AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052279


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052279.t1 MTR_4g075520 95.496 2065 93 0 1 2065 1 2065 0.0 4045
MS.gene052279.t1 MTR_4g075520 94.383 2065 93 1 1 2065 1 2042 0.0 3982
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052279.t1 AT4G30150 35.415 2146 1136 48 1 2065 33 2009 0.0 1123
MS.gene052279.t1 AT4G30150 35.923 2085 1099 45 49 2065 54 1969 0.0 1122

Find 357 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGAAAATTTGGATTTA+TGG 0.073503 4.2:+33381580 MS.gene052279:CDS
CATTGCTATAGCTTTCTTTC+TGG 0.095319 4.2:-33382039 None:intergenic
TTCAACATCACTGCCAATTT+TGG 0.159178 4.2:-33386355 None:intergenic
GAGAAGATTTGGTGAATTTA+TGG 0.168885 4.2:+33382597 MS.gene052279:CDS
ATTGAAGTGTTTAACCTTAA+TGG 0.175717 4.2:+33385843 MS.gene052279:CDS
CGCTTTGCACAATGCTAAAA+TGG 0.185578 4.2:-33382993 None:intergenic
TAAAGCACTGCAAAAGATTT+TGG 0.187122 4.2:-33384581 None:intergenic
GACTGTAGAGATTAACTATT+TGG 0.198454 4.2:-33382712 None:intergenic
AATATCGACAGAAGTATTAT+TGG 0.201356 4.2:-33382201 None:intergenic
CCTTCTAATACCACTTCTTT+TGG 0.213566 4.2:-33389250 None:intergenic
GTCCAGCAGCCTCTTCCTTC+AGG 0.215265 4.2:-33383957 None:intergenic
AGATTGGCTTCTCAAAATTC+TGG 0.215269 4.2:-33386197 None:intergenic
GAAATTGAGTATGAAGTTAT+TGG 0.217511 4.2:+33382575 MS.gene052279:CDS
GAAAATATTAGTGATTTAAA+TGG 0.219011 4.2:-33385640 None:intergenic
ATTGATATTGTGTCCAAAAT+TGG 0.223791 4.2:+33386342 MS.gene052279:CDS
CAGAGCCCACATATATTTAA+TGG 0.226377 4.2:+33387832 MS.gene052279:CDS
TTTCAAATTGTCAGCCATTA+AGG 0.230407 4.2:-33385857 None:intergenic
TTAATGGAAGTGATCCTATT+TGG 0.238227 4.2:+33381823 MS.gene052279:CDS
TCAAAATTCTATCTAAAGTA+TGG 0.245737 4.2:+33383805 MS.gene052279:CDS
AACCCACTCACTTGCCCTTC+TGG 0.250464 4.2:-33383169 None:intergenic
GTGCAAAGGTTTAGTTTCTT+TGG 0.257750 4.2:+33384050 MS.gene052279:CDS
GGTTTATATATTTCAGTCTA+TGG 0.263651 4.2:+33383849 MS.gene052279:CDS
CCCCAGTCTTTCTTCCCATT+TGG 0.267667 4.2:-33381273 None:intergenic
GAATTCTTTCAACTGCTTCT+TGG 0.268890 4.2:-33384187 None:intergenic
TGAATTACAAAACAGTTAAC+TGG 0.275445 4.2:-33384730 None:intergenic
GGCCTTAAGGTATATATTAA+TGG 0.276150 4.2:+33385480 MS.gene052279:CDS
TGGGTTGTCAAATGAAAATT+TGG 0.287369 4.2:+33381572 MS.gene052279:CDS
GAGTTGCATTGTCGGGTTAA+TGG 0.289996 4.2:+33381807 MS.gene052279:CDS
AGTTGCAATGGGCTATCTTT+TGG 0.291440 4.2:+33382553 MS.gene052279:CDS
ATGATTATTGAATTTGTTTC+AGG 0.291696 4.2:+33387128 MS.gene052279:CDS
CTCCGATGATTCTTCTCCTT+TGG 0.294047 4.2:+33383828 MS.gene052279:CDS
GATGCAATTTGGAAGGCTTT+TGG 0.299495 4.2:-33380574 None:intergenic
CTCTGCCATCAATTGTAATA+TGG 0.302080 4.2:+33382637 MS.gene052279:CDS
AAAACTTTCAAATCCTTTCC+TGG 0.305548 4.2:-33381745 None:intergenic
AGCTTCTATCAGAACCTAAC+TGG 0.308730 4.2:+33384653 MS.gene052279:CDS
TTGTTACAAAGCTTGGTAAA+AGG 0.310120 4.2:+33386465 MS.gene052279:CDS
GTATCTAGGCAAATAGTATC+TGG 0.313127 4.2:-33383460 None:intergenic
ATATTCTGCCTTTGAGTTGA+TGG 0.313310 4.2:+33383699 MS.gene052279:CDS
AACTATTGTGTACCATTATA+AGG 0.313376 4.2:+33388163 MS.gene052279:CDS
TCAACAGTTTCTCCTATAAT+AGG 0.313569 4.2:-33383502 None:intergenic
CATAGAATTTCTAAAGCTTC+TGG 0.314917 4.2:+33388027 MS.gene052279:CDS
TGAAGTTATTGGAGAAGATT+TGG 0.316091 4.2:+33382586 MS.gene052279:CDS
ATTTGCCATATTACAATTGA+TGG 0.316997 4.2:-33382642 None:intergenic
GTAAAACTCTTGACGTTAAG+AGG 0.318463 4.2:-33384811 None:intergenic
ATCTTAAACTTATCTCTGTT+TGG 0.326016 4.2:+33386216 MS.gene052279:CDS
TACTGTTCTTCTTAATTGCT+TGG 0.326160 4.2:+33388424 MS.gene052279:CDS
AAACAGCAAAAGGATATATT+TGG 0.328486 4.2:+33389171 MS.gene052279:CDS
ACCTGAATGCTCAGTTTCTA+AGG 0.331942 4.2:+33386254 MS.gene052279:CDS
AAATTAATTTCATAACAAAA+AGG 0.335963 4.2:-33383783 None:intergenic
TCTGCAGTTTCGTGCTTTAG+TGG 0.336863 4.2:+33385976 MS.gene052279:CDS
GCCTTAGAAACTGAGCATTC+AGG 0.337800 4.2:-33386255 None:intergenic
CTTAGTAAAATAGCTACTTC+AGG 0.339370 4.2:-33386495 None:intergenic
AAACTTCGTTGCCAGTCTTT+TGG 0.339651 4.2:+33386401 MS.gene052279:CDS
AAATGAAAATTTGGATTTAT+GGG 0.345524 4.2:+33381581 MS.gene052279:CDS
GAAACGACTGGGGCAGTGCT+TGG 0.346301 4.2:+33381606 MS.gene052279:CDS
ATGATATATCTGAAACTCTT+AGG 0.346955 4.2:+33383209 MS.gene052279:CDS
AAACTCTACAATGGTCGATT+TGG 0.348553 4.2:+33380496 None:intergenic
CTTTCAAATCCTTTCCTGGC+TGG 0.352730 4.2:-33381741 None:intergenic
ACCAATCTCCCTGTCCAAAT+AGG 0.354487 4.2:-33381837 None:intergenic
TGAGGTTGTTTGTCTCTTGC+CGG 0.354654 4.2:+33385455 MS.gene052279:CDS
TCTTCAACTATTCCTGCATT+GGG 0.354928 4.2:+33382686 MS.gene052279:CDS
ATATTCCATGGCTTTATAGA+TGG 0.356038 4.2:-33383143 None:intergenic
TGATTCCATTTGTTGATTTG+AGG 0.357586 4.2:-33384075 None:intergenic
GTTGACAACATGCAACAAAT+AGG 0.361703 4.2:-33388143 None:intergenic
