AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052154

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052154.t1 MTR_3g100310 99.363 471 3 0 1 471 47 517 0.0 979
MS.gene052154.t1 MTR_5g032100 73.605 466 123 0 6 471 38 503 0.0 735
MS.gene052154.t1 MTR_4g084570 38.126 459 249 11 21 471 118 549 3.08e-103 319
MS.gene052154.t1 MTR_2g016470 38.144 485 270 14 8 470 139 615 7.45e-101 315
MS.gene052154.t1 MTR_1g031590 37.473 459 252 11 21 471 117 548 5.94e-100 310
MS.gene052154.t1 MTR_3g086570 35.811 444 253 8 37 471 129 549 1.16e-97 304
MS.gene052154.t1 MTR_3g005340 38.210 458 231 12 30 470 123 545 6.96e-97 303
MS.gene052154.t1 MTR_3g099480 34.848 462 243 7 29 470 115 538 4.82e-95 297
MS.gene052154.t1 MTR_5g059260 40.141 426 218 10 56 469 159 559 6.18e-93 293
MS.gene052154.t1 MTR_5g064620 34.125 463 250 8 29 471 86 513 9.15e-91 286
MS.gene052154.t1 MTR_4g082310 37.011 435 225 9 48 469 91 489 8.27e-88 278
MS.gene052154.t1 MTR_2g059350 34.483 464 244 11 28 466 76 504 2.10e-84 269
MS.gene052154.t1 MTR_5g042200 36.425 442 229 11 44 469 72 477 3.49e-84 268
MS.gene052154.t1 MTR_4g110030 34.672 473 240 10 28 466 68 505 1.64e-83 267
MS.gene052154.t1 MTR_5g099010 36.188 467 252 14 7 470 77 500 2.58e-82 265
MS.gene052154.t1 MTR_4g132590 35.776 464 271 14 28 471 38 494 4.08e-82 262
MS.gene052154.t1 MTR_6g016015 35.664 429 228 10 53 468 114 507 4.27e-82 263
MS.gene052154.t1 MTR_4g132590 35.776 464 271 14 28 471 137 593 6.33e-81 262
MS.gene052154.t1 MTR_4g125460 34.490 461 247 12 26 471 60 480 1.68e-79 255
MS.gene052154.t1 MTR_3g096020 34.839 465 237 9 29 469 164 586 3.27e-78 255
MS.gene052154.t1 MTR_1g102030 34.542 469 252 14 20 471 54 484 5.56e-78 252
MS.gene052154.t1 MTR_4g125460 34.934 458 245 12 26 469 199 617 6.31e-78 255
MS.gene052154.t1 MTR_4g100810 35.915 426 232 12 48 469 101 489 9.83e-78 252
MS.gene052154.t1 MTR_3g115220 34.744 449 248 12 28 469 82 492 7.78e-77 251
MS.gene052154.t1 MTR_3g086570 39.009 323 167 7 37 352 129 428 1.37e-76 246
MS.gene052154.t1 MTR_4g019210 32.308 455 255 10 29 469 206 621 4.51e-73 243
MS.gene052154.t1 MTR_5g012770 35.831 427 222 13 47 469 116 494 8.97e-72 236
MS.gene052154.t1 MTR_5g081690 33.643 431 232 11 54 470 121 511 9.55e-71 234
MS.gene052154.t1 MTR_4g023030 33.857 446 242 10 37 469 211 616 2.14e-68 230
MS.gene052154.t1 MTR_3g026650 33.333 459 247 9 27 469 141 556 3.05e-68 228
MS.gene052154.t1 MTR_3g026650 32.995 394 198 7 27 402 141 486 1.31e-53 187
MS.gene052154.t1 MTR_4g010990 29.360 453 252 14 26 469 45 438 6.96e-49 174
MS.gene052154.t1 MTR_1g101990 34.628 309 168 8 168 471 1 280 4.09e-48 168
MS.gene052154.t1 MTR_4g010990 28.960 404 221 13 73 469 5 349 5.20e-39 145
MS.gene052154.t1 MTR_3g026650 30.945 307 146 7 27 315 141 399 1.25e-35 137
MS.gene052154.t1 MTR_3g092590 29.429 333 189 10 52 371 88 387 1.70e-33 133
MS.gene052154.t1 MTR_3g092590 29.429 333 189 10 52 371 88 387 4.89e-33 132
MS.gene052154.t1 MTR_7g017330 28.319 339 195 7 48 372 92 396 1.15e-29 122
MS.gene052154.t1 MTR_1g007390 29.236 301 167 10 82 369 124 391 7.49e-27 114
MS.gene052154.t1 MTR_7g064210 35.052 194 93 5 179 364 27 195 3.84e-25 107
MS.gene052154.t1 MTR_1g101985 45.545 101 54 1 29 128 62 162 2.96e-24 99.8
MS.gene052154.t1 MTR_2g038320 25.333 375 210 10 36 406 74 382 2.98e-23 102
MS.gene052154.t1 MTR_4g008200 25.064 391 221 14 21 406 4 327 6.23e-23 100
MS.gene052154.t1 MTR_4g008200 25.064 391 221 14 21 406 55 378 1.73e-22 99.8
MS.gene052154.t1 MTR_3g077710 55.072 69 12 1 259 327 4 53 9.72e-16 72.4
MS.gene052154.t1 MTR_8g017030 52.381 63 10 1 260 322 5 47 8.47e-13 64.3
MS.gene052154.t1 MTR_1g095680 40.217 92 43 2 195 286 16 95 2.87e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052154.t1 AT4G24530 75.745 470 114 0 1 470 48 517 0.0 759
MS.gene052154.t1 AT5G65470 73.461 471 121 2 1 469 34 502 0.0 732
MS.gene052154.t1 AT1G35510 38.612 461 242 10 21 470 127 557 1.09e-100 313
MS.gene052154.t1 AT3G26370 35.099 453 250 8 34 471 134 557 9.23e-98 305
MS.gene052154.t1 AT2G01480 37.174 460 250 13 21 470 122 552 2.27e-97 304
MS.gene052154.t1 AT1G14970 37.556 450 237 12 34 470 15 433 8.05e-95 294
MS.gene052154.t1 AT1G14970 36.402 478 258 14 7 470 108 553 3.92e-94 296
MS.gene052154.t1 AT1G38065 38.747 431 221 10 54 469 26 428 1.56e-93 291
MS.gene052154.t1 AT1G38065 38.747 431 221 10 54 469 36 438 1.92e-93 291
MS.gene052154.t1 AT1G29200 39.024 451 251 10 38 470 50 494 2.46e-93 291
MS.gene052154.t1 AT1G29200 39.024 451 251 10 38 470 50 494 2.46e-93 291
MS.gene052154.t1 AT1G14970 37.383 428 228 9 54 470 9 407 9.78e-93 287
MS.gene052154.t1 AT1G38131 38.747 431 221 10 54 469 155 557 4.71e-92 291
MS.gene052154.t1 AT1G29200 39.024 451 251 10 38 470 166 610 8.81e-92 291
MS.gene052154.t1 AT1G29200 39.100 422 237 9 63 470 5 420 6.66e-89 278
MS.gene052154.t1 AT1G62330 36.717 463 259 13 26 469 202 649 7.67e-88 282
MS.gene052154.t1 AT1G22460 33.333 462 250 7 29 470 135 558 7.85e-86 274
MS.gene052154.t1 AT2G01480 36.597 429 236 11 21 441 122 522 1.10e-85 273
MS.gene052154.t1 AT3G02250 34.542 469 243 12 29 468 65 498 4.55e-85 271
MS.gene052154.t1 AT4G38390 37.410 417 224 9 57 471 126 507 1.49e-84 270
MS.gene052154.t1 AT5G15740 33.902 469 246 12 29 468 65 498 4.37e-84 268
MS.gene052154.t1 AT1G20550 37.674 430 222 12 45 469 101 489 2.19e-83 268
MS.gene052154.t1 AT1G11990 35.957 470 270 12 28 471 148 612 2.69e-83 269
