Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052336.t1 | XP_003607353.1 | 95.3 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 7.20E-158 | 566.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052336.t1 | B7FKU1 | 95.3 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 5.2e-158 | 566.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050320 | MS.gene052336 | 0.809347 | 1.98E-50 | -1.69E-46 |
| MS.gene052336 | MS.gene28980 | 0.873079 | 1.94E-67 | -1.69E-46 |
| MS.gene052336 | MS.gene51428 | 0.808397 | 3.16E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052336.t1 | MTR_4g076880 | 97.799 | 318 | 7 | 0 | 1 | 318 | 1 | 318 | 0.0 | 629 |
| MS.gene052336.t1 | MTR_1g055160 | 93.730 | 319 | 18 | 2 | 1 | 318 | 1 | 318 | 0.0 | 602 |
| MS.gene052336.t1 | MTR_1g055160 | 93.103 | 319 | 18 | 3 | 1 | 318 | 1 | 316 | 0.0 | 593 |
| MS.gene052336.t1 | MTR_1g055145 | 83.529 | 85 | 14 | 0 | 133 | 217 | 196 | 280 | 4.48e-44 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052336.t1 | AT3G13410 | 51.420 | 317 | 143 | 7 | 5 | 318 | 12 | 320 | 5.35e-102 | 302 |
| MS.gene052336.t1 | AT1G55546 | 56.383 | 94 | 37 | 3 | 20 | 113 | 40 | 129 | 1.35e-23 | 94.4 |
Find 75 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAAGACTCATTGGTTTC+AGG | 0.174899 | 4.4:-33702622 | MS.gene052336:CDS |
| GTGGCTCTCTTCCTTCTTCT+TGG | 0.191358 | 4.4:+33702378 | None:intergenic |
| ACGGACTTTGCTAGGTCTTT+TGG | 0.237765 | 4.4:+33703238 | None:intergenic |
| CAATCCAGTATCCTTCTTAT+AGG | 0.262025 | 4.4:-33702111 | MS.gene052336:CDS |
| CCAGCTTAAATCATCACTTT+TGG | 0.275529 | 4.4:-33702014 | MS.gene052336:CDS |
| TTCCTTCTTCTTGGTCAAAT+AGG | 0.287794 | 4.4:+33702387 | None:intergenic |
| GTGGCGCCTCAAATCTTGTT+GGG | 0.319930 | 4.4:+33700686 | None:intergenic |
| GTGCAAAGGGAAGAAATTTC+AGG | 0.329628 | 4.4:-33703072 | MS.gene052336:CDS |
| ATCAGCTCTGTAGAGGAATC+TGG | 0.330362 | 4.4:-33702175 | MS.gene052336:CDS |
| GAAGCCTGCGGAGATGATTT+AGG | 0.333542 | 4.4:-33702592 | MS.gene052336:CDS |
| GAAGGAGTCTGTTAATTATC+AGG | 0.343914 | 4.4:-33703269 | MS.gene052336:CDS |
| TGCGGAGATGATTTAGGAAT+TGG | 0.347460 | 4.4:-33702586 | MS.gene052336:CDS |
| TTCCTTGGATCTTGCTCCAT+GGG | 0.372439 | 4.4:-33702553 | MS.gene052336:CDS |
| CCACAAAGGGAAAACAGATT+TGG | 0.378624 | 4.4:-33702359 | MS.gene052336:CDS |
| AATCCAGTATCCTTCTTATA+GGG | 0.385077 | 4.4:-33702110 | MS.gene052336:CDS |
