Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34430.t1 | RHN81905.1 | 98.4 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 2.30E-299 | 1037.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34430.t1 | Q8W486 | 78.0 | 514 | 106 | 3 | 1 | 508 | 1 | 513 | 1.1e-236 | 820.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34430.t1 | A0A396K1R1 | 98.4 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 1.7e-299 | 1037.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049669 | MS.gene34430 | -0.805376 | 1.38E-49 | -1.69E-46 |
MS.gene050750 | MS.gene34430 | -0.809481 | 1.85E-50 | -1.69E-46 |
MS.gene050953 | MS.gene34430 | -0.813953 | 1.97E-51 | -1.69E-46 |
MS.gene051924 | MS.gene34430 | 0.82477 | 6.74E-54 | -1.69E-46 |
MS.gene051926 | MS.gene34430 | 0.826995 | 2.00E-54 | -1.69E-46 |
MS.gene052309 | MS.gene34430 | 0.835607 | 1.52E-56 | -1.69E-46 |
MS.gene052358 | MS.gene34430 | 0.837868 | 4.03E-57 | -1.69E-46 |
MS.gene052464 | MS.gene34430 | -0.802684 | 4.99E-49 | -1.69E-46 |
MS.gene052965 | MS.gene34430 | 0.980237 | 9.33E-150 | -1.69E-46 |
MS.gene054291 | MS.gene34430 | 0.831422 | 1.68E-55 | -1.69E-46 |
MS.gene054405 | MS.gene34430 | -0.812905 | 3.35E-51 | -1.69E-46 |
MS.gene054950 | MS.gene34430 | 0.825942 | 3.56E-54 | -1.69E-46 |
MS.gene055701 | MS.gene34430 | -0.812163 | 4.87E-51 | -1.69E-46 |
MS.gene056779 | MS.gene34430 | -0.812856 | 3.43E-51 | -1.69E-46 |
MS.gene05761 | MS.gene34430 | -0.836351 | 9.85E-57 | -1.69E-46 |
MS.gene060879 | MS.gene34430 | -0.803477 | 3.42E-49 | -1.69E-46 |
MS.gene061040 | MS.gene34430 | 0.85686 | 2.42E-62 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene34430 | MS.gene48415 | PPI |
MS.gene34430 | MS.gene070682 | PPI |
MS.gene34430 | MS.gene053752 | PPI |
MS.gene013077 | MS.gene34430 | PPI |
MS.gene34430 | MS.gene94094 | PPI |
MS.gene020433 | MS.gene34430 | PPI |
MS.gene34430 | MS.gene054943 | PPI |
MS.gene34430 | MS.gene049296 | PPI |
MS.gene34430 | MS.gene73918 | PPI |
MS.gene34430 | MS.gene046426 | PPI |
MS.gene06419 | MS.gene34430 | PPI |
MS.gene34430 | MS.gene069107 | PPI |
MS.gene34430 | MS.gene052154 | PPI |
MS.gene013323 | MS.gene34430 | PPI |
MS.gene052156 | MS.gene34430 | PPI |
MS.gene34430 | MS.gene06273 | PPI |
MS.gene027787 | MS.gene34430 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34430.t1 | MTR_1g102030 | 90.751 | 519 | 38 | 2 | 1 | 510 | 1 | 518 | 0.0 | 978 |
MS.gene34430.t1 | MTR_1g101990 | 98.726 | 314 | 4 | 0 | 197 | 510 | 1 | 314 | 0.0 | 651 |
MS.gene34430.t1 | MTR_1g101985 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 2.92e-128 | 371 |
MS.gene34430.t1 | MTR_4g082310 | 39.355 | 465 | 256 | 12 | 29 | 477 | 38 | 492 | 7.66e-98 | 305 |
MS.gene34430.t1 | MTR_5g042200 | 37.161 | 479 | 264 | 12 | 29 | 485 | 19 | 482 | 5.89e-91 | 286 |
MS.gene34430.t1 | MTR_4g125460 | 39.310 | 435 | 229 | 11 | 61 | 476 | 62 | 480 | 7.18e-90 | 283 |
MS.gene34430.t1 | MTR_5g064620 | 36.281 | 441 | 244 | 9 | 61 | 476 | 85 | 513 | 5.13e-89 | 283 |
MS.gene34430.t1 | MTR_3g115220 | 39.302 | 430 | 246 | 10 | 61 | 484 | 82 | 502 | 5.20e-89 | 284 |
MS.gene34430.t1 | MTR_4g125460 | 39.310 | 435 | 229 | 11 | 61 | 476 | 201 | 619 | 2.44e-88 | 283 |
MS.gene34430.t1 | MTR_3g096020 | 39.140 | 442 | 233 | 10 | 61 | 479 | 163 | 591 | 1.12e-87 | 281 |
MS.gene34430.t1 | MTR_4g100810 | 41.176 | 391 | 219 | 6 | 88 | 475 | 108 | 490 | 1.38e-86 | 276 |
MS.gene34430.t1 | MTR_2g059350 | 38.835 | 412 | 237 | 7 | 73 | 473 | 100 | 507 | 1.54e-85 | 273 |
MS.gene34430.t1 | MTR_5g032100 | 36.123 | 454 | 246 | 11 | 58 | 475 | 57 | 502 | 5.68e-85 | 271 |
MS.gene34430.t1 | MTR_5g081690 | 40.494 | 405 | 210 | 11 | 88 | 475 | 121 | 511 | 6.16e-85 | 272 |
MS.gene34430.t1 | MTR_4g110030 | 40.191 | 418 | 210 | 12 | 82 | 473 | 105 | 508 | 8.54e-85 | 271 |
MS.gene34430.t1 | MTR_6g016015 | 40.587 | 409 | 226 | 8 | 72 | 467 | 98 | 502 | 9.26e-85 | 271 |
MS.gene34430.t1 | MTR_3g099480 | 36.735 | 441 | 245 | 9 | 60 | 478 | 113 | 541 | 4.10e-84 | 270 |
MS.gene34430.t1 | MTR_5g099010 | 37.705 | 427 | 244 | 10 | 61 | 478 | 90 | 503 | 4.53e-84 | 271 |
MS.gene34430.t1 | MTR_4g019210 | 37.327 | 434 | 241 | 10 | 61 | 477 | 205 | 624 | 7.86e-84 | 272 |
MS.gene34430.t1 | MTR_3g100310 | 36.052 | 466 | 253 | 13 | 49 | 476 | 59 | 517 | 2.04e-83 | 268 |
MS.gene34430.t1 | MTR_3g086570 | 35.321 | 436 | 256 | 10 | 62 | 476 | 119 | 549 | 3.59e-82 | 265 |
MS.gene34430.t1 | MTR_1g031590 | 37.358 | 439 | 244 | 12 | 59 | 477 | 122 | 549 | 1.04e-80 | 261 |
MS.gene34430.t1 | MTR_5g012770 | 41.734 | 369 | 197 | 6 | 88 | 455 | 124 | 475 | 1.86e-79 | 257 |
MS.gene34430.t1 | MTR_3g005340 | 35.032 | 471 | 257 | 16 | 59 | 496 | 119 | 573 | 7.86e-79 | 257 |
MS.gene34430.t1 | MTR_4g084570 | 35.217 | 460 | 261 | 13 | 41 | 477 | 105 | 550 | 1.93e-78 | 256 |
MS.gene34430.t1 | MTR_5g059260 | 37.136 | 412 | 223 | 11 | 89 | 474 | 158 | 559 | 1.88e-72 | 241 |
MS.gene34430.t1 | MTR_3g026650 | 31.308 | 428 | 273 | 9 | 61 | 477 | 142 | 559 | 3.19e-67 | 226 |
MS.gene34430.t1 | MTR_3g086570 | 38.339 | 313 | 173 | 6 | 62 | 355 | 119 | 430 | 1.22e-66 | 221 |
MS.gene34430.t1 | MTR_4g023030 | 32.634 | 429 | 266 | 9 | 61 | 477 | 202 | 619 | 2.14e-65 | 223 |
MS.gene34430.t1 | MTR_4g132590 | 33.619 | 467 | 251 | 13 | 60 | 476 | 37 | 494 | 1.28e-63 | 215 |
MS.gene34430.t1 | MTR_2g016470 | 31.692 | 467 | 257 | 15 | 61 | 475 | 159 | 615 | 2.48e-63 | 217 |
MS.gene34430.t1 | MTR_4g132590 | 33.619 | 467 | 251 | 13 | 60 | 476 | 136 | 593 | 1.92e-62 | 214 |
MS.gene34430.t1 | MTR_3g026650 | 33.623 | 345 | 214 | 5 | 61 | 396 | 142 | 480 | 7.21e-59 | 202 |
MS.gene34430.t1 | MTR_7g017330 | 32.615 | 325 | 193 | 8 | 58 | 367 | 77 | 390 | 7.94e-49 | 179 |
MS.gene34430.t1 | MTR_3g092590 | 31.148 | 366 | 231 | 8 | 22 | 369 | 22 | 384 | 2.73e-46 | 170 |
MS.gene34430.t1 | MTR_3g092590 | 31.148 | 366 | 231 | 8 | 22 | 369 | 22 | 384 | 6.15e-46 | 170 |
MS.gene34430.t1 | MTR_4g010990 | 28.538 | 424 | 263 | 14 | 61 | 475 | 47 | 439 | 3.18e-44 | 162 |
MS.gene34430.t1 | MTR_3g026650 | 33.333 | 264 | 162 | 4 | 61 | 316 | 142 | 399 | 1.08e-43 | 159 |
MS.gene34430.t1 | MTR_1g007390 | 31.378 | 341 | 208 | 8 | 52 | 369 | 53 | 390 | 9.13e-41 | 156 |
MS.gene34430.t1 | MTR_4g010990 | 26.842 | 380 | 239 | 13 | 104 | 475 | 2 | 350 | 1.79e-32 | 127 |
MS.gene34430.t1 | MTR_7g064210 | 36.139 | 202 | 108 | 3 | 222 | 405 | 40 | 238 | 2.68e-32 | 128 |
MS.gene34430.t1 | MTR_4g008200 | 22.404 | 366 | 231 | 13 | 69 | 419 | 11 | 338 | 4.18e-19 | 89.4 |
MS.gene34430.t1 | MTR_4g008200 | 21.958 | 378 | 242 | 14 | 57 | 419 | 50 | 389 | 7.26e-19 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34430.t1 | AT1G04910 | 77.626 | 514 | 108 | 3 | 1 | 508 | 1 | 513 | 0.0 | 816 |
MS.gene34430.t1 | AT1G14020 | 39.750 | 400 | 223 | 8 | 88 | 475 | 91 | 484 | 1.02e-88 | 281 |