MS.gene052154.t1 AT1G11990 36.184 456 251 11 28 471 163 590 2.72e-83 268
MS.gene052154.t1 AT5G64600 35.118 467 237 9 27 469 90 514 8.76e-83 265
MS.gene052154.t1 AT1G14020 37.296 429 220 10 54 469 91 483 5.12e-82 262
MS.gene052154.t1 AT1G76270 36.830 429 225 12 46 469 99 486 5.14e-81 262
MS.gene052154.t1 AT1G04910 34.490 461 255 13 19 470 53 475 9.44e-81 259
MS.gene052154.t1 AT2G03280 37.529 429 218 11 54 468 88 480 1.73e-80 258
MS.gene052154.t1 AT2G37980 33.991 456 246 12 29 469 200 615 1.33e-78 257
MS.gene052154.t1 AT5G35570 32.563 476 270 10 7 469 203 640 5.38e-75 248
MS.gene052154.t1 AT3G54100 32.308 455 255 10 29 469 196 611 1.13e-74 247
MS.gene052154.t1 AT4G16650 35.924 476 256 16 1 470 72 504 1.73e-74 244
MS.gene052154.t1 AT4G16650 35.924 476 256 16 1 470 72 504 1.73e-74 244
MS.gene052154.t1 AT2G03280 35.307 456 218 12 54 468 88 507 1.96e-74 243
MS.gene052154.t1 AT2G44500 34.437 453 255 7 25 469 143 561 3.54e-72 239
MS.gene052154.t1 AT5G01100 31.510 457 258 10 29 469 191 608 6.30e-71 237
MS.gene052154.t1 AT3G07900 31.510 457 257 8 28 469 157 572 3.96e-68 228
MS.gene052154.t1 AT5G63390 32.314 458 264 8 23 470 128 549 2.68e-66 223
MS.gene052154.t1 AT3G26370 37.828 267 129 5 34 291 134 372 7.30e-60 201
MS.gene052154.t1 AT1G52630 27.938 451 259 15 27 470 45 436 4.90e-50 176
MS.gene052154.t1 AT1G52630 27.114 402 229 14 73 469 5 347 7.39e-40 147
MS.gene052154.t1 AT2G44500 32.770 296 160 5 25 315 143 404 2.39e-39 147
MS.gene052154.t1 AT3G03810 29.333 375 205 13 28 381 61 396 1.40e-36 143
MS.gene052154.t1 AT3G03810 29.333 375 205 13 28 381 61 396 1.40e-36 143
MS.gene052154.t1 AT3G30300 28.829 333 199 7 51 374 97 400 2.03e-31 128
MS.gene052154.t1 AT3G30300 28.829 333 199 7 51 374 97 400 2.03e-31 128
MS.gene052154.t1 AT3G21190 25.490 357 197 9 54 406 90 381 4.16e-21 95.9
MS.gene052154.t1 AT1G51630 24.930 357 199 9 54 406 91 382 7.25e-21 95.1

Find 107 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCCATTCAGCTTGTGATTT+TGG 0.068002 3.2:+83517538 MS.gene052154:CDS
CAGACCAAACATGGCACTTT+TGG 0.192496 3.2:+83518309 MS.gene052154:CDS
TTGCACTCACAAGGTGAATT+TGG 0.192542 3.2:-83514485 None:intergenic
GTTCCACACGTTAAGGAATT+AGG 0.206831 3.2:+83516708 MS.gene052154:CDS
GGATTGCTTCTAGCTGCTTT+GGG 0.237021 3.2:+83517694 MS.gene052154:CDS
TCAACTCTTCATCATTGAAT+TGG 0.253038 3.2:-83517633 None:intergenic
TTGCTGTTTCCCAAGCTTAT+CGG 0.280991 3.2:-83516808 None:intergenic
TGGATTGCTTCTAGCTGCTT+TGG 0.294168 3.2:+83517693 MS.gene052154:CDS
CATCTTCATTTCGGCTTCTC+CGG 0.300796 3.2:+83518086 MS.gene052154:CDS
CTAAATACCGGCAGGTGATT+TGG 0.320489 3.2:+83517590 MS.gene052154:CDS
CAACTCTTCATCATTGAATT+GGG 0.327093 3.2:-83517632 None:intergenic
GAGACAATGGCCAAAGTTAA+TGG 0.337935 3.2:+83518012 MS.gene052154:CDS
GCACAGCGACATCTTCATTT+CGG 0.365352 3.2:+83518077 MS.gene052154:CDS
AGAAGCAATCCAATCTCTTC+GGG 0.388321 3.2:-83517682 None:intergenic
AGCTTCCTGGTGAGTACTCT+TGG 0.391715 3.2:+83515296 MS.gene052154:CDS
GAACTTTGTTCCACACGTTA+AGG 0.393106 3.2:+83516701 MS.gene052154:CDS
CGGTACAAGGTTTCCATCCT+TGG 0.393966 3.2:-83514457 None:intergenic
TTTCAGCGTGCGGTTCTTGA+TGG 0.397111 3.2:+83518370 MS.gene052154:CDS
ACCAAAATCACAAGCTGAAT+GGG 0.400153 3.2:-83517539 None:intergenic
TGATGAAGAGTTGAGAAATC+AGG 0.404730 3.2:+83517642 MS.gene052154:CDS
GTATACAGAAAATGTATTGC+CGG 0.409053 3.2:+83515396 MS.gene052154:CDS
CGATGCCTTTCCATTAACTT+TGG 0.411811 3.2:-83518022 None:intergenic
CACCAAAATCACAAGCTGAA+TGG 0.427593 3.2:-83517540 None:intergenic
AGCGCTGCCCGAAAAGTCTC+GGG 0.432285 3.2:+83514606 MS.gene052154:intron
TAGAAGCAATCCAATCTCTT+CGG 0.438821 3.2:-83517683 None:intergenic
TACCTTGAATCTTGCCAGAC+AGG 0.439319 3.2:-83515118 None:intergenic
TTCACATACCTCTGAAGAAC+CGG 0.439622 3.2:-83515415 None:intergenic
ATCTTCATTTCGGCTTCTCC+GGG 0.439681 3.2:+83518087 MS.gene052154:CDS
CCAAGCTTATCGGCTTCCTC+TGG 0.444477 3.2:-83516798 None:intergenic
CATCCAGCGTCTCCGTTGTA+AGG 0.448928 3.2:+83516662 MS.gene052154:CDS
CCACTGACTCCCGAAGAGAT+TGG 0.458973 3.2:+83517673 MS.gene052154:CDS
AATGTGACGTGTCTAGGTTT+AGG 0.460189 3.2:-83514196 None:intergenic
CTCCCTTGGCTTACCAAGGA+TGG 0.461393 3.2:+83514444 MS.gene052154:CDS
TCTATAGTGAAAGAGCTTCC+TGG 0.462447 3.2:+83515283 MS.gene052154:CDS
GAATTTGGAGGCACGGTACA+AGG 0.465090 3.2:-83514470 None:intergenic
ATCCTGTCTGGCAAGATTCA+AGG 0.465671 3.2:+83515116 MS.gene052154:CDS
TGGCCCAAAAGTGCCATGTT+TGG 0.467421 3.2:-83518313 None:intergenic
AATAGTCATTTGATTCTGCT+TGG 0.470389 3.2:-83516773 None:intergenic
CAATCTGCGGTAGCATGAAC+TGG 0.471934 3.2:-83515373 None:intergenic
CCAGAGGAAGCCGATAAGCT+TGG 0.472576 3.2:+83516798 MS.gene052154:CDS
AGGTTTATGGTGGAAAAGCT+AGG 0.473316 3.2:+83517929 MS.gene052154:intron
CACTCACAAGGTGAATTTGG+AGG 0.474199 3.2:-83514482 None:intergenic
TGCTCTTATTCTGAAATAGC+TGG 0.476445 3.2:-83518333 None:intergenic
CTACACATGCAATCAGGAGC+AGG 0.479880 3.2:-83518454 None:intergenic
CAGCGCTGCCCGAAAAGTCT+CGG 0.480836 3.2:+83514605 MS.gene052154:intron
CAGAGGAAGCCGATAAGCTT+GGG 0.483277 3.2:+83516799 MS.gene052154:CDS
ATACCGGCAGGTGATTTGGC+AGG 0.495911 3.2:+83517594 MS.gene052154:CDS
GGATTGAACCAGCAGAAGAT+GGG 0.496714 3.2:+83514655 MS.gene052154:CDS
TCTCATCGCTTGACATTCAA+CGG 0.499133 3.2:+83516627 MS.gene052154:CDS
AGGATTGAACCAGCAGAAGA+TGG 0.499974 3.2:+83514654 MS.gene052154:CDS
TTATGGTGGAAAAGCTAGGT+TGG 0.500381 3.2:+83517933 MS.gene052154:CDS