| GGAATTGATAAAACTCCGTT+TGG | 0.385500 | 4.4:+33704337 | None:intergenic |
| CTACAGTTCCCGCTTTCCTT+TGG | 0.392903 | 4.4:-33704309 | MS.gene052336:CDS |
| GATCCCTATAAGAAGGATAC+TGG | 0.395705 | 4.4:+33702107 | None:intergenic |
| TGTGAACTTGGAAGACTCAT+TGG | 0.398899 | 4.4:-33702629 | MS.gene052336:CDS |
| TCCATCACAAGCTGTAGAAT+TGG | 0.403651 | 4.4:+33702042 | None:intergenic |
| ATTGGCAACGTTGCTTTCCT+TGG | 0.404386 | 4.4:-33702568 | MS.gene052336:CDS |
| TTTCTAGCAGAAAGTACATC+AGG | 0.409982 | 4.4:-33702076 | MS.gene052336:CDS |
| CTTTGCAGGGTCTCAGAGAA+TGG | 0.410550 | 4.4:-33703295 | MS.gene052336:intron |
| TTTCCTTGGATCTTGCTCCA+TGG | 0.412775 | 4.4:-33702554 | MS.gene052336:CDS |
| TGTGGCGCCTCAAATCTTGT+TGG | 0.413846 | 4.4:+33700685 | None:intergenic |
| CAGATAAAACGGACTTTGCT+AGG | 0.448555 | 4.4:+33703230 | None:intergenic |
| AGCATCAGAGGATGTGAACT+TGG | 0.456717 | 4.4:-33702641 | MS.gene052336:CDS |
| GATCTGGCACTTCTATTTGT+CGG | 0.459356 | 4.4:-33703041 | MS.gene052336:CDS |
| TCCTCTGATGCTGAAACATA+AGG | 0.468218 | 4.4:+33702652 | None:intergenic |
| ATCGGGCCTTTGCTGTATGA+TGG | 0.483662 | 4.4:-33700719 | MS.gene052336:CDS |
| AGAAGGAAGAGAGCCACAAA+GGG | 0.490715 | 4.4:-33702372 | MS.gene052336:CDS |
| TGACTCCCCAACAAGATTTG+AGG | 0.493336 | 4.4:-33700692 | MS.gene052336:CDS |
| TTGTATTTGGATAGTGCAAA+GGG | 0.493394 | 4.4:-33703085 | MS.gene052336:intron |
| TCAGCTCTGTAGAGGAATCT+GGG | 0.496576 | 4.4:-33702174 | MS.gene052336:CDS |
| TTCGCGATTTCCATCACCCA+TGG | 0.496660 | 4.4:+33702537 | None:intergenic |
| ATTTCAGGATCCTCTCGATC+TGG | 0.506004 | 4.4:-33703057 | MS.gene052336:CDS |
| CCAGCCTGCTTCAGATAAAA+CGG | 0.506908 | 4.4:+33703219 | None:intergenic |
| AGGAAATGCCATGGAAGTGT+TGG | 0.514527 | 4.4:+33702672 | None:intergenic |
| TTTGTATTTGGATAGTGCAA+AGG | 0.521221 | 4.4:-33703086 | MS.gene052336:intron |
| TCCTTATGTTTCAGCATCAG+AGG | 0.521469 | 4.4:-33702653 | MS.gene052336:CDS |
| GGATCTTGCTCCATGGGTGA+TGG | 0.521829 | 4.4:-33702547 | MS.gene052336:CDS |
| AAGAAGGAAGAGAGCCACAA+AGG | 0.528123 | 4.4:-33702373 | MS.gene052336:CDS |
| CTTTGCAGATCCCTATAAGA+AGG | 0.530818 | 4.4:+33702100 | None:intergenic |
| GGTCTCAGAGAATGGATTGA+AGG | 0.532894 | 4.4:-33703287 | MS.gene052336:CDS |
| TGTGAGATCCAACACTTCCA+TGG | 0.532959 | 4.4:-33702680 | MS.gene052336:CDS |
| TCGGGCCTTTGCTGTATGAT+GGG | 0.544701 | 4.4:-33700718 | MS.gene052336:CDS |
| GGCCTATTTGACCAAGAAGA+AGG | 0.544862 | 4.4:-33702389 | MS.gene052336:CDS |
