.369320 | 6.2:+77375877 | None:intergenic |
GCCTCCTATACACATTAATA+GGG | 0.373871 | 6.2:+77375156 | None:intergenic |
CTGATAGAATGTCAGCTCTA+AGG | 0.377270 | 6.2:+77374296 | None:intergenic |
CAATTGAATCACAGAATCTA+AGG | 0.379058 | 6.2:-77377049 | MS.gene05213:CDS |
AGTCTTGGGGAAGGCAATAA+TGG | 0.380305 | 6.2:-77376447 | MS.gene05213:CDS |
CCCTTCGTATTCCTTGGTCT+TGG | 0.380905 | 6.2:-77378634 | MS.gene05213:CDS |
AATCTTCCCTTCGTATTCCT+TGG | 0.380984 | 6.2:-77378640 | MS.gene05213:CDS |
TAAAGGTTGTTCTCCAGCTT+TGG | 0.383435 | 6.2:-77375869 | MS.gene05213:intron |
TTTGCTTCTATTAAGTTGTT+GGG | 0.384647 | 6.2:-77375398 | MS.gene05213:CDS |
GGGCCTAGCCATGAAGTAAA+TGG | 0.385491 | 6.2:-77375068 | MS.gene05213:CDS |
ATTTGCTTCTATTAAGTTGT+TGG | 0.386106 | 6.2:-77375399 | MS.gene05213:CDS |
TGTTTGCCATTCCCTAATAA+GGG | 0.391739 | 6.2:+77375109 | None:intergenic |
CATGGCGGCGAAATTCGTTA+TGG | 0.395311 | 6.2:-77380390 | MS.gene05213:CDS |
ATTCCTTGGTCTTGGTTGCC+CGG | 0.406997 | 6.2:-77378626 | MS.gene05213:CDS |
CCACTTCGGCTTCCAGCATC+TGG | 0.414362 | 6.2:+77375209 | None:intergenic |
CTTCACTCGTGCTCAAGTAT+TGG | 0.417253 | 6.2:-77375459 | MS.gene05213:CDS |
TTGCCTATTCCTTCTTGGAC+TGG | 0.418090 | 6.2:-77376709 | MS.gene05213:intron |
GATAGTTGATCTTCTTCCTT+GGG | 0.418181 | 6.2:-77377105 | MS.gene05213:CDS |
CACAGGCCTCTATCCTCATC+TGG | 0.420663 | 6.2:-77375689 | MS.gene05213:CDS |
GCTTGCTCCCGCCTGCACCT+TGG | 0.423576 | 6.2:-77377294 | MS.gene05213:CDS |
GACAGCAAACCCCAAATTTG+AGG | 0.428769 | 6.2:+77375616 | None:intergenic |
TCTGGAAGCAAGAATTCTAA+AGG | 0.431850 | 6.2:-77375740 | MS.gene05213:CDS |
TCATCTTTCTCAGCTCGATC+AGG | 0.432761 | 6.2:+77378928 | None:intergenic |
TCCAAAACGTAATTCAGTCT+TGG | 0.434758 | 6.2:-77376462 | MS.gene05213:CDS |
TCATAGTGAGCCATCTGTTA+AGG | 0.436937 | 6.2:-77375528 | MS.gene05213:CDS |
AGAAGCAGAAACCCTTATTA+GGG | 0.438064 | 6.2:-77375120 | MS.gene05213:CDS |
AGATAGTTGATCTTCTTCCT+TGG | 0.440872 | 6.2:-77377106 | MS.gene05213:CDS |
CTGTAGGCCCTACATATATT+AGG | 0.441005 | 6.2:-77375286 | MS.gene05213:CDS |
GACATTCTATCAGATGGAAA+TGG | 0.441247 | 6.2:-77374286 | MS.gene05213:CDS |
CCAGTAAATTGTGAAATGCT+TGG | 0.445433 | 6.2:+77377135 | None:intergenic |
ATAGTTGATCTTACCAAAGC+TGG | 0.445903 | 6.2:+77375856 | None:intergenic |
GAGAAGAGAAATACCAATGA+TGG | 0.446238 | 6.2:+77376407 | None:intergenic |
AGGGTTTCTGCTTCTTCCAC+AGG | 0.449980 | 6.2:+77375128 | None:intergenic |
ATACCAGTCCAAGAAGGAAT+AGG | 0.451540 | 6.2:+77376706 | None:intergenic |
AGAACTAAATCATCTGCATA+TGG | 0.451871 | 6.2:+77378404 | None:intergenic |
TTTACTTCTTAGAAGACATT+GGG | 0.456435 | 6.2:+77378201 | None:intergenic |
TACTTTGCAGGATCTTCTGA+TGG | 0.459454 | 6.2:-77378729 | MS.gene05213:intron |
ATTCGTCAAGGACTTCAGTT+AGG | 0.459493 | 6.2:+77375045 | None:intergenic |
TCTTTGACAGTGGCAAGCTT+TGG | 0.462875 | 6.2:-77374377 | MS.gene05213:intron |
TAAGTTGTTGGGAATGAACC+TGG | 0.464753 | 6.2:-77375387 | MS.gene05213:CDS |
GATTTATATCCAGATACTAA+AGG | 0.467252 | 6.2:-77375886 | MS.gene05213:CDS |
TTCAGCTGCTTCCTCTAAAA+GGG | 0.467815 | 6.2:+77374240 | None:intergenic |
TGAGAAAGATGAAATTGTTA+AGG | 0.467885 | 6.2:-77378917 | MS.gene05213:CDS |
GAACGGAGGAAGTTGAAATC+TGG | 0.473083 | 6.2:-77380309 | MS.gene05213:CDS |
CCTCCCCTATTAATGTGTAT+AGG | 0.475135 | 6.2:-77375160 | MS.gene05213:CDS |
AGGCCATTTACTTCATGGCT+AGG | 0.476896 | 6.2:+77375065 | None:intergenic |
GGAATGAACCTGGGCAAGAA+TGG | 0.477784 | 6.2:-77375377 | MS.gene05213:CDS |
ACAATCAAAGCTGAAGCTCT+GGG | 0.478633 | 6.2:-77375089 | MS.gene05213:CDS |
GCTCAGTAGCTCCAAGGTGC+AGG | 0.478698 | 6.2:+77377283 | None:intergenic |
GGATCTTCTGATGGATGTTA+GGG | 0.479063 | 6.2:-77378720 | MS.gene05213:CDS |
AGCCATCTGTTAAGGTGAAA+AGG | 0.480305 | 6.2:-77375520 | MS.gene05213:CDS |
TTTACGCGAATTGATTAGAC+AGG | 0.480943 | 6.2:-77377210 | MS.gene05213:CDS |
TCAAAGCTTGTGCTGGACAT+TGG | 0.481912 | 6.2:-77378458 | MS.gene05213:CDS |
GAACTTTGCCTAATATATGT+AGG | 0.482824 | 6.2:+77375278 | None:intergenic |
ATCACCTGATAACACGAAAC+CGG | 0.483492 | 6.2:+77380225 | None:intergenic |
TTCAGGTTACCAGCATACTC+TGG | 0.485377 | 6.2:+77378680 | None:intergenic |
GGATGATGAGGTAAGAGCGC+TGG | 0.492780 | 6.2:+77375181 | None:intergenic |
CTGAACTTTGGCAGGAACTG+TGG | 0.497255 | 6.2:-77375927 | MS.gene05213:intron |
GGGCAAGAATGGTTCTAACT+TGG | 0.499925 | 6.2:-77375366 | MS.gene05213:CDS |
TGAAAGTTCGCTCATGGCAC+TGG | 0.500434 | 6.2:-77380484 | None:intergenic |
TTCAGCTGTAAACCCATCAT+TGG | 0.503054 | 6.2:-77376420 | MS.gene05213:intron |
AAGAAGGCCAGTCCTGTACT+TGG | 0.503886 | 6.2:+77377165 | None:intergenic |
GTTTACTTCTTAGAAGACAT+TGG | 0.508398 | 6.2:+77378200 | None:intergenic |
TATATTAGGCAAAGTTCTGT+TGG | 0.510437 | 6.2:-77375272 | MS.gene05213:CDS |
TTGAAGAAGGCATAGAGCAC+CGG | 0.511773 | 6.2:+77378607 | None:intergenic |
TGACGAATCTATGCTTGCTC+AGG | 0.512740 | 6.2:-77375030 | MS.gene05213:intron |
AGAGGCCTGTGACATATAGT+AGG | 0.518139 | 6.2:+77375701 | None:intergenic |
GGGCGTTGTTGCATCTCGCC+AGG | 0.521722 | 6.2:-77378848 | MS.gene05213:intron |
TTCGGCTTCCAGCATCTGGC+CGG | 0.523090 | 6.2:+77375213 | None:intergenic |
TGCTCTATGCCTTCTTCAAG+AGG | 0.523494 | 6.2:-77378603 | MS.gene05213:intron |
TGGAGAATCAAAGCTTGTGC+TGG | 0.524566 | 6.2:-77378465 | MS.gene05213:CDS |
GAGAAGAATAAAGTATCTCA+AGG | 0.527974 | 6.2:-77378244 | MS.gene05213:CDS |
CTGGCTAATGCTGCAGTGAT+CGG | 0.531267 | 6.2:-77380465 | MS.gene05213:CDS |
AAAAGAACCCAAATTACTAC+AGG | 0.532210 | 6.2:-77374198 | MS.gene05213:intron |
TTCTGTTGGCAACAAACTGA+AGG | 0.532277 | 6.2:-77375258 | MS.gene05213:CDS |
CAGTAGCTCCAAGGTGCAGG+CGG | 0.532300 | 6.2:+77377286 | None:intergenic |
AGTAGCTCCAAGGTGCAGGC+GGG | 0.534660 | 6.2:+77377287 | None:intergenic |
ATTGACGAAGGTTACACAAT+GGG | 0.535307 | 6.2:-77378868 | MS.gene05213:CDS |
TGAAGCTTCATGCCAAGTAC+AGG | 0.535843 | 6.2:-77377177 | MS.gene05213:CDS |
AGTTAGAACCATTCTTGCCC+AGG | 0.535928 | 6.2:+77375369 | None:intergenic |
CTATTTGAGCCAGAGTATGC+TGG | 0.537799 | 6.2:-77378689 | MS.gene05213:CDS |
AGAGGCAAGATGATGGATCA+TGG | 0.538393 | 6.2:-77374029 | MS.gene05213:CDS |
AACTTTGCCTAATATATGTA+GGG | 0.541936 | 6.2:+77375279 | None:intergenic |
CAGAAACCCTTATTAGGGAA+TGG | 0.545865 | 6.2:-77375115 | MS.gene05213:CDS |
CATATAGTAGGAAACATTTG+TGG | 0.547905 | 6.2:+77375713 | None:intergenic |
ACAGAACCAGATGAGGATAG+AGG | 0.549771 | 6.2:+77375683 | None:intergenic |