AACCAATCTGTGGTCTCCCT+TGG 0.504923 3.2:+83514430 MS.gene052154:CDS
TGTAGCAATGTGACGTGTCT+AGG 0.506331 3.2:-83514202 None:intergenic
TAAGCTCTACACATGCAATC+AGG 0.507747 3.2:-83518460 None:intergenic
TAGACACGTCACATTGCTAC+AGG 0.507958 3.2:+83514204 MS.gene052154:CDS
GGGCAATATGCACAATGCTC+TGG 0.515544 3.2:+83518107 MS.gene052154:CDS
AGCTTGGGAAACAGCAAAGC+GGG 0.516102 3.2:+83516814 MS.gene052154:CDS
GGGACAGATAAGATTAAGAA+AGG 0.523765 3.2:+83518408 MS.gene052154:CDS
AGCTGGGCAATAAACCTTGT+GGG 0.537721 3.2:-83517749 None:intergenic
TGCTCTAGCTAAATACCGGC+AGG 0.538557 3.2:+83517582 MS.gene052154:CDS
AACTTGCTCTAGCTAAATAC+CGG 0.541940 3.2:+83517578 MS.gene052154:CDS
GATGAAGAGTTGAGAAATCA+GGG 0.542902 3.2:+83517643 MS.gene052154:CDS
TTCCCTGCCAAATCACCTGC+CGG 0.544202 3.2:-83517597 None:intergenic
GATTGCTTCTAGCTGCTTTG+GGG 0.545630 3.2:+83517695 MS.gene052154:CDS
TTTCCATCCTTGGTAAGCCA+AGG 0.550395 3.2:-83514447 None:intergenic
CCAATCTCTTCGGGAGTCAG+TGG 0.550645 3.2:-83517673 None:intergenic
AGCCAAGGGAGACCACAGAT+TGG 0.555485 3.2:-83514432 None:intergenic
TGGTCTCCCTTGGCTTACCA+AGG 0.559168 3.2:+83514440 MS.gene052154:CDS
AGAGCATTGTGCATATTGCC+CGG 0.559884 3.2:-83518105 None:intergenic
CAGGATTCACTTCAAAATGC+GGG 0.561562 3.2:-83515099 None:intergenic
GTGCTCCAAGAGTACTCACC+AGG 0.562409 3.2:-83515301 None:intergenic
CAGTTCATGCTACCGCAGAT+TGG 0.569656 3.2:+83515374 MS.gene052154:CDS
TGATGGACATAAGAACAGAC+AGG 0.569668 3.2:+83518387 MS.gene052154:CDS
TGACCTTACAACGGAGACGC+TGG 0.575199 3.2:-83516665 None:intergenic
TTCCATCCTTGGTAAGCCAA+GGG 0.578859 3.2:-83514446 None:intergenic
GCTGGTTCAATCCTCCATCA+AGG 0.585087 3.2:-83514645 None:intergenic
ATGTATTGCCGGTTCTTCAG+AGG 0.591620 3.2:+83515407 MS.gene052154:CDS
TCTAGTCTCTGCAGAGACAA+TGG 0.592187 3.2:+83517999 MS.gene052154:CDS
CGGAGACGCTGGATGTCTGA+TGG 0.599897 3.2:-83516654 None:intergenic
ACAAGAGAGTACTATGCCAC+AGG 0.599956 3.2:+83515322 MS.gene052154:CDS
TTCAGAATAAGAGCATAGGC+TGG 0.602241 3.2:+83518341 MS.gene052154:CDS
GAAGACTATCAGACCAAACA+TGG 0.603497 3.2:+83518300 MS.gene052154:CDS
GATTGAACCAGCAGAAGATG+GGG 0.605571 3.2:+83514656 MS.gene052154:CDS
TCTCCTAATTCCTTAACGTG+TGG 0.606004 3.2:-83516711 None:intergenic
AATGTCAAGCGATGAGAGAA+CGG 0.606541 3.2:-83516621 None:intergenic
TACCGGCAGGTGATTTGGCA+GGG 0.608982 3.2:+83517595 MS.gene052154:CDS
CTATTTCAGAATAAGAGCAT+AGG 0.610443 3.2:+83518337 MS.gene052154:CDS
CTGGTCAGAATTTCAGCGTG+CGG 0.613267 3.2:+83518360 MS.gene052154:CDS
GCGATGAGAGAACGGTGCAA+TGG 0.614616 3.2:-83516613 None:intergenic
TGTAGCGAAGACGCTGAACA+AGG 0.614908 3.2:-83516737 None:intergenic
ACTTTATCTTGCTTCCCACA+AGG 0.615688 3.2:+83517735 MS.gene052154:CDS
CAATCTCTTCGGGAGTCAGT+GGG 0.624514 3.2:-83517672 None:intergenic
AATGGCCAAAGTTAATGGAA+AGG 0.628911 3.2:+83518017 MS.gene052154:CDS
ACAAGGTGAATTTGGAGGCA+CGG 0.632017 3.2:-83514477 None:intergenic
TTGAAGTACAAACCAATCTG+TGG 0.642304 3.2:+83514420 MS.gene052154:CDS
TACACATGCAATCAGGAGCA+GGG 0.643795 3.2:-83518453 None:intergenic
ACAGGATTCACTTCAAAATG+CGG 0.644514 3.2:-83515100 None:intergenic
TCTAGTAGCTCTAATGCCTG+TGG 0.656159 3.2:-83515338 None:intergenic
TCACTATAGATACTTCGTCA+CGG 0.662049 3.2:-83515270 None:intergenic
ATCAAATGACTATTTGCCAG+AGG 0.666329 3.2:+83516782 MS.gene052154:CDS
AGACACGTCACATTGCTACA+GGG 0.677204 3.2:+83514205 MS.gene052154:CDS
GCGCTGCCCGAAAAGTCTCG+GGG 0.696935 3.2:+83514607 MS.gene052154:intron
CTTCAAAGTTGACCTTACAA+CGG 0.697428 3.2:-83516674 None:intergenic
ATTGAACCAGCAGAAGATGG+GGG 0.706327 3.2:+83514657 MS.gene052154:CDS
GATGGACATAAGAACAGACA+GGG 0.720717 3.2:+83518388 MS.gene052154:CDS
ATGAAGAGTTGAGAAATCAG+GGG 0.726296 3.2:+83517644 MS.gene052154:CDS
AAGCTTGGGAAACAGCAAAG+CGG 0.733658 3.2:+83516813 MS.gene052154:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAAATTGAAAAATTAT+TGG - chr3.2:83517075-83517094 None:intergenic 10.0%
!!! TAAATTGTCATTTATATAAT+TGG - chr3.2:83517454-83517473 None:intergenic 10.0%
!!! TTATTTTTCTATTAAAATTC+AGG + chr3.2:83514527-83514546 MS.gene052154:intron 10.0%
!! ATAAAAAATTGAAGACATAA+AGG - chr3.2:83515169-83515188 None:intergenic 15.0%
!! TAAAATTCTAAATATGCTTA+CGG + chr3.2:83516484-83516503 MS.gene052154:intron 15.0%
!! TCTAAGAAAGAAAAATTATT+TGG + chr3.2:83516137-83516156 MS.gene052154:intron 15.0%
!! TTTAGATAAAATAGAGTATA+AGG - chr3.2:83514851-83514870 None:intergenic 15.0%
!!! ATCTTTTAAATAGAAAATGT+GGG - chr3.2:83515031-83515050 None:intergenic 15.0%
!!! ATGTTTTTTTCAGAAAATTA+AGG + chr3.2:83517473-83517492 MS.gene052154:intron 15.0%
!!! TATCTTTTAAATAGAAAATG+TGG - chr3.2:83515032-83515051 None:intergenic 15.0%
!!! TATTATTTATATAGCTTGTT+TGG - chr3.2:83515898-83515917 None:intergenic 15.0%
!!! TATTTTCAGTTATTTTCTAT+AGG - chr3.2:83515818-83515837 None:intergenic 15.0%
!! AAAACCTACAAATTATATCA+TGG - chr3.2:83515563-83515582 None:intergenic 20.0%
!! AAAGGTAATTAATACTTCAT+TGG - chr3.2:83514814-83514833 None:intergenic 20.0%
!! AAATAACAACTCAGTATAAA+TGG - chr3.2:83515197-83515216 None:intergenic 20.0%
!! ACAGTTTAAGAAAAAATTCT+GGG + chr3.2:83515681-83515700 MS.gene052154:intron 20.0%
!! AGTTGTTAGATTGAAAAATA+TGG - chr3.2:83515991-83516010 None:intergenic 20.0%
!! ATTAAAATAACACATACGAT+CGG - chr3.2:83514318-83514337 None:intergenic 20.0%
!! ATTTATATAATTGGATCACA+AGG - chr3.2:83517445-83517464 None:intergenic 20.0%
!! TAATCCATTGGAAAAAAATA+AGG + chr3.2:83515656-83515675 MS.gene052154:intron 20.0%