MS.gene34430.t1 | AT5G35570 | 39.955 | 443 | 229 | 14 | 55 | 477 | 218 | 643 | 1.57e-87 | 282 |
MS.gene34430.t1 | AT5G64600 | 37.838 | 444 | 230 | 12 | 61 | 476 | 91 | 516 | 5.75e-87 | 277 |
MS.gene34430.t1 | AT4G24530 | 36.784 | 454 | 241 | 11 | 61 | 477 | 75 | 519 | 5.96e-86 | 275 |
MS.gene34430.t1 | AT2G37980 | 37.808 | 447 | 245 | 11 | 49 | 477 | 187 | 618 | 6.56e-86 | 278 |
MS.gene34430.t1 | AT2G03280 | 40.100 | 399 | 220 | 9 | 88 | 473 | 88 | 480 | 7.05e-86 | 273 |
MS.gene34430.t1 | AT5G15740 | 40.000 | 405 | 223 | 9 | 84 | 473 | 99 | 498 | 8.51e-86 | 274 |
MS.gene34430.t1 | AT4G38390 | 39.747 | 395 | 228 | 7 | 86 | 477 | 121 | 508 | 2.35e-85 | 274 |
MS.gene34430.t1 | AT5G65470 | 35.575 | 461 | 251 | 12 | 54 | 476 | 52 | 504 | 4.20e-84 | 269 |
MS.gene34430.t1 | AT5G01100 | 38.901 | 455 | 239 | 13 | 45 | 477 | 174 | 611 | 7.33e-84 | 272 |
MS.gene34430.t1 | AT3G54100 | 36.986 | 438 | 241 | 11 | 59 | 477 | 193 | 614 | 2.15e-83 | 271 |
MS.gene34430.t1 | AT1G22460 | 36.674 | 439 | 244 | 11 | 59 | 475 | 132 | 558 | 8.76e-83 | 268 |
MS.gene34430.t1 | AT3G02250 | 36.062 | 452 | 257 | 11 | 49 | 473 | 52 | 498 | 2.47e-81 | 262 |
MS.gene34430.t1 | AT1G20550 | 38.903 | 401 | 226 | 12 | 86 | 479 | 107 | 495 | 3.74e-81 | 263 |
MS.gene34430.t1 | AT3G26370 | 35.862 | 435 | 253 | 10 | 63 | 476 | 128 | 557 | 3.98e-81 | 263 |
MS.gene34430.t1 | AT2G03280 | 37.619 | 420 | 217 | 9 | 88 | 467 | 88 | 502 | 8.95e-80 | 258 |
MS.gene34430.t1 | AT4G16650 | 40.816 | 392 | 219 | 9 | 88 | 475 | 122 | 504 | 1.77e-79 | 258 |
MS.gene34430.t1 | AT4G16650 | 40.816 | 392 | 219 | 9 | 88 | 475 | 122 | 504 | 1.77e-79 | 258 |
MS.gene34430.t1 | AT2G01480 | 36.344 | 454 | 249 | 15 | 59 | 487 | 127 | 565 | 3.79e-78 | 255 |
MS.gene34430.t1 | AT1G76270 | 37.905 | 401 | 230 | 12 | 86 | 479 | 104 | 492 | 1.26e-77 | 254 |
MS.gene34430.t1 | AT2G01480 | 38.832 | 394 | 203 | 13 | 59 | 428 | 127 | 506 | 1.97e-77 | 253 |
MS.gene34430.t1 | AT1G35510 | 33.135 | 504 | 284 | 14 | 26 | 484 | 71 | 566 | 8.18e-77 | 252 |
MS.gene34430.t1 | AT1G14970 | 35.455 | 440 | 251 | 14 | 57 | 475 | 6 | 433 | 4.77e-75 | 244 |
MS.gene34430.t1 | AT1G38065 | 37.046 | 413 | 224 | 11 | 88 | 474 | 36 | 438 | 1.41e-74 | 243 |
MS.gene34430.t1 | AT1G38065 | 37.046 | 413 | 224 | 11 | 88 | 474 | 26 | 428 | 1.58e-74 | 243 |
MS.gene34430.t1 | AT1G14970 | 37.010 | 408 | 228 | 12 | 88 | 475 | 9 | 407 | 1.90e-74 | 241 |
MS.gene34430.t1 | AT1G14970 | 35.385 | 455 | 257 | 14 | 48 | 475 | 109 | 553 | 9.54e-74 | 244 |
MS.gene34430.t1 | AT1G38131 | 37.046 | 413 | 224 | 11 | 88 | 474 | 155 | 557 | 2.25e-73 | 243 |
MS.gene34430.t1 | AT5G63390 | 33.411 | 431 | 259 | 11 | 60 | 475 | 132 | 549 | 1.79e-69 | 232 |
MS.gene34430.t1 | AT2G44500 | 32.864 | 426 | 264 | 9 | 61 | 474 | 146 | 561 | 9.25e-69 | 231 |
MS.gene34430.t1 | AT3G07900 | 31.776 | 428 | 272 | 9 | 61 | 477 | 157 | 575 | 5.41e-64 | 218 |
MS.gene34430.t1 | AT1G11990 | 30.909 | 440 | 282 | 8 | 54 | 476 | 156 | 590 | 4.97e-63 | 216 |
MS.gene34430.t1 | AT1G62330 | 31.466 | 464 | 262 | 11 | 60 | 474 | 193 | 649 | 7.41e-63 | 217 |
MS.gene34430.t1 | AT1G29200 | 33.949 | 433 | 233 | 11 | 88 | 475 | 70 | 494 | 2.16e-59 | 204 |
MS.gene34430.t1 | AT1G29200 | 33.949 | 433 | 233 | 11 | 88 | 475 | 70 | 494 | 2.16e-59 | 204 |
MS.gene34430.t1 | AT1G29200 | 31.066 | 544 | 280 | 16 | 19 | 475 | 75 | 610 | 5.72e-59 | 206 |
MS.gene34430.t1 | AT1G11990 | 28.333 | 480 | 285 | 8 | 51 | 476 | 138 | 612 | 1.26e-57 | 202 |
MS.gene34430.t1 | AT1G29200 | 33.724 | 427 | 230 | 11 | 94 | 475 | 2 | 420 | 4.59e-57 | 196 |
MS.gene34430.t1 | AT3G03810 | 33.421 | 380 | 209 | 10 | 28 | 369 | 10 | 383 | 1.07e-55 | 197 |
MS.gene34430.t1 | AT3G03810 | 33.421 | 380 | 209 | 10 | 28 | 369 | 10 | 383 | 1.07e-55 | 197 |
MS.gene34430.t1 | AT1G52630 | 30.140 | 428 | 261 | 13 | 55 | 475 | 40 | 436 | 7.77e-51 | 180 |
MS.gene34430.t1 | AT3G30300 | 33.013 | 312 | 192 | 7 | 73 | 369 | 85 | 394 | 5.98e-48 | 176 |
MS.gene34430.t1 | AT3G30300 | 33.013 | 312 | 192 | 7 | 73 | 369 | 85 | 394 | 5.98e-48 | 176 |
MS.gene34430.t1 | AT3G26370 | 38.843 | 242 | 137 | 4 | 63 | 293 | 128 | 369 | 1.58e-46 | 167 |
MS.gene34430.t1 | AT2G44500 | 34.470 | 264 | 160 | 4 | 61 | 316 | 146 | 404 | 5.81e-43 | 158 |
MS.gene34430.t1 | AT1G52630 | 28.307 | 378 | 234 | 12 | 104 | 475 | 2 | 348 | 3.40e-36 | 138 |
MS.gene34430.t1 | AT3G21190 | 24.339 | 378 | 216 | 15 | 81 | 439 | 79 | 405 | 2.32e-18 | 87.8 |
MS.gene34430.t1 | AT1G51630 | 25.072 | 347 | 201 | 12 | 88 | 419 | 91 | 393 | 5.24e-18 | 86.7 |
Find 109 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGAAATTAAAGGCATTTC+AGG | 0.211451 | 1.2:+76051937 | MS.gene34430:CDS |
ATTCTCCCTATCAATGAAAA+TGG | 0.236334 | 1.2:-76054390 | None:intergenic |
CTTGGTCATCGCCTTTATTA+TGG | 0.252041 | 1.2:+76054326 | MS.gene34430:CDS |
AGTCTTTCTATACAAATTCT+TGG | 0.285777 | 1.2:+76054498 | MS.gene34430:CDS |
TTGGGTGGACAATTGTCTTC+TGG | 0.307630 | 1.2:-76054554 | None:intergenic |
AAATATTCTGCATGATGAAT+TGG | 0.310357 | 1.2:+76054586 | MS.gene34430:CDS |
AAGGAGTTTGCATCCAATTC+AGG | 0.312722 | 1.2:-76049858 | None:intergenic |
AATTGGATGCAAACTCCTTC+TGG | 0.314006 | 1.2:+76049862 | MS.gene34430:CDS |
CAGAATATTTAAAACATCAT+TGG | 0.318046 | 1.2:-76054573 | None:intergenic |
TCAGTAGTATACCAACTTAT+AGG | 0.339678 | 1.2:-76052071 | None:intergenic |
GATGTTTGACAGAAGCATTC+AGG | 0.344083 | 1.2:-76054521 | None:intergenic |
CTTTGGAGCAATGCTGATTC+CGG | 0.352641 | 1.2:+76048962 | MS.gene34430:CDS |
CCTAACGGCCTCATCAAAAT+CGG | 0.368288 | 1.2:-76054423 | None:intergenic |
ATGGATATGTTGTCATTTGC+TGG | 0.382372 | 1.2:+76052311 | MS.gene34430:CDS |
TGAAAAGGGAGTAAGATAAA+TGG | 0.392886 | 1.2:-76052123 | None:intergenic |
TAGTCCGAAAACCATAATAA+AGG | 0.394892 | 1.2:-76054337 | None:intergenic |
TACACTAGTGCTGCCTGAAT+TGG | 0.395186 | 1.2:+76049845 | MS.gene34430:CDS |
TTCTCCCTATCAATGAAAAT+GGG | 0.403139 | 1.2:-76054389 | None:intergenic |
TAACTCTACACCTCAACCTT+TGG | 0.403900 | 1.2:-76052181 | None:intergenic |
GGAAGACACATCGGAGGATC+AGG | 0.408537 | 1.2:+76048721 | MS.gene34430:CDS |
TTTACCTCCTCGGGAGTCAA+TGG | 0.416227 | 1.2:-76053862 | None:intergenic |
CCTTCATGTCCATACATCTT+CGG | 0.416287 | 1.2:+76052282 | MS.gene34430:CDS |
GGTTGTTTGCAAAGTTGCTT+GGG | 0.417543 | 1.2:-76054301 | None:intergenic |
TTCAGCTAACCGGTGTGAAA+AGG | 0.419566 | 1.2:-76052138 | None:intergenic |
TGTCAATTTCTTCAGCTAAC+CGG | 0.425709 | 1.2:-76052148 | None:intergenic |
AAAGTTGCTTGGGCCATCAT+AGG | 0.426197 | 1.2:-76054291 | None:intergenic |
CTTGCAGCTGGAGAATTGTT+TGG | 0.428527 | 1.2:+76054110 | MS.gene34430:CDS |
AGAATATTTAAAACATCATT+GGG | 0.428907 | 1.2:-76054572 | None:intergenic |
CATCGTCGCCGCGTTCTCAT+TGG | 0.429992 | 1.2:+76048999 | MS.gene34430:CDS |
CTAGGGAACAAACTTCGAAA+TGG | 0.433828 | 1.2:-76054152 | None:intergenic |