TGACGGAGTTGAGGCATATA+TGG 0.362356 4.2:+33381317 MS.gene052279:CDS
AACAGAGATAAGTTTAAGAT+TGG 0.365608 4.2:-33386213 None:intergenic
GCCTTAAGGTATATATTAAT+GGG 0.369043 4.2:+33385481 MS.gene052279:CDS
TTTAAAATGTTCTTCTGAAC+TGG 0.370217 4.2:-33381481 None:intergenic
CTTAAGAACTCAACCCAGTT+AGG 0.372084 4.2:-33384667 None:intergenic
CAAATTCACATGAGGGCAAT+AGG 0.372966 4.2:+33386774 MS.gene052279:CDS
AGAGATGATTGTACCTTTCA+AGG 0.373516 4.2:-33384921 None:intergenic
TCATATGCCTTGTTGTTCAT+TGG 0.375295 4.2:+33385679 MS.gene052279:CDS
GGATGATTCCCCGGTGCCAT+TGG 0.377748 4.2:+33386428 MS.gene052279:CDS
TCCTATTTGGACAGGGAGAT+TGG 0.379316 4.2:+33381836 MS.gene052279:CDS
AAACTTGCCTGTTTCTCAAA+AGG 0.382844 4.2:+33385891 MS.gene052279:CDS
TAAACCTTTGTTACAAAGCT+TGG 0.385069 4.2:+33386458 MS.gene052279:CDS
TGTCGGGTGAGTTGCATTGT+CGG 0.386312 4.2:+33381799 MS.gene052279:CDS
CCTTGGGCGATGCCTTATAA+TGG 0.386417 4.2:-33388175 None:intergenic
ATATCGGTATATTCAGGATA+TGG 0.387235 4.2:+33389225 MS.gene052279:CDS
CTGATATTCACTCGCTCTGC+TGG 0.387960 4.2:-33388093 None:intergenic
TGCAGCTGGCATTGATTGCT+TGG 0.389283 4.2:+33387103 MS.gene052279:CDS
CTGGGTATCATGTAAACTTT+CGG 0.389365 4.2:-33386178 None:intergenic
ATCTTCAACTATTCCTGCAT+TGG 0.393099 4.2:+33382685 MS.gene052279:CDS
GATGATTCCCCGGTGCCATT+GGG 0.394283 4.2:+33386429 MS.gene052279:CDS
CAGTCTTTCTTCCCATTTGG+AGG 0.395106 4.2:-33381270 None:intergenic
TGTGGTATACTGAAGTCTAT+TGG 0.395198 4.2:+33382332 MS.gene052279:CDS
CAAATCCTTTCCTGGCTGGA+TGG 0.396358 4.2:-33381737 None:intergenic
TGGTCCATCAGATTCATTCA+TGG 0.396862 4.2:+33388047 MS.gene052279:CDS
GTGGGGCCTAACATCTTCGC+TGG 0.397596 4.2:+33386005 MS.gene052279:CDS
GCTATTGCCTTCAGTTATAG+TGG 0.398943 4.2:-33383347 None:intergenic
TGCTAGGTTATCTTAATGAT+TGG 0.398968 4.2:+33381229 MS.gene052279:CDS
TCTTCAGAGGCTTGTTGACT+TGG 0.400178 4.2:+33383873 MS.gene052279:CDS
AACTACATATCGGTATATTC+AGG 0.400547 4.2:+33389219 MS.gene052279:CDS
AGAGTCGGAACGATGCAATT+TGG 0.401194 4.2:-33380585 None:intergenic
ATATATACCTTAAGGCCTTC+CGG 0.401772 4.2:-33385474 None:intergenic
CCAAAAGAAGTGGTATTAGA+AGG 0.405421 4.2:+33389250 MS.gene052279:CDS
GTGCTTTAGTGGAGTCTTGT+GGG 0.405709 4.2:+33385987 MS.gene052279:CDS
GATTGGCTTCTCAAAATTCT+GGG 0.408839 4.2:-33386196 None:intergenic
ACTTGACTGTCTTTCATGTA+AGG 0.409745 4.2:-33386835 None:intergenic
TCTCTACAGTCAACTTCGTC+AGG 0.409773 4.2:+33382724 MS.gene052279:CDS
TAATCTGCAGGCAGAACTCT+TGG 0.410102 4.2:+33383282 MS.gene052279:CDS
TCTCTTGCCGGAAGGCCTTA+AGG 0.411934 4.2:+33385467 MS.gene052279:CDS
CTCCAAATGGGAAGAAAGAC+TGG 0.412065 4.2:+33381271 MS.gene052279:CDS
TCCAGCAGCCTCTTCCTTCA+GGG 0.412248 4.2:-33383956 None:intergenic
CTTGTTAGCTGTATCGTAGT+TGG 0.413325 4.2:-33382489 None:intergenic
GTATCTGGGCATATAGTATC+TGG 0.413796 4.2:-33383445 None:intergenic
CGCTCTTGATTGTGTTTCGT+TGG 0.417438 4.2:+33381533 MS.gene052279:CDS
AAACGACTGGGGCAGTGCTT+GGG 0.417528 4.2:+33381607 MS.gene052279:CDS
CATATATGGATCTTCGTTGT+TGG 0.419429 4.2:+33381331 MS.gene052279:CDS
CAGGCTTCTTGTAAATGCCT+TGG 0.421981 4.2:+33385387 MS.gene052279:intron
CAAATAGGTTAACTGTGAAT+TGG 0.422156 4.2:-33388128 None:intergenic
TGAGCCATTGCTGCATTTGT+CGG 0.423909 4.2:+33381782 MS.gene052279:CDS
TAACAGCCTTTCAACTGATT+CGG 0.427408 4.2:-33383098 None:intergenic
GTCGGGTGAGTTGCATTGTC+GGG 0.427634 4.2:+33381800 MS.gene052279:CDS
TCCCATTAATATATACCTTA+AGG 0.427724 4.2:-33385482 None:intergenic
AAAATAACCTGTTAAGATCA+AGG 0.427940 4.2:-33380694 None:intergenic
GACTGCTCTCCATTGGTTGA+TGG 0.428505 4.2:+33383241 MS.gene052279:CDS
ACAAAATTGAATCACTTAGA+AGG 0.429865 4.2:-33384326 None:intergenic
ACTATTATTGTGAATATTTG+AGG 0.430994 4.2:+33385437 MS.gene052279:CDS
GTCACGGCTACTCCCGATCC+AGG 0.432269 4.2:+33387874 MS.gene052279:CDS
GCTATAGCAATGGGTAGCTT+AGG 0.432617 4.2:+33382050 MS.gene052279:CDS
ATGCCTCAACTCCGTCAAGC+TGG 0.432782 4.2:-33381311 None:intergenic
AAAACTTGCAAATAGTATCT+AGG 0.434098 4.2:-33383474 None:intergenic
AGGGAGATTGGTGAAGGTGG+TGG 0.434458 4.2:+33381848 MS.gene052279:CDS
ATTCGTTGCCGATAGCCATT+TGG 0.439209 4.2:+33384121 MS.gene052279:CDS
AAACTCAATTTCAAATATGA+AGG 0.440148 4.2:+33389798 MS.gene052279:CDS
AAGATAGGAGATTAAGCAAC+TGG 0.443692 4.2:-33384843 None:intergenic
AAGTCATTATCTGTGATTGT+TGG 0.450978 4.2:+33385586 MS.gene052279:CDS
TACTCTATTCTCGATGGATG+TGG 0.451152 4.2:+33387948 MS.gene052279:CDS
TTGCTTGCCTAAGCAAGCTT+CGG 0.453680 4.2:-33383615 None:intergenic
TTTGACCCAGCGAAGATGTT+AGG 0.454665 4.2:-33386011 None:intergenic
AAGCTACCATTAAATATATG+TGG 0.455114 4.2:-33387838 None:intergenic
ACACTTCAATTCCTCGAGCT+TGG 0.459302 4.2:-33385830 None:intergenic
ATATATGGATCTTCGTTGTT+GGG 0.460318 4.2:+33381332 MS.gene052279:CDS
CCCTTCTGGAATATATTCCA+TGG 0.460490 4.2:-33383155 None:intergenic