!! TGATAACAAACAAAGAAAAT+AGG - chr3.2:83516068-83516087 None:intergenic 20.0%
!! TGATTAGAATATGTCTTTAA+AGG - chr3.2:83514990-83515009 None:intergenic 20.0%
!! TGTGATATTTATAAGAATGA+AGG - chr3.2:83516440-83516459 None:intergenic 20.0%
!! TTAGATTGAAAAATATGGAT+GGG - chr3.2:83515986-83516005 None:intergenic 20.0%
!!! ATTCTATGTTTTTAGGTTTA+TGG + chr3.2:83517916-83517935 MS.gene052154:intron 20.0%
!!! ATTTCCATGATATAATTTGT+AGG + chr3.2:83515556-83515575 MS.gene052154:intron 20.0%
!!! TAAAATTTTGAATGTAACGT+TGG + chr3.2:83515072-83515091 MS.gene052154:CDS 20.0%
!!! TAAATGAGATTGTTTTGAAA+GGG + chr3.2:83514684-83514703 MS.gene052154:intron 20.0%
!!! TATGTGCAATTTTTTGTTTT+AGG + chr3.2:83516225-83516244 MS.gene052154:intron 20.0%
!!! TCAACACATTTTCTATATAA+TGG - chr3.2:83515503-83515522 None:intergenic 20.0%
! AATCTACAACATTTGAAAAC+AGG - chr3.2:83516564-83516583 None:intergenic 25.0%
! AATTTCATTGCAGAAATGAA+GGG + chr3.2:83514710-83514729 MS.gene052154:intron 25.0%
! ATTATTGTCTCATAATCCAT+TGG + chr3.2:83515644-83515663 MS.gene052154:intron 25.0%
! CGTAAATAATGCATATCTAA+AGG - chr3.2:83516535-83516554 None:intergenic 25.0%
! CTATTTGAGTCAATAAACTA+TGG - chr3.2:83516095-83516114 None:intergenic 25.0%
! GACAGTTTAAGAAAAAATTC+TGG + chr3.2:83515680-83515699 MS.gene052154:intron 25.0%
! GATTATGAGACAATAATTGA+TGG - chr3.2:83515641-83515660 None:intergenic 25.0%
! GGGAAAAAAATTACAGTTTA+AGG + chr3.2:83515783-83515802 MS.gene052154:intron 25.0%
! GTTAGATTGAAAAATATGGA+TGG - chr3.2:83515987-83516006 None:intergenic 25.0%
! TAATTTCATTGCAGAAATGA+AGG + chr3.2:83514709-83514728 MS.gene052154:intron 25.0%
! TGTGATTACAGTATTATAAG+CGG + chr3.2:83516959-83516978 MS.gene052154:intron 25.0%
! TTTCTATTAACTGCAGTTTA+AGG + chr3.2:83517394-83517413 MS.gene052154:intron 25.0%
!! ATGTGTTTAAAATTTGAACG+AGG + chr3.2:83517295-83517314 MS.gene052154:intron 25.0%
!! ATTTTTCTTTCTTAGATCCT+AGG - chr3.2:83516133-83516152 None:intergenic 25.0%
!! CAAAAGATGTTTGGTTTAAA+CGG - chr3.2:83518245-83518264 None:intergenic 25.0%
!! CTTGTCTTTCTAATTTTACT+TGG + chr3.2:83516918-83516937 MS.gene052154:intron 25.0%
!! CTTTTCTTATCTTCCATAAA+AGG - chr3.2:83517979-83517998 None:intergenic 25.0%
!! TGGTTTAAACGGTAAATTTT+GGG - chr3.2:83518234-83518253 None:intergenic 25.0%
!! TTGGTTTAAACGGTAAATTT+TGG - chr3.2:83518235-83518254 None:intergenic 25.0%
!!! AAAATTATTTGGTTCTTCCA+AGG + chr3.2:83516148-83516167 MS.gene052154:intron 25.0%
!!! GTAAATGAGATTGTTTTGAA+AGG + chr3.2:83514683-83514702 MS.gene052154:intron 25.0%
!!! GTCTGTTTTAAATACCTTTT+AGG + chr3.2:83517204-83517223 MS.gene052154:intron 25.0%
!!! TATATTCAAGTTTTCCTTGA+TGG + chr3.2:83514631-83514650 MS.gene052154:CDS 25.0%
!!! TGGATTGATTCTATGTTTTT+AGG + chr3.2:83517909-83517928 MS.gene052154:intron 25.0%
!!! TGTTTTAATAACTCCACATA+TGG + chr3.2:83516368-83516387 MS.gene052154:intron 25.0%
AAAACCTAAATGCATTTCAG+GGG - chr3.2:83515479-83515498 None:intergenic 30.0%
AACTATGTAAATTCCAACCT+TGG - chr3.2:83516200-83516219 None:intergenic 30.0%
AAGGATATATCAGTGGAAAA+AGG - chr3.2:83514832-83514851 None:intergenic 30.0%
AATAGTCATTTGATTCTGCT+TGG - chr3.2:83516776-83516795 None:intergenic 30.0%
AATGCTTCCAATACAATTGA+CGG + chr3.2:83514343-83514362 MS.gene052154:intron 30.0%
ACATGACACTTAATATGAGA+CGG - chr3.2:83514757-83514776 None:intergenic 30.0%
ACTATGTAAATTCCAACCTT+GGG - chr3.2:83516199-83516218 None:intergenic 30.0%
AGAGTATAAGGATATATCAG+TGG - chr3.2:83514839-83514858 None:intergenic 30.0%
ATCATGGAAATCCATTGTAA+GGG - chr3.2:83515547-83515566 None:intergenic 30.0%
ATTCAAGGTATATCTAGTGT+GGG + chr3.2:83515131-83515150 MS.gene052154:intron 30.0%
CAAAACCTAAATGCATTTCA+GGG - chr3.2:83515480-83515499 None:intergenic 30.0%
CAACTCTTCATCATTGAATT+GGG - chr3.2:83517635-83517654 None:intergenic 30.0%
CTCATATTAAGTGTCATGTT+TGG + chr3.2:83514758-83514777 MS.gene052154:intron 30.0%
GCCAGGATTCAAAAAATTAT+GGG + chr3.2:83516892-83516911 MS.gene052154:intron 30.0%
GTATACAGAAAATGTATTGC+CGG + chr3.2:83515396-83515415 MS.gene052154:CDS 30.0%
GTTTAAGAAAAAATTCTGGG+TGG + chr3.2:83515684-83515703 MS.gene052154:intron 30.0%
TATAACCAGAACTCTACAAT+AGG - chr3.2:83517330-83517349 None:intergenic 30.0%
TATCATGGAAATCCATTGTA+AGG - chr3.2:83515548-83515567 None:intergenic 30.0%
TCAACTCTTCATCATTGAAT+TGG - chr3.2:83517636-83517655 None:intergenic 30.0%
TGCCAGGATTCAAAAAATTA+TGG + chr3.2:83516891-83516910 MS.gene052154:intron 30.0%
TTAAGGCTCCTGTTAATTAA+TGG + chr3.2:83517490-83517509 MS.gene052154:intron 30.0%
! ATTGACTCAAATAGTTGTCA+GGG + chr3.2:83516101-83516120 MS.gene052154:intron 30.0%
! ATTTTCTGTATACCAATCTG+CGG - chr3.2:83515389-83515408 None:intergenic 30.0%
! CTATTTCAGAATAAGAGCAT+AGG + chr3.2:83518337-83518356 MS.gene052154:CDS 30.0%
! GGTTTAAACGGTAAATTTTG+GGG - chr3.2:83518233-83518252 None:intergenic 30.0%
! TTTTCTCGTTGATACAGTTA+TGG + chr3.2:83516582-83516601 MS.gene052154:intron 30.0%
!! AAAAACAACACTGACTTGAT+TGG - chr3.2:83515762-83515781 None:intergenic 30.0%
!! AAGCACGTTATTTCCTTTTA+TGG + chr3.2:83517963-83517982 MS.gene052154:CDS 30.0%
!! GTTTACTTTTGAACTTAGTC+TGG + chr3.2:83517889-83517908 MS.gene052154:intron 30.0%
!! TAAGCGGAATATAGTTTGTT+AGG + chr3.2:83516975-83516994 MS.gene052154:intron 30.0%
!! TATTGACTCAAATAGTTGTC+AGG + chr3.2:83516100-83516119 MS.gene052154:intron 30.0%
!!! ACCCATAATTTTTTGAATCC+TGG - chr3.2:83516896-83516915 None:intergenic 30.0%