| CTCTACAGAGCTGATAAGCT+CGG | 0.545689 | 4.4:+33702183 | None:intergenic |
| CCAAAAGTGATGATTTAAGC+TGG | 0.555189 | 4.4:+33702014 | None:intergenic |
| TGAGAAGACCAAAGGAAAGC+GGG | 0.556838 | 4.4:+33704301 | None:intergenic |
| TGGCGCCTCAAATCTTGTTG+GGG | 0.563003 | 4.4:+33700687 | None:intergenic |
| ACCAATTCTACAGCTTGTGA+TGG | 0.566623 | 4.4:-33702043 | MS.gene052336:CDS |
| GCAGAAAGTACATCAGGGAA+TGG | 0.568177 | 4.4:-33702070 | MS.gene052336:CDS |
| AATTCCTAAATCATCTCCGC+AGG | 0.570593 | 4.4:+33702588 | None:intergenic |
| ACTTCTATTTGTCGGTGGAG+AGG | 0.582571 | 4.4:-33703033 | MS.gene052336:intron |
| GATTTGGTTGTGTTCTGCAA+TGG | 0.583901 | 4.4:-33702343 | MS.gene052336:CDS |
| CACCCATGGAGCAAGATCCA+AGG | 0.584529 | 4.4:+33702551 | None:intergenic |
| AGCTCTTTCATACTTGCTCA+AGG | 0.589456 | 4.4:-33702830 | MS.gene052336:intron |
| CGAGCTTATCAGCTCTGTAG+AGG | 0.590194 | 4.4:-33702182 | MS.gene052336:CDS |
| CTTCTTATAGGGATCTGCAA+AGG | 0.590622 | 4.4:-33702099 | MS.gene052336:CDS |
| CTGGCACTTCTATTTGTCGG+TGG | 0.593795 | 4.4:-33703038 | MS.gene052336:CDS |
| CAAATGGATCATCACTCTTG+TGG | 0.596002 | 4.4:+33700667 | None:intergenic |
| TCAGGATTCGCTGAAGCCTG+CGG | 0.621670 | 4.4:-33702604 | MS.gene052336:CDS |
| GAAAGCGGGAACTGTAGTAG+AGG | 0.622626 | 4.4:+33704315 | None:intergenic |
| AATAGAAGTGCCAGATCGAG+AGG | 0.624175 | 4.4:+33703047 | None:intergenic |
| GTTGACAGAACACAATCTGA+AGG | 0.628507 | 4.4:-33702301 | MS.gene052336:intron |
| ATGAGAAGACCAAAGGAAAG+CGG | 0.630427 | 4.4:+33704300 | None:intergenic |
| GATTATAATGAGAAGACCAA+AGG | 0.630483 | 4.4:+33704293 | None:intergenic |
| AAAGCGGGAACTGTAGTAGA+GGG | 0.638997 | 4.4:+33704316 | None:intergenic |
| CAATTCCCATCATACAGCAA+AGG | 0.640893 | 4.4:+33700713 | None:intergenic |
| TTCTAGCAGAAAGTACATCA+GGG | 0.642277 | 4.4:-33702075 | MS.gene052336:CDS |
| GCAACGATCAAAGCAAGTAA+CGG | 0.644375 | 4.4:+33704373 | None:intergenic |
| CAGCTCTGTAGAGGAATCTG+GGG | 0.672726 | 4.4:-33702173 | MS.gene052336:CDS |
| TTTATGTGTCAGATATCTCG+AGG | 0.673512 | 4.4:-33702135 | MS.gene052336:CDS |
| TGAAACATAAGGAAATGCCA+TGG | 0.674109 | 4.4:+33702663 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAATAATACAGAAAT+AGG | - | chr4.4:33703798-33703817 | MS.gene052336:intron | 15.0% |
| !! | ATTAAAAAATCAGAATCAAA+AGG | - | chr4.4:33701256-33701275 | MS.gene052336:intron | 15.0% |
| !! | TTAAAAAATCAGAATCAAAA+GGG | - | chr4.4:33701257-33701276 | MS.gene052336:intron | 15.0% |