CATCTCAAACCGAAGATGTA+TGG | 0.438346 | 1.2:-76052291 | None:intergenic |
TGCTCCAAAGCTCTTCTAAA+CGG | 0.447361 | 1.2:-76048949 | None:intergenic |
TGACTTAGCTTCATAATATG+TGG | 0.449252 | 1.2:-76052227 | None:intergenic |
AGATCCGTTTAGAAGAGCTT+TGG | 0.450751 | 1.2:+76048945 | MS.gene34430:intron |
CACCTCAACCTTTGGTACTC+AGG | 0.452836 | 1.2:-76052173 | None:intergenic |
AACTTATAGGAGCATCTCTA+GGG | 0.453270 | 1.2:-76052058 | None:intergenic |
CAACTTATAGGAGCATCTCT+AGG | 0.455037 | 1.2:-76052059 | None:intergenic |
AGGTTGTTTGCAAAGTTGCT+TGG | 0.455901 | 1.2:-76054302 | None:intergenic |
CTAACGGCCTCATCAAAATC+GGG | 0.459265 | 1.2:-76054422 | None:intergenic |
AAGAGCTTGCTGAGAACACT+AGG | 0.471435 | 1.2:+76054207 | MS.gene34430:CDS |
GTAATGCTTAAAACAAACTT+TGG | 0.474936 | 1.2:+76054449 | MS.gene34430:CDS |
AACTTTGCAAACAACCTCCT+TGG | 0.484378 | 1.2:+76054308 | MS.gene34430:CDS |
AGGTTCTGCTGTCGATTACA+TGG | 0.485297 | 1.2:+76054238 | MS.gene34430:CDS |
TTACCTCCTCGGGAGTCAAT+GGG | 0.488237 | 1.2:-76053861 | None:intergenic |
TCAGCTAACCGGTGTGAAAA+GGG | 0.491222 | 1.2:-76052137 | None:intergenic |
TTTACATGCAGTGGTTTCCA+TGG | 0.495392 | 1.2:+76051824 | MS.gene34430:intron |
CCATTCTGACGGTGAAGTCC+AGG | 0.499200 | 1.2:-76048700 | None:intergenic |
CAGCTGGAGAATTGTTTGGT+GGG | 0.499288 | 1.2:+76054114 | MS.gene34430:CDS |
GTCTAAAATTTACCTTCTCA+TGG | 0.499633 | 1.2:-76048609 | None:intergenic |
ACCAGGATATATCTTGCAGC+TGG | 0.508790 | 1.2:+76054098 | MS.gene34430:CDS |
GCTCCTCCGAGTAAGACTAA+TGG | 0.508887 | 1.2:+76049135 | MS.gene34430:intron |
CGATGACGGTCGCCAACCAC+CGG | 0.513924 | 1.2:-76048981 | None:intergenic |
TCGGGAGAAACACGCTTATG+AGG | 0.515335 | 1.2:-76054476 | None:intergenic |
ACTCCTTCTGGCATGATGAC+AGG | 0.515369 | 1.2:+76049874 | MS.gene34430:CDS |
CATACATCTTCGGTTTGAGA+TGG | 0.516387 | 1.2:+76052292 | MS.gene34430:CDS |
TCCAGCTGCAAGATATATCC+TGG | 0.517649 | 1.2:-76054099 | None:intergenic |
CTAGAGATGCTCCTATAAGT+TGG | 0.519061 | 1.2:+76052060 | MS.gene34430:CDS |
CCTGGACTTCACCGTCAGAA+TGG | 0.520574 | 1.2:+76048700 | MS.gene34430:CDS |
GAACTGTGATTCTCAAGTCT+AGG | 0.531519 | 1.2:-76054170 | None:intergenic |
TGATGCTCTCAAGAAAATGA+AGG | 0.532179 | 1.2:+76052091 | MS.gene34430:CDS |
AGCTGGAGAATTGTTTGGTG+GGG | 0.534335 | 1.2:+76054115 | MS.gene34430:CDS |
CCGAAGATGTATGGACATGA+AGG | 0.541002 | 1.2:-76052282 | None:intergenic |
CGATGTGTCTTCCATTCTGA+CGG | 0.542650 | 1.2:-76048711 | None:intergenic |
AACTGTGATTCTCAAGTCTA+GGG | 0.546837 | 1.2:-76054169 | None:intergenic |
GCAGCTGGAGAATTGTTTGG+TGG | 0.547573 | 1.2:+76054113 | MS.gene34430:CDS |
TTTAAGCATTACTTTCCTAA+CGG | 0.550039 | 1.2:-76054438 | None:intergenic |
ATCGGAGGATCAGGATTCAA+AGG | 0.560767 | 1.2:+76048730 | MS.gene34430:CDS |
GCATGAAAATGTCAGAAAGA+AGG | 0.561934 | 1.2:-76054265 | None:intergenic |
TTGCTTGGGCCATCATAGGT+TGG | 0.563703 | 1.2:-76054287 | None:intergenic |
GCAATGCTGATTCCGGTGGT+TGG | 0.569539 | 1.2:+76048969 | MS.gene34430:CDS |
ATCCTGAGTACCAAAGGTTG+AGG | 0.570587 | 1.2:+76052171 | MS.gene34430:CDS |
AGTCAATGGGCATTTGCCGA+TGG | 0.571393 | 1.2:-76053848 | None:intergenic |
CTTTGATATATTTACACCTG+AGG | 0.580997 | 1.2:+76053753 | MS.gene34430:CDS |
AGAGCTTGCTGAGAACACTA+GGG | 0.583230 | 1.2:+76054208 | MS.gene34430:CDS |
CATAATAAAGGCGATGACCA+AGG | 0.584303 | 1.2:-76054325 | None:intergenic |
AAATAGCCATTAGTCTTACT+CGG | 0.584605 | 1.2:-76049141 | None:intergenic |
TGGATATGTTGTCATTTGCT+GGG | 0.589516 | 1.2:+76052312 | MS.gene34430:CDS |
TTGACAATCCTGAGTACCAA+AGG | 0.598187 | 1.2:+76052165 | MS.gene34430:CDS |
TGAGAACGCGGCGACGATGA+CGG | 0.602998 | 1.2:-76048995 | None:intergenic |
CTCAAGAAAATGAAGGAACA+TGG | 0.606285 | 1.2:+76052098 | MS.gene34430:CDS |
GCTCAACATCATAGATACCA+TGG | 0.609063 | 1.2:-76051841 | None:intergenic |
TATAATGAAAGAAGAGCCAT+CGG | 0.611176 | 1.2:+76053832 | MS.gene34430:CDS |
TCTCCCTATCAATGAAAATG+GGG | 0.612552 | 1.2:-76054388 | None:intergenic |
TATTTGCGTGTTCGATGTAA+CGG | 0.619867 | 1.2:+76049159 | MS.gene34430:CDS |
ATTAAGTCTCCACCATGAGA+AGG | 0.622750 | 1.2:+76048597 | None:intergenic |
ATACCTGTCATCATGCCAGA+AGG | 0.634087 | 1.2:-76049877 | None:intergenic |
AGAATTTGTATAGAAAGACT+CGG | 0.634296 | 1.2:-76054495 | None:intergenic |
ATATTTAAAACATCATTGGG+TGG | 0.634628 | 1.2:-76054569 | None:intergenic |
TTATAGGAGCATCTCTAGGG+GGG | 0.634968 | 1.2:-76052055 | None:intergenic |
GAATTTGTATAGAAAGACTC+GGG | 0.640294 | 1.2:-76054494 | None:intergenic |
CTCCCTATCAATGAAAATGG+GGG | 0.642427 | 1.2:-76054387 | None:intergenic |
ACTTATAGGAGCATCTCTAG+GGG | 0.644818 | 1.2:-76052057 | None:intergenic |
GTTGATAAGCTACGTGCACA+AGG | 0.647748 | 1.2:+76052257 | MS.gene34430:CDS |
TGGAGCAATGCTGATTCCGG+TGG | 0.651971 | 1.2:+76048965 | MS.gene34430:CDS |
CGAAGATGTATGGACATGAA+GGG | 0.654639 | 1.2:-76052281 | None:intergenic |
TTGCGTGTTCGATGTAACGG+TGG | 0.668128 | 1.2:+76049162 | MS.gene34430:CDS |
CTTATAGGAGCATCTCTAGG+GGG | 0.668584 | 1.2:-76052056 | None:intergenic |
TAACGGCCTCATCAAAATCG+GGG | 0.672059 | 1.2:-76054421 | None:intergenic |
CTAATGCTGTTCTTGCTGCG+CGG | 0.678273 | 1.2:+76049811 | MS.gene34430:CDS |
CGTCAGAATGGAAGACACAT+CGG | 0.681405 | 1.2:+76048712 | MS.gene34430:CDS |
ATGCCCATTGACTCCCGAGG+AGG | 0.681727 | 1.2:+76053858 | MS.gene34430:CDS |
GAGCTTGCTGAGAACACTAG+GGG | 0.690781 | 1.2:+76054209 | MS.gene34430:CDS |
CAAATGCCCATTGACTCCCG+AGG | 0.706848 | 1.2:+76053855 | MS.gene34430:CDS |
ATACGGGGCCAATGAGAACG+CGG | 0.715796 | 1.2:-76049007 | None:intergenic |
CAGAATGGAAGACACATCGG+AGG | 0.720435 | 1.2:+76048715 | MS.gene34430:CDS |
AGCACTTCATTAGAACACTG+AGG | 0.734261 | 1.2:+76051861 | MS.gene34430:CDS |
AGCTTGCTGAGAACACTAGG+GGG | 0.740298 | 1.2:+76054210 | MS.gene34430:CDS |
AATAAAGGCGATGACCAAGG+AGG | 0.741984 | 1.2:-76054322 | None:intergenic |
TAGCCATTAGTCTTACTCGG+AGG | 0.748011 | 1.2:-76049138 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTATGAGTATATATAT+AGG | + | chr1.2:76049245-76049264 | MS.gene34430:intron | 10.0% |
!!! | ATATTTAATTGTTTTTGTTT+TGG | + | chr1.2:76051648-76051667 | MS.gene34430:intron | 10.0% |
!!! | ATTTTATGAGTATATATATA+GGG | + | chr1.2:76049246-76049265 | MS.gene34430:intron | 10.0% |
!!! | TTTTTTTTTTGTTTATTGTT+GGG | + | chr1.2:76048921-76048940 | MS.gene34430:intron | 10.0% |
!!! | TTTTTTTTTTTGTTTATTGT+TGG | + | chr1.2:76048920-76048939 | MS.gene34430:intron | 10.0% |
!! | AAAAATATTTCCAAAAAGAA+TGG | - | chr1.2:76049496-76049515 | None:intergenic | 15.0% |
!! | AAAATAATATATACCGATAT+AGG | + | chr1.2:76049671-76049690 | MS.gene34430:intron | 15.0% |
!!! | AAACAATTTTTTTTTTGCTA+AGG | - | chr1.2:76053931-76053950 | None:intergenic | 15.0% |
!!! | AAGTTTTAATCACATTTTTT+GGG | + | chr1.2:76052953-76052972 | MS.gene34430:intron | 15.0% |
!!! | AGAATATTTAAAACATCATT+GGG | - | chr1.2:76054575-76054594 | None:intergenic | 15.0% |