AAAGTGATGTTATTCTTGAA+CGG | 0.551237 | 6.2:-77380326 | MS.gene05213:CDS |
TTTACAGCTCATATGGCACT+TGG | 0.555063 | 6.2:-77376993 | MS.gene05213:CDS |
CGAATGTTTGATATCTTCAG+AGG | 0.555837 | 6.2:-77376760 | MS.gene05213:CDS |
AGAGCTGACATTCTATCAGA+TGG | 0.555858 | 6.2:-77374292 | MS.gene05213:CDS |
GATGATGAGGTAAGAGCGCT+GGG | 0.557239 | 6.2:+77375182 | None:intergenic |
AATGCTTGGCTTAGAAAAGA+AGG | 0.558801 | 6.2:+77377149 | None:intergenic |
TTGGCAGGAACTGTGGCTGA+AGG | 0.560030 | 6.2:-77375920 | MS.gene05213:intron |
AATCCAGGGCACAGAAGAAG+AGG | 0.565144 | 6.2:-77376522 | MS.gene05213:intron |
CCCCTATTAATGTGTATAGG+AGG | 0.566826 | 6.2:-77375157 | MS.gene05213:CDS |
TTCCATTGTGATGAGTGCTA+AGG | 0.569129 | 6.2:+77375495 | None:intergenic |
CCAACTGTACCTCTTGAAGA+AGG | 0.570398 | 6.2:+77378594 | None:intergenic |
TCATCTGCTAACTACACTGT+AGG | 0.579197 | 6.2:-77375302 | MS.gene05213:CDS |
AGAAGAGAAATACCAATGAT+GGG | 0.581742 | 6.2:+77376408 | None:intergenic |
TGAAGAAGGCATAGAGCACC+GGG | 0.583279 | 6.2:+77378608 | None:intergenic |
TCTTTCTATGGCACTAGCTG+AGG | 0.584125 | 6.2:-77378384 | MS.gene05213:intron |
CCGCCATGTGAACCTAGAAA+CGG | 0.585772 | 6.2:+77380405 | None:intergenic |
CCAGATGCTGGAAGCCGAAG+TGG | 0.585964 | 6.2:-77375209 | MS.gene05213:CDS |
TGTTTCCTACTATATGTCAC+AGG | 0.587830 | 6.2:-77375706 | MS.gene05213:CDS |
GTGATGTTATTCTTGAACGG+AGG | 0.588000 | 6.2:-77380323 | MS.gene05213:CDS |
CTTCATGCCAAGTACAGGAC+TGG | 0.591320 | 6.2:-77377172 | MS.gene05213:CDS |
AAGTTAAGTATGTTGTGAAG+AGG | 0.595970 | 6.2:-77374047 | MS.gene05213:CDS |
AAATCCACTGTTGAAATCGA+CGG | 0.596379 | 6.2:-77380256 | MS.gene05213:CDS |
TCAACCGTCGATTTCAACAG+TGG | 0.599244 | 6.2:+77380252 | None:intergenic |
TTTGTGTTAGTTCTCACGCT+GGG | 0.599361 | 6.2:-77380350 | MS.gene05213:CDS |
ATTAATAGGGGAGGATGATG+AGG | 0.599928 | 6.2:+77375169 | None:intergenic |
GTTGTGAAGAGGCAAGATGA+TGG | 0.603501 | 6.2:-77374036 | MS.gene05213:CDS |
AATACGAAGGGAAGATTTAG+GGG | 0.605176 | 6.2:+77378646 | None:intergenic |
CTGACTCCTACTGATTTGCA+GGG | 0.610771 | 6.2:-77375587 | MS.gene05213:CDS |
CAGTCCAAGAAGTACAAGTG+TGG | 0.612685 | 6.2:+77375330 | None:intergenic |
TCGTTCTACAGAACCAGATG+AGG | 0.615889 | 6.2:+77375676 | None:intergenic |
AGTGAACCCTGCAAATCAGT+AGG | 0.619099 | 6.2:+77375581 | None:intergenic |
ACCAAGACCAAGGAATACGA+AGG | 0.622297 | 6.2:+77378633 | None:intergenic |
ACGTAATTCAGTCTTGGGGA+AGG | 0.624041 | 6.2:-77376456 | MS.gene05213:CDS |
GCTCCGTTTCTAGGTTCACA+TGG | 0.625306 | 6.2:-77380408 | MS.gene05213:CDS |
ATCACAGCTAAGCTATCCCA+AGG | 0.627615 | 6.2:+77377089 | None:intergenic |
TGAGTTCTTCCTCAAATTTG+GGG | 0.628315 | 6.2:-77375625 | MS.gene05213:CDS |
CCTCCTATACACATTAATAG+GGG | 0.628581 | 6.2:+77375157 | None:intergenic |
AGAGTATGCTGGTAACCTGA+AGG | 0.631824 | 6.2:-77378678 | MS.gene05213:CDS |
GAGCGCTGGGTAAACCACTT+CGG | 0.632032 | 6.2:+77375195 | None:intergenic |
CCTATACACATTAATAGGGG+AGG | 0.634153 | 6.2:+77375160 | None:intergenic |
CGAGCAACGCTATACAGAGA+AGG | 0.635288 | 6.2:+77380441 | None:intergenic |
TGGCAAGCTCAGTAGCTCCA+AGG | 0.637274 | 6.2:+77377277 | None:intergenic |
AACCTTAGCACTCATCACAA+TGG | 0.637900 | 6.2:-77375497 | MS.gene05213:CDS |
AAGTTGTTGGGAATGAACCT+GGG | 0.638417 | 6.2:-77375386 | MS.gene05213:CDS |
GAAAATGTTGAACGAAGACG+AGG | 0.639250 | 6.2:-77377245 | MS.gene05213:CDS |
AGTCCAAGAAGTACAAGTGT+GGG | 0.640643 | 6.2:+77375331 | None:intergenic |
TCTGTTGGCAACAAACTGAA+GGG | 0.643143 | 6.2:-77375257 | MS.gene05213:CDS |
GAGCAAGCATAGATTCGTCA+AGG | 0.646455 | 6.2:+77375033 | None:intergenic |
CCAAGACCAAGGAATACGAA+GGG | 0.651865 | 6.2:+77378634 | None:intergenic |
CAAAACGTAATTCAGTCTTG+GGG | 0.653290 | 6.2:-77376460 | MS.gene05213:CDS |
TTACGCGAATTGATTAGACA+GGG | 0.659793 | 6.2:-77377209 | MS.gene05213:CDS |
GAATGTTTGATATCTTCAGA+GGG | 0.661370 | 6.2:-77376759 | MS.gene05213:CDS |
GCACCGGGCAACCAAGACCA+AGG | 0.671698 | 6.2:+77378623 | None:intergenic |
GTATAGGAGGCTGATGCCTG+TGG | 0.674492 | 6.2:-77375144 | MS.gene05213:CDS |
ATACGAAGGGAAGATTTAGG+GGG | 0.687120 | 6.2:+77378647 | None:intergenic |
CAATCAAAGCTGAAGCTCTG+GGG | 0.688046 | 6.2:-77375088 | MS.gene05213:CDS |
GAAGAACTCATATATGAGCG+AGG | 0.689059 | 6.2:+77375638 | None:intergenic |
AATTGACGAAGGTTACACAA+TGG | 0.699518 | 6.2:-77378869 | MS.gene05213:CDS |
CCGTTTCTAGGTTCACATGG+CGG | 0.704932 | 6.2:-77380405 | MS.gene05213:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTATTTATTGTTTATTATT+TGG | + | chr6.2:77376512-77376531 | None:intergenic | 10.0% |
!! | ATAAAATTTATAAAAAGACT+TGG | + | chr6.2:77377660-77377679 | None:intergenic | 10.0% |
!! | ATATTTGATTATATAAAAAG+CGG | + | chr6.2:77379488-77379507 | None:intergenic | 10.0% |
!! | ATTAAACTAAATTTATTAAC+TGG | + | chr6.2:77376592-77376611 | None:intergenic | 10.0% |
!! | AATACACTTAAAAATTTGAA+GGG | + | chr6.2:77376438-77376457 | None:intergenic | 15.0% |
!! | ATCATAGAATCTTAAAATAA+AGG | + | chr6.2:77378504-77378523 | None:intergenic | 15.0% |
!! | GTCTAATATTTATGTATTTA+GGG | - | chr6.2:77376654-77376673 | MS.gene05213:intron | 15.0% |
!! | TAATACACTTAAAAATTTGA+AGG | + | chr6.2:77376439-77376458 | None:intergenic | 15.0% |
!! | TGAAATTATTAGAGAAAAAA+TGG | - | chr6.2:77375188-77375207 | MS.gene05213:CDS | 15.0% |
!! | TTGAAATACTTAAAATTTGT+TGG | - | chr6.2:77379655-77379674 | MS.gene05213:intron | 15.0% |
!!! | ATTCATATTAAAGTTTTTTG+TGG | + | chr6.2:77379792-77379811 | None:intergenic | 15.0% |
!!! | CATATTTTATATCATCTTTT+TGG | - | chr6.2:77376980-77376999 | MS.gene05213:CDS | 15.0% |
!!! | GTATTTTTATTATGCAATTT+TGG | - | chr6.2:77375321-77375340 | MS.gene05213:CDS | 15.0% |
!!! | TAAATTGAAGACATTTTTTT+GGG | + | chr6.2:77379760-77379779 | None:intergenic | 15.0% |
!!! | TTAAATTGAAGACATTTTTT+TGG | + | chr6.2:77379761-77379780 | None:intergenic | 15.0% |
!!! | TTATTATTTGGTTCTAAAAA+AGG | + | chr6.2:77376500-77376519 | None:intergenic | 15.0% |
!!! | TTTTAGAAAATTAATGTTGT+TGG | - | chr6.2:77379822-77379841 | MS.gene05213:intron | 15.0% |
!! | AAAAATACTAGATAAGCATA+CGG | + | chr6.2:77376935-77376954 | None:intergenic | 20.0% |
!! | AAAGGAATCATTAATTAAAC+AGG | - | chr6.2:77376753-77376772 | MS.gene05213:CDS | 20.0% |
!! | AATATTTATGTATTTAGGGA+CGG | - | chr6.2:77376658-77376677 | MS.gene05213:intron | 20.0% |
!! | AATTATCTGTTATCACTTAT+CGG | + | chr6.2:77376873-77376892 | None:intergenic | 20.0% |
!! | ATAAACAATAAATACTGTCA+CGG | - | chr6.2:77376516-77376535 | MS.gene05213:CDS | 20.0% |