!!! ATCAAGTCAGTGTTGTTTTT+TGG + chr3.2:83515762-83515781 MS.gene052154:intron 30.0%
!!! CTATGTTTTTAGGTTTATGG+TGG + chr3.2:83517919-83517938 MS.gene052154:intron 30.0%
!!! GTCTCCTTATTTTTTTCCAA+TGG - chr3.2:83515663-83515682 None:intergenic 30.0%
!!! TCAAGTCAGTGTTGTTTTTT+GGG + chr3.2:83515763-83515782 MS.gene052154:intron 30.0%
AAAACTTCCCACATAATCCT+TGG - chr3.2:83516168-83516187 None:intergenic 35.0%
AAACCTAAATGCATTTCAGG+GGG - chr3.2:83515478-83515497 None:intergenic 35.0%
AACAACTCAGTATAAATGGC+TGG - chr3.2:83515193-83515212 None:intergenic 35.0%
AAGCTGTAGTTACACCTAAA+AGG - chr3.2:83517221-83517240 None:intergenic 35.0%
AATATATCCTGTCATGAGCT+GGG - chr3.2:83517768-83517787 None:intergenic 35.0%
AATGGCCAAAGTTAATGGAA+AGG + chr3.2:83518017-83518036 MS.gene052154:CDS 35.0%
ACAGGATTCACTTCAAAATG+CGG - chr3.2:83515103-83515122 None:intergenic 35.0%
ACCAAAATCACAAGCTGAAT+GGG - chr3.2:83517542-83517561 None:intergenic 35.0%
AGTGTAATGTACTCACAGTT+CGG - chr3.2:83514243-83514262 None:intergenic 35.0%
ATCAAATGACTATTTGCCAG+AGG + chr3.2:83516782-83516801 MS.gene052154:CDS 35.0%
ATCTAAAGGAAGACACTAAG+TGG - chr3.2:83516521-83516540 None:intergenic 35.0%
ATCTATTAAGACGATGCACT+AGG + chr3.2:83515716-83515735 MS.gene052154:intron 35.0%
ATGAAGAGTTGAGAAATCAG+GGG + chr3.2:83517644-83517663 MS.gene052154:CDS 35.0%
ATGACACTTAATATGAGACG+GGG - chr3.2:83514755-83514774 None:intergenic 35.0%
CACTGATGCTTCTACATAAA+AGG + chr3.2:83517173-83517192 MS.gene052154:intron 35.0%
CATGACACTTAATATGAGAC+GGG - chr3.2:83514756-83514775 None:intergenic 35.0%
CTGAAGATGCAAAAGATGTT+TGG - chr3.2:83518254-83518273 None:intergenic 35.0%
CTTCAAAGTTGACCTTACAA+CGG - chr3.2:83516677-83516696 None:intergenic 35.0%
GATGAAGAGTTGAGAAATCA+GGG + chr3.2:83517643-83517662 MS.gene052154:CDS 35.0%
GATTCAAGGTATATCTAGTG+TGG + chr3.2:83515130-83515149 MS.gene052154:intron 35.0%
GCAAAACCTAAATGCATTTC+AGG - chr3.2:83515481-83515500 None:intergenic 35.0%
GGGACAGATAAGATTAAGAA+AGG + chr3.2:83518408-83518427 MS.gene052154:CDS 35.0%
GTCAGTGACCATTAATTAAC+AGG - chr3.2:83517501-83517520 None:intergenic 35.0%
TACAGCACTACATTAGAACT+AGG - chr3.2:83516263-83516282 None:intergenic 35.0%
TAGAAGCAATCCAATCTCTT+CGG - chr3.2:83517686-83517705 None:intergenic 35.0%
TCACTATAGATACTTCGTCA+CGG - chr3.2:83515273-83515292 None:intergenic 35.0%
TGAGTGCAAATCTGCATAAT+TGG + chr3.2:83514499-83514518 MS.gene052154:intron 35.0%
TGATGAAGAGTTGAGAAATC+AGG + chr3.2:83517642-83517661 MS.gene052154:CDS 35.0%
TTGAAGTACAAACCAATCTG+TGG + chr3.2:83514420-83514439 MS.gene052154:CDS 35.0%
TTGACTCAAATAGTTGTCAG+GGG + chr3.2:83516102-83516121 MS.gene052154:intron 35.0%
TTGTACACCGTCAATTGTAT+TGG - chr3.2:83514353-83514372 None:intergenic 35.0%
! AACTTGCTCTAGCTAAATAC+CGG + chr3.2:83517578-83517597 MS.gene052154:CDS 35.0%
! AATATAACCCCGAGACTTTT+CGG - chr3.2:83514617-83514636 None:intergenic 35.0%
! ACAAAGGTATAATACTGTGC+TGG - chr3.2:83515927-83515946 None:intergenic 35.0%
! CAAACATCTTTTGCATCTTC+AGG + chr3.2:83518252-83518271 MS.gene052154:intron 35.0%
!! ATTCAAGTTTTCCTTGATGG+AGG + chr3.2:83514634-83514653 MS.gene052154:CDS 35.0%
!! ATTCAGCTTGTGATTTTGGT+GGG + chr3.2:83517542-83517561 MS.gene052154:CDS 35.0%
!! TGCTCTTATTCTGAAATAGC+TGG - chr3.2:83518336-83518355 None:intergenic 35.0%
!!! AGGACTGTTTTGTTTGTCAT+TGG + chr3.2:83514547-83514566 MS.gene052154:intron 35.0%
!!! ATTTTGAAGTGAATCCTGTC+TGG + chr3.2:83515104-83515123 MS.gene052154:CDS 35.0%
!!! CTTTTATGTAGAAGCATCAG+TGG - chr3.2:83517175-83517194 None:intergenic 35.0%
AACCAGAACTCTACAATAGG+AGG - chr3.2:83517327-83517346 None:intergenic 40.0%
AATGTCAAGCGATGAGAGAA+CGG - chr3.2:83516624-83516643 None:intergenic 40.0%
AATGTGACGTGTCTAGGTTT+AGG - chr3.2:83514199-83514218 None:intergenic 40.0%
ACCTTCCCTAAATACTGCAA+TGG - chr3.2:83516295-83516314 None:intergenic 40.0%
ACTTAACCTCAAATTCTGCC+AGG + chr3.2:83515440-83515459 MS.gene052154:intron 40.0%
ACTTTATCTTGCTTCCCACA+AGG + chr3.2:83517735-83517754 MS.gene052154:CDS 40.0%
AGAAGCAATCCAATCTCTTC+GGG - chr3.2:83517685-83517704 None:intergenic 40.0%
ATAAGAATGAAGGTGAGCCT+TGG - chr3.2:83516430-83516449 None:intergenic 40.0%
ATCCTCCTATTGTAGAGTTC+TGG + chr3.2:83517322-83517341 MS.gene052154:intron 40.0%
CAATATATCCTGTCATGAGC+TGG - chr3.2:83517769-83517788 None:intergenic 40.0%
CACCAAAATCACAAGCTGAA+TGG - chr3.2:83517543-83517562 None:intergenic 40.0%
CAGCGCTGCAATAATCAAAA+GGG - chr3.2:83514593-83514612 None:intergenic 40.0%
CAGGATTCACTTCAAAATGC+GGG - chr3.2:83515102-83515121 None:intergenic 40.0%
CGATGCCTTTCCATTAACTT+TGG - chr3.2:83518025-83518044 None:intergenic 40.0%
CTCTTAGTGAACTTCCAAGT+AGG + chr3.2:83516019-83516038 MS.gene052154:intron 40.0%
GAACTTTGTTCCACACGTTA+AGG + chr3.2:83516701-83516720 MS.gene052154:CDS 40.0%
GAAGACTATCAGACCAAACA+TGG + chr3.2:83518300-83518319 MS.gene052154:CDS 40.0%
GAGACAATGGCCAAAGTTAA+TGG + chr3.2:83518012-83518031 MS.gene052154:CDS 40.0%
GATGGACATAAGAACAGACA+GGG + chr3.2:83518388-83518407 MS.gene052154:CDS 40.0%
GCCTTCCATTGCAGTATTTA+GGG + chr3.2:83516287-83516306 MS.gene052154:intron 40.0%
GCTAATACATTCACACACAC+AGG - chr3.2:83517267-83517286 None:intergenic 40.0%
GGTTCTTCCAAGGATTATGT+GGG + chr3.2:83516158-83516177 MS.gene052154:intron 40.0%
GTTCCACACGTTAAGGAATT+AGG + chr3.2:83516708-83516727 MS.gene052154:CDS 40.0%
TAAGCTCTACACATGCAATC+AGG - chr3.2:83518463-83518482 None:intergenic 40.0%