!!! | ATTTTCTTAAATATGCATTT+GGG | + | chr1.2:76053539-76053558 | MS.gene34430:intron | 15.0% |
!!! | TAAGTTTTAATCACATTTTT+TGG | + | chr1.2:76052952-76052971 | MS.gene34430:intron | 15.0% |
!!! | TATTTTCTTAAATATGCATT+TGG | + | chr1.2:76053538-76053557 | MS.gene34430:intron | 15.0% |
!!! | TGTGTTTAACTTATAATAAA+AGG | + | chr1.2:76050671-76050690 | MS.gene34430:intron | 15.0% |
!! | AACATTCAAAAACAGTTTAA+GGG | - | chr1.2:76053412-76053431 | None:intergenic | 20.0% |
!! | TAAAGTTAAAAGATAGTTTC+TGG | + | chr1.2:76051246-76051265 | MS.gene34430:intron | 20.0% |
!! | TAAATATAAGAAACTTAGTC+TGG | - | chr1.2:76051635-76051654 | None:intergenic | 20.0% |
!! | TAACAACAAATATAACCATA+CGG | - | chr1.2:76050743-76050762 | None:intergenic | 20.0% |
!! | TATGATGCCAATAATTTAAT+TGG | + | chr1.2:76054009-76054028 | MS.gene34430:intron | 20.0% |
!! | TCAGGTAGATTATAATATTT+GGG | + | chr1.2:76051955-76051974 | MS.gene34430:intron | 20.0% |
!! | TCTACATCCAATTAAATTAT+TGG | - | chr1.2:76054019-76054038 | None:intergenic | 20.0% |
!! | TTAGAATCTTATTCTGATTT+AGG | + | chr1.2:76051683-76051702 | MS.gene34430:intron | 20.0% |
!! | TTCAGGTAGATTATAATATT+TGG | + | chr1.2:76051954-76051973 | MS.gene34430:intron | 20.0% |
!! | TTGACTTATTATTGAAACAT+GGG | + | chr1.2:76050606-76050625 | MS.gene34430:intron | 20.0% |
!! | TTGTTAAATTTGTGATGAAT+TGG | + | chr1.2:76051752-76051771 | MS.gene34430:intron | 20.0% |
!!! | AAAAAAATTGTTTCTTTGTC+TGG | + | chr1.2:76053938-76053957 | MS.gene34430:intron | 20.0% |
!!! | AACTATCTTTTAACTTTATG+TGG | - | chr1.2:76051244-76051263 | None:intergenic | 20.0% |
!!! | AATTTTCTGATAATGTGTTA+TGG | + | chr1.2:76049097-76049116 | MS.gene34430:intron | 20.0% |
!!! | ACTATCTTTTAACTTTATGT+GGG | - | chr1.2:76051243-76051262 | None:intergenic | 20.0% |
!!! | AGTTTTTTATTTCTTACCAA+GGG | + | chr1.2:76052738-76052757 | MS.gene34430:intron | 20.0% |
!!! | ATATTTGTTGTTACTTCATT+GGG | + | chr1.2:76050750-76050769 | MS.gene34430:intron | 20.0% |
!!! | ATTGACTTATTATTGAAACA+TGG | + | chr1.2:76050605-76050624 | MS.gene34430:intron | 20.0% |
!!! | ATTTCTTTTTTCTTGAACAT+AGG | + | chr1.2:76050001-76050020 | MS.gene34430:intron | 20.0% |
!!! | ATTTTACAGTAAGAATGAAA+AGG | - | chr1.2:76049218-76049237 | None:intergenic | 20.0% |
!!! | CAGAATATTTAAAACATCAT+TGG | - | chr1.2:76054576-76054595 | None:intergenic | 20.0% |
!!! | TAAGTTAAACACATTTTTCT+AGG | - | chr1.2:76050664-76050683 | None:intergenic | 20.0% |
!!! | TAGTTTTTTATTTCTTACCA+AGG | + | chr1.2:76052737-76052756 | MS.gene34430:intron | 20.0% |
!!! | TATAGAATCTGTTTTATTGA+CGG | + | chr1.2:76053641-76053660 | MS.gene34430:intron | 20.0% |
!!! | TATATTTGTTGTTACTTCAT+TGG | + | chr1.2:76050749-76050768 | MS.gene34430:intron | 20.0% |
!!! | TCATTATAGACTAGTTTTTT+AGG | - | chr1.2:76053820-76053839 | None:intergenic | 20.0% |
!!! | TTGAAATCATTTTAATTTCC+TGG | + | chr1.2:76051989-76052008 | MS.gene34430:intron | 20.0% |
!!! | TTTTACAGTAAGAATGAAAA+GGG | - | chr1.2:76049217-76049236 | None:intergenic | 20.0% |
! | AAATACATGTATCAGTCTAT+CGG | - | chr1.2:76049382-76049401 | None:intergenic | 25.0% |
! | AAATATTCTGCATGATGAAT+TGG | + | chr1.2:76054586-76054605 | MS.gene34430:CDS | 25.0% |
! | ACAGAAATAGAAAGAGTAAA+AGG | - | chr1.2:76052579-76052598 | None:intergenic | 25.0% |
! | AGAATTTGTATAGAAAGACT+CGG | - | chr1.2:76054498-76054517 | None:intergenic | 25.0% |
! | AGTCAATGTATTTAAATACG+TGG | - | chr1.2:76050592-76050611 | None:intergenic | 25.0% |
! | AGTCTTTCTATACAAATTCT+TGG | + | chr1.2:76054498-76054517 | MS.gene34430:CDS | 25.0% |
! | ATAATATATACCGATATAGG+TGG | + | chr1.2:76049674-76049693 | MS.gene34430:intron | 25.0% |
! | ATTCCAGAAAATGAGAAAAA+TGG | + | chr1.2:76051908-76051927 | MS.gene34430:CDS | 25.0% |
! | ATTCTTACTGTAAAATGTGA+TGG | + | chr1.2:76049222-76049241 | MS.gene34430:intron | 25.0% |
! | CTTCTAAATATTGAGAAGTA+TGG | + | chr1.2:76049341-76049360 | MS.gene34430:intron | 25.0% |
! | CTTTAAACTCAACCATAAAA+TGG | - | chr1.2:76053085-76053104 | None:intergenic | 25.0% |
! | CTTTGAATCAAAAGAAAAAC+AGG | - | chr1.2:76052430-76052449 | None:intergenic | 25.0% |
! | GAACATTCAAAAACAGTTTA+AGG | - | chr1.2:76053413-76053432 | None:intergenic | 25.0% |
! | GAAGTTAAAAGATAGTTTCT+GGG | + | chr1.2:76050801-76050820 | MS.gene34430:intron | 25.0% |
! | GCATAAATTTGTGTTTAGTT+TGG | + | chr1.2:76051094-76051113 | MS.gene34430:intron | 25.0% |
! | GTAATGCTTAAAACAAACTT+TGG | + | chr1.2:76054449-76054468 | MS.gene34430:CDS | 25.0% |
! | TAATATATACCGATATAGGT+GGG | + | chr1.2:76049675-76049694 | MS.gene34430:intron | 25.0% |
! | TATATCCAATACTACGATAT+TGG | - | chr1.2:76049453-76049472 | None:intergenic | 25.0% |
! | TGGCAAAAAGAAGAAATTAA+AGG | + | chr1.2:76051928-76051947 | MS.gene34430:CDS | 25.0% |
! | TTAATTATATCAAACACAGC+TGG | - | chr1.2:76052935-76052954 | None:intergenic | 25.0% |
! | TTCTCAATTCTTGATTCAAA+TGG | + | chr1.2:76049961-76049980 | MS.gene34430:intron | 25.0% |
! | TTTAAGCATTACTTTCCTAA+CGG | - | chr1.2:76054441-76054460 | None:intergenic | 25.0% |
! | TTTGACCAAGAAATTGTATA+CGG | + | chr1.2:76053183-76053202 | MS.gene34430:intron | 25.0% |
!! | AAAACTAATTTTTACCTCCT+CGG | - | chr1.2:76053875-76053894 | None:intergenic | 25.0% |
!! | AACAGAAATTGTTCTACTTT+TGG | + | chr1.2:76051580-76051599 | MS.gene34430:intron | 25.0% |
!! | AAGCTGTTGTTATTACTATT+AGG | + | chr1.2:76050278-76050297 | MS.gene34430:intron | 25.0% |
!! | AATTTGATGAACAAGTTTTG+CGG | - | chr1.2:76049943-76049962 | None:intergenic | 25.0% |
!! | ATATTTAAAACATCATTGGG+TGG | - | chr1.2:76054572-76054591 | None:intergenic | 25.0% |
!! | ATATTTCTAAACATCTCTCT+AGG | + | chr1.2:76052611-76052630 | MS.gene34430:intron | 25.0% |
!! | ATCAGATGGATTTATAAGTT+GGG | + | chr1.2:76051499-76051518 | MS.gene34430:intron | 25.0% |
!! | CAATGTTTTCTGACAAAAAT+TGG | - | chr1.2:76052468-76052487 | None:intergenic | 25.0% |
!! | CATTTTATGGTTGAGTTTAA+AGG | + | chr1.2:76053083-76053102 | MS.gene34430:intron | 25.0% |
!! | GTTTTTCTCAAAGAATGATA+AGG | + | chr1.2:76053282-76053301 | MS.gene34430:intron | 25.0% |
!! | TATCAGATGGATTTATAAGT+TGG | + | chr1.2:76051498-76051517 | MS.gene34430:intron | 25.0% |
!! | TTGAATGTTCTAGTTAACTT+TGG | + | chr1.2:76053423-76053442 | MS.gene34430:intron | 25.0% |
!!! | AAGTTTTGAACATAATATCC+AGG | - | chr1.2:76052010-76052029 | None:intergenic | 25.0% |
!!! | ATTTTTTGGGCTTAACTTAA+AGG | + | chr1.2:76052966-76052985 | MS.gene34430:intron | 25.0% |
!!! | CAAGAGTTTTTAATTGAGTA+TGG | + | chr1.2:76049065-76049084 | MS.gene34430:intron | 25.0% |
!!! | CTATCTTTTAACTTTATGTG+GGG | - | chr1.2:76051242-76051261 | None:intergenic | 25.0% |
!!! | CTCAATATTTAGAAGTATCT+AGG | - | chr1.2:76049336-76049355 | None:intergenic | 25.0% |
!!! | TCATTTGTTGTTACTTCATA+GGG | + | chr1.2:76051196-76051215 | MS.gene34430:intron | 25.0% |
!!! | TTGTTTCTAAACATCTCTAA+TGG | + | chr1.2:76052541-76052560 | MS.gene34430:intron | 25.0% |