!! | ATAACATATATGATTATCTG+AGG | - | chr6.2:77379630-77379649 | MS.gene05213:intron | 20.0% |
!! | ATACACTTAAAAATTTGAAG+GGG | + | chr6.2:77376437-77376456 | None:intergenic | 20.0% |
!! | CAATTTCATAAAACATCATT+TGG | + | chr6.2:77375061-77375080 | None:intergenic | 20.0% |
!! | CTAGTAATAGTAATAATTGA+AGG | - | chr6.2:77374482-77374501 | MS.gene05213:intron | 20.0% |
!! | GGTCTAATATTTATGTATTT+AGG | - | chr6.2:77376653-77376672 | MS.gene05213:intron | 20.0% |
!! | TAGTAATAATTGAAGGAAAT+AGG | - | chr6.2:77374489-77374508 | MS.gene05213:intron | 20.0% |
!! | TAGTTAACGATACAAAAATA+TGG | + | chr6.2:77375371-77375390 | None:intergenic | 20.0% |
!! | TATAAGCTTAAAGAAATCTT+TGG | - | chr6.2:77375018-77375037 | MS.gene05213:intron | 20.0% |
!! | TCAAGAAATTTGTGTAATAA+AGG | + | chr6.2:77378151-77378170 | None:intergenic | 20.0% |
!! | TGAATTAGAAACAAAAACTA+GGG | + | chr6.2:77376796-77376815 | None:intergenic | 20.0% |
!! | TGGAAAATTAATACGTATTA+TGG | + | chr6.2:77376477-77376496 | None:intergenic | 20.0% |
!! | TTGAATTAGAAACAAAAACT+AGG | + | chr6.2:77376797-77376816 | None:intergenic | 20.0% |
!!! | AAAAGAGTACTTATGATATA+AGG | + | chr6.2:77377591-77377610 | None:intergenic | 20.0% |
!!! | AAAATGTTTATAAGCTTTGA+AGG | + | chr6.2:77377551-77377570 | None:intergenic | 20.0% |
!!! | AAAGTCTTTTAAATTGAATG+TGG | + | chr6.2:77377042-77377061 | None:intergenic | 20.0% |
!!! | ATATCATAAGTACTCTTTTT+GGG | - | chr6.2:77377592-77377611 | MS.gene05213:intron | 20.0% |
!!! | ATCGTTTTAACCTTAATTAT+TGG | - | chr6.2:77377790-77377809 | MS.gene05213:intron | 20.0% |
!!! | ATTTAAAAGACTTTAAGACT+TGG | - | chr6.2:77377048-77377067 | MS.gene05213:CDS | 20.0% |
!!! | ATTTCAAAATTAGTGTGTTT+TGG | - | chr6.2:77378261-77378280 | MS.gene05213:CDS | 20.0% |
!!! | CAAATGATGTTTTATGAAAT+TGG | - | chr6.2:77375059-77375078 | MS.gene05213:CDS | 20.0% |
!!! | TAACTATGTTTTGCTAAAAT+TGG | - | chr6.2:77375657-77375676 | MS.gene05213:CDS | 20.0% |
!!! | TATATCATAAGTACTCTTTT+TGG | - | chr6.2:77377591-77377610 | MS.gene05213:intron | 20.0% |
!!! | TTTTATATTATCTTTGACAG+TGG | - | chr6.2:77380080-77380099 | MS.gene05213:intron | 20.0% |
! | AAAGTGATGTTATTCTTGAA+CGG | - | chr6.2:77374141-77374160 | MS.gene05213:intron | 25.0% |
! | AACCTAACAAGTAAACTTAT+TGG | - | chr6.2:77375091-77375110 | MS.gene05213:CDS | 25.0% |
! | AACTTTGCCTAATATATGTA+GGG | + | chr6.2:77379191-77379210 | None:intergenic | 25.0% |
! | AAGAAATGAATCTTAGCATA+TGG | + | chr6.2:77378337-77378356 | None:intergenic | 25.0% |
! | AAGTTTATTAGCTACAATGT+AGG | + | chr6.2:77379882-77379901 | None:intergenic | 25.0% |
! | AATAGTGTGTTCAATCTTAT+TGG | - | chr6.2:77379917-77379936 | MS.gene05213:intron | 25.0% |
! | AATGTTGTTGGTATTATAGA+TGG | - | chr6.2:77379834-77379853 | MS.gene05213:intron | 25.0% |
! | AATTTACCATTGTGCAATTA+TGG | - | chr6.2:77377009-77377028 | MS.gene05213:CDS | 25.0% |
! | AGATAACAGCTAAAATTTGA+TGG | - | chr6.2:77378459-77378478 | MS.gene05213:CDS | 25.0% |
! | AGTAACTAGATGTTAATGAT+AGG | - | chr6.2:77374364-77374383 | MS.gene05213:CDS | 25.0% |
! | ATAAGATAAATGATGTTGCA+TGG | - | chr6.2:77374830-77374849 | MS.gene05213:intron | 25.0% |
! | ATTAATGTTATCTTCAATCC+AGG | - | chr6.2:77377930-77377949 | MS.gene05213:intron | 25.0% |
! | CAAAACTATAGCATAGATTT+AGG | - | chr6.2:77375297-77375316 | MS.gene05213:CDS | 25.0% |
! | CAAAGTAACATTTGGAAATA+AGG | - | chr6.2:77379966-77379985 | MS.gene05213:intron | 25.0% |
! | CATTTCAACTACAAAGAAAA+AGG | - | chr6.2:77376735-77376754 | MS.gene05213:CDS | 25.0% |
! | CTGTAGATTAGAAATATATG+AGG | - | chr6.2:77375230-77375249 | MS.gene05213:CDS | 25.0% |
! | GATTTATATCCAGATACTAA+AGG | - | chr6.2:77378581-77378600 | MS.gene05213:intron | 25.0% |
! | TAAACAATAAATACTGTCAC+GGG | - | chr6.2:77376517-77376536 | MS.gene05213:CDS | 25.0% |
! | TCAAATATTTCCAGAAAACA+GGG | + | chr6.2:77375952-77375971 | None:intergenic | 25.0% |
! | TCTAGTTACTTCGTAAAAAA+TGG | + | chr6.2:77374354-77374373 | None:intergenic | 25.0% |
! | TGAGAAAGATGAAATTGTTA+AGG | - | chr6.2:77375550-77375569 | MS.gene05213:CDS | 25.0% |
! | TGTATTATCACATTCCATAT+CGG | - | chr6.2:77377083-77377102 | MS.gene05213:CDS | 25.0% |
! | TTAATGTTATCTTCAATCCA+GGG | - | chr6.2:77377931-77377950 | MS.gene05213:intron | 25.0% |
! | TTATGAGAATGTTACAACAA+TGG | - | chr6.2:77375127-77375146 | MS.gene05213:CDS | 25.0% |
! | TTTACTTCTTAGAAGACATT+GGG | + | chr6.2:77376269-77376288 | None:intergenic | 25.0% |
!! | AATGCTCAAAAGAAATTTTC+TGG | - | chr6.2:77378709-77378728 | MS.gene05213:CDS | 25.0% |
!! | AATTATCATGTCCCTTTTTA+TGG | - | chr6.2:77376409-77376428 | MS.gene05213:intron | 25.0% |
!! | ATAGTTATTGATTACAGACA+TGG | - | chr6.2:77379996-77380015 | MS.gene05213:intron | 25.0% |
!! | ATGATATAAGGAGTATAGAA+GGG | + | chr6.2:77377579-77377598 | None:intergenic | 25.0% |
!! | ATTATCATGTCCCTTTTTAT+GGG | - | chr6.2:77376410-77376429 | MS.gene05213:intron | 25.0% |
!! | ATTTGCTTCTATTAAGTTGT+TGG | - | chr6.2:77379068-77379087 | MS.gene05213:intron | 25.0% |
!! | CTCATATATTTCTAATCTAC+AGG | + | chr6.2:77375232-77375251 | None:intergenic | 25.0% |
!! | CTTTTGAGCATTAAAGAAAT+TGG | + | chr6.2:77378701-77378720 | None:intergenic | 25.0% |
!! | GACATTTTGAATTTGAATCT+TGG | - | chr6.2:77377835-77377854 | MS.gene05213:intron | 25.0% |
!! | TATGATATAAGGAGTATAGA+AGG | + | chr6.2:77377580-77377599 | None:intergenic | 25.0% |
!! | TATTTTACCAGGAAAAGATT+AGG | - | chr6.2:77376687-77376706 | MS.gene05213:intron | 25.0% |
!! | TGATGTTTTATGAAATTGGA+TGG | - | chr6.2:77375063-77375082 | MS.gene05213:CDS | 25.0% |
!! | TTATAAAAAGACTTGGTATC+AGG | + | chr6.2:77377653-77377672 | None:intergenic | 25.0% |
!! | TTTGCTTCTATTAAGTTGTT+GGG | - | chr6.2:77379069-77379088 | MS.gene05213:intron | 25.0% |
!! | TTTTAGCAAAACATAGTTAG+TGG | + | chr6.2:77375656-77375675 | None:intergenic | 25.0% |
!!! | AAGGAAAGTATTATTGAAGA+AGG | + | chr6.2:77377532-77377551 | None:intergenic | 25.0% |
!!! | AGATGATTTAGTTCTTTCTA+TGG | - | chr6.2:77376071-77376090 | MS.gene05213:intron | 25.0% |
!!! | ATGTTTTTGATCTAAAGTGT+TGG | - | chr6.2:77374955-77374974 | MS.gene05213:intron | 25.0% |
!!! | TCTTATTTTTGTTTTCCTTC+AGG | - | chr6.2:77378100-77378119 | MS.gene05213:intron | 25.0% |
!!! | TTATTTGGTTCTAAAAAAGG+TGG | + | chr6.2:77376497-77376516 | None:intergenic | 25.0% |
!!! | TTTTATATCATCTTTTTGGC+TGG | - | chr6.2:77376984-77377003 | MS.gene05213:CDS | 25.0% |