CTACTAGTTCCTCCTGGCAC+TGG 0.460772 4.2:-33382176 None:intergenic
GCATTCATTTCAAGCAAAAG+AGG 0.461955 4.2:-33382263 None:intergenic
TCGTTGGTGTTCTCCTCTCA+TGG 0.463063 4.2:+33381549 MS.gene052279:CDS
TCTTTGTTTCTGATGATGTA+AGG 0.463858 4.2:+33384028 MS.gene052279:CDS
GTGGAAGAAGTTCTTTCTCA+TGG 0.464104 4.2:+33381867 MS.gene052279:CDS
GATGCAGATAAAACAGCAAA+AGG 0.464687 4.2:+33389161 MS.gene052279:intron
ATACAGTCAACTAGAATGTC+TGG 0.465406 4.2:-33384264 None:intergenic
TTGACAAGCGAGGAGGCATA+AGG 0.466177 4.2:-33383642 None:intergenic
CGACTCTGCTCAGAAGTCTC+AGG 0.466582 4.2:+33380601 MS.gene052279:CDS
CGTGCTTTAGTGGAGTCTTG+TGG 0.467219 4.2:+33385986 MS.gene052279:CDS
GACTTTGAAAGCCACAAAAC+AGG 0.467227 4.2:-33385568 None:intergenic
TGGCTCCTCAAATCAACAAA+TGG 0.467331 4.2:+33384070 MS.gene052279:CDS
TTAAGATAACCTAGCAGTCT+TGG 0.467560 4.2:-33381222 None:intergenic
CAAATCAACAAATGGAATCA+AGG 0.469741 4.2:+33384078 MS.gene052279:CDS
AACTTGCCTGTTTCTCAAAA+GGG 0.472238 4.2:+33385892 MS.gene052279:CDS
ATTTCGACACTTGTTGCAGC+TGG 0.474227 4.2:+33387089 MS.gene052279:CDS
GGAAGTGATCCTATTTGGAC+AGG 0.477696 4.2:+33381828 MS.gene052279:CDS
TATAGGAGAAACTGTTGATC+GGG 0.478964 4.2:+33383507 MS.gene052279:CDS
TCTAAGGCTAATAGCTCAGC+TGG 0.479993 4.2:+33386270 MS.gene052279:CDS
TGCCTCAACTCCGTCAAGCT+GGG 0.480906 4.2:-33381310 None:intergenic
TTGCCTAAGCAAGCTTCGGC+TGG 0.481928 4.2:-33383611 None:intergenic
CTGACAGTGGTTTCTTCTCG+TGG 0.483199 4.2:+33383737 MS.gene052279:CDS
GAGCCATTGCTGCATTTGTC+GGG 0.483708 4.2:+33381783 MS.gene052279:CDS
CAAGTCTGGCGAGGATTGAA+TGG 0.484610 4.2:-33385524 None:intergenic
TTTGCAGAGATTTGACCAAA+TGG 0.485150 4.2:-33384136 None:intergenic
CATTCAATCCTCGCCAGACT+TGG 0.486247 4.2:+33385525 MS.gene052279:CDS
TTATTCAAACCCAATGGCAC+CGG 0.486892 4.2:-33386438 None:intergenic
TTTGGCTACGGATGATTCCC+CGG 0.486958 4.2:+33386419 MS.gene052279:CDS
GCTGAAGCACCAACCACAAA+AGG 0.488443 4.2:-33381692 None:intergenic
CTCGATGGATGTGGGGCATG+TGG 0.488596 4.2:+33387957 MS.gene052279:CDS
GTTATTAGAATTTACAGAGA+TGG 0.492463 4.2:+33386626 MS.gene052279:CDS
GCTTGAATGAATTGAAAACT+AGG 0.492619 4.2:+33386919 MS.gene052279:CDS
GATTTATGGGTTGAAACGAC+TGG 0.494008 4.2:+33381594 MS.gene052279:CDS
AAGTCTCAGGATCACCAACC+TGG 0.494993 4.2:+33380614 MS.gene052279:CDS
GTGAAAACAGAGGACACATC+TGG 0.495699 4.2:+33382392 MS.gene052279:CDS
AAGGAGGGAAGCAGAAGGTT+GGG 0.495939 4.2:-33383764 None:intergenic
CAAACAGATGCTAAAGATAG+TGG 0.497105 4.2:+33386030 MS.gene052279:CDS
CATGGAGTGGAAGATTGTCC+AGG 0.497692 4.2:-33380632 None:intergenic
GAAACTGTTGATCGGGCTGT+TGG 0.498223 4.2:+33383514 MS.gene052279:CDS
TTACATCCGACATCAAAGAT+AGG 0.498961 4.2:-33384858 None:intergenic
AGAATGGCTGACCCTGGATC+GGG 0.499208 4.2:-33387886 None:intergenic
ACTATTTGGCACCCCAATGC+AGG 0.500003 4.2:-33382698 None:intergenic
TGATTCCGCAAGAAAGTTCA+AGG 0.500369 4.2:+33382094 MS.gene052279:CDS
AGAAAGAAAGCTATAGCAAT+GGG 0.500843 4.2:+33382041 MS.gene052279:CDS
TATTCAAACCCAATGGCACC+GGG 0.500930 4.2:-33386437 None:intergenic
AACGAGACGTTAGTTGCAAT+GGG 0.502961 4.2:+33382542 MS.gene052279:CDS
TCAACTGCTTCTTGGAACCA+TGG 0.504030 4.2:-33384179 None:intergenic
AGTACAAAGACACTGCATAA+AGG 0.505137 4.2:+33386855 MS.gene052279:CDS
TTTGTCTACTATAGAGGCCG+TGG 0.507572 4.2:+33386992 MS.gene052279:CDS
AAAGAAACGCAGATTGTTGT+GGG 0.507704 4.2:-33386656 None:intergenic
TGTTGATCGGGCTGTTGGAA+AGG 0.507914 4.2:+33383519 MS.gene052279:CDS
AATAGATGAAGCTTTAAGAC+CGG 0.508825 4.2:+33389584 MS.gene052279:CDS
GCATTACAAATCACGAATCA+AGG 0.509642 4.2:+33383933 MS.gene052279:CDS
TAACGAGACGTTAGTTGCAA+TGG 0.509724 4.2:+33382541 MS.gene052279:CDS
ACTCTATTCTCGATGGATGT+GGG 0.512905 4.2:+33387949 MS.gene052279:CDS
GATTTAAAGCAACCAGTGCC+AGG 0.513633 4.2:+33382164 MS.gene052279:CDS
AAAGGAGGGAAGCAGAAGGT+TGG 0.514110 4.2:-33383765 None:intergenic
AATATCAATTGCTGATGAAG+TGG 0.514938 4.2:-33386328 None:intergenic
CACTTCAACACACATGAGAA+TGG 0.515639 4.2:-33387902 None:intergenic
CGACAAGTGCTGAGTTGTCG+AGG 0.516847 4.2:-33384693 None:intergenic
GACAGGGAGATTGGTGAAGG+TGG 0.517063 4.2:+33381845 MS.gene052279:CDS
TGTGAGATTTCAATAAAAGC+AGG 0.517374 4.2:-33386597 None:intergenic
CATTGGTTGATGGAAACAAA+TGG 0.519799 4.2:+33383251 MS.gene052279:CDS
AGTCTTTCTTCCCATTTGGA+GGG 0.520207 4.2:-33381269 None:intergenic
GAAAACAAAGATCCATTGAC+TGG 0.520792 4.2:-33383569 None:intergenic
CAGGCAGAACTCTTGGGTAG+AGG 0.521499 4.2:+33383289 MS.gene052279:CDS
GATGAAAGACTGCTCTCCAT+TGG 0.522122 4.2:+33383234 MS.gene052279:CDS
ACATCATCAGAAACAAAGAC+TGG 0.522280 4.2:-33384024 None:intergenic
GCCCTGAAGGAAGAGGCTGC+TGG 0.522560 4.2:+33383955 MS.gene052279:CDS
AATAAATCCATTGTGAATGA+AGG 0.523092 4.2:+33388461 MS.gene052279:CDS
AACTGCTTGATACACAATGA+AGG 0.525348 4.2:-33384233 None:intergenic