TAGGTGTAACTACAGCTTGA+AGG + chr3.2:83517223-83517242 MS.gene052154:intron 40.0%
TATGCAGATTTGCACTCACA+AGG - chr3.2:83514497-83514516 None:intergenic 40.0%
TCCATTGCAGTATTTAGGGA+AGG + chr3.2:83516291-83516310 MS.gene052154:intron 40.0%
TCCCTAAATACTGCAATGGA+AGG - chr3.2:83516291-83516310 None:intergenic 40.0%
TCTATAGTGAAAGAGCTTCC+TGG + chr3.2:83515283-83515302 MS.gene052154:CDS 40.0%
TCTCATCGCTTGACATTCAA+CGG + chr3.2:83516627-83516646 MS.gene052154:CDS 40.0%
TCTCCTAATTCCTTAACGTG+TGG - chr3.2:83516714-83516733 None:intergenic 40.0%
TGCCTTCCATTGCAGTATTT+AGG + chr3.2:83516286-83516305 MS.gene052154:intron 40.0%
TGGTTCTTCCAAGGATTATG+TGG + chr3.2:83516157-83516176 MS.gene052154:intron 40.0%
TGTATTGCTGCAAGACATGT+AGG + chr3.2:83518203-83518222 MS.gene052154:intron 40.0%
TTAGGCAACAACTTGCATGT+TGG + chr3.2:83516993-83517012 MS.gene052154:intron 40.0%
TTGCACTCACAAGGTGAATT+TGG - chr3.2:83514488-83514507 None:intergenic 40.0%
TTGCAGTATTTAGGGAAGGT+TGG + chr3.2:83516295-83516314 MS.gene052154:intron 40.0%
TTTCCCCCTGAAATGCATTT+AGG + chr3.2:83515472-83515491 MS.gene052154:intron 40.0%
TTTGCAACTAGCCCTTACAA+TGG + chr3.2:83515533-83515552 MS.gene052154:intron 40.0%
! AACAGTCTTTTGCAGATGTG+AGG - chr3.2:83516352-83516371 None:intergenic 40.0%
! ACATCTTTTGCATCTTCAGG+TGG + chr3.2:83518255-83518274 MS.gene052154:intron 40.0%
! AGACCAAACATGGCACTTTT+GGG + chr3.2:83518310-83518329 MS.gene052154:CDS 40.0%
! AGGTTTATGGTGGAAAAGCT+AGG + chr3.2:83517929-83517948 MS.gene052154:intron 40.0%
! ATATAACCCCGAGACTTTTC+GGG - chr3.2:83514616-83514635 None:intergenic 40.0%
! CATTCAGCTTGTGATTTTGG+TGG + chr3.2:83517541-83517560 MS.gene052154:CDS 40.0%
! GTCTTCATTTGCATTTTGCC+AGG + chr3.2:83516875-83516894 MS.gene052154:intron 40.0%
! TGATGGACATAAGAACAGAC+AGG + chr3.2:83518387-83518406 MS.gene052154:CDS 40.0%
! TTATGGTGGAAAAGCTAGGT+TGG + chr3.2:83517933-83517952 MS.gene052154:CDS 40.0%
! TTCACATACCTCTGAAGAAC+CGG - chr3.2:83515418-83515437 None:intergenic 40.0%
! TTCAGAATAAGAGCATAGGC+TGG + chr3.2:83518341-83518360 MS.gene052154:CDS 40.0%
!! TTCAGCTTGTGATTTTGGTG+GGG + chr3.2:83517543-83517562 MS.gene052154:CDS 40.0%
!! TTGCTGTTTCCCAAGCTTAT+CGG - chr3.2:83516811-83516830 None:intergenic 40.0%
AAGCTTGGGAAACAGCAAAG+CGG + chr3.2:83516813-83516832 MS.gene052154:CDS 45.0%
AATATGGATGGGTGACGTGA+CGG - chr3.2:83515975-83515994 None:intergenic 45.0%
ACAAGGTGAATTTGGAGGCA+CGG - chr3.2:83514480-83514499 None:intergenic 45.0%
AGACACGTCACATTGCTACA+GGG + chr3.2:83514205-83514224 MS.gene052154:CDS 45.0%
AGCTGGGCAATAAACCTTGT+GGG - chr3.2:83517752-83517771 None:intergenic 45.0%
AGGATTGAACCAGCAGAAGA+TGG + chr3.2:83514654-83514673 MS.gene052154:CDS 45.0%
AGTTGTCAGGGGATATACCT+AGG + chr3.2:83516113-83516132 MS.gene052154:intron 45.0%
ATCCTGTCTGGCAAGATTCA+AGG + chr3.2:83515116-83515135 MS.gene052154:CDS 45.0%
ATCTTCATTTCGGCTTCTCC+GGG + chr3.2:83518087-83518106 MS.gene052154:CDS 45.0%
ATTGAACCAGCAGAAGATGG+GGG + chr3.2:83514657-83514676 MS.gene052154:CDS 45.0%
CACTCACAAGGTGAATTTGG+AGG - chr3.2:83514485-83514504 None:intergenic 45.0%
CATCTTCATTTCGGCTTCTC+CGG + chr3.2:83518086-83518105 MS.gene052154:CDS 45.0%
CTAAATACCGGCAGGTGATT+TGG + chr3.2:83517590-83517609 MS.gene052154:CDS 45.0%
GATTGAACCAGCAGAAGATG+GGG + chr3.2:83514656-83514675 MS.gene052154:CDS 45.0%
GCACAGCGACATCTTCATTT+CGG + chr3.2:83518077-83518096 MS.gene052154:CDS 45.0%
GCAGCGCTGCAATAATCAAA+AGG - chr3.2:83514594-83514613 None:intergenic 45.0%
GCATTTCAGGGGGAAAATGA+GGG - chr3.2:83515468-83515487 None:intergenic 45.0%
GGAAGACACTAAGTGGCTTA+TGG - chr3.2:83516514-83516533 None:intergenic 45.0%
GGATTGAACCAGCAGAAGAT+GGG + chr3.2:83514655-83514674 MS.gene052154:CDS 45.0%
TAATGGTCACTGACATGTGC+AGG + chr3.2:83517507-83517526 MS.gene052154:intron 45.0%
TACACATGCAATCAGGAGCA+GGG - chr3.2:83518456-83518475 None:intergenic 45.0%
TACCTTGAATCTTGCCAGAC+AGG - chr3.2:83515121-83515140 None:intergenic 45.0%
TAGACACGTCACATTGCTAC+AGG + chr3.2:83514204-83514223 MS.gene052154:CDS 45.0%
TAGTGAACTTCCAAGTAGGC+AGG + chr3.2:83516023-83516042 MS.gene052154:intron 45.0%
TCACTGACATGTGCAGGATA+TGG + chr3.2:83517513-83517532 MS.gene052154:intron 45.0%
TCTAGTCTCTGCAGAGACAA+TGG + chr3.2:83517999-83518018 MS.gene052154:CDS 45.0%
TGCATTTCAGGGGGAAAATG+AGG - chr3.2:83515469-83515488 None:intergenic 45.0%
TGTAGCAATGTGACGTGTCT+AGG - chr3.2:83514205-83514224 None:intergenic 45.0%
TTCCATCCTTGGTAAGCCAA+GGG - chr3.2:83514449-83514468 None:intergenic 45.0%
TTTATTGCCCAGCTCATGAC+AGG + chr3.2:83517758-83517777 MS.gene052154:intron 45.0%
TTTCCATCCTTGGTAAGCCA+AGG - chr3.2:83514450-83514469 None:intergenic 45.0%
! CAGACCAAACATGGCACTTT+TGG + chr3.2:83518309-83518328 MS.gene052154:CDS 45.0%
! GAAGTTTTCTCACAGTCCCA+AGG + chr3.2:83516180-83516199 MS.gene052154:intron 45.0%
! GATTGCTTCTAGCTGCTTTG+GGG + chr3.2:83517695-83517714 MS.gene052154:CDS 45.0%
! GCCCATTCAGCTTGTGATTT+TGG + chr3.2:83517538-83517557 MS.gene052154:CDS 45.0%
! GGATTGCTTCTAGCTGCTTT+GGG + chr3.2:83517694-83517713 MS.gene052154:CDS 45.0%
! TGGATTGCTTCTAGCTGCTT+TGG + chr3.2:83517693-83517712 MS.gene052154:CDS 45.0%
! TTTTCTCACAGTCCCAAGGT+TGG + chr3.2:83516184-83516203 MS.gene052154:intron 45.0%
!! ACAAAAAGTGCCTGCCTACT+TGG - chr3.2:83516036-83516055 None:intergenic 45.0%
!! ACAAGAGAGTACTATGCCAC+AGG + chr3.2:83515322-83515341 MS.gene052154:CDS 45.0%