AAAAATGACACTCTTATCTC+AGG | - | chr6.2:77376300-77376319 | MS.gene05213:intron | 30.0% | |
AAAAATGCAGAAATTGACGA+AGG | - | chr6.2:77375587-77375606 | MS.gene05213:CDS | 30.0% | |
AAAAGAACCCAAATTACTAC+AGG | - | chr6.2:77380269-77380288 | MS.gene05213:CDS | 30.0% | |
AAATGCAATACAACCCAATA+TGG | + | chr6.2:77379052-77379071 | None:intergenic | 30.0% | |
AAATTAATACACACGGTCAT+CGG | + | chr6.2:77375927-77375946 | None:intergenic | 30.0% | |
AAGTTAAGTATGTTGTGAAG+AGG | - | chr6.2:77380420-77380439 | MS.gene05213:CDS | 30.0% | |
AATAACACGCATTACCATAT+TGG | - | chr6.2:77379035-77379054 | MS.gene05213:intron | 30.0% | |
ACATCTTACCTGTAGTAATT+TGG | + | chr6.2:77380280-77380299 | None:intergenic | 30.0% | |
AGAAAAAATGGAGATGTGTT+TGG | - | chr6.2:77375200-77375219 | MS.gene05213:CDS | 30.0% | |
AGAACTAAATCATCTGCATA+TGG | + | chr6.2:77376066-77376085 | None:intergenic | 30.0% | |
AGAAGAGAAATACCAATGAT+GGG | + | chr6.2:77378062-77378081 | None:intergenic | 30.0% | |
ATAACACGCATTACCATATT+GGG | - | chr6.2:77379036-77379055 | MS.gene05213:intron | 30.0% | |
ATATACCCTATCCTTATCAT+AGG | - | chr6.2:77376163-77376182 | MS.gene05213:intron | 30.0% | |
ATCAAGAAGATCCTATGTTT+AGG | + | chr6.2:77376388-77376407 | None:intergenic | 30.0% | |
ATCACATGGAGAAAACTTAT+TGG | - | chr6.2:77380056-77380075 | MS.gene05213:intron | 30.0% | |
ATGAGTTCTTCCTCAAATTT+GGG | - | chr6.2:77378841-77378860 | MS.gene05213:intron | 30.0% | |
ATGGATATATTAGACAGGAT+AGG | - | chr6.2:77375154-77375173 | MS.gene05213:CDS | 30.0% | |
CAATAGAAAAATCTTGTCAC+TGG | - | chr6.2:77380122-77380141 | MS.gene05213:intron | 30.0% | |
CAATTGAATCACAGAATCTA+AGG | - | chr6.2:77377418-77377437 | MS.gene05213:intron | 30.0% | |
CACCAATAAGTTTACTTGTT+AGG | + | chr6.2:77375096-77375115 | None:intergenic | 30.0% | |
CAGAAACTAAATAAAAGCTG+AGG | + | chr6.2:77378403-77378422 | None:intergenic | 30.0% | |
CATATAGTAGGAAACATTTG+TGG | + | chr6.2:77378757-77378776 | None:intergenic | 30.0% | |
CATCTTACCTGTAGTAATTT+GGG | + | chr6.2:77380279-77380298 | None:intergenic | 30.0% | |
CATGATAAGGTTAGATATTC+AGG | + | chr6.2:77376907-77376926 | None:intergenic | 30.0% | |
CATTGTAGCTAATAAACTTG+TGG | - | chr6.2:77379883-77379902 | MS.gene05213:intron | 30.0% | |
CTAGGTCAAGACTAAAAAAT+GGG | + | chr6.2:77378198-77378217 | None:intergenic | 30.0% | |
CTATCTGGCAAAATTGAAAA+TGG | - | chr6.2:77378910-77378929 | MS.gene05213:CDS | 30.0% | |
CTCATCTAATATTACTTTGC+AGG | - | chr6.2:77375726-77375745 | MS.gene05213:CDS | 30.0% | |
CTGAATATCTAACCTTATCA+TGG | - | chr6.2:77376905-77376924 | MS.gene05213:intron | 30.0% | |
CTTTGGTAAGATCAACTATA+GGG | - | chr6.2:77378615-77378634 | MS.gene05213:CDS | 30.0% | |
GAAAGAAAAAATATTGCTGC+AGG | + | chr6.2:77377864-77377883 | None:intergenic | 30.0% | |
GAACTTTGCCTAATATATGT+AGG | + | chr6.2:77379192-77379211 | None:intergenic | 30.0% | |
GAATGTTTGATATCTTCAGA+GGG | - | chr6.2:77377708-77377727 | MS.gene05213:intron | 30.0% | |
GTCAAATATTTCCAGAAAAC+AGG | + | chr6.2:77375953-77375972 | None:intergenic | 30.0% | |
GTTTACTTCTTAGAAGACAT+TGG | + | chr6.2:77376270-77376289 | None:intergenic | 30.0% | |
TATATTAGGCAAAGTTCTGT+TGG | - | chr6.2:77379195-77379214 | MS.gene05213:intron | 30.0% | |
TATGAGTTCTTCCTCAAATT+TGG | - | chr6.2:77378840-77378859 | MS.gene05213:intron | 30.0% | |
TCAAGAAGATCCTATGTTTA+GGG | + | chr6.2:77376387-77376406 | None:intergenic | 30.0% | |
TCAATAAGACACCTATGATA+AGG | + | chr6.2:77376177-77376196 | None:intergenic | 30.0% | |
TCTAAGTGAGTTTGATGAAT+TGG | - | chr6.2:77374388-77374407 | MS.gene05213:intron | 30.0% | |
TCTTCATGATTTAGTCAACA+TGG | - | chr6.2:77376632-77376651 | MS.gene05213:intron | 30.0% | |
TTAAGTGTATATTCACTAGC+TGG | - | chr6.2:77376336-77376355 | MS.gene05213:intron | 30.0% | |
TTCTTTGTAGTTGAAATGAG+AGG | + | chr6.2:77376733-77376752 | None:intergenic | 30.0% | |
! | ATTAATTTCTCCCTGTTTTC+TGG | - | chr6.2:77375939-77375958 | MS.gene05213:intron | 30.0% |
! | GAAATTCGTTATGGATTTTG+TGG | - | chr6.2:77374086-77374105 | MS.gene05213:intron | 30.0% |
! | GAGAAGAATAAAGTATCTCA+AGG | - | chr6.2:77376223-77376242 | MS.gene05213:intron | 30.0% |
! | GTTTTGCTTGTAACTTTCTT+TGG | + | chr6.2:77375283-77375302 | None:intergenic | 30.0% |
! | TAGAGTTTTTACAGCTCATA+TGG | - | chr6.2:77377467-77377486 | MS.gene05213:intron | 30.0% |
! | TCCTTTGTTTAACTGATAAC+CGG | - | chr6.2:77380303-77380322 | MS.gene05213:CDS | 30.0% |
! | TCTCATTGTGTGCTATTAAT+CGG | - | chr6.2:77378231-77378250 | MS.gene05213:CDS | 30.0% |
! | TGTAGAACGAAAAGATTTTG+AGG | - | chr6.2:77378804-77378823 | MS.gene05213:intron | 30.0% |
! | TTTGGCTCATTGAATATGAT+TGG | - | chr6.2:77375339-77375358 | MS.gene05213:CDS | 30.0% |
!! | CTCAGCTTTTATTTAGTTTC+TGG | - | chr6.2:77378401-77378420 | MS.gene05213:CDS | 30.0% |
!! | TTCCAAATGTTACTTTGTGT+GGG | + | chr6.2:77379963-77379982 | None:intergenic | 30.0% |
!! | TTTCCAAATGTTACTTTGTG+TGG | + | chr6.2:77379964-77379983 | None:intergenic | 30.0% |
!!! | ATTTTTTAGTCTTGACCTAG+CGG | - | chr6.2:77378198-77378217 | MS.gene05213:CDS | 30.0% |
!!! | TTGAGTTTTTTGCTGAACTT+TGG | - | chr6.2:77378528-77378547 | MS.gene05213:intron | 30.0% |
!!! | TTTTTTTCCCCATGTTATGA+AGG | - | chr6.2:77375416-77375435 | MS.gene05213:CDS | 30.0% |
AAAAACATACCAGTCCAAGA+AGG | + | chr6.2:77377770-77377789 | None:intergenic | 35.0% | |
AAATCCACTGTTGAAATCGA+CGG | - | chr6.2:77374211-77374230 | MS.gene05213:CDS | 35.0% | |
AAATGAGAGGTGGAGTTTAT+AGG | + | chr6.2:77376720-77376739 | None:intergenic | 35.0% | |
AAATTCACCCTCTCTCATAA+AGG | - | chr6.2:77376546-77376565 | MS.gene05213:intron | 35.0% | |
AAGAAGCAGAAACCCTTATT+AGG | - | chr6.2:77379346-77379365 | MS.gene05213:intron | 35.0% | |
AAGACACCTATGATAAGGAT+AGG | + | chr6.2:77376172-77376191 | None:intergenic | 35.0% | |
AAGTGAGTTTGATGAATTGG+AGG | - | chr6.2:77374391-77374410 | MS.gene05213:intron | 35.0% | |
AAGTGTACAGTTGCGAAAAT+TGG | - | chr6.2:77376196-77376215 | MS.gene05213:intron | 35.0% | |
AAGTTTACCCTTTATGAGAG+AGG | + | chr6.2:77376557-77376576 | None:intergenic | 35.0% | |
AATACGAAGGGAAGATTTAG+GGG | + | chr6.2:77375824-77375843 | None:intergenic | 35.0% | |
AATGCTTGGCTTAGAAAAGA+AGG | + | chr6.2:77377321-77377340 | None:intergenic | 35.0% | |
AATGTGATAATACACGAGAG+AGG | + | chr6.2:77377077-77377096 | None:intergenic | 35.0% | |
AATTCACCCTCTCTCATAAA+GGG | - | chr6.2:77376547-77376566 | MS.gene05213:intron | 35.0% | |