GAGAATGGCTGACCCTGGAT+CGG 0.526165 4.2:-33387887 None:intergenic
ATGGCGAAAGATTAATCTGC+AGG 0.527982 4.2:+33383270 MS.gene052279:CDS
GTTGTTTGTCTCTTGCCGGA+AGG 0.527994 4.2:+33385459 MS.gene052279:CDS
AGGCAGAACTCTTGGGTAGA+GGG 0.529422 4.2:+33383290 MS.gene052279:CDS
GTTGATCGGGCTGTTGGAAA+GGG 0.530471 4.2:+33383520 MS.gene052279:CDS
TAAAACTCTTGACGTTAAGA+GGG 0.531191 4.2:-33384810 None:intergenic
TGTATAAACTTTACTTGATG+AGG 0.531218 4.2:-33386742 None:intergenic
TTCTTCTGAACTGGTAGAGA+AGG 0.532490 4.2:-33381472 None:intergenic
CCCTACTTGAGTATTCTAGT+TGG 0.532942 4.2:+33383415 MS.gene052279:CDS
GAAGGCAATAGCAATCTTGT+CGG 0.536380 4.2:+33383358 MS.gene052279:CDS
TTTACCAAGCTTTGTAACAA+AGG 0.537636 4.2:-33386462 None:intergenic
TGGTGTTCTCCTCTCATGGT+GGG 0.538143 4.2:+33381553 MS.gene052279:CDS
ATTTATGGGTTGAAACGACT+GGG 0.540765 4.2:+33381595 MS.gene052279:CDS
TTTATTCCGAATCAGTTGAA+AGG 0.542416 4.2:+33383092 MS.gene052279:CDS
CAGTAACAGAAGCTTCAAGA+TGG 0.544050 4.2:-33388406 None:intergenic
AATTCCCTTGAACTTTCTTG+CGG 0.546561 4.2:-33382099 None:intergenic
CTGGACAATCTTCCACTCCA+TGG 0.546755 4.2:+33380633 MS.gene052279:CDS
AATCAAGGCCCTGAAGGAAG+AGG 0.546769 4.2:+33383948 MS.gene052279:CDS
TAGCATTGTGCAAAGCGCTA+AGG 0.547165 4.2:+33382999 MS.gene052279:CDS
AAGCACTAAAGAATACAGTC+TGG 0.549555 4.2:-33383317 None:intergenic
TTATAGGAGAAACTGTTGAT+CGG 0.551462 4.2:+33383506 MS.gene052279:CDS
AGCACTTGTCGAAAATAAAG+AGG 0.552648 4.2:+33384705 MS.gene052279:CDS
GACCGTGTCCCACGTTGACA+TGG 0.553798 4.2:-33385924 None:intergenic
TTTGAGGCTAAATTTGCTGT+CGG 0.555105 4.2:+33386545 MS.gene052279:CDS
AATCTGCAGGCAGAACTCTT+GGG 0.555473 4.2:+33383283 MS.gene052279:CDS
CACATGAGAATGGCTGACCC+TGG 0.556242 4.2:-33387892 None:intergenic
GCCGTGGAGAGAGCTCTAGT+TGG 0.558849 4.2:+33387008 MS.gene052279:CDS
TGCTTTAGTGGAGTCTTGTG+GGG 0.559125 4.2:+33385988 MS.gene052279:CDS
CTGAAGATTGTTCCATGGAG+TGG 0.559369 4.2:-33380645 None:intergenic
TTGGAGCTACTAGTTCCTCC+TGG 0.559652 4.2:-33382182 None:intergenic
AAAAGAAACGCAGATTGTTG+TGG 0.559893 4.2:-33386657 None:intergenic
CTCTATTCTCGATGGATGTG+GGG 0.560219 4.2:+33387950 MS.gene052279:CDS
TCGGGCTGTTGGAAAGGGCA+AGG 0.561707 4.2:+33383525 MS.gene052279:CDS
ATAAAGAAAGAGTGTTGATG+TGG 0.563000 4.2:+33386055 MS.gene052279:CDS
TTCCAGAAGGGCAAGTGAGT+GGG 0.563279 4.2:+33383167 MS.gene052279:CDS
AGCTACCATTAAATATATGT+GGG 0.564877 4.2:-33387837 None:intergenic
GCTCTAGTTGGAGTACAAGA+AGG 0.565362 4.2:+33387020 MS.gene052279:CDS
ATCATCCGTAGCCAAAAGAC+TGG 0.565762 4.2:-33386412 None:intergenic
CATTTGTTTCCATCAACCAA+TGG 0.566602 4.2:-33383250 None:intergenic
CATCATCAGAAACAAAGACT+GGG 0.566980 4.2:-33384023 None:intergenic
ATACAATTACCAAGACTGCT+AGG 0.567536 4.2:+33381213 MS.gene052279:CDS
TAATCTCCTATCTTTGATGT+CGG 0.567881 4.2:+33384852 MS.gene052279:CDS
TGCCATGTCAACGTGGGACA+CGG 0.568303 4.2:+33385922 MS.gene052279:CDS
CAGAAAGAAAGCTATAGCAA+TGG 0.568832 4.2:+33382040 MS.gene052279:CDS
CTTCAACTATTCCTGCATTG+GGG 0.568852 4.2:+33382687 MS.gene052279:CDS
ATTGATATTTGGGGAAACCA+TGG 0.570155 4.2:+33384162 MS.gene052279:CDS
AATATTCACAATAATAGTCC+CGG 0.571001 4.2:-33385432 None:intergenic
TAAACTTTACTTGATGAGGT+AGG 0.571183 4.2:-33386738 None:intergenic
GCCATGGAATATATTCCAGA+AGG 0.571214 4.2:+33383154 MS.gene052279:CDS
TGTCCAGCCGAAGCTTGCTT+AGG 0.572568 4.2:+33383608 MS.gene052279:CDS
TATCTAGGCAAATAGTATCT+GGG 0.572578 4.2:-33383459 None:intergenic
GCCCCAGCTTGACGGAGTTG+AGG 0.572704 4.2:+33381308 MS.gene052279:CDS
AGGGTCCATCCAGCCAGGAA+AGG 0.572910 4.2:+33381732 MS.gene052279:CDS
GGGAAGAAAGACTGGGGCGA+AGG 0.572985 4.2:+33381279 MS.gene052279:CDS
TCTGATGATGTAAGGTGCAA+AGG 0.573138 4.2:+33384036 MS.gene052279:CDS
AATTTGGTAGGTCCAGTCAA+TGG 0.575075 4.2:+33383557 MS.gene052279:CDS
TCGGAACGATGCAATTTGGA+AGG 0.578033 4.2:-33380581 None:intergenic
CCATTATAAGGCATCGCCCA+AGG 0.579165 4.2:+33388175 MS.gene052279:CDS
TTGGTGTTCTCCTCTCATGG+TGG 0.579693 4.2:+33381552 MS.gene052279:CDS
TGGGGCCTAACATCTTCGCT+GGG 0.579793 4.2:+33386006 MS.gene052279:CDS
TTCAGTCTATGGCTCTTCAG+AGG 0.580117 4.2:+33383860 MS.gene052279:CDS
AAGTGCTAGCGACAGTCTCA+AGG 0.580746 4.2:+33387920 MS.gene052279:CDS
TCGTCACATGAATGAGCGAC+TGG 0.581215 4.2:-33384757 None:intergenic
AGATTTGACCAAATGGCTAT+CGG 0.584731 4.2:-33384129 None:intergenic
AACCAAAGGAGAAGAATCAT+CGG 0.585357 4.2:-33383830 None:intergenic
AGCTCTCTCCATCAACTCAA+AGG 0.585970 4.2:-33383707 None:intergenic
CTACGATACAGCTAACAAGA+TGG 0.587118 4.2:+33382493 MS.gene052279:CDS
ATTTGACAACCCACCATGAG+AGG 0.587249 4.2:-33381562 None:intergenic
GGCAAGTCTATATTGTTGCA+AGG 0.588210 4.2:+33386795 MS.gene052279:CDS
AAAGCAAATGATTCTCTGCA+TGG 0.588675 4.2:-33385783 None:intergenic
GAAGCATACTCTATTCTCGA+TGG 0.588983 4.2:+33387942 MS.gene052279:CDS