!! AGAGCATTGTGCATATTGCC+CGG - chr3.2:83518108-83518127 None:intergenic 45.0%
!! ATGTATTGCCGGTTCTTCAG+AGG + chr3.2:83515407-83515426 MS.gene052154:CDS 45.0%
!! TCAGCTTGTGATTTTGGTGG+GGG + chr3.2:83517544-83517563 MS.gene052154:CDS 45.0%
!! TCTAGTAGCTCTAATGCCTG+TGG - chr3.2:83515341-83515360 None:intergenic 45.0%
AACCAATCTGTGGTCTCCCT+TGG + chr3.2:83514430-83514449 MS.gene052154:CDS 50.0%
AGCTTCCTGGTGAGTACTCT+TGG + chr3.2:83515296-83515315 MS.gene052154:CDS 50.0%
AGCTTGGGAAACAGCAAAGC+GGG + chr3.2:83516814-83516833 MS.gene052154:CDS 50.0%
AGGGAACCTGGCAGAATTTG+AGG - chr3.2:83515449-83515468 None:intergenic 50.0%
CAATCTCTTCGGGAGTCAGT+GGG - chr3.2:83517675-83517694 None:intergenic 50.0%
CAATCTGCGGTAGCATGAAC+TGG - chr3.2:83515376-83515395 None:intergenic 50.0%
CAGAGGAAGCCGATAAGCTT+GGG + chr3.2:83516799-83516818 MS.gene052154:CDS 50.0%
CAGTTCATGCTACCGCAGAT+TGG + chr3.2:83515374-83515393 MS.gene052154:CDS 50.0%
CATATGGCCTCCTGATCACA+CGG + chr3.2:83516384-83516403 MS.gene052154:intron 50.0%
CGGTACAAGGTTTCCATCCT+TGG - chr3.2:83514460-83514479 None:intergenic 50.0%
CTACACATGCAATCAGGAGC+AGG - chr3.2:83518457-83518476 None:intergenic 50.0%
CTGGTCAGAATTTCAGCGTG+CGG + chr3.2:83518360-83518379 MS.gene052154:CDS 50.0%
GAGCTGGGCAATAAACCTTG+TGG - chr3.2:83517753-83517772 None:intergenic 50.0%
GGGCAATATGCACAATGCTC+TGG + chr3.2:83518107-83518126 MS.gene052154:CDS 50.0%
TACTTACCCCCATCTTCTGC+TGG - chr3.2:83514666-83514685 None:intergenic 50.0%
TGCTCTAGCTAAATACCGGC+AGG + chr3.2:83517582-83517601 MS.gene052154:CDS 50.0%
TGTAGCGAAGACGCTGAACA+AGG - chr3.2:83516740-83516759 None:intergenic 50.0%
TGTGATCAGGAGGCCATATG+TGG - chr3.2:83516384-83516403 None:intergenic 50.0%
TTTCAGCGTGCGGTTCTTGA+TGG + chr3.2:83518370-83518389 MS.gene052154:CDS 50.0%
! GAATTTGGAGGCACGGTACA+AGG - chr3.2:83514473-83514492 None:intergenic 50.0%
! GCTGGTTCAATCCTCCATCA+AGG - chr3.2:83514648-83514667 None:intergenic 50.0%
!! TGGCCCAAAAGTGCCATGTT+TGG - chr3.2:83518316-83518335 None:intergenic 50.0%
ACAGACTGACAGGTGGCAAG+TGG - chr3.2:83515952-83515971 None:intergenic 55.0%
AGCCAAGGGAGACCACAGAT+TGG - chr3.2:83514435-83514454 None:intergenic 55.0%
AGGGGGAAAATGAGGGAACC+TGG - chr3.2:83515461-83515480 None:intergenic 55.0%
CAACTCCATTCATCGCGCCA+AGG + chr3.2:83516410-83516429 MS.gene052154:intron 55.0%
CAGGTGGCAAGTGGCAACAA+AGG - chr3.2:83515943-83515962 None:intergenic 55.0%
CATCCAGCGTCTCCGTTGTA+AGG + chr3.2:83516662-83516681 MS.gene052154:CDS 55.0%
CCAATCTCTTCGGGAGTCAG+TGG - chr3.2:83517676-83517695 None:intergenic 55.0%
CCAGAGGAAGCCGATAAGCT+TGG + chr3.2:83516798-83516817 MS.gene052154:CDS 55.0%
CTCCCTTGGCTTACCAAGGA+TGG + chr3.2:83514444-83514463 MS.gene052154:CDS 55.0%
GCGATGAGAGAACGGTGCAA+TGG - chr3.2:83516616-83516635 None:intergenic 55.0%
GGAGTTGCTACCGTGTGATC+AGG - chr3.2:83516397-83516416 None:intergenic 55.0%
GTTGCTACCGTGTGATCAGG+AGG - chr3.2:83516394-83516413 None:intergenic 55.0%
TGACCTTACAACGGAGACGC+TGG - chr3.2:83516668-83516687 None:intergenic 55.0%
TGGTCTCCCTTGGCTTACCA+AGG + chr3.2:83514440-83514459 MS.gene052154:CDS 55.0%
TTCCCTGCCAAATCACCTGC+CGG - chr3.2:83517600-83517619 None:intergenic 55.0%
! ATACCGGCAGGTGATTTGGC+AGG + chr3.2:83517594-83517613 MS.gene052154:CDS 55.0%
! TACCGGCAGGTGATTTGGCA+GGG + chr3.2:83517595-83517614 MS.gene052154:CDS 55.0%
!! CCAAGCTTATCGGCTTCCTC+TGG - chr3.2:83516801-83516820 None:intergenic 55.0%
!! CCACTGACTCCCGAAGAGAT+TGG + chr3.2:83517673-83517692 MS.gene052154:CDS 55.0%
!! GTGCTCCAAGAGTACTCACC+AGG - chr3.2:83515304-83515323 None:intergenic 55.0%
AGCGCTGCCCGAAAAGTCTC+GGG + chr3.2:83514606-83514625 MS.gene052154:intron 60.0%
CAGCGCTGCCCGAAAAGTCT+CGG + chr3.2:83514605-83514624 MS.gene052154:intron 60.0%
CGGAGACGCTGGATGTCTGA+TGG - chr3.2:83516657-83516676 None:intergenic 60.0%
GTGAGCCTTGGCGCGATGAA+TGG - chr3.2:83516418-83516437 None:intergenic 60.0%
!! GACGTGACGGACAGACTGAC+AGG - chr3.2:83515962-83515981 None:intergenic 60.0%
!! GTGACGGACAGACTGACAGG+TGG - chr3.2:83515959-83515978 None:intergenic 60.0%
GCGCTGCCCGAAAAGTCTCG+GGG + chr3.2:83514607-83514626 MS.gene052154:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 83514184 83518483 83514184 ID=MS.gene052154
chr3.2 mRNA 83514184 83518483 83514184 ID=MS.gene052154.t1;Parent=MS.gene052154
chr3.2 exon 83514184 83514246 83514184 ID=MS.gene052154.t1.exon1;Parent=MS.gene052154.t1
chr3.2 CDS 83514184 83514246 83514184 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83514416 83514497 83514416 ID=MS.gene052154.t1.exon2;Parent=MS.gene052154.t1
chr3.2 CDS 83514416 83514497 83514416 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83514608 83514678 83514608 ID=MS.gene052154.t1.exon3;Parent=MS.gene052154.t1
chr3.2 CDS 83514608 83514678 83514608 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83515049 83515137 83515049 ID=MS.gene052154.t1.exon4;Parent=MS.gene052154.t1
chr3.2 CDS 83515049 83515137 83515049 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83515225 83515428 83515225 ID=MS.gene052154.t1.exon5;Parent=MS.gene052154.t1
chr3.2 CDS 83515225 83515428 83515225 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83516599 83516869 83516599 ID=MS.gene052154.t1.exon6;Parent=MS.gene052154.t1
chr3.2 CDS 83516599 83516869 83516599 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83517529 83517756 83517529 ID=MS.gene052154.t1.exon7;Parent=MS.gene052154.t1