AATTGACGAAGGTTACACAA+TGG | - | chr6.2:77375598-77375617 | MS.gene05213:CDS | 35.0% | |
ACATGGGGAAAAAAATGCAA+AGG | + | chr6.2:77375411-77375430 | None:intergenic | 35.0% | |
AGAAGCAGAAACCCTTATTA+GGG | - | chr6.2:77379347-77379366 | MS.gene05213:intron | 35.0% | |
AGACACCTATGATAAGGATA+GGG | + | chr6.2:77376171-77376190 | None:intergenic | 35.0% | |
AGATAGTTGATCTTCTTCCT+TGG | - | chr6.2:77377361-77377380 | MS.gene05213:intron | 35.0% | |
AGCATATGGCGTTTACATTT+AGG | + | chr6.2:77378323-77378342 | None:intergenic | 35.0% | |
AGCCTCCTATACACATTAAT+AGG | + | chr6.2:77379315-77379334 | None:intergenic | 35.0% | |
AGTGTGTTCAATCTTATTGG+AGG | - | chr6.2:77379920-77379939 | MS.gene05213:intron | 35.0% | |
AGTTTACCCTTTATGAGAGA+GGG | + | chr6.2:77376556-77376575 | None:intergenic | 35.0% | |
ATAGCACACAATGAGAACAT+AGG | + | chr6.2:77378227-77378246 | None:intergenic | 35.0% | |
ATAGTTGATCTTACCAAAGC+TGG | + | chr6.2:77378614-77378633 | None:intergenic | 35.0% | |
ATGTTACAACAATGGAGGAA+TGG | - | chr6.2:77375135-77375154 | MS.gene05213:CDS | 35.0% | |
ATTGACGAAGGTTACACAAT+GGG | - | chr6.2:77375599-77375618 | MS.gene05213:CDS | 35.0% | |
CAAAACGTAATTCAGTCTTG+GGG | - | chr6.2:77378007-77378026 | MS.gene05213:intron | 35.0% | |
CAGGGAGAAATTAATACACA+CGG | + | chr6.2:77375934-77375953 | None:intergenic | 35.0% | |
CATGGAATTGAATGTTGGAA+GGG | - | chr6.2:77374848-77374867 | MS.gene05213:intron | 35.0% | |
CATGGGGAAAAAAATGCAAA+GGG | + | chr6.2:77375410-77375429 | None:intergenic | 35.0% | |
CCAAAACGTAATTCAGTCTT+GGG | - | chr6.2:77378006-77378025 | MS.gene05213:intron | 35.0% | |
CCAAGCATTTCACAATTTAC+TGG | - | chr6.2:77377332-77377351 | MS.gene05213:intron | 35.0% | |
CCAGTAAATTGTGAAATGCT+TGG | + | chr6.2:77377335-77377354 | None:intergenic | 35.0% | |
CCTCCTATACACATTAATAG+GGG | + | chr6.2:77379313-77379332 | None:intergenic | 35.0% | |
CGAATGTTTGATATCTTCAG+AGG | - | chr6.2:77377707-77377726 | MS.gene05213:intron | 35.0% | |
CTGTAATGATGAGATTGTCA+GGG | - | chr6.2:77374901-77374920 | MS.gene05213:intron | 35.0% | |
CTTAACAGTTGATTGCTATC+CGG | + | chr6.2:77380325-77380344 | None:intergenic | 35.0% | |
GAAAGTTATGCGCTATCATA+TGG | - | chr6.2:77379581-77379600 | MS.gene05213:intron | 35.0% | |
GAATACGAAGGGAAGATTTA+GGG | + | chr6.2:77375825-77375844 | None:intergenic | 35.0% | |
GACATTCTATCAGATGGAAA+TGG | - | chr6.2:77380181-77380200 | MS.gene05213:intron | 35.0% | |
GACTAAAAAATGGGAGGAAA+TGG | + | chr6.2:77378189-77378208 | None:intergenic | 35.0% | |
GAGAAGAGAAATACCAATGA+TGG | + | chr6.2:77378063-77378082 | None:intergenic | 35.0% | |
GAGGAATGGATATATTAGAC+AGG | - | chr6.2:77375149-77375168 | MS.gene05213:CDS | 35.0% | |
GATAGTTGATCTTCTTCCTT+GGG | - | chr6.2:77377362-77377381 | MS.gene05213:intron | 35.0% | |
GATGAATTGGAGGAATGATT+GGG | - | chr6.2:77374401-77374420 | MS.gene05213:intron | 35.0% | |
GCCTCCTATACACATTAATA+GGG | + | chr6.2:77379314-77379333 | None:intergenic | 35.0% | |
GCTAGGTCAAGACTAAAAAA+TGG | + | chr6.2:77378199-77378218 | None:intergenic | 35.0% | |
GCTTTGGTAAGATCAACTAT+AGG | - | chr6.2:77378614-77378633 | MS.gene05213:CDS | 35.0% | |
GTGTGTTCAATCTTATTGGA+GGG | - | chr6.2:77379921-77379940 | MS.gene05213:intron | 35.0% | |
TACCATTGTGCAATTATGGT+TGG | - | chr6.2:77377013-77377032 | MS.gene05213:CDS | 35.0% | |
TAGCACACAATGAGAACATA+GGG | + | chr6.2:77378226-77378245 | None:intergenic | 35.0% | |
TATATGCAAGTCCGTTTCAT+TGG | - | chr6.2:77379708-77379727 | MS.gene05213:intron | 35.0% | |
TCCAAAACGTAATTCAGTCT+TGG | - | chr6.2:77378005-77378024 | MS.gene05213:intron | 35.0% | |
TCCGGTTATCAGTTAAACAA+AGG | + | chr6.2:77380307-77380326 | None:intergenic | 35.0% | |
TCTATTCCTTCTGTTCAGAT+TGG | - | chr6.2:77375982-77376001 | MS.gene05213:intron | 35.0% | |
TCTCTCATAAAGGGTAAACT+TGG | - | chr6.2:77376556-77376575 | MS.gene05213:intron | 35.0% | |
TCTGGAAGCAAGAATTCTAA+AGG | - | chr6.2:77378727-77378746 | MS.gene05213:intron | 35.0% | |
TGAGAATGTTACAACAATGG+AGG | - | chr6.2:77375130-77375149 | MS.gene05213:CDS | 35.0% | |
TGAGTTCTTCCTCAAATTTG+GGG | - | chr6.2:77378842-77378861 | MS.gene05213:intron | 35.0% | |
TGATGAATTGGAGGAATGAT+TGG | - | chr6.2:77374400-77374419 | MS.gene05213:intron | 35.0% | |
TGTAGAATCTCGCAGAAAAT+TGG | + | chr6.2:77377898-77377917 | None:intergenic | 35.0% | |
TGTTGCATGGAATTGAATGT+TGG | - | chr6.2:77374843-77374862 | MS.gene05213:intron | 35.0% | |
TGTTTCCTACTATATGTCAC+AGG | - | chr6.2:77378761-77378780 | MS.gene05213:intron | 35.0% | |
TGTTTGCCATTCCCTAATAA+GGG | + | chr6.2:77379361-77379380 | None:intergenic | 35.0% | |
TTAAACACTTGTGTTAGCGT+TGG | - | chr6.2:77374684-77374703 | MS.gene05213:intron | 35.0% | |
TTACGCGAATTGATTAGACA+GGG | - | chr6.2:77377258-77377277 | MS.gene05213:CDS | 35.0% | |
TTCCAACCATAATTGCACAA+TGG | + | chr6.2:77377018-77377037 | None:intergenic | 35.0% | |
TTGTTTGCCATTCCCTAATA+AGG | + | chr6.2:77379362-77379381 | None:intergenic | 35.0% | |
TTTACGCGAATTGATTAGAC+AGG | - | chr6.2:77377257-77377276 | MS.gene05213:CDS | 35.0% | |
TTTGTAGTTGAAATGAGAGG+TGG | + | chr6.2:77376730-77376749 | None:intergenic | 35.0% | |
! | AACCCTGAGAATGCTTTTAA+TGG | - | chr6.2:77377123-77377142 | MS.gene05213:CDS | 35.0% |
! | ACGTCTTTAATCTGAAGTGT+CGG | - | chr6.2:77374563-77374582 | MS.gene05213:intron | 35.0% |
! | CTCATTGTGTGCTATTAATC+GGG | - | chr6.2:77378232-77378251 | MS.gene05213:CDS | 35.0% |
! | CTTATAGCCTAATCTTTTCC+TGG | + | chr6.2:77376697-77376716 | None:intergenic | 35.0% |
! | GTCTTCGTTCAACATTTTCA+GGG | + | chr6.2:77377221-77377240 | None:intergenic | 35.0% |
! | TCATTGTGTGCTATTAATCG+GGG | - | chr6.2:77378233-77378252 | MS.gene05213:CDS | 35.0% |
! | TCTTCGTTCAACATTTTCAG+GGG | + | chr6.2:77377220-77377239 | None:intergenic | 35.0% |
! | TTATTATGCAGTTTTTGCGC+CGG | - | chr6.2:77379235-77379254 | MS.gene05213:intron | 35.0% |
! | TTCCTTTTCACCTTAACAGA+TGG | + | chr6.2:77378952-77378971 | None:intergenic | 35.0% |
!! | ACACCATTAAAAGCATTCTC+AGG | + | chr6.2:77377129-77377148 | None:intergenic | 35.0% |
!! | ACAGTGGATTTTCAACAATG+CGG | + | chr6.2:77374202-77374221 | None:intergenic | 35.0% |
!! | CACCATTAAAAGCATTCTCA+GGG | + | chr6.2:77377128-77377147 | None:intergenic | 35.0% |
!!! | AGTGTCATTTTTGCAAGAGA+TGG | + | chr6.2:77376292-77376311 | None:intergenic | 35.0% |
!!! | TCAACATTTTCAGGGGTATT+TGG | + | chr6.2:77377213-77377232 | None:intergenic | 35.0% |