TCTTCGTAGAATTTATGAAG+AGG 0.590789 4.2:+33388529 MS.gene052279:CDS
ATCAACTGAAGATTGTTCCA+TGG 0.591075 4.2:-33380650 None:intergenic
CATGCAATGTTTCTAAACAA+TGG 0.591520 4.2:-33384619 None:intergenic
ACATTGATAGCTAGTTCCAC+TGG 0.592898 4.2:+33382452 MS.gene052279:CDS
AAAGGTTTATTCAAACCCAA+TGG 0.595184 4.2:-33386444 None:intergenic
AAAGCAACCTTCATTCACAA+TGG 0.596003 4.2:-33388468 None:intergenic
TCCAACTAGAATACTCAAGT+AGG 0.596055 4.2:-33383416 None:intergenic
TCCAAATGGGAAGAAAGACT+GGG 0.596910 4.2:+33381272 MS.gene052279:CDS
AAAGTGTATGACAAGAACCT+TGG 0.597327 4.2:+33381639 MS.gene052279:CDS
ACTGCTTGATACACAATGAA+GGG 0.597649 4.2:-33384232 None:intergenic
GAGACCATGAATGAATCTGA+TGG 0.598208 4.2:-33388051 None:intergenic
ATATATCTGAAACTCTTAGG+TGG 0.598327 4.2:+33383212 MS.gene052279:CDS
GGGACCTTGCAGAAATACCT+TGG 0.599637 4.2:+33389755 MS.gene052279:CDS
TTGGACAGGGAGATTGGTGA+AGG 0.599861 4.2:+33381842 MS.gene052279:CDS
AGCAAAAGGATATATTTGGT+CGG 0.600821 4.2:+33389175 MS.gene052279:CDS
TCACCCGACAAATGCAGCAA+TGG 0.601627 4.2:-33381786 None:intergenic
TACAGCTAACAAGATGGAGA+TGG 0.602685 4.2:+33382499 MS.gene052279:CDS
ATTCCAGAAGGGCAAGTGAG+TGG 0.603620 4.2:+33383166 MS.gene052279:CDS
CACCCACACAACTTCTGCCA+AGG 0.603758 4.2:-33381656 None:intergenic
CTGAGACTTCTGAGCAGAGT+CGG 0.605842 4.2:-33380600 None:intergenic
TGTGATTGTTGGAATTCAAG+AGG 0.606056 4.2:+33385597 MS.gene052279:CDS
CCACACCATCTATAAAGCCA+TGG 0.606526 4.2:+33383138 MS.gene052279:CDS
AGTAACAGAAGCTTCAAGAT+GGG 0.607230 4.2:-33388405 None:intergenic
GCTTCTATCAGAACCTAACT+GGG 0.607707 4.2:+33384654 MS.gene052279:CDS
GGATATGGTCCCAAAAGAAG+TGG 0.608790 4.2:+33389240 MS.gene052279:CDS
ATCATGTTGAAGAGTTGCCA+AGG 0.610184 4.2:-33389772 None:intergenic
CCATGGCTTTATAGATGGTG+TGG 0.610200 4.2:-33383138 None:intergenic
ATTAGTACAAATTCACATGA+GGG 0.610597 4.2:+33386767 MS.gene052279:CDS
CCAACTAGAATACTCAAGTA+GGG 0.612639 4.2:-33383415 None:intergenic
ATCACGAATCAAGGCCCTGA+AGG 0.613284 4.2:+33383942 MS.gene052279:CDS
GACTGAAATATATAAACCAA+AGG 0.613987 4.2:-33383844 None:intergenic
GAAGAATCTACATACTCAGA+AGG 0.614032 4.2:-33385808 None:intergenic
CTTGAGATGTAGAACTGTCA+CGG 0.614239 4.2:+33387858 MS.gene052279:CDS
CCATGGAATATATTCCAGAA+GGG 0.614669 4.2:+33383155 MS.gene052279:CDS
AATTAGTACAAATTCACATG+AGG 0.615119 4.2:+33386766 MS.gene052279:CDS
GCCTCAACTCCGTCAAGCTG+GGG 0.616839 4.2:-33381309 None:intergenic
TCGATGGATGTGGGGCATGT+GGG 0.617530 4.2:+33387958 MS.gene052279:CDS
GGCACAAAACTTGAAGTCAA+CGG 0.618669 4.2:-33386576 None:intergenic
GACAAGTGCTGAGTTGTCGA+GGG 0.618829 4.2:-33384692 None:intergenic
ACTTGATGAGGTAGGATCCG+TGG 0.622558 4.2:-33386730 None:intergenic
GATTCAGCCACTATAACTGA+AGG 0.623017 4.2:+33383340 MS.gene052279:CDS
GAACCTTGGCAGAAGTTGTG+TGG 0.623856 4.2:+33381653 MS.gene052279:CDS
ACTCTTGACGTTAAGAGGGG+AGG 0.627639 4.2:-33384806 None:intergenic
TGAATTGAAAACTAGGCTGC+GGG 0.628301 4.2:+33386926 MS.gene052279:CDS
CATTCAAAGCATATATAGAG+AGG 0.629748 4.2:+33386952 MS.gene052279:CDS
CAGAAACAAAGACTGGGGAC+TGG 0.633640 4.2:-33384017 None:intergenic
TGTAGATTCTTCCAAGCTCG+AGG 0.633915 4.2:+33385819 MS.gene052279:CDS
ATAGATGAAGCTTTAAGACC+GGG 0.639683 4.2:+33389585 MS.gene052279:CDS
GTTGCCAAGGTATTTCTGCA+AGG 0.640260 4.2:-33389759 None:intergenic
AGGCTCATGATGACTTGTGA+TGG 0.644166 4.2:+33383019 MS.gene052279:CDS
AACCTTGGCAGAAGTTGTGT+GGG 0.644944 4.2:+33381654 MS.gene052279:CDS
TCCAACTAGAGCTCTCTCCA+CGG 0.648433 4.2:-33387009 None:intergenic
ATGAATTGAAAACTAGGCTG+CGG 0.653407 4.2:+33386925 MS.gene052279:CDS
GATTCCGCAAGAAAGTTCAA+GGG 0.654336 4.2:+33382095 MS.gene052279:CDS
GATGAGGTAGGATCCGTGGA+AGG 0.659015 4.2:-33386726 None:intergenic
TTGATGTGGAAACGTGAGCA+TGG 0.659588 4.2:+33386069 MS.gene052279:CDS
ATGTTTACCAATGAACAACA+AGG 0.664462 4.2:-33385686 None:intergenic
TCTATCAAAGCATAGACACC+CGG 0.670642 4.2:-33389603 None:intergenic
TATACGTTGCCATGTCAACG+TGG 0.671381 4.2:+33385915 MS.gene052279:CDS
ATAGGAGATTAAGCAACTGG+TGG 0.671752 4.2:-33384840 None:intergenic
TCACGGCTACTCCCGATCCA+GGG 0.677895 4.2:+33387875 MS.gene052279:CDS
GCGTCTCTTTGAATATGTCG+CGG 0.678941 4.2:+33381394 MS.gene052279:CDS
GAAGTGATCCTATTTGGACA+GGG 0.688556 4.2:+33381829 MS.gene052279:CDS
AGAAGGTCTGATGATATATG+CGG 0.688821 4.2:-33384309 None:intergenic
GAAAGTATATGTGAAAACAG+AGG 0.692069 4.2:+33382382 MS.gene052279:CDS
ATCATCAGAAACAAAGACTG+GGG 0.692993 4.2:-33384022 None:intergenic
GGACAAGCAGAGTATACCAG+TGG 0.696547 4.2:-33382468 None:intergenic
AAAACAGAGGACACATCTGG+AGG 0.697664 4.2:+33382395 MS.gene052279:CDS
GTGCGTTCGAGAGTGGACGA+TGG 0.697817 4.2:+33381162 MS.gene052279:CDS
AAAACTCTTGACGTTAAGAG+GGG 0.707798 4.2:-33384809 None:intergenic
ATACGTTGCCATGTCAACGT+GGG 0.708927 4.2:+33385916 MS.gene052279:CDS