!!! | TTTCTTTTGATTCAAAGCTA+TGG | + | chr1.2:76052433-76052452 | MS.gene34430:intron | 25.0% |
AACTGAAATCATACCTAGAT+TGG | + | chr1.2:76053112-76053131 | MS.gene34430:intron | 30.0% | |
AATATATACCGATATAGGTG+GGG | + | chr1.2:76049676-76049695 | MS.gene34430:intron | 30.0% | |
AATCTTTGCAACCAAAGAAA+AGG | - | chr1.2:76051719-76051738 | None:intergenic | 30.0% | |
ACTACAAGAACAGATAGATA+CGG | - | chr1.2:76049027-76049046 | None:intergenic | 30.0% | |
AGAAATCACCACAATTTATG+AGG | - | chr1.2:76052858-76052877 | None:intergenic | 30.0% | |
AGAGAATTTCATAAACTTGC+TGG | + | chr1.2:76053376-76053395 | MS.gene34430:intron | 30.0% | |
AGTAACAACAAATGACCATA+AGG | - | chr1.2:76051191-76051210 | None:intergenic | 30.0% | |
AGTAGTGATCACATTCAAAT+TGG | - | chr1.2:76050042-76050061 | None:intergenic | 30.0% | |
AGTATCCAATATCGTAGTAT+TGG | + | chr1.2:76049445-76049464 | MS.gene34430:intron | 30.0% | |
AGTGGGTGAATAATAATCAA+CGG | - | chr1.2:76050407-76050426 | None:intergenic | 30.0% | |
ATAAGATTCTAACTACCAAG+AGG | - | chr1.2:76051675-76051694 | None:intergenic | 30.0% | |
ATCGTATTTCGACTTAGATA+TGG | - | chr1.2:76049583-76049602 | None:intergenic | 30.0% | |
ATGCTAGGATTACTATCAAT+GGG | + | chr1.2:76051328-76051347 | MS.gene34430:intron | 30.0% | |
ATGCTAGGATTATTATCAGT+GGG | + | chr1.2:76050882-76050901 | MS.gene34430:intron | 30.0% | |
ATGGACTTCTTATTGAAACA+TGG | + | chr1.2:76051066-76051085 | MS.gene34430:intron | 30.0% | |
ATTCTCCCTATCAATGAAAA+TGG | - | chr1.2:76054393-76054412 | None:intergenic | 30.0% | |
CATCTCTTCTTTACAGAATA+AGG | - | chr1.2:76052992-76053011 | None:intergenic | 30.0% | |
CGAAGTTAAAAGATAGTTTC+TGG | + | chr1.2:76050800-76050819 | MS.gene34430:intron | 30.0% | |
CTTGTATAACTCTATAGCTA+TGG | - | chr1.2:76052832-76052851 | None:intergenic | 30.0% | |
CTTTGATATATTTACACCTG+AGG | + | chr1.2:76053753-76053772 | MS.gene34430:CDS | 30.0% | |
GAATTTGTATAGAAAGACTC+GGG | - | chr1.2:76054497-76054516 | None:intergenic | 30.0% | |
GCTGTAGATTTATATATGTG+TGG | + | chr1.2:76049731-76049750 | MS.gene34430:intron | 30.0% | |
GTAGATTTATATATGTGTGG+TGG | + | chr1.2:76049734-76049753 | MS.gene34430:intron | 30.0% | |
GTAGTGATCACATTCAAATT+GGG | - | chr1.2:76050041-76050060 | None:intergenic | 30.0% | |
GTTCACATCAATTGAGATAT+AGG | + | chr1.2:76052366-76052385 | MS.gene34430:intron | 30.0% | |
TAAAACTAGCATTAGATGCT+TGG | + | chr1.2:76051032-76051051 | MS.gene34430:intron | 30.0% | |
TACATGATTTCCATACAACA+AGG | + | chr1.2:76050426-76050445 | MS.gene34430:intron | 30.0% | |
TACGATATTGGATACTTGAT+GGG | - | chr1.2:76049441-76049460 | None:intergenic | 30.0% | |
TAGAAAGAGTAAAAGGACTT+TGG | - | chr1.2:76052572-76052591 | None:intergenic | 30.0% | |
TAGGCATCTACTAACATATT+AGG | + | chr1.2:76050297-76050316 | MS.gene34430:intron | 30.0% | |
TAGTCCGAAAACCATAATAA+AGG | - | chr1.2:76054340-76054359 | None:intergenic | 30.0% | |
TATAATGAAAGAAGAGCCAT+CGG | + | chr1.2:76053832-76053851 | MS.gene34430:CDS | 30.0% | |
TATGCTAGGATTACTATCAA+TGG | + | chr1.2:76051327-76051346 | MS.gene34430:intron | 30.0% | |
TATGCTAGGATTATTATCAG+TGG | + | chr1.2:76050881-76050900 | MS.gene34430:intron | 30.0% | |
TCAGTAGTATACCAACTTAT+AGG | - | chr1.2:76052074-76052093 | None:intergenic | 30.0% | |
TGAAAAGGGAGTAAGATAAA+TGG | - | chr1.2:76052126-76052145 | None:intergenic | 30.0% | |
TGACTTAGCTTCATAATATG+TGG | - | chr1.2:76052230-76052249 | None:intergenic | 30.0% | |
TGCATTAAAAAAAGTGACAG+TGG | - | chr1.2:76053333-76053352 | None:intergenic | 30.0% | |
TTACAAGCAAGAATAAGTTG+AGG | - | chr1.2:76053261-76053280 | None:intergenic | 30.0% | |
TTATTCTGATTTAGGAGAAG+AGG | + | chr1.2:76051691-76051710 | MS.gene34430:intron | 30.0% | |
TTCTCCCTATCAATGAAAAT+GGG | - | chr1.2:76054392-76054411 | None:intergenic | 30.0% | |
TTGTATGGAAATCATGTAGT+GGG | - | chr1.2:76050424-76050443 | None:intergenic | 30.0% | |
TTGTGTGTAAACAATATGCT+AGG | + | chr1.2:76051313-76051332 | MS.gene34430:intron | 30.0% | |
TTTATTAAAAGATGCACCCA+AGG | - | chr1.2:76050928-76050947 | None:intergenic | 30.0% | |
! | AAACTAATTTTTACCTCCTC+GGG | - | chr1.2:76053874-76053893 | None:intergenic | 30.0% |
! | AAAGAATGGCTAAGAAGTAT+AGG | - | chr1.2:76049482-76049501 | None:intergenic | 30.0% |
! | AAGAATAAGTTGAGGAAAAC+AGG | - | chr1.2:76053253-76053272 | None:intergenic | 30.0% |
! | AAGATGTATCTGAGAAGTAT+AGG | - | chr1.2:76049520-76049539 | None:intergenic | 30.0% |
! | ATCGCCTTTATTATGGTTTT+CGG | + | chr1.2:76054333-76054352 | MS.gene34430:CDS | 30.0% |
! | ATGAGAGAACTTCCATTTTA+TGG | + | chr1.2:76053070-76053089 | MS.gene34430:intron | 30.0% |
! | ATTTTCATTGATAGGGAGAA+TGG | + | chr1.2:76054392-76054411 | MS.gene34430:CDS | 30.0% |
! | CACATTTCTGTATTTCTACA+AGG | - | chr1.2:76051550-76051569 | None:intergenic | 30.0% |
! | CTGGATATTCAAGTGAATTT+TGG | - | chr1.2:76051616-76051635 | None:intergenic | 30.0% |
! | TACTTCTTAGCCATTCTTTT+TGG | + | chr1.2:76049483-76049502 | MS.gene34430:intron | 30.0% |
!! | AAATAGCCATTAGTCTTACT+CGG | - | chr1.2:76049144-76049163 | None:intergenic | 30.0% |
!! | ATTGTTCTACTTTTGGCAAT+TGG | + | chr1.2:76051587-76051606 | MS.gene34430:intron | 30.0% |
!! | GAAGAAATTAAAGGCATTTC+AGG | + | chr1.2:76051937-76051956 | MS.gene34430:CDS | 30.0% |
!! | GTCATTTGTTGTTACTTCAT+AGG | + | chr1.2:76051195-76051214 | MS.gene34430:intron | 30.0% |
!!! | ACTATCTTTTAACTTCGTGT+TGG | - | chr1.2:76050797-76050816 | None:intergenic | 30.0% |
!!! | AGGAGTGCTTCTAAATTTTA+CGG | - | chr1.2:76050519-76050538 | None:intergenic | 30.0% |
!!! | CTATCTTTTAACTTCGTGTT+GGG | - | chr1.2:76050796-76050815 | None:intergenic | 30.0% |
!!! | TTGCCATTTTTCTCATTTTC+TGG | - | chr1.2:76051914-76051933 | None:intergenic | 30.0% |
!!! | TTTGTTTGTTTTACATGCAG+TGG | + | chr1.2:76051815-76051834 | MS.gene34430:intron | 30.0% |
AACAGTGAATGCACTAAATC+AGG | - | chr1.2:76049286-76049305 | None:intergenic | 35.0% | |
AACTCAACAGTTTGTAGTGA+AGG | + | chr1.2:76050328-76050347 | MS.gene34430:intron | 35.0% | |
AACTGTGATTCTCAAGTCTA+GGG | - | chr1.2:76054172-76054191 | None:intergenic | 35.0% | |
ATAAGGTCTTTCTCAATGGA+TGG | - | chr1.2:76051174-76051193 | None:intergenic | 35.0% | |
ATCCATTGAGAAAGACCTTA+TGG | + | chr1.2:76051173-76051192 | MS.gene34430:intron | 35.0% | |
ATCTGATAGCAAGTAATTGC+TGG | + | chr1.2:76050837-76050856 | MS.gene34430:intron | 35.0% | |
ATGCTTGGTCATTTATCAGA+TGG | + | chr1.2:76051047-76051066 | MS.gene34430:intron | 35.0% | |
ATTTGCCATTCACTTGACAT+TGG | + | chr1.2:76051354-76051373 | MS.gene34430:intron | 35.0% | |
CAGCTAATTTCTCATAGACA+TGG | - | chr1.2:76049715-76049734 | None:intergenic | 35.0% | |
CTACAAGAACAGATAGATAC+GGG | - | chr1.2:76049026-76049045 | None:intergenic | 35.0% | |
CTACGATATTGGATACTTGA+TGG | - | chr1.2:76049442-76049461 | None:intergenic | 35.0% | |
CTCAAGAAAATGAAGGAACA+TGG | + | chr1.2:76052098-76052117 | MS.gene34430:CDS | 35.0% | |