!!! | TGGCAGCTTGATTGTTATTT+TGG | - | chr6.2:77379728-77379747 | MS.gene05213:intron | 35.0% |
AACAATCAAAGCTGAAGCTC+TGG | - | chr6.2:77379377-77379396 | MS.gene05213:intron | 40.0% | |
AACCTTAGCACTCATCACAA+TGG | - | chr6.2:77378970-77378989 | MS.gene05213:intron | 40.0% | |
AAGTTGTTGGGAATGAACCT+GGG | - | chr6.2:77379081-77379100 | MS.gene05213:intron | 40.0% | |
AATCTTCCCTTCGTATTCCT+TGG | - | chr6.2:77375827-77375846 | MS.gene05213:intron | 40.0% | |
AATGACACTCTTATCTCAGG+TGG | - | chr6.2:77376303-77376322 | MS.gene05213:intron | 40.0% | |
AATTCCGGTTTCGTGTTATC+AGG | - | chr6.2:77374238-77374257 | MS.gene05213:CDS | 40.0% | |
ACAATCAAAGCTGAAGCTCT+GGG | - | chr6.2:77379378-77379397 | MS.gene05213:intron | 40.0% | |
ACACCAACTCCTTCATAACA+TGG | + | chr6.2:77375428-77375447 | None:intergenic | 40.0% | |
ACCAACTCCTTCATAACATG+GGG | + | chr6.2:77375426-77375445 | None:intergenic | 40.0% | |
ACTAGCTGAGGTAAGACATA+TGG | - | chr6.2:77376095-77376114 | MS.gene05213:intron | 40.0% | |
AGAAATATATGAGGAGAGCG+TGG | - | chr6.2:77375239-77375258 | MS.gene05213:CDS | 40.0% | |
AGAGCTGACATTCTATCAGA+TGG | - | chr6.2:77380175-77380194 | MS.gene05213:intron | 40.0% | |
AGCAGCAGCTCCAATAATTA+AGG | + | chr6.2:77377803-77377822 | None:intergenic | 40.0% | |
AGCCATCTGTTAAGGTGAAA+AGG | - | chr6.2:77378947-77378966 | MS.gene05213:intron | 40.0% | |
ATACCAGTCCAAGAAGGAAT+AGG | + | chr6.2:77377764-77377783 | None:intergenic | 40.0% | |
ATACGAAGGGAAGATTTAGG+GGG | + | chr6.2:77375823-77375842 | None:intergenic | 40.0% | |
ATCACCTGATAACACGAAAC+CGG | + | chr6.2:77374245-77374264 | None:intergenic | 40.0% | |
ATGACACTCTTATCTCAGGT+GGG | - | chr6.2:77376304-77376323 | MS.gene05213:intron | 40.0% | |
ATTAATAGGGGAGGATGATG+AGG | + | chr6.2:77379301-77379320 | None:intergenic | 40.0% | |
ATTCGTCAAGGACTTCAGTT+AGG | + | chr6.2:77379425-77379444 | None:intergenic | 40.0% | |
CAATCAAGCTGCCAATGAAA+CGG | + | chr6.2:77379722-77379741 | None:intergenic | 40.0% | |
CACCAACTCCTTCATAACAT+GGG | + | chr6.2:77375427-77375446 | None:intergenic | 40.0% | |
CAGAAACCCTTATTAGGGAA+TGG | - | chr6.2:77379352-77379371 | MS.gene05213:intron | 40.0% | |
CAGTTAGGCCATTTACTTCA+TGG | + | chr6.2:77379410-77379429 | None:intergenic | 40.0% | |
CCATATCGGTATGTTATGCA+TGG | - | chr6.2:77377097-77377116 | MS.gene05213:CDS | 40.0% | |
CCATGCATAACATACCGATA+TGG | + | chr6.2:77377100-77377119 | None:intergenic | 40.0% | |
CCCCTATTAATGTGTATAGG+AGG | - | chr6.2:77379310-77379329 | MS.gene05213:intron | 40.0% | |
CCTATACACATTAATAGGGG+AGG | + | chr6.2:77379310-77379329 | None:intergenic | 40.0% | |
CCTCCCCTATTAATGTGTAT+AGG | - | chr6.2:77379307-77379326 | MS.gene05213:intron | 40.0% | |
CTCCCACACAAAGTAACATT+TGG | - | chr6.2:77379958-77379977 | MS.gene05213:intron | 40.0% | |
CTCGCAGAAAATTGGAAAGT+TGG | + | chr6.2:77377890-77377909 | None:intergenic | 40.0% | |
CTGATAGAATGTCAGCTCTA+AGG | + | chr6.2:77380174-77380193 | None:intergenic | 40.0% | |
CTGTAGGCCCTACATATATT+AGG | - | chr6.2:77379181-77379200 | MS.gene05213:intron | 40.0% | |
GAAAATGTTGAACGAAGACG+AGG | - | chr6.2:77377222-77377241 | MS.gene05213:CDS | 40.0% | |
GAAATCGACGGTTGAAATTC+CGG | - | chr6.2:77374223-77374242 | MS.gene05213:CDS | 40.0% | |
GAAGAACTCATATATGAGCG+AGG | + | chr6.2:77378832-77378851 | None:intergenic | 40.0% | |
GAGATTTATGCTAGACCACT+CGG | - | chr6.2:77375492-77375511 | MS.gene05213:CDS | 40.0% | |
GATTCTCCAATCTGAACAGA+AGG | + | chr6.2:77375991-77376010 | None:intergenic | 40.0% | |
GCACTCATCACAATGGAATT+TGG | - | chr6.2:77378977-77378996 | MS.gene05213:intron | 40.0% | |
GCATGGAATTGAATGTTGGA+AGG | - | chr6.2:77374847-77374866 | MS.gene05213:intron | 40.0% | |
GCTGTAATGATGAGATTGTC+AGG | - | chr6.2:77374900-77374919 | MS.gene05213:intron | 40.0% | |
GGAATACGAAGGGAAGATTT+AGG | + | chr6.2:77375826-77375845 | None:intergenic | 40.0% | |
GGAGAACAACCTTTAGTATC+TGG | + | chr6.2:77378593-77378612 | None:intergenic | 40.0% | |
GGTCAAGACTAAAAAATGGG+AGG | + | chr6.2:77378195-77378214 | None:intergenic | 40.0% | |
GTGATGTTATTCTTGAACGG+AGG | - | chr6.2:77374144-77374163 | MS.gene05213:intron | 40.0% | |
TAAAGGTTGTTCTCCAGCTT+TGG | - | chr6.2:77378598-77378617 | MS.gene05213:intron | 40.0% | |
TAAGTTGTTGGGAATGAACC+TGG | - | chr6.2:77379080-77379099 | MS.gene05213:intron | 40.0% | |
TACTTTGCAGGATCTTCTGA+TGG | - | chr6.2:77375738-77375757 | MS.gene05213:CDS | 40.0% | |
TCATAGTGAGCCATCTGTTA+AGG | - | chr6.2:77378939-77378958 | MS.gene05213:CDS | 40.0% | |
TCATCTGCTAACTACACTGT+AGG | - | chr6.2:77379165-77379184 | MS.gene05213:intron | 40.0% | |
TCTGTTGGCAACAAACTGAA+GGG | - | chr6.2:77379210-77379229 | MS.gene05213:intron | 40.0% | |
TTACAGATGTTCATCTCTGC+AGG | - | chr6.2:77378675-77378694 | MS.gene05213:CDS | 40.0% | |
TTACCTCTGACCCTAAACAT+AGG | - | chr6.2:77376374-77376393 | MS.gene05213:intron | 40.0% | |
TTAGTGGTGACATCTATACC+TGG | + | chr6.2:77375640-77375659 | None:intergenic | 40.0% | |
TTCAGCTGTAAACCCATCAT+TGG | - | chr6.2:77378047-77378066 | MS.gene05213:intron | 40.0% | |
TTCCAGCAAGCAAAAAGAGT+TGG | - | chr6.2:77377500-77377519 | MS.gene05213:intron | 40.0% | |
TTCCATTGTGATGAGTGCTA+AGG | + | chr6.2:77378975-77378994 | None:intergenic | 40.0% | |
TTCTGTTGGCAACAAACTGA+AGG | - | chr6.2:77379209-77379228 | MS.gene05213:intron | 40.0% | |
TTGAAGGGGACCCATAAAAA+GGG | + | chr6.2:77376423-77376442 | None:intergenic | 40.0% | |
TTTACAGCTCATATGGCACT+TGG | - | chr6.2:77377474-77377493 | MS.gene05213:intron | 40.0% | |
TTTGAAGGGGACCCATAAAA+AGG | + | chr6.2:77376424-77376443 | None:intergenic | 40.0% | |
! | ACGTGGGTTGTAAATGCTTA+GGG | - | chr6.2:77378123-77378142 | MS.gene05213:intron | 40.0% |
! | AGAGATAGAAGCCCTTTTAG+AGG | - | chr6.2:77380216-77380235 | MS.gene05213:intron | 40.0% |
! | AGGATCTTCTGATGGATGTT+AGG | - | chr6.2:77375746-77375765 | MS.gene05213:CDS | 40.0% |
! | AGTCCAAGAAGTACAAGTGT+GGG | + | chr6.2:77379139-77379158 | None:intergenic | 40.0% |
! | CATGTTGACTATGCATCACA+TGG | - | chr6.2:77380042-77380061 | MS.gene05213:intron | 40.0% |
! | CCCAAGACTGAATTACGTTT+TGG | + | chr6.2:77378009-77378028 | None:intergenic | 40.0% |
! | CGGTTCATTTTGCAGCTTAT+TGG | - | chr6.2:77375512-77375531 | MS.gene05213:CDS | 40.0% |
! | CGTCTTCGTTCAACATTTTC+AGG | + | chr6.2:77377222-77377241 | None:intergenic | 40.0% |
! | GACGGATGTAGTATTTTACC+AGG | - | chr6.2:77376676-77376695 | MS.gene05213:intron | 40.0% |