AAGATACTAAGTTCTGACTG+TGG 0.709221 4.2:-33387783 None:intergenic
CCAAATGGGAAGAAAGACTG+GGG 0.710304 4.2:+33381273 MS.gene052279:CDS
AGAGCTGATGATACTGACAG+TGG 0.710372 4.2:+33383724 MS.gene052279:CDS
TGTGCTCTGAAAATATACCA+AGG 0.717076 4.2:-33385404 None:intergenic
TTTATGGGTTGAAACGACTG+GGG 0.719393 4.2:+33381596 MS.gene052279:CDS
CAACGAAACACAATCAAGAG+CGG 0.719618 4.2:-33381532 None:intergenic
ATTCAAACCCAATGGCACCG+GGG 0.722722 4.2:-33386436 None:intergenic
GAGTGGAAGATTGTCCAGGT+TGG 0.735665 4.2:-33380628 None:intergenic
TTAAAGCAACCAGTGCCAGG+AGG 0.741595 4.2:+33382167 MS.gene052279:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 33380506 33389830 33380506 ID=MS.gene052279
chr4.2 mRNA 33380506 33389830 33380506 ID=MS.gene052279.t1;Parent=MS.gene052279
chr4.2 exon 33380506 33380708 33380506 ID=MS.gene052279.t1.exon1;Parent=MS.gene052279.t1
chr4.2 CDS 33380506 33380708 33380506 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33381137 33382745 33381137 ID=MS.gene052279.t1.exon2;Parent=MS.gene052279.t1
chr4.2 CDS 33381137 33382745 33381137 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33382983 33384359 33382983 ID=MS.gene052279.t1.exon3;Parent=MS.gene052279.t1
chr4.2 CDS 33382983 33384359 33382983 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33384562 33384929 33384562 ID=MS.gene052279.t1.exon4;Parent=MS.gene052279.t1
chr4.2 CDS 33384562 33384929 33384562 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33385390 33387149 33385390 ID=MS.gene052279.t1.exon5;Parent=MS.gene052279.t1
chr4.2 CDS 33385390 33387149 33385390 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33387755 33388196 33387755 ID=MS.gene052279.t1.exon6;Parent=MS.gene052279.t1
chr4.2 CDS 33387755 33388196 33387755 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33388385 33388550 33388385 ID=MS.gene052279.t1.exon7;Parent=MS.gene052279.t1
chr4.2 CDS 33388385 33388550 33388385 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33389168 33389271 33389168 ID=MS.gene052279.t1.exon8;Parent=MS.gene052279.t1
chr4.2 CDS 33389168 33389271 33389168 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33389581 33389672 33389581 ID=MS.gene052279.t1.exon9;Parent=MS.gene052279.t1
chr4.2 CDS 33389581 33389672 33389581 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
chr4.2 exon 33389754 33389830 33389754 ID=MS.gene052279.t1.exon10;Parent=MS.gene052279.t1
chr4.2 CDS 33389754 33389830 33389754 ID=cds.MS.gene052279.t1;Parent=MS.gene052279.t1
Gene Sequence

>MS.gene052279

ATGGTCGATTTGGAAGCGAATCAAATGAAGCAAAATCGCAAGCGAAAGCAGAAAATCCATGAACAACCCCAAAAGCCTTCCAAATTGCATCGTTCCGACTCTGCTCAGAAGTCTCAGGATCACCAACCTGGACAATCTTCCACTCCATGGAACAATCTTCAGTTGATACTCTGCATCCAAGACAAAAACCTTGATCTTAACAGGTTATTTTCATTCATCTTTTAGTTAATCACTCTGTTTCCTAAAAAATACGGGATACTTGATAAGCTAGCTTTTAGCGGATAAGATAGTTGATTGAATTTGCAGTGTTTAACATAATTAGTTGTCGAATTAGCTTATAAATATGAAATGACATAAAAAATATATGTCTAGTTAATATTTTTTTATTTTTATTTTTAAATTAAGATAAAACACGTAAAATTGAGAGAAAAAAATGATAAGCTATAAGTTCGCAAAAACGGGACTTATTTAGTCATATGAACATATAAGCTAGGTTATTGTGCTTGCCATACACACCTTATATCTTGTAATATGAGACAAGTTTTCAAGTAATTGAATCCTTTCAACAGTGTGTGTTAATGTTTTTGGTGAAAAATTAACTTCTTCTTTCCTGCTTTTTGTGTTAATGCAGTAAGCTTAATCAAGCATTCAATTTTGTGCGTTCGAGAGTGGACGATGGTGCTCACATTGATCAGAATTGTGAAACTATACAATTACCAAGACTGCTAGGTTATCTTAATGATTGGATCTTGACAGTTTTGTTCCCTCCAAATGGGAAGAAAGACTGGGGCGAAGGAAAAACGCCCCAGCTTGACGGAGTTGAGGCATATATGGATCTTCGTTGTTGGGAGATTTTCAAGTTCTGCTTGGATGAGTCTTTGAAGTGTCGCGTCTCTTTGAATATGTCGCGGAATCTTCTACAGACTGTTCAATTTATTGTCAGAAATATTATGTTGCTGCTAGAGACCTTCTCTACCAGTTCAGAAGAACATTTTAAATCTGATGAAACGTTTAAATTATACGAGACCGCTCTTGATTGTGTTTCGTTGGTGTTCTCCTCTCATGGTGGGTTGTCAAATGAAAATTTGGATTTATGGGTTGAAACGACTGGGGCAGTGCTTGGGCTCGTCCAAAAAGTGTATGACAAGAACCTTGGCAGAAGTTGTGTGGGTGCTTGTGCATTACGCCTTTTGTGGTTGGTGCTTCAGCCCTTCTCCAAGTTTTTGAGGGTCCATCCAGCCAGGAAAGGATTTGAAAGTTTTGTGGTTAAACTTCTTGAGCCATTGCTGCATTTGTCGGGTGAGTTGCATTGTCGGGTTAATGGAAGTGATCCTATTTGGACAGGGAGATTGGTGAAGGTGGTGGAAGAAGTTCTTTCTCATGGACTTTTTCATCCAGTTCATATTGATGAATTTTTAAGCTTACATGGTTCAGAAAAGTATGTTGCTTCGTGTGATGATAAATCAAAAGATTCTAAAGCAACTATTAAGAGCTATCATAGACATTTGTTTGATGCGCTGAATGAAATTATATCCAGAAAGAAAGCTATAGCAATGGGTAGCTTAGGTTTGATATTTCGTTTGTATGCTGATTCCGCAAGAAAGTTCAAGGGAATTTTAGTTTCGTATGAAGGGAGCAATACAACAGAGAAAATAAATGATTTAAAGCAACCAGTGCCAGGAGGAACTAGTAGCTCCAATAATACTTCTGTCGATATTCAAAAATCCCTTTTTAATTTTTTGGTGCTGATTATGGAGCCTCTTTTGCTTGAAATGAATGCATGTATCCAAGCTAAAATAGATGCCAAGCTCCTTTTTTCTGATCTTTGTGGTATACTGAAGTCTATTGGTAATTTGCTTGCTAGTTTTATGCAAGAGAAAGTATATGTGAAAACAGAGGACACATCTGGAGGAGCTTGTCTTAATTTTTTGAAGAAAATATTTAATACATTGATAGCTAGTTCCACTGGTATACTCTGCTTGTCCAACTACGATACAGCTAACAAGATGGAGATGGAAATATTTATTTTATCAGCTAACGAGACGTTAGTTGCAATGGGCTATCTTTTGGAAATTGAGTATGAAGTTATTGGAGAAGATTTGGTGAATTTATGGCTTATTTTGTTATCATACTCTGCCATCAATTGTAATATGGCAAATGCTTTTGATCAGAGCTCATTATCTTCAACTATTCCTGCATTGGGGTGCCAAATAGTTAATCTCTACAGTCAACTTCGTCAGGTTTGTATCCAAACTCTGATTACTATAGCAACTTATGTTTTAAAGGTTTGCATAGGTTTGTCTTTCTTGTGGTTTCATTACTATACTGTGTGTTAGACTGTCAGTAACTCATAGTAATTCTAGGTATGATCATTTGGCAGAGGGAAGGGAAATGATGGTCAGGGAAAGTCTTACTGAAATTTACTATATTCATGGTTTTATTAAGCTAACACCACATTTTGTCTGTTAATGATGTAGGTACAAATTGCCATTTTAGCATTGTGCAAAGCGCTAAGGCTCATGATGACTTGTGATGGTGATGCTGAAGAAAGTTCTTCTAAGTTATTGACATTTCTGTCTAATGATATTTATTCCGAATCAGTTGAAAGGCTGTTATCTTCACACAAGTTCATCCACACCATCTATAAAGCCATGGAATATATTCCAGAAGGGCAAGTGAGTGGGTTTATTAGACAGATAACAGATGATATATCTGAAACTCTTAGGTGGATGAAAGACTGCTCTCCATTGGTTGATGGAAACAAATGGCGAAAGATTAATCTGCAGGCAGAACTCTTGGGTAGAGGGCTCTCCAGACTGTATTCTTTAGTGCTTGATTCAGCCACTATAACTGAAGGCAATAGCAATCTTGTCGGAGTTGCTGTTAAAGAACTTATTTCATTATTGCGTCCCTACTTGAGTATTCTAGTTGGACAACAACCAGATACTATATGCCCAGATACTATTTGCCTAGATACTATTTGCAAGTTTTTTTCGCCTATTATAGGAGAAACTGTTGATCGGGCTGTTGGAAAGGGCAAGGTTTTGAAGAAATTTGGTAGGTCCAGTCAATGGATCTTTGTTTTCTTTTTGCAGTTGTTTGTGTCCAGCCGAAGCTTGCTTAGGCAAGCAATCAGCCTTATGCCTCCTCGCTTGTCAAAAAAAATGTCTGCTGAGATGGGGGATTACTCAGCATATTCTGCCTTTGAGTTGATGGAGAGAGCTGATGATACTGACAGTGGTTTCTTCTCGTGGATTGCCCAACCTTCTGCTTCCCTCCTTTTTGTTATGAAATTAATTTCAAAATTCTATCTAAAGTATGGCTCCGATGATTCTTCTCCTTTGGTTTATATATTTCAGTCTATGGCTCTTCAGAGGCTTGTTGACTTGGATAGACACATTATATTGTTGACGTATTTGCAAAAGAAGCATTACAAATCACGAATCAAGGCCCTGAAGGAAGAGGCTGCTGGACTTGCTAGTTTTATTATGGAAAACTTAGCATGCGTGTACCAGTCCCCAGTCTTTGTTTCTGATGATGTAAGGTGCAAAGGTTTAGTTTCTTTGGCTCCTCAAATCAACAAATGGAATCAAGGAATTTATGTTGCTAACAAAAATTCGTTGCCGATAGCCATTTGGTCAAATCTCTGCAAAAATATTGATATTTGGGGAAACCATGGTTCCAAGAAGCAGTTGAAAGAATTCTTCTCACATTTACTTCGTATTTCCCTTCATTGTGTATCAAGCAGTTTTCAAGAGCCAGACATTCTAGTTGACTGTATGCTGCTCAAGAGAGTCACTTTACCGCATATATCATCAGACCTTCTAAGTGATTCAATTTTGTATGAACAAAAGGTGAGATGCGTTGGTTATGCATTTTTTTTTTATCACACACTCATGAATAATCTAGTAAAGAATTGCATATTAATCTTTTCCAGTGTTTATTTACTGTCAGTTCTGTAAACTTCAATTTGTTTGTTGTTTGATGCTTTTATGCAATATTTTGAGTAAGAAAACGACTTTATCTATATGTATTCATTAGATTGTGTTGTTTTAGTTTGCCCACAGGAATCTTGCCAAAATCTTTTGCAGTGCTTTAGAGGAAACTGTGTTACCATTGTTTAGAAACATTGCATGTACTGCTGTCGAGCTTCTATCAGAACCTAACTGGGTTGAGTTCTTAAGTGCCCTCGACAACTCAGCACTTGTCGAAAATAAAGAGGTTCCAGTTAACTGTTTTGTAATTCAAAAACCAGTCGCTCATTCATGTGACGATACAGATGTCAGCAGCAGAGAAAATTCCTCCCCTCTTAACGTCAAGAGTTTTACAGATTGCCACCAGTTGCTTAATCTCCTATCTTTGATGTCGGATGTAAATGCAAGCTCTTTTTCAGATATTGTGTCTTGTATTTTCAACCTTGAAAGGTACAATCATCTCTGTGTTGGATACTACCTTATTGTCTTTTATGTGTGTAAATAAAAGAACAAATTATATTACTAAGGAGAAATTTTGTAATTAGTGCCTAGGATAAAATTGCTCCAAAAACACAGAAATTGATTAAAAGAGAGCGTGAATTAAAGGGATAAAAAATGCCACAACAGTTTCTGAATTTTGCTGATATTGTGAAAGAGAACTTGCATGCCAGAAACACAATCCAATGCCATAATTTGATCAGTTGCTTATATGCACTTCAAATTAATTTGATGAAAATGCAAAAGCATCTTTATTTGCAAAGAGATTTTCAATTTTGTTTATTATACACTCCTTGCTGATGAGAAGAAAAACCAAATAGTTGTGAACCTTTGATAAAGATGTCTTAGACACATTTAGCTATTTGTGAAAGACATGATTAATCCTCAATTTCTGTCTGCATAATTTTTGCAGGCTTCTTGTAAATGCCTTGGTATATTTTCAGAGCACAATGTACCGGGACTATTATTGTGAATATTTGAGGTTGTTTGTCTCTTGCCGGAAGGCCTTAAGGTATATATTAATGGGATTCTGTGAGAAGACAGACACCATTCAATCCTCGCCAGACTTGGTTATTTTTGGAAGTTCATTTCCTGTTTTGTGGCTTTCAAAGTCATTATCTGTGATTGTTGGAATTCAAGAGGTATTCTCAGCAGAAAATATTCCATTTAAATCACTAATATTTTCTTTAATGGATCACACGTCATATGCCTTGTTGTTCATTGGTAAACATCAAATTATCCATGCTTTTTCTTTTGATAAAGAAGCTGAGATGTCTTGTGAAGAGATCTCTGATCACAAAGTAAGCCATGCAGAGAATCATTTGCTTTCACCTTCTGAGTATGTAGATTCTTCCAAGCTCGAGGAATTGAAGTGTTTAACCTTAATGGCTGACAATTTGAAAGAGCATATGCAAAACTTGCCTGTTTCTCAAAAGGGTATACGTTGCCATGTCAACGTGGGACACGGTCTTTCGTACGAAAACATTAATAGATTGTCTTCTGCAGTTTCGTGCTTTAGTGGAGTCTTGTGGGGCCTAACATCTTCGCTGGGTCAAACAGATGCTAAAGATAGTGGTCATAAAGAAAGAGTGTTGATGTGGAAACGTGAGCATGGCTCTGAACTAAATAGCTGTATATTTTCTTTTGTGGAAGTTGTTGATTTCTTTATAAACAAATTGCTCAATGAGAATAATCAACTCTCCGAAAGTTTACATGATACCCAGAATTTTGAGAAGCCAATCTTAAACTTATCTCTGTTTGGTACAAATAGTTTGTCACCTGAATGCTCAGTTTCTAAGGCTAATAGCTCAGCTGGAACACAAAAAGAATCTATAAGGGAAGCTACTTGCTCCACTTCATCAGCAATTGATATTGTGTCCAAAATTGGCAGTGATGTTGAAAGTTTGTCAAATCCAGAAAATGTAAACTTCGTTGCCAGTCTTTTGGCTACGGATGATTCCCCGGTGCCATTGGGTTTGAATAAACCTTTGTTACAAAGCTTGGTAAAAGGTGATAATCCTGAAGTAGCTATTTTACTAAGACAACTGTTAATAGCTTCTGCGTCTCTTTTGAGGCTAAATTTGCTGTCGGATGATTCGCCGTTGACTTCAAGTTTTGTGCCTGCTTTTATTGAAATCTCACAAGTCTTGTTATTAGAATTTACAGAGATGGTTGAAGTCCCACAACAATCTGCGTTTCTTTTGTTAGATGGTGCTCTCAGCTATTTGACAGAATTAGCAAGTTATTTTCCTTCCACGGATCCTACCTCATCAAGTAAAGTTTATACAAAATTAGTACAAATTCACATGAGGGCAATAGGCAAGTCTATATTGTTGCAAGGAAAAAAGGCAACACTAACCTTACATGAAAGACAGTCAAGTACAAAGACACTGCATAAAGGATCATTTGAAACTTGCTCTTCTAATCAAATATACGACTCTTGCTTGAATGAATTGAAAACTAGGCTGCGGGTGTCATTCAAAGCATATATAGAGAGGCAATCAGAGTTGCATCTTTTGTCTACTATAGAGGCCGTGGAGAGAGCTCTAGTTGGAGTACAAGAAGGATTTGCTGTAATCTATGACATAAAAACAAGTAAAGATGGGGGTGAAATTTCGACACTTGTTGCAGCTGGCATTGATTGCTTGGACATGATTATTGAATTTGTTTCAGGTACATACTATGGCTATTTTGAAAATAAAATTTTCATTCCATTGTTTAATTAATGTTTGCGAACTACTTCCCTTTAATATCCTTTTAGTCATTATTAATGTTTGGAAACTACATCTCATTAATATTCTTTTAGTCATTGTTAAAGTTGGTAAAGTAGTACTATGTTTTGATTCACATCATAATATCTTATCATAAATCAAACCTGTGATTAATCTTCCAGTACGTGTTATACAAACACACACAGGAATATTATTTATTATGGTTTCTGTTCTCTAAAATAAAGCAGTCATCCGGATTCGGGTCATTCACTTATTCATTGTTTTGTTAATTTACCCTAAATGCTCACTCATATGTTATCTATAATCACTTTCTGGGAATCCTAACATTGTCTGTAGTTTTCACATTATGAATTACGATAACCACATTCCCTATTCATAATCCGCAGTTGAAACACTTGGATTATCTGATTGACATTGATTACATTTTATTGAATACTGCTGTTCTATGTTTTATCAATATATTGCATGCTTGATCAGTACAAAATAGGGAGAGGGAAAATGCATATCTATTTTTGTTATTTTATGACATTTTCCCCCCTTTTTAAGGTCGGAAAAGCTTGAAGCTCATCAAAAGCCACAGTCAGAACTTAGTATCTTCTATTTTCAGCATTATTGTGCATTTACAGAGCCCACATATATTTAATGGTAGCTTGAGATGTAGAACTGTCACGGCTACTCCCGATCCAGGGTCAGCCATTCTCATGTGTGTTGAAGTGCTAGCGACAGTCTCAAGGAAGCATACTCTATTCTCGATGGATGTGGGGCATGTGGGACACATGTTACATATCCCTGCAGCACTCTTTCAAAACTTCGATCAGCATAGAATTTCTAAAGCTTCTGGTCCATCAGATTCATTCATGGTCTCAGAAGAGCAAAATTATCATCCAGCAGAGCGAGTGAATATCAGTCATGTAGATCACCAATTCACAGTTAACCTATTTGTTGCATGTTGTCAACTATTGTGTACCATTATAAGGCATCGCCCAAGGTATGTTTAATTTTTGGACCTTTTGGCTCACTGTGCCTAAGTACAACTTCACGTATTGAATGGGTAGAGATAGCAAATATGTGATGATATTGTTATTTGATGTACTTAATAGCATCTTTGTGTAAGCTGGCTTATTATTGTAATCCCAACATTTAGATGATACTCTGCTTGTTTTATAATCTTTCCAGTGAGTGCAAGCAGTGCGTTGCCCATCTTGAAGCTTCTGTTACTGTTCTTCTTAATTGCTTGGAGACTGTTTTAGAGAATAAATCCATTGTGAATGAAGGTTGCTTTTCTTGGGAAATAGACGAGGGAGTGAAATGTGCTTGTTTTCTTCGTAGAATTTATGAAGAGGTATGCACATCCATGTATATGCCTTTTGAGCAGTGAACACAAATGCATTATTAACATTTTGTGCAATGCATGTTAGTAATTTTCCTCCTCCCAAATACTCTCCCTGTCTTGCCTTTTCAAAGCCAAATTTTATTTTATGCATGAATTGCTTGTACACTCTTGCTTTCTGTTAATGTTAATTTTGACAAAGGACAGAGGTAAGTGGGTCAAATTTCAAACAGTCTATGTTATGCTTTCTATACATCAATATATCTTCACCTATTTTTGTACTGATGAACTCAGACCAACATAGAAGAGAAAACGACAAAAACAGACAGAATATTATTCTATTGTAGTTCCTAAGCCTGTTTCAGCTTGCTTGCATGAAACACCGTCTATATGTTGCTGGTAGTAGGCAGTTGTAGTTCCTAAGCCTGTTGTATTCTTAACGTAGATATGGCATATTACTTTACCAGTTAGTGTTTGTTTACCTTCTTGATTTAGCAAATCAAGAAAAAAAAGCACCAAAAAAGATCAGCCTTTATTTAACAAATCATTTATTTGTTTCTTATTTTTGATGGCTTATTCTTTTTATGTTCCTTTTGCTTACCTAGTTTGTTTCTATGGTCATGATGCAGATAAAACAGCAAAAGGATATATTTGGTCGGCAATGTTGTCTGTTTTTATCGAACTACATATCGGTATATTCAGGATATGGTCCCAAAAGAAGTGGTATTAGAAGGTTGTATATTACTTTCCTTGTCTACTCATTTCTTTTTTCTGGTTGCATGTTTACACTTTTCAATTGCACAGATACCCTTTTTCTATTCCTGACTATCATTAAACTTTATCATCTGAGTTTCTCAAAATACTGATATTGATCCATGCATGTATTAAATTTTTTCTTTTGTCCATATTTCGAAATGAATAACAATGAAAAATTATAAATACATATGAAAATTGGTAGGCTGAGTGTGGCTGACTTCTTTAGGAAAGTTTAGCTAAATAAACATTAGCAAATACTAATAATTATTTGCATTATTATTTGCAGAGAAATAGATGAAGCTTTAAGACCGGGTGTCTATGCTTTGATAGATGCTTGCTCAGTTGATGATCTTCAATATCTTCATACTGTTTTTGGAGGTAAGCAATCTTGACAAGAACAAATTCTAGCGAAGTAATTAAAGGAAGAATCTAATTTCGATTTTTTCCTTCATTTTGTAGAGGGACCTTGCAGAAATACCTTGGCAACTCTTCAACATGATTACAAACTCAATTTCAAATATGAAGGAAAAGTGTGA

Protein sequence

>MS.gene052279.t1

MVDLEANQMKQNRKRKQKIHEQPQKPSKLHRSDSAQKSQDHQPGQSSTPWNNLQLILCIQDKNLDLNSKLNQAFNFVRSRVDDGAHIDQNCETIQLPRLLGYLNDWILTVLFPPNGKKDWGEGKTPQLDGVEAYMDLRCWEIFKFCLDESLKCRVSLNMSRNLLQTVQFIVRNIMLLLETFSTSSEEHFKSDETFKLYETALDCVSLVFSSHGGLSNENLDLWVETTGAVLGLVQKVYDKNLGRSCVGACALRLLWLVLQPFSKFLRVHPARKGFESFVVKLLEPLLHLSGELHCRVNGSDPIWTGRLVKVVEEVLSHGLFHPVHIDEFLSLHGSEKYVASCDDKSKDSKATIKSYHRHLFDALNEIISRKKAIAMGSLGLIFRLYADSARKFKGILVSYEGSNTTEKINDLKQPVPGGTSSSNNTSVDIQKSLFNFLVLIMEPLLLEMNACIQAKIDAKLLFSDLCGILKSIGNLLASFMQEKVYVKTEDTSGGACLNFLKKIFNTLIASSTGILCLSNYDTANKMEMEIFILSANETLVAMGYLLEIEYEVIGEDLVNLWLILLSYSAINCNMANAFDQSSLSSTIPALGCQIVNLYSQLRQVQIAILALCKALRLMMTCDGDAEESSSKLLTFLSNDIYSESVERLLSSHKFIHTIYKAMEYIPEGQVSGFIRQITDDISETLRWMKDCSPLVDGNKWRKINLQAELLGRGLSRLYSLVLDSATITEGNSNLVGVAVKELISLLRPYLSILVGQQPDTICPDTICLDTICKFFSPIIGETVDRAVGKGKVLKKFGRSSQWIFVFFLQLFVSSRSLLRQAISLMPPRLSKKMSAEMGDYSAYSAFELMERADDTDSGFFSWIAQPSASLLFVMKLISKFYLKYGSDDSSPLVYIFQSMALQRLVDLDRHIILLTYLQKKHYKSRIKALKEEAAGLASFIMENLACVYQSPVFVSDDVRCKGLVSLAPQINKWNQGIYVANKNSLPIAIWSNLCKNIDIWGNHGSKKQLKEFFSHLLRISLHCVSSSFQEPDILVDCMLLKRVTLPHISSDLLSDSILYEQKFAHRNLAKIFCSALEETVLPLFRNIACTAVELLSEPNWVEFLSALDNSALVENKEVPVNCFVIQKPVAHSCDDTDVSSRENSSPLNVKSFTDCHQLLNLLSLMSDVNASSFSDIVSCIFNLERLLVNALVYFQSTMYRDYYCEYLRLFVSCRKALRYILMGFCEKTDTIQSSPDLVIFGSSFPVLWLSKSLSVIVGIQEVFSAENIPFKSLIFSLMDHTSYALLFIGKHQIIHAFSFDKEAEMSCEEISDHKVSHAENHLLSPSEYVDSSKLEELKCLTLMADNLKEHMQNLPVSQKGIRCHVNVGHGLSYENINRLSSAVSCFSGVLWGLTSSLGQTDAKDSGHKERVLMWKREHGSELNSCIFSFVEVVDFFINKLLNENNQLSESLHDTQNFEKPILNLSLFGTNSLSPECSVSKANSSAGTQKESIREATCSTSSAIDIVSKIGSDVESLSNPENVNFVASLLATDDSPVPLGLNKPLLQSLVKGDNPEVAILLRQLLIASASLLRLNLLSDDSPLTSSFVPAFIEISQVLLLEFTEMVEVPQQSAFLLLDGALSYLTELASYFPSTDPTSSSKVYTKLVQIHMRAIGKSILLQGKKATLTLHERQSSTKTLHKGSFETCSSNQIYDSCLNELKTRLRVSFKAYIERQSELHLLSTIEAVERALVGVQEGFAVIYDIKTSKDGGEISTLVAAGIDCLDMIIEFVSGRKSLKLIKSHSQNLVSSIFSIIVHLQSPHIFNGSLRCRTVTATPDPGSAILMCVEVLATVSRKHTLFSMDVGHVGHMLHIPAALFQNFDQHRISKASGPSDSFMVSEEQNYHPAERVNISHVDHQFTVNLFVACCQLLCTIIRHRPSECKQCVAHLEASVTVLLNCLETVLENKSIVNEGCFSWEIDEGVKCACFLRRIYEEIKQQKDIFGRQCCLFLSNYISVYSGYGPKRSGIRREIDEALRPGVYALIDACSVDDLQYLHTVFGEGPCRNTLATLQHDYKLNFKYEGKV