| !!! | ATTATGTTTTATTCATAAGA+AGG | + | chr4.4:33703184-33703203 | None:intergenic | 15.0% |
| !!! | TTAGAGTTAATTTTTTTTTG+AGG | - | chr4.4:33701587-33701606 | MS.gene052336:intron | 15.0% |
| !!! | TTTGTTGATAATTTTGATAT+CGG | - | chr4.4:33704323-33704342 | MS.gene052336:CDS | 15.0% |
| !! | ATGACCAATTATGAAATATT+AGG | - | chr4.4:33702595-33702614 | MS.gene052336:CDS | 20.0% |
| !! | CAGATTATTATAAAAGAAGA+TGG | + | chr4.4:33700809-33700828 | None:intergenic | 20.0% |
| !! | CTTAAGTGATTATACAAATT+GGG | - | chr4.4:33701455-33701474 | MS.gene052336:intron | 20.0% |
| !! | GATAATGATATAATCTACAA+TGG | - | chr4.4:33704172-33704191 | MS.gene052336:intron | 20.0% |
| !! | GATACCAGATAATTTAATTA+CGG | + | chr4.4:33703272-33703291 | None:intergenic | 20.0% |
| !! | GTAGATTATATCATTATCTT+AGG | + | chr4.4:33704170-33704189 | None:intergenic | 20.0% |
| !! | TAAATGATGCTCATATTATT+TGG | + | chr4.4:33703716-33703735 | None:intergenic | 20.0% |
| !! | TACAGAAATAGGAAAAAAAA+AGG | - | chr4.4:33703809-33703828 | MS.gene052336:intron | 20.0% |
| !! | TCATTGATATAAATTCTTAG+TGG | + | chr4.4:33704090-33704109 | None:intergenic | 20.0% |
| !! | TCCAAATACAAAATTGAAAA+AGG | + | chr4.4:33701966-33701985 | None:intergenic | 20.0% |
| !! | TCTTGTATCATTAAAATTTG+AGG | + | chr4.4:33703356-33703375 | None:intergenic | 20.0% |
| !! | TGTATAAAATTATATCTTGC+TGG | - | chr4.4:33701740-33701759 | MS.gene052336:intron | 20.0% |
| !! | TTAAGTGATTATACAAATTG+GGG | - | chr4.4:33701456-33701475 | MS.gene052336:intron | 20.0% |
| !!! | AAGTTGCGTTTTTATTTTAT+TGG | + | chr4.4:33701217-33701236 | None:intergenic | 20.0% |
| !!! | ACACATATTTTTTATGTAAG+TGG | - | chr4.4:33701555-33701574 | MS.gene052336:intron | 20.0% |
| !!! | ACATATTTTTTATGTAAGTG+GGG | - | chr4.4:33701557-33701576 | MS.gene052336:intron | 20.0% |
| !!! | AGTTGCGTTTTTATTTTATT+GGG | + | chr4.4:33701216-33701235 | None:intergenic | 20.0% |
| !!! | CACATATTTTTTATGTAAGT+GGG | - | chr4.4:33701556-33701575 | MS.gene052336:intron | 20.0% |
| !!! | TCCTTTTTCAATTTTGTATT+TGG | - | chr4.4:33701962-33701981 | MS.gene052336:intron | 20.0% |
| !!! | TTGTTGATAATTTTGATATC+GGG | - | chr4.4:33704324-33704343 | MS.gene052336:CDS | 20.0% |
| ! | AATGAATTGTAATTCAGATC+TGG | - | chr4.4:33704105-33704124 | MS.gene052336:intron | 25.0% |
| ! | AGATAATTTAATTACGGAGA+AGG | + | chr4.4:33703266-33703285 | None:intergenic | 25.0% |