! | GCATTTTGCCTATTCCTTCT+TGG | - | chr6.2:77377753-77377772 | MS.gene05213:intron | 40.0% |
! | GGATCTTCTGATGGATGTTA+GGG | - | chr6.2:77375747-77375766 | MS.gene05213:CDS | 40.0% |
! | TACCAACTCTTTTTGCTTGC+TGG | + | chr6.2:77377505-77377524 | None:intergenic | 40.0% |
! | TTCAGCTGCTTCCTCTAAAA+GGG | + | chr6.2:77380230-77380249 | None:intergenic | 40.0% |
! | TTTGTGTTAGTTCTCACGCT+GGG | - | chr6.2:77374117-77374136 | MS.gene05213:intron | 40.0% |
!! | CTAAAGTGTTGGTGCTACAT+AGG | - | chr6.2:77374966-77374985 | MS.gene05213:intron | 40.0% |
!! | TTTGTTTTCCTTCAGGACGT+GGG | - | chr6.2:77378107-77378126 | MS.gene05213:intron | 40.0% |
!! | TTTTGTGTTAGTTCTCACGC+TGG | - | chr6.2:77374116-77374135 | MS.gene05213:intron | 40.0% |
!!! | GTTTTTTGCTGAACTTTGGC+AGG | - | chr6.2:77378532-77378551 | MS.gene05213:intron | 40.0% |
!!! | TTTTGTTTTCCTTCAGGACG+TGG | - | chr6.2:77378106-77378125 | MS.gene05213:intron | 40.0% |
AAGCCCACACTTGTACTTCT+TGG | - | chr6.2:77379133-77379152 | MS.gene05213:intron | 45.0% | |
AAGCTGCAAAATGAACCGAG+TGG | + | chr6.2:77375510-77375529 | None:intergenic | 45.0% | |
ACAGAACCAGATGAGGATAG+AGG | + | chr6.2:77378787-77378806 | None:intergenic | 45.0% | |
ACCAAGACCAAGGAATACGA+AGG | + | chr6.2:77375837-77375856 | None:intergenic | 45.0% | |
ACGTAATTCAGTCTTGGGGA+AGG | - | chr6.2:77378011-77378030 | MS.gene05213:intron | 45.0% | |
AGACCTCACTAACACGAGTA+CGG | + | chr6.2:77374731-77374750 | None:intergenic | 45.0% | |
AGAGGCCTGTGACATATAGT+AGG | + | chr6.2:77378769-77378788 | None:intergenic | 45.0% | |
AGAGTATGCTGGTAACCTGA+AGG | - | chr6.2:77375789-77375808 | MS.gene05213:intron | 45.0% | |
AGGCCATTTACTTCATGGCT+AGG | + | chr6.2:77379405-77379424 | None:intergenic | 45.0% | |
AGTCTTGGGGAAGGCAATAA+TGG | - | chr6.2:77378020-77378039 | MS.gene05213:intron | 45.0% | |
AGTGAACCCTGCAAATCAGT+AGG | + | chr6.2:77378889-77378908 | None:intergenic | 45.0% | |
AGTTAGAACCATTCTTGCCC+AGG | + | chr6.2:77379101-77379120 | None:intergenic | 45.0% | |
ATCACAGCTAAGCTATCCCA+AGG | + | chr6.2:77377381-77377400 | None:intergenic | 45.0% | |
ATCACGAAAGCTCCGTTTCT+AGG | - | chr6.2:77374050-77374069 | MS.gene05213:CDS | 45.0% | |
ATGATGAGATTGTCAGGGTC+AGG | - | chr6.2:77374906-77374925 | MS.gene05213:intron | 45.0% | |
ATTTACAACCCACGTCCTGA+AGG | + | chr6.2:77378118-77378137 | None:intergenic | 45.0% | |
CAATCAAAGCTGAAGCTCTG+GGG | - | chr6.2:77379379-77379398 | MS.gene05213:intron | 45.0% | |
CCAACTGTACCTCTTGAAGA+AGG | + | chr6.2:77375876-77375895 | None:intergenic | 45.0% | |
CCAAGACCAAGGAATACGAA+GGG | + | chr6.2:77375836-77375855 | None:intergenic | 45.0% | |
CTATTTGAGCCAGAGTATGC+TGG | - | chr6.2:77375778-77375797 | MS.gene05213:intron | 45.0% | |
CTTCACTCGTGCTCAAGTAT+TGG | - | chr6.2:77379008-77379027 | MS.gene05213:intron | 45.0% | |
GAACGGAGGAAGTTGAAATC+TGG | - | chr6.2:77374158-77374177 | MS.gene05213:intron | 45.0% | |
GACAGCAAACCCCAAATTTG+AGG | + | chr6.2:77378854-77378873 | None:intergenic | 45.0% | |
GAGCAAGCATAGATTCGTCA+AGG | + | chr6.2:77379437-77379456 | None:intergenic | 45.0% | |
GCATACGGTGTTCCATGATA+AGG | + | chr6.2:77376920-77376939 | None:intergenic | 45.0% | |
GCTGAGGTAAGACATATGGA+CGG | - | chr6.2:77376099-77376118 | MS.gene05213:intron | 45.0% | |
GTCATGTCTAGTGTCTGTGT+CGG | + | chr6.2:77374446-77374465 | None:intergenic | 45.0% | |
GTGATAATACACGAGAGAGG+AGG | + | chr6.2:77377074-77377093 | None:intergenic | 45.0% | |
GTTCAGCTGCTTCCTCTAAA+AGG | + | chr6.2:77380231-77380250 | None:intergenic | 45.0% | |
GTTGTGAAGAGGCAAGATGA+TGG | - | chr6.2:77380431-77380450 | MS.gene05213:CDS | 45.0% | |
TAAGACATATGGACGGAGGT+TGG | - | chr6.2:77376106-77376125 | MS.gene05213:intron | 45.0% | |
TCAAAGCTTGTGCTGGACAT+TGG | - | chr6.2:77376009-77376028 | MS.gene05213:intron | 45.0% | |
TCATCTTTCTCAGCTCGATC+AGG | + | chr6.2:77375542-77375561 | None:intergenic | 45.0% | |
TCCCCATGTTATGAAGGAGT+TGG | - | chr6.2:77375422-77375441 | MS.gene05213:CDS | 45.0% | |
TCGTTCTACAGAACCAGATG+AGG | + | chr6.2:77378794-77378813 | None:intergenic | 45.0% | |
TCTTTCTATGGCACTAGCTG+AGG | - | chr6.2:77376083-77376102 | MS.gene05213:intron | 45.0% | |
TCTTTGACAGTGGCAAGCTT+TGG | - | chr6.2:77380090-77380109 | MS.gene05213:intron | 45.0% | |
TGAAGCTTCATGCCAAGTAC+AGG | - | chr6.2:77377290-77377309 | MS.gene05213:CDS | 45.0% | |
TGACGAATCTATGCTTGCTC+AGG | - | chr6.2:77379437-77379456 | MS.gene05213:intron | 45.0% | |
TGCTCTATGCCTTCTTCAAG+AGG | - | chr6.2:77375864-77375883 | MS.gene05213:intron | 45.0% | |
TGGAGAATCAAAGCTTGTGC+TGG | - | chr6.2:77376002-77376021 | MS.gene05213:intron | 45.0% | |
TTGCCTATTCCTTCTTGGAC+TGG | - | chr6.2:77377758-77377777 | MS.gene05213:intron | 45.0% | |
! | CAGCATACTCTGGCTCAAAT+AGG | + | chr6.2:77375780-77375799 | None:intergenic | 45.0% |
! | CAGTCCAAGAAGTACAAGTG+TGG | + | chr6.2:77379140-77379159 | None:intergenic | 45.0% |
! | CCTTCTTCAAGAGGTACAGT+TGG | - | chr6.2:77375873-77375892 | MS.gene05213:CDS | 45.0% |
! | GAAACGGACTTGCATATAGC+TGG | + | chr6.2:77379706-77379725 | None:intergenic | 45.0% |
! | GACGTGGGTTGTAAATGCTT+AGG | - | chr6.2:77378122-77378141 | MS.gene05213:intron | 45.0% |
! | GAGAGCGTGGATAGAGATAA+AGG | - | chr6.2:77375252-77375271 | MS.gene05213:CDS | 45.0% |
! | GATCCTATGTTTAGGGTCAG+AGG | + | chr6.2:77376380-77376399 | None:intergenic | 45.0% |
! | TAGGGGGAATCTTTTCCTTC+AGG | + | chr6.2:77375807-77375826 | None:intergenic | 45.0% |
! | TTCAGGTTACCAGCATACTC+TGG | + | chr6.2:77375790-77375809 | None:intergenic | 45.0% |
! | TTGAAGAAGGCATAGAGCAC+CGG | + | chr6.2:77375863-77375882 | None:intergenic | 45.0% |
!! | AGAGGCAAGATGATGGATCA+TGG | - | chr6.2:77380438-77380457 | MS.gene05213:CDS | 45.0% |
!! | CTGACTCCTACTGATTTGCA+GGG | - | chr6.2:77378880-77378899 | MS.gene05213:CDS | 45.0% |
!! | GGGCAAGAATGGTTCTAACT+TGG | - | chr6.2:77379101-77379120 | MS.gene05213:intron | 45.0% |
!! | TCAACCGTCGATTTCAACAG+TGG | + | chr6.2:77374218-77374237 | None:intergenic | 45.0% |
!! | TTATCTTATTATAAAATAAA+GGG | + | chr6.2:77374819-77374838 | None:intergenic | 5.0% |
!! | TTTATCTTATTATAAAATAA+AGG | + | chr6.2:77374820-77374839 | None:intergenic | 5.0% |
AAGAAGGCCAGTCCTGTACT+TGG | + | chr6.2:77377305-77377324 | None:intergenic | 50.0% | |
AATCCAGGGCACAGAAGAAG+AGG | - | chr6.2:77377945-77377964 | MS.gene05213:intron | 50.0% | |
AGGGTTTCTGCTTCTTCCAC+AGG | + | chr6.2:77379342-77379361 | None:intergenic | 50.0% | |