CTCAATTGGTAGGGATATTA+CGG | - | chr1.2:76050241-76050260 | None:intergenic | 35.0% | |
GACAAGGAGATTGTTCATTT+AGG | + | chr1.2:76053157-76053176 | MS.gene34430:intron | 35.0% | |
GATTGATATGTTCTAACTGC+AGG | + | chr1.2:76054037-76054056 | MS.gene34430:intron | 35.0% | |
GCATGAAAATGTCAGAAAGA+AGG | - | chr1.2:76054268-76054287 | None:intergenic | 35.0% | |
GTGAAATTTCAATCCATCAG+TGG | + | chr1.2:76052497-76052516 | MS.gene34430:intron | 35.0% | |
GTGATCCGTATACAATTTCT+TGG | - | chr1.2:76053191-76053210 | None:intergenic | 35.0% | |
GTGGTGATTTCTCAAAATCA+TGG | + | chr1.2:76052866-76052885 | MS.gene34430:intron | 35.0% | |
GTTGTATGGAAATCATGTAG+TGG | - | chr1.2:76050425-76050444 | None:intergenic | 35.0% | |
TAACCAATGGACACAAAATC+TGG | - | chr1.2:76053213-76053232 | None:intergenic | 35.0% | |
TACAAGAACAGATAGATACG+GGG | - | chr1.2:76049025-76049044 | None:intergenic | 35.0% | |
TATAACTTCCCCACCTATAT+CGG | - | chr1.2:76049687-76049706 | None:intergenic | 35.0% | |
TATTTGCGTGTTCGATGTAA+CGG | + | chr1.2:76049159-76049178 | MS.gene34430:CDS | 35.0% | |
TCCATTATGTGTGTAACCAA+TGG | - | chr1.2:76053226-76053245 | None:intergenic | 35.0% | |
TCTCCCTATCAATGAAAATG+GGG | - | chr1.2:76054391-76054410 | None:intergenic | 35.0% | |
TCTGTAAAGAAGAGATGAAG+AGG | + | chr1.2:76052995-76053014 | MS.gene34430:intron | 35.0% | |
TGATGCTCTCAAGAAAATGA+AGG | + | chr1.2:76052091-76052110 | MS.gene34430:CDS | 35.0% | |
TGCTAGGATTACTATCAATG+GGG | + | chr1.2:76051329-76051348 | MS.gene34430:intron | 35.0% | |
TGCTAGGATTATTATCAGTG+GGG | + | chr1.2:76050883-76050902 | MS.gene34430:intron | 35.0% | |
TGTCAATTTCTTCAGCTAAC+CGG | - | chr1.2:76052151-76052170 | None:intergenic | 35.0% | |
TTAAACTAGCATCAGATGCT+TGG | + | chr1.2:76051470-76051489 | MS.gene34430:intron | 35.0% | |
TTCTTTGGTTGCAAAGATTC+TGG | + | chr1.2:76051720-76051739 | MS.gene34430:intron | 35.0% | |
TTGTGTCGAAACAATATGCT+AGG | + | chr1.2:76050867-76050886 | MS.gene34430:intron | 35.0% | |
TTTGCCATTCACTTGACATT+GGG | + | chr1.2:76051355-76051374 | MS.gene34430:intron | 35.0% | |
! | ACAGTTATCTCCTTGTTGTA+TGG | - | chr1.2:76050439-76050458 | None:intergenic | 35.0% |
! | AGTGCTTCTAAATTTTACGG+AGG | - | chr1.2:76050516-76050535 | None:intergenic | 35.0% |
! | ATGGATATGTTGTCATTTGC+TGG | + | chr1.2:76052311-76052330 | MS.gene34430:CDS | 35.0% |
! | ATTTTCATGCCAACCTATGA+TGG | + | chr1.2:76054278-76054297 | MS.gene34430:CDS | 35.0% |
! | ATTTTCCATTCGATTGACCT+TGG | + | chr1.2:76050908-76050927 | MS.gene34430:intron | 35.0% |
! | CTAAATTTTACGGAGGAAGT+TGG | - | chr1.2:76050509-76050528 | None:intergenic | 35.0% |
! | GATACTTGATGGGTATGTAT+TGG | - | chr1.2:76049431-76049450 | None:intergenic | 35.0% |
! | TAGCAATCTTGATGGTATAG+TGG | + | chr1.2:76052791-76052810 | MS.gene34430:intron | 35.0% |
! | TCCATTGGTTACACACATAA+TGG | + | chr1.2:76053222-76053241 | MS.gene34430:intron | 35.0% |
! | TGGATATGTTGTCATTTGCT+GGG | + | chr1.2:76052312-76052331 | MS.gene34430:CDS | 35.0% |
! | TGTAATTTGCAACTCTTTCG+TGG | + | chr1.2:76052659-76052678 | MS.gene34430:intron | 35.0% |
! | TTGTTTCTTTGTCTGGCAAA+TGG | + | chr1.2:76053945-76053964 | MS.gene34430:intron | 35.0% |
! | TTTCTTACCAAGGGTACATT+TGG | + | chr1.2:76052747-76052766 | MS.gene34430:intron | 35.0% |
! | TTTTCCATTCGATTGACCTT+GGG | + | chr1.2:76050909-76050928 | MS.gene34430:intron | 35.0% |
!! | AACTTATAGGAGCATCTCTA+GGG | - | chr1.2:76052061-76052080 | None:intergenic | 35.0% |
!! | ACCCTTTAAGGTGAAATAGT+GGG | + | chr1.2:76050183-76050202 | MS.gene34430:intron | 35.0% |
!! | AGTGACAGTGGATTAGAATA+CGG | - | chr1.2:76053321-76053340 | None:intergenic | 35.0% |
!! | AGTGGATTAGAATACGGAAT+TGG | - | chr1.2:76053315-76053334 | None:intergenic | 35.0% |
!! | GTGGATTAGAATACGGAATT+GGG | - | chr1.2:76053314-76053333 | None:intergenic | 35.0% |
!! | TCAATCCATTTTTCGATCAG+AGG | + | chr1.2:76048837-76048856 | MS.gene34430:CDS | 35.0% |
!!! | TGTTTTTGTTTTGGACCTCT+TGG | + | chr1.2:76051657-76051676 | MS.gene34430:intron | 35.0% |
AAATGTGCTGCACATCAACT+GGG | - | chr1.2:76053468-76053487 | None:intergenic | 40.0% | |
AACTACAACAGATCCACTGA+TGG | - | chr1.2:76052513-76052532 | None:intergenic | 40.0% | |
AACTTTGCAAACAACCTCCT+TGG | + | chr1.2:76054308-76054327 | MS.gene34430:CDS | 40.0% | |
AAGGAGTTTGCATCCAATTC+AGG | - | chr1.2:76049861-76049880 | None:intergenic | 40.0% | |
AATTGGATGCAAACTCCTTC+TGG | + | chr1.2:76049862-76049881 | MS.gene34430:CDS | 40.0% | |
ACAAGCAGCCTCATAAATTG+TGG | + | chr1.2:76052847-76052866 | MS.gene34430:intron | 40.0% | |
ACGTACCTCTGATCGAAAAA+TGG | - | chr1.2:76048845-76048864 | None:intergenic | 40.0% | |
AGATCCGTTTAGAAGAGCTT+TGG | + | chr1.2:76048945-76048964 | MS.gene34430:intron | 40.0% | |
AGCACTTCATTAGAACACTG+AGG | + | chr1.2:76051861-76051880 | MS.gene34430:CDS | 40.0% | |
AGGTTGTTTGCAAAGTTGCT+TGG | - | chr1.2:76054305-76054324 | None:intergenic | 40.0% | |
ATAACCATACGGTCTCTCAA+TGG | - | chr1.2:76050732-76050751 | None:intergenic | 40.0% | |
CACTGTAATGCATTCACTAC+AGG | - | chr1.2:76050539-76050558 | None:intergenic | 40.0% | |
CATAATAAAGGCGATGACCA+AGG | - | chr1.2:76054328-76054347 | None:intergenic | 40.0% | |
CATCTCAAACCGAAGATGTA+TGG | - | chr1.2:76052294-76052313 | None:intergenic | 40.0% | |
CCATTTGCATGTTCTTAGCA+AGG | + | chr1.2:76050987-76051006 | MS.gene34430:intron | 40.0% | |
CCCCACTATTTCACCTTAAA+GGG | - | chr1.2:76050187-76050206 | None:intergenic | 40.0% | |
CCTTCATGTCCATACATCTT+CGG | + | chr1.2:76052282-76052301 | MS.gene34430:CDS | 40.0% | |
CCTTGCTAAGAACATGCAAA+TGG | - | chr1.2:76050990-76051009 | None:intergenic | 40.0% | |
CGAAGATGTATGGACATGAA+GGG | - | chr1.2:76052284-76052303 | None:intergenic | 40.0% | |
CTAGAGATGCTCCTATAAGT+TGG | + | chr1.2:76052060-76052079 | MS.gene34430:CDS | 40.0% | |
CTAGGGAACAAACTTCGAAA+TGG | - | chr1.2:76054155-76054174 | None:intergenic | 40.0% | |
CTCCCTATCAATGAAAATGG+GGG | - | chr1.2:76054390-76054409 | None:intergenic | 40.0% | |
CTTGGTCATCGCCTTTATTA+TGG | + | chr1.2:76054326-76054345 | MS.gene34430:CDS | 40.0% | |
CTTTCTCAATGGATGGTCTA+AGG | - | chr1.2:76051167-76051186 | None:intergenic | 40.0% | |
GAACTGTGATTCTCAAGTCT+AGG | - | chr1.2:76054173-76054192 | None:intergenic | 40.0% | |
GACCATAAGGTCTTTCTCAA+TGG | - | chr1.2:76051178-76051197 | None:intergenic | 40.0% | |
GATATGTTCTAACTGCAGGT+TGG | + | chr1.2:76054041-76054060 | MS.gene34430:intron | 40.0% | |
GCATTTGCATGTTCTTAGCA+AGG | + | chr1.2:76051425-76051444 | MS.gene34430:intron | 40.0% | |
GCTCAACATCATAGATACCA+TGG | - | chr1.2:76051844-76051863 | None:intergenic | 40.0% | |
GGCTAGAAATTCACCCTTTA+AGG | + | chr1.2:76050171-76050190 | MS.gene34430:intron | 40.0% | |
GGTTGTTTGCAAAGTTGCTT+GGG | - | chr1.2:76054304-76054323 | None:intergenic | 40.0% | |
GTAGCTACTAGCAATCTTGA+TGG | + | chr1.2:76052783-76052802 | MS.gene34430:intron | 40.0% | |