chr3.2 CDS 83517529 83517756 83517529 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83517931 83518128 83517931 ID=MS.gene052154.t1.exon8;Parent=MS.gene052154.t1
chr3.2 CDS 83517931 83518128 83517931 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
chr3.2 exon 83518274 83518483 83518274 ID=MS.gene052154.t1.exon9;Parent=MS.gene052154.t1
chr3.2 CDS 83518274 83518483 83518274 ID=cds.MS.gene052154.t1;Parent=MS.gene052154.t1
Gene Sequence

>MS.gene052154

GAATGGATTGCTCCTAAACCTAGACACGTCACATTGCTACAGGGTGCTCTACAACGCCGAACTGTGAGTACATTACACTTTTTCTGTTCATTCTTGAGTGTAAATTGTTTTACACTGTCAACAAATCACTACCGATCGTATGTGTTATTTTAATGATCTAATGCTTCCAATACAATTGACGGTGTACAAGTTTTCTACACAATTTTGTTACTTTTTTTGTTCTTGTTTTCAGTCTGTTGAAGTACAAACCAATCTGTGGTCTCCCTTGGCTTACCAAGGATGGAAACCTTGTACCGTGCCTCCAAATTCACCTTGTGAGTGCAAATCTGCATAATTGGATTATTTATTTTTCTATTAAAATTCAGGACTGTTTTGTTTGTCATTGGTTTTTGAATTTTTGTTTATTCCCTTTTGATTATTGCAGCGCTGCCCGAAAAGTCTCGGGGTTATATTCAAGTTTTCCTTGATGGAGGATTGAACCAGCAGAAGATGGGGGTAAGTAAATGAGATTGTTTTGAAAGGGTATAATTTCATTGCAGAAATGAAGGGTAAAAAAAAAACTGCTATGCCCCGTCTCATATTAAGTGTCATGTTTGGAATTTTTACTTGTCTCATAATTTTAAATTACCAATGAAGTATTAATTACCTTTTTCCACTGATATATCCTTATACTCTATTTTATCTAAACACATTTAACTACTCTACTACGTACTAACTACTATATTAATAAAATTACTTTAGCAAATGAAAATCATTTTATCATAGAGATTAGTACACTTAATGATTTTCTTAAGTGTGCACAACCTTTAAAGACATATTCTAATCACTATTCTAATATCAGTTTCCCACATTTTCTATTTAAAAGATATGTGATGCTGTTGCTGTTGCTAAAATTTTGAATGTAACGTTGGTGATCCCGCATTTTGAAGTGAATCCTGTCTGGCAAGATTCAAGGTATATCTAGTGTGGGATATTTTTGCAACCTTTATGTCTTCAATTTTTTATACCAGCCATTTATACTGAGTTGTTATTTTTCTGCAGTTCATTTGCAGATATATTTGACGTTGATCACTTCATTGATGTTCTCCGTGACGAAGTATCTATAGTGAAAGAGCTTCCTGGTGAGTACTCTTGGAGCACAAGAGAGTACTATGCCACAGGCATTAGAGCTACTAGAATTAAAACAGCGCCAGTTCATGCTACCGCAGATTGGTATACAGAAAATGTATTGCCGGTTCTTCAGAGGTATGTGAATAACTTAACCTCAAATTCTGCCAGGTTCCCTCATTTTCCCCCTGAAATGCATTTAGGTTTTGCCATTATATAGAAAATGTGTTGACTTAGAAGCTTTTGCAACTAGCCCTTACAATGGATTTCCATGATATAATTTGTAGGTTTTGATGCTCTGTATGTATAAAATTCAATATTGAGCACAGACAATTAATCTCAATTTACCATCAATTATTGTCTCATAATCCATTGGAAAAAAATAAGGAGACAGTTTAAGAAAAAATTCTGGGTGGATTTATGAAATCTATTAAGACGATGCACTAGGCTTAATGAAGATTTCTTGTACCAATCAAGTCAGTGTTGTTTTTTGGGAAAAAAATTACAGTTTAAGGCTTCACTTACCTATAGAAAATAACTGAAAATATTTAATTAGTAGAATTAATAGACTAGAGACTTAATCTATTCAAAGTATAAACAATTTCCAAACAAGCTATATAAATAATACTATTTCCAGCACAGTATTATACCTTTGTTGCCACTTGCCACCTGTCAGTCTGTCCGTCACGTCACCCATCCATATTTTTCAATCTAACAACTACTCAGTGCTCTTAGTGAACTTCCAAGTAGGCAGGCACTTTTTGTTGTCAAATGCCTATTTTCTTTGTTTGTTATCACTTGCCATAGTTTATTGACTCAAATAGTTGTCAGGGGATATACCTAGGATCTAAGAAAGAAAAATTATTTGGTTCTTCCAAGGATTATGTGGGAAGTTTTCTCACAGTCCCAAGGTTGGAATTTACATAGTTTGAGTTATGTGCAATTTTTTGTTTTAGGAACTGCTTTCTTCCTAGTTCTAATGTAGTGCTGTAAAGTGCCTTCCATTGCAGTATTTAGGGAAGGTTGGACTCATCGTGAATCTATTATAATCATTCTTACCTCACATCTGCAAAAGACTGTTTTAATAACTCCACATATGGCCTCCTGATCACACGGTAGCAACTCCATTCATCGCGCCAAGGCTCACCTTCATTCTTATAAATATCACACTGTAATTTATTCTTTGATGTATATAAAATTCTAAATATGCTTACGGAGTGCCATAAGCCACTTAGTGTCTTCCTTTAGATATGCATTATTTACGTAAATACCTGTTTTCAAATGTTGTAGATTTTCTCGTTGATACAGTTATGGTGTTGCTGCCATTGCACCGTTCTCTCATCGCTTGACATTCAACGGCTTACCATCAGACATCCAGCGTCTCCGTTGTAAGGTCAACTTTGAAGCACTGAACTTTGTTCCACACGTTAAGGAATTAGGAGATATCCTTGTTCAGCGTCTTCGCTACAATTCTAGTATCAACCAAGCAGAATCAAATGACTATTTGCCAGAGGAAGCCGATAAGCTTGGGAAACAGCAAAGCGGGAAGTTTGTTGTGTTGCATCTGCGTTTTGATAAAGTATAGTCTTCATTTGCATTTTGCCAGGATTCAAAAAATTATGGGTCACTTGTCTTTCTAATTTTACTTGGAAAGTCTTATTATTGCACTGTGATTACAGTATTATAAGCGGAATATAGTTTGTTAGGCAACAACTTGCATGTTGGTAGACTGACTGCTTCATATGTTTTAAGTAGAGTAATCAGTTCAAATATATTTAGCACCAATAATTTTTCAATTTTTGTTTCTGTAATTGTGTTTGCATGCGTGCTTGAATGATATGTTGATGATTTATGCTTCTGTTGTGAAGCAGCTAGTTGCTACCACTGATGCTTCTACATAAAAGGCATCTTGAGTCTGTTTTAAATACCTTTTAGGTGTAACTACAGCTTGAAGGAACTACGTATTTGTATTGCCTGTGTGTGTGAATGTATTAGCATTCTTGCATGTGTTTAAAATTTGAACGAGGATTTATCCTCCTATTGTAGAGTTCTGGTTATACACGCTTCTGCAGAACAAAAAAACTGATTCAGTTGTGAAGAATTTTTCTATTAACTGCAGTTTAAGGAACTGCACATTTCATCTTGAATTCTCCTTGTGATCCAATTATATAAATGACAATTTATGTTTTTTTCAGAAAATTAAGGCTCCTGTTAATTAATGGTCACTGACATGTGCAGGATATGGCAGCCCATTCAGCTTGTGATTTTGGTGGGGGTAAAGCTGAGAAACTTGCTCTAGCTAAATACCGGCAGGTGATTTGGCAGGGAAGAGTATTGAATTCCCAATTCAATGATGAAGAGTTGAGAAATCAGGGGCGTTGCCCACTGACTCCCGAAGAGATTGGATTGCTTCTAGCTGCTTTGGGGTTCAACAACAGAACACGACTTTATCTTGCTTCCCACAAGGTTTATTGCCCAGCTCATGACAGGATATATTGTTATTATGTAACAACAAAGATTAATTGCAATATTCATTGCAATATTAATTGATAAATAATCTAGTACAGTTTTTACATCTTTGTGCATTGTCATTTTATAGTTTACTTTTGAACTTAGTCTGGATTGATTCTATGTTTTTAGGTTTATGGTGGAAAAGCTAGGTTGGAAACTTTAAGCACGTTATTTCCTTTTATGGAAGATAAGAAAAGTCTAGTCTCTGCAGAGACAATGGCCAAAGTTAATGGAAAGGCATCGCTATTAGCTGCTGTTGATTATTATGTGAGCATGCACAGCGACATCTTCATTTCGGCTTCTCCGGGCAATATGCACAATGCTCTGGTAAGAGTCGTTGTTAAATATGTTTGAAACTTAACAACTGTGAAGAGTTACATCGCATAACTACTTATATGTTATGTATTGCTGCAAGACATGTAGGAAATCCCCAAAATTTACCGTTTAAACCAAACATCTTTTGCATCTTCAGGTGGCACATCGTGCTTATAAGAATCTGAAGACTATCAGACCAAACATGGCACTTTTGGGCCAGCTATTTCAGAATAAGAGCATAGGCTGGTCAGAATTTCAGCGTGCGGTTCTTGATGGACATAAGAACAGACAGGGACAGATAAGATTAAGAAAGGAGAAGCAATCAATTTATACATACCCTGCTCCTGATTGCATGTGTAGAGCTTAG
Protein sequence

>MS.gene052154.t1

EWIAPKPRHVTLLQGALQRRTSVEVQTNLWSPLAYQGWKPCTVPPNSPSLPEKSRGYIQVFLDGGLNQQKMGICDAVAVAKILNVTLVIPHFEVNPVWQDSSSFADIFDVDHFIDVLRDEVSIVKELPGEYSWSTREYYATGIRATRIKTAPVHATADWYTENVLPVLQSYGVAAIAPFSHRLTFNGLPSDIQRLRCKVNFEALNFVPHVKELGDILVQRLRYNSSINQAESNDYLPEEADKLGKQQSGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFNDEELRNQGRCPLTPEEIGLLLAALGFNNRTRLYLASHKVYGGKARLETLSTLFPFMEDKKSLVSAETMAKVNGKASLLAAVDYYVSMHSDIFISASPGNMHNALVAHRAYKNLKTIRPNMALLGQLFQNKSIGWSEFQRAVLDGHKNRQGQIRLRKEKQSIYTYPAPDCMCRA