AGGTACAGTTGGCACGTACT+TGG | - | chr6.2:77375884-77375903 | MS.gene05213:CDS | 50.0% | |
CATGGCGGCGAAATTCGTTA+TGG | - | chr6.2:77374077-77374096 | MS.gene05213:intron | 50.0% | |
CCCTTCGTATTCCTTGGTCT+TGG | - | chr6.2:77375833-77375852 | MS.gene05213:intron | 50.0% | |
CCGCCATGTGAACCTAGAAA+CGG | + | chr6.2:77374065-77374084 | None:intergenic | 50.0% | |
CGAGCAACGCTATACAGAGA+AGG | + | chr6.2:77374029-77374048 | None:intergenic | 50.0% | |
CGTTGGAGACTGACACATGT+TGG | - | chr6.2:77374701-77374720 | MS.gene05213:intron | 50.0% | |
CTGAACTTTGGCAGGAACTG+TGG | - | chr6.2:77378540-77378559 | MS.gene05213:intron | 50.0% | |
CTGGCTAATGCTGCAGTGAT+CGG | - | chr6.2:77374002-77374021 | MS.gene05213:CDS | 50.0% | |
CTTCATGCCAAGTACAGGAC+TGG | - | chr6.2:77377295-77377314 | MS.gene05213:CDS | 50.0% | |
GACCTCACTAACACGAGTAC+GGG | + | chr6.2:77374730-77374749 | None:intergenic | 50.0% | |
GAGGTAAGACATATGGACGG+AGG | - | chr6.2:77376102-77376121 | MS.gene05213:intron | 50.0% | |
GGAATGAACCTGGGCAAGAA+TGG | - | chr6.2:77379090-77379109 | MS.gene05213:intron | 50.0% | |
GGGCCTAGCCATGAAGTAAA+TGG | - | chr6.2:77379399-77379418 | MS.gene05213:intron | 50.0% | |
GTACTCGTGTTAGTGAGGTC+TGG | - | chr6.2:77374730-77374749 | MS.gene05213:intron | 50.0% | |
TACCCGTACTCGTGTTAGTG+AGG | - | chr6.2:77374725-77374744 | MS.gene05213:intron | 50.0% | |
TGAGAACATAGGGAACCGCT+AGG | + | chr6.2:77378216-77378235 | None:intergenic | 50.0% | |
TTGCAGGGTTCACTGCTATC+TGG | - | chr6.2:77378895-77378914 | MS.gene05213:CDS | 50.0% | |
! | CCGTTTCTAGGTTCACATGG+CGG | - | chr6.2:77374062-77374081 | MS.gene05213:intron | 50.0% |
! | GCTCCGTTTCTAGGTTCACA+TGG | - | chr6.2:77374059-77374078 | MS.gene05213:intron | 50.0% |
! | GTGTGCTATTAATCGGGGCA+TGG | - | chr6.2:77378238-77378257 | MS.gene05213:CDS | 50.0% |
! | TGAAGAAGGCATAGAGCACC+GGG | + | chr6.2:77375862-77375881 | None:intergenic | 50.0% |
!! | ATTCCTTGGTCTTGGTTGCC+CGG | - | chr6.2:77375841-77375860 | MS.gene05213:intron | 50.0% |
!! | GATGATGAGGTAAGAGCGCT+GGG | + | chr6.2:77379288-77379307 | None:intergenic | 50.0% |
!! | GCTGACTCCTACTGATTTGC+AGG | - | chr6.2:77378879-77378898 | MS.gene05213:CDS | 50.0% |
CACAGGCCTCTATCCTCATC+TGG | - | chr6.2:77378778-77378797 | MS.gene05213:intron | 55.0% | |
GGGAGGAAATGGCATCGCTA+AGG | + | chr6.2:77378178-77378197 | None:intergenic | 55.0% | |
GTATAGGAGGCTGATGCCTG+TGG | - | chr6.2:77379323-77379342 | MS.gene05213:intron | 55.0% | |
TGGCAAGCTCAGTAGCTCCA+AGG | + | chr6.2:77377193-77377212 | None:intergenic | 55.0% | |
TTGGCAGGAACTGTGGCTGA+AGG | - | chr6.2:77378547-77378566 | MS.gene05213:intron | 55.0% | |
! | GGATGATGAGGTAAGAGCGC+TGG | + | chr6.2:77379289-77379308 | None:intergenic | 55.0% |
!! | GAGCGCTGGGTAAACCACTT+CGG | + | chr6.2:77379275-77379294 | None:intergenic | 55.0% |
AGTAGCTCCAAGGTGCAGGC+GGG | + | chr6.2:77377183-77377202 | None:intergenic | 60.0% | |
CAGTAGCTCCAAGGTGCAGG+CGG | + | chr6.2:77377184-77377203 | None:intergenic | 60.0% | |
CCACTTCGGCTTCCAGCATC+TGG | + | chr6.2:77379261-77379280 | None:intergenic | 60.0% | |
CCAGATGCTGGAAGCCGAAG+TGG | - | chr6.2:77379258-77379277 | MS.gene05213:intron | 60.0% | |
CTGCCTCTTCTTCTGTGCCC+TGG | + | chr6.2:77377951-77377970 | None:intergenic | 60.0% | |
GCTCAGTAGCTCCAAGGTGC+AGG | + | chr6.2:77377187-77377206 | None:intergenic | 60.0% | |
TTCGGCTTCCAGCATCTGGC+CGG | + | chr6.2:77379257-77379276 | None:intergenic | 60.0% | |
!! | TTTTTGCGCCGGCCAGATGC+TGG | - | chr6.2:77379246-77379265 | MS.gene05213:intron | 60.0% |
GCACCGGGCAACCAAGACCA+AGG | + | chr6.2:77375847-77375866 | None:intergenic | 65.0% | |
! | GGGCGTTGTTGCATCTCGCC+AGG | - | chr6.2:77375619-77375638 | MS.gene05213:CDS | 65.0% |
GCTTGCTCCCGCCTGCACCT+TGG | - | chr6.2:77377173-77377192 | MS.gene05213:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 77373996 | 77380493 | 77373996 | ID=MS.gene05213 |
chr6.2 | mRNA | 77373996 | 77380493 | 77373996 | ID=MS.gene05213.t1;Parent=MS.gene05213 |
chr6.2 | exon | 77380230 | 77380493 | 77380230 | ID=MS.gene05213.t1.exon1;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77380230 | 77380493 | 77380230 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77378849 | 77378962 | 77378849 | ID=MS.gene05213.t1.exon2;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77378849 | 77378962 | 77378849 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77378604 | 77378741 | 77378604 | ID=MS.gene05213.t1.exon3;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77378604 | 77378741 | 77378604 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77378385 | 77378489 | 77378385 | ID=MS.gene05213.t1.exon4;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77378385 | 77378489 | 77378385 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77378168 | 77378290 | 77378168 | ID=MS.gene05213.t1.exon5;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77378168 | 77378290 | 77378168 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77376968 | 77377336 | 77376968 | ID=MS.gene05213.t1.exon6;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77376968 | 77377336 | 77376968 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77376710 | 77376805 | 77376710 | ID=MS.gene05213.t1.exon7;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77376710 | 77376805 | 77376710 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77376421 | 77376537 | 77376421 | ID=MS.gene05213.t1.exon8;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77376421 | 77376537 | 77376421 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77375870 | 77375935 | 77375870 | ID=MS.gene05213.t1.exon9;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77375870 | 77375935 | 77375870 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77375031 | 77375792 | 77375031 | ID=MS.gene05213.t1.exon10;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77375031 | 77375792 | 77375031 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77374199 | 77374389 | 77374199 | ID=MS.gene05213.t1.exon11;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77374199 | 77374389 | 77374199 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
chr6.2 | exon | 77373996 | 77374077 | 77373996 | ID=MS.gene05213.t1.exon12;Parent=MS.gene05213.t1 |
chr6.2 | CDS | 77373996 | 77374077 | 77373996 | ID=cds.MS.gene05213.t1;Parent=MS.gene05213.t1 |
Gene Sequence |
Protein sequence |