GTGAAGGATAATGCTTGTTC+TGG | + | chr1.2:76050344-76050363 | MS.gene34430:intron | 40.0% | |
TAAAGATACAGCCAAACGCT+CGG | - | chr1.2:76053583-76053602 | None:intergenic | 40.0% | |
TAAATGTGCTGCACATCAAC+TGG | - | chr1.2:76053469-76053488 | None:intergenic | 40.0% | |
TAACTCTACACCTCAACCTT+TGG | - | chr1.2:76052184-76052203 | None:intergenic | 40.0% | |
TACCAATTGAGCTAAGCTCA+CGG | + | chr1.2:76050250-76050269 | MS.gene34430:intron | 40.0% | |
TCATCAACTGACAGTACACT+TGG | - | chr1.2:76053139-76053158 | None:intergenic | 40.0% | |
TCCCCACTATTTCACCTTAA+AGG | - | chr1.2:76050188-76050207 | None:intergenic | 40.0% | |
TGAGCTTAGCTCAATTGGTA+GGG | - | chr1.2:76050250-76050269 | None:intergenic | 40.0% | |
TGCTCCAAAGCTCTTCTAAA+CGG | - | chr1.2:76048952-76048971 | None:intergenic | 40.0% | |
TTGACAATCCTGAGTACCAA+AGG | + | chr1.2:76052165-76052184 | MS.gene34430:CDS | 40.0% | |
TTTACATGCAGTGGTTTCCA+TGG | + | chr1.2:76051824-76051843 | MS.gene34430:intron | 40.0% | |
! | AGAGTAAAAGGACTTTGGAG+TGG | - | chr1.2:76052567-76052586 | None:intergenic | 40.0% |
! | ATCTTACTCCCTTTTCACAC+CGG | + | chr1.2:76052129-76052148 | MS.gene34430:CDS | 40.0% |
! | CATACATCTTCGGTTTGAGA+TGG | + | chr1.2:76052292-76052311 | MS.gene34430:CDS | 40.0% |
! | TCACCAGATTTTGTGTCCAT+TGG | + | chr1.2:76053207-76053226 | MS.gene34430:intron | 40.0% |
! | TGCCCCCATTTTCATTGATA+GGG | + | chr1.2:76054385-76054404 | MS.gene34430:CDS | 40.0% |
! | TTCAGAATCTTTTGCTCCTC+AGG | - | chr1.2:76053772-76053791 | None:intergenic | 40.0% |
! | TTGCCCCCATTTTCATTGAT+AGG | + | chr1.2:76054384-76054403 | MS.gene34430:CDS | 40.0% |
!! | ACTTATAGGAGCATCTCTAG+GGG | - | chr1.2:76052060-76052079 | None:intergenic | 40.0% |
!! | ATGAGTGCTGATCAAAGAGT+AGG | + | chr1.2:76053615-76053634 | MS.gene34430:intron | 40.0% |
!! | CAACTTATAGGAGCATCTCT+AGG | - | chr1.2:76052062-76052081 | None:intergenic | 40.0% |
!! | CACCCTTTAAGGTGAAATAG+TGG | + | chr1.2:76050182-76050201 | MS.gene34430:intron | 40.0% |
!! | CCCTTTAAGGTGAAATAGTG+GGG | + | chr1.2:76050184-76050203 | MS.gene34430:intron | 40.0% |
!! | GATGTTTGACAGAAGCATTC+AGG | - | chr1.2:76054524-76054543 | None:intergenic | 40.0% |
!! | TGGGTTTTGACAATTCTACC+AGG | + | chr1.2:76054081-76054100 | MS.gene34430:CDS | 40.0% |
!! | TGTACTGTCAGTTGATGACA+AGG | + | chr1.2:76053141-76053160 | MS.gene34430:intron | 40.0% |
!!! | GGTCTTATTTTGCGTGCATT+GGG | + | chr1.2:76054062-76054081 | MS.gene34430:CDS | 40.0% |
!!! | TGGTCTTATTTTGCGTGCAT+TGG | + | chr1.2:76054061-76054080 | MS.gene34430:CDS | 40.0% |
AAAGATACAGCCAAACGCTC+GGG | - | chr1.2:76053582-76053601 | None:intergenic | 45.0% | |
AAAGTTGCTTGGGCCATCAT+AGG | - | chr1.2:76054294-76054313 | None:intergenic | 45.0% | |
AATAAAGGCGATGACCAAGG+AGG | - | chr1.2:76054325-76054344 | None:intergenic | 45.0% | |
ACCAATTGAGCTAAGCTCAC+GGG | + | chr1.2:76050251-76050270 | MS.gene34430:intron | 45.0% | |
ACCAGGATATATCTTGCAGC+TGG | + | chr1.2:76054098-76054117 | MS.gene34430:CDS | 45.0% | |
ATACCTGTCATCATGCCAGA+AGG | - | chr1.2:76049880-76049899 | None:intergenic | 45.0% | |
ATATCAAACACAGCTGGAGC+CGG | - | chr1.2:76052929-76052948 | None:intergenic | 45.0% | |
ATCCTGAGTACCAAAGGTTG+AGG | + | chr1.2:76052171-76052190 | MS.gene34430:CDS | 45.0% | |
ATCGGAGGATCAGGATTCAA+AGG | + | chr1.2:76048730-76048749 | MS.gene34430:CDS | 45.0% | |
ATGAAGAGGTTGTCGCAACT+TGG | + | chr1.2:76053009-76053028 | MS.gene34430:intron | 45.0% | |
CAGCTGGAGAATTGTTTGGT+GGG | + | chr1.2:76054114-76054133 | MS.gene34430:CDS | 45.0% | |
CAGTACACTTGGTCCAATCT+AGG | - | chr1.2:76053128-76053147 | None:intergenic | 45.0% | |
CCGAAGATGTATGGACATGA+AGG | - | chr1.2:76052285-76052304 | None:intergenic | 45.0% | |
CCTAACGGCCTCATCAAAAT+CGG | - | chr1.2:76054426-76054445 | None:intergenic | 45.0% | |
CGATGTGTCTTCCATTCTGA+CGG | - | chr1.2:76048714-76048733 | None:intergenic | 45.0% | |
CGTCAGAATGGAAGACACAT+CGG | + | chr1.2:76048712-76048731 | MS.gene34430:CDS | 45.0% | |
CTAACGGCCTCATCAAAATC+GGG | - | chr1.2:76054425-76054444 | None:intergenic | 45.0% | |
CTTGCAGCTGGAGAATTGTT+TGG | + | chr1.2:76054110-76054129 | MS.gene34430:CDS | 45.0% | |
GAAACGCAAGAATATGCACG+TGG | - | chr1.2:76050482-76050501 | None:intergenic | 45.0% | |
GTAGGGATATTACGGTATGC+CGG | - | chr1.2:76050233-76050252 | None:intergenic | 45.0% | |
GTGAGCTTAGCTCAATTGGT+AGG | - | chr1.2:76050251-76050270 | None:intergenic | 45.0% | |
TAACGGCCTCATCAAAATCG+GGG | - | chr1.2:76054424-76054443 | None:intergenic | 45.0% | |
TACACTAGTGCTGCCTGAAT+TGG | + | chr1.2:76049845-76049864 | MS.gene34430:CDS | 45.0% | |
TAGGGATATTACGGTATGCC+GGG | - | chr1.2:76050232-76050251 | None:intergenic | 45.0% | |
TCAGCTAACCGGTGTGAAAA+GGG | - | chr1.2:76052140-76052159 | None:intergenic | 45.0% | |
TCCAGCTGCAAGATATATCC+TGG | - | chr1.2:76054102-76054121 | None:intergenic | 45.0% | |
TGAAGAGGTTGTCGCAACTT+GGG | + | chr1.2:76053010-76053029 | MS.gene34430:intron | 45.0% | |
TGCACCCAATGTCAAGTGAA+TGG | - | chr1.2:76051362-76051381 | None:intergenic | 45.0% | |
TTCAGAGCCAAATGTACCCT+TGG | - | chr1.2:76052757-76052776 | None:intergenic | 45.0% | |
TTCAGCTAACCGGTGTGAAA+AGG | - | chr1.2:76052141-76052160 | None:intergenic | 45.0% | |
TTGGGTGGACAATTGTCTTC+TGG | - | chr1.2:76054557-76054576 | None:intergenic | 45.0% | |
! | AATGTCGATTGTTGCAGACC+TGG | + | chr1.2:76048682-76048701 | MS.gene34430:intron | 45.0% |
! | AGCTGGAGAATTGTTTGGTG+GGG | + | chr1.2:76054115-76054134 | MS.gene34430:CDS | 45.0% |
! | AGGTGAAATAGTGGGGAATC+TGG | + | chr1.2:76050191-76050210 | MS.gene34430:intron | 45.0% |
! | AGGTTCTGCTGTCGATTACA+TGG | + | chr1.2:76054238-76054257 | MS.gene34430:CDS | 45.0% |
! | GGCGTCGCTTTATATGCAAT+AGG | + | chr1.2:76051773-76051792 | MS.gene34430:intron | 45.0% |
! | GGTGAAATAGTGGGGAATCT+GGG | + | chr1.2:76050192-76050211 | MS.gene34430:intron | 45.0% |
! | GTGAAATAGTGGGGAATCTG+GGG | + | chr1.2:76050193-76050212 | MS.gene34430:intron | 45.0% |
! | GTTGATAAGCTACGTGCACA+AGG | + | chr1.2:76052257-76052276 | MS.gene34430:CDS | 45.0% |
! | TTTCTAGCCACTACGCTACT+TGG | - | chr1.2:76050160-76050179 | None:intergenic | 45.0% |
!! | AAGAGCTTGCTGAGAACACT+AGG | + | chr1.2:76054207-76054226 | MS.gene34430:CDS | 45.0% |
!! | ACGAATCCCCGATTTTGATG+AGG | + | chr1.2:76054415-76054434 | MS.gene34430:CDS | 45.0% |
!! | AGAGCTTGCTGAGAACACTA+GGG | + | chr1.2:76054208-76054227 | MS.gene34430:CDS | 45.0% |
!! | CTTATAGGAGCATCTCTAGG+GGG | - | chr1.2:76052059-76052078 | None:intergenic | 45.0% |
!! | CTTTGGAGCAATGCTGATTC+CGG | + | chr1.2:76048962-76048981 | MS.gene34430:CDS | 45.0% |
!! | TAGCCATTAGTCTTACTCGG+AGG | - | chr1.2:76049141-76049160 | None:intergenic | 45.0% |
!! | TTATAGGAGCATCTCTAGGG+GGG | - | chr1.2:76052058-76052077 | None:intergenic | 45.0% |
!!! | GAGAAGAGGCACCTTTTCTT+TGG | + | chr1.2:76051705-76051724 | MS.gene34430:intron | 45.0% |
!!! | TTATTACTTTTATATTTTTT+CGG | + | chr1.2:76050134-76050153 | MS.gene34430:intron | 5.0% |
AAGTGTGTGCACAACACGTC+TGG | - | chr1.2:76052691-76052710 | None:intergenic | 50.0% | |
ACTCCTTCTGGCATGATGAC+AGG | + | chr1.2:76049874-76049893 | MS.gene34430:CDS | 50.0% | |
AGGGATATTACGGTATGCCG+GGG | - | chr1.2:76050231-76050250 | None:intergenic | 50.0% | |
AGTCAATGGGCATTTGCCGA+TGG | - | chr1.2:76053851-76053870 | None:intergenic | 50.0% | |
AGTGTGTGCACAACACGTCT+GGG | - | chr1.2:76052690-76052709 | None:intergenic | 50.0% | |
CACCTCAACCTTTGGTACTC+AGG | - | chr1.2:76052176-76052195 | None:intergenic | 50.0% | |
CAGAATGGAAGACACATCGG+AGG | + | chr1.2:76048715-76048734 | MS.gene34430:CDS | 50.0% | |
CCAATTGAGCTAAGCTCACG+GGG | + | chr1.2:76050252-76050271 | MS.gene34430:intron | 50.0% | |
CCATACGGTCTCTCAATGGA+TGG | - | chr1.2:76050728-76050747 | None:intergenic | 50.0% | |
CCATCCATTGAGAGACCGTA+TGG | + | chr1.2:76050725-76050744 | MS.gene34430:intron | 50.0% | |
CTAATGCTGTTCTTGCTGCG+CGG | + | chr1.2:76049811-76049830 | MS.gene34430:CDS | 50.0% | |
GCAGCTGGAGAATTGTTTGG+TGG | + | chr1.2:76054113-76054132 | MS.gene34430:CDS | 50.0% | |
GCTCCTCCGAGTAAGACTAA+TGG | + | chr1.2:76049135-76049154 | MS.gene34430:intron | 50.0% | |
TATCAAACACAGCTGGAGCC+GGG | - | chr1.2:76052928-76052947 | None:intergenic | 50.0% | |
TCGGGAGAAACACGCTTATG+AGG | - | chr1.2:76054479-76054498 | None:intergenic | 50.0% | |
TGCACCCAAGGTCAATCGAA+TGG | - | chr1.2:76050916-76050935 | None:intergenic | 50.0% | |
TTACCTCCTCGGGAGTCAAT+GGG | - | chr1.2:76053864-76053883 | None:intergenic | 50.0% | |
TTGCGTGTTCGATGTAACGG+TGG | + | chr1.2:76049162-76049181 | MS.gene34430:CDS | 50.0% | |
TTGCTTGGGCCATCATAGGT+TGG | - | chr1.2:76054290-76054309 | None:intergenic | 50.0% | |
TTTACCTCCTCGGGAGTCAA+TGG | - | chr1.2:76053865-76053884 | None:intergenic | 50.0% | |
! | GGGGCAAGAGCTTTTCTATC+AGG | - | chr1.2:76054371-76054390 | None:intergenic | 50.0% |
! | TTTTCGGCCAAGTAGCGTAG+TGG | + | chr1.2:76050150-76050169 | MS.gene34430:intron | 50.0% |
!! | AGCTTGCTGAGAACACTAGG+GGG | + | chr1.2:76054210-76054229 | MS.gene34430:CDS | 50.0% |
!! | CCGATTTTGATGAGGCCGTT+AGG | + | chr1.2:76054423-76054442 | MS.gene34430:CDS | 50.0% |
!! | GAGCTTGCTGAGAACACTAG+GGG | + | chr1.2:76054209-76054228 | MS.gene34430:CDS | 50.0% |
!! | TTAGTCTTACTCGGAGGAGC+TGG | - | chr1.2:76049135-76049154 | None:intergenic | 50.0% |
AGAGGTTGTCGCAACTTGGG+AGG | + | chr1.2:76053013-76053032 | MS.gene34430:intron | 55.0% | |
AGGTTGTCGCAACTTGGGAG+GGG | + | chr1.2:76053015-76053034 | MS.gene34430:intron | 55.0% | |
ATACGGGGCCAATGAGAACG+CGG | - | chr1.2:76049010-76049029 | None:intergenic | 55.0% | |
ATATTACGGTATGCCGGGGC+TGG | - | chr1.2:76050227-76050246 | None:intergenic | 55.0% | |
CCAAACGCTCGGGACATAAC+AGG | - | chr1.2:76053572-76053591 | None:intergenic | 55.0% | |
CCATTCTGACGGTGAAGTCC+AGG | - | chr1.2:76048703-76048722 | None:intergenic | 55.0% | |
CCCCGTGAGCTTAGCTCAAT+TGG | - | chr1.2:76050255-76050274 | None:intergenic | 55.0% | |
CCTGGACTTCACCGTCAGAA+TGG | + | chr1.2:76048700-76048719 | MS.gene34430:CDS | 55.0% | |
CCTGTTATGTCCCGAGCGTT+TGG | + | chr1.2:76053569-76053588 | MS.gene34430:intron | 55.0% | |
GAGGTTGTCGCAACTTGGGA+GGG | + | chr1.2:76053014-76053033 | MS.gene34430:intron | 55.0% | |
GGAAGACACATCGGAGGATC+AGG | + | chr1.2:76048721-76048740 | MS.gene34430:CDS | 55.0% | |
TATTACGGTATGCCGGGGCT+GGG | - | chr1.2:76050226-76050245 | None:intergenic | 55.0% | |
TGCTGAGAACACTAGGGGGT+TGG | + | chr1.2:76054214-76054233 | MS.gene34430:CDS | 55.0% | |
! | GGAGGGGTTTGGAGCTAGTA+AGG | + | chr1.2:76053031-76053050 | MS.gene34430:intron | 55.0% |
!! | CAAATGCCCATTGACTCCCG+AGG | + | chr1.2:76053855-76053874 | MS.gene34430:CDS | 55.0% |
!! | GCAATGCTGATTCCGGTGGT+TGG | + | chr1.2:76048969-76048988 | MS.gene34430:CDS | 55.0% |
!! | TGGAGCAATGCTGATTCCGG+TGG | + | chr1.2:76048965-76048984 | MS.gene34430:CDS | 55.0% |
ATTACGGTATGCCGGGGCTG+GGG | - | chr1.2:76050225-76050244 | None:intergenic | 60.0% | |
CATCGTCGCCGCGTTCTCAT+TGG | + | chr1.2:76048999-76049018 | MS.gene34430:CDS | 60.0% | |
GTCGCAACTTGGGAGGGGTT+TGG | + | chr1.2:76053020-76053039 | MS.gene34430:intron | 60.0% | |
TGAGAACGCGGCGACGATGA+CGG | - | chr1.2:76048998-76049017 | None:intergenic | 60.0% | |
! | GAGAACACTAGGGGGTTGGC+AGG | + | chr1.2:76054218-76054237 | MS.gene34430:CDS | 60.0% |
!! | ATGCCCATTGACTCCCGAGG+AGG | + | chr1.2:76053858-76053877 | MS.gene34430:CDS | 60.0% |
!! | TAGGAGCATCTCTAGGGGGG+CGG | - | chr1.2:76052055-76052074 | None:intergenic | 60.0% |
CACAGCTGGAGCCGGGATCT+AGG | - | chr1.2:76052921-76052940 | None:intergenic | 65.0% | |
TGGGGTTCAAACCCCAGCCC+CGG | + | chr1.2:76050211-76050230 | MS.gene34430:intron | 65.0% | |
! | CGATGACGGTCGCCAACCAC+CGG | - | chr1.2:76048984-76049003 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 76048611 | 76054646 | 76048611 | ID=MS.gene34430 |
chr1.2 | mRNA | 76048611 | 76054646 | 76048611 | ID=MS.gene34430.t1;Parent=MS.gene34430 |
chr1.2 | exon | 76048611 | 76048618 | 76048611 | ID=MS.gene34430.t1.exon1;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76048611 | 76048618 | 76048611 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76048699 | 76048858 | 76048699 | ID=MS.gene34430.t1.exon2;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76048699 | 76048858 | 76048699 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76048947 | 76049025 | 76048947 | ID=MS.gene34430.t1.exon3;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76048947 | 76049025 | 76048947 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76049136 | 76049206 | 76049136 | ID=MS.gene34430.t1.exon4;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76049136 | 76049206 | 76049136 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76049807 | 76049895 | 76049807 | ID=MS.gene34430.t1.exon5;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76049807 | 76049895 | 76049807 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76051835 | 76051958 | 76051835 | ID=MS.gene34430.t1.exon6;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76051835 | 76051958 | 76051835 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76052050 | 76052333 | 76052050 | ID=MS.gene34430.t1.exon7;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76052050 | 76052333 | 76052050 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76053750 | 76053879 | 76053750 | ID=MS.gene34430.t1.exon8;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76053750 | 76053879 | 76053750 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
chr1.2 | exon | 76054059 | 76054646 | 76054059 | ID=MS.gene34430.t1.exon9;Parent=MS.gene34430.t1 |
chr1.2 | CDS | 76054059 | 76054646 | 76054059 | ID=cds.MS.gene34430.t1;Parent=MS.gene34430.t1 |
Gene Sequence |
Protein sequence |