| ! | AGGACCTAATATTTCATAAT+TGG | + | chr4.4:33702602-33702621 | None:intergenic | 25.0% |
| ! | CAAGAACTAAATGATACAAA+AGG | + | chr4.4:33701050-33701069 | None:intergenic | 25.0% |
| ! | GAAGTAACATCAGATATTAA+TGG | + | chr4.4:33704208-33704227 | None:intergenic | 25.0% |
| ! | GCTTAAGTGATTATACAAAT+TGG | - | chr4.4:33701454-33701473 | MS.gene052336:intron | 25.0% |
| ! | TAACATCAGATATTAATGGA+AGG | + | chr4.4:33704204-33704223 | None:intergenic | 25.0% |
| ! | TAAGTGATTATACAAATTGG+GGG | - | chr4.4:33701457-33701476 | MS.gene052336:intron | 25.0% |
| ! | TATGTGTACCATATAAGAAT+GGG | - | chr4.4:33701130-33701149 | MS.gene052336:intron | 25.0% |
| ! | TGTGATTCTTTCAATGAAAT+AGG | - | chr4.4:33701417-33701436 | MS.gene052336:intron | 25.0% |
| ! | TTCTCCGTAATTAAATTATC+TGG | - | chr4.4:33703265-33703284 | MS.gene052336:CDS | 25.0% |
| !! | AACTGTGCAATTAGTTATTT+TGG | - | chr4.4:33703414-33703433 | MS.gene052336:intron | 25.0% |
| !! | ATCTGTAGTAATTTGATAGT+TGG | - | chr4.4:33700824-33700843 | MS.gene052336:intron | 25.0% |
| !! | CATGCATGTTGTATATTTTT+AGG | - | chr4.4:33702843-33702862 | MS.gene052336:CDS | 25.0% |
| !!! | CAGTAAATTGTAACTTGTTA+TGG | + | chr4.4:33703844-33703863 | None:intergenic | 25.0% |
| !!! | CATATTTTTTATGTAAGTGG+GGG | - | chr4.4:33701558-33701577 | MS.gene052336:intron | 25.0% |
| !!! | GTTGCGTTTTTATTTTATTG+GGG | + | chr4.4:33701215-33701234 | None:intergenic | 25.0% |
| !!! | TCAACATTTTTTGAATCTTG+AGG | + | chr4.4:33702744-33702763 | None:intergenic | 25.0% |
| !!! | TTGCGTTTTTATTTTATTGG+GGG | + | chr4.4:33701214-33701233 | None:intergenic | 25.0% |
| AACAAAATTAAGCGAAAGAG+AGG | - | chr4.4:33701303-33701322 | MS.gene052336:intron | 30.0% | |
| AACATTATGATATCCTGATG+AGG | - | chr4.4:33704272-33704291 | MS.gene052336:intron | 30.0% | |
| AACTAATTGCACAGTTTGTA+GGG | + | chr4.4:33703410-33703429 | None:intergenic | 30.0% | |
| AATCCAGTATCCTTCTTATA+GGG | - | chr4.4:33702950-33702969 | MS.gene052336:intron | 30.0% | |
| AATGGAACATGCAAAAAAAG+TGG | + | chr4.4:33703222-33703241 | None:intergenic | 30.0% | |
| ATGTGTACCATATAAGAATG+GGG | - | chr4.4:33701131-33701150 | MS.gene052336:intron | 30.0% | |
| ATGTTCATGTATCAGATTCA+AGG | + | chr4.4:33703515-33703534 | None:intergenic | 30.0% | |
| ATTGTCCATTATGACTTTAC+AGG | - | chr4.4:33702650-33702669 | MS.gene052336:CDS | 30.0% | |
| ATTTAATTACGGAGAAGGAA+AGG | + | chr4.4:33703261-33703280 | None:intergenic | 30.0% | |
| CAAGACAACAGATGTAAAAT+AGG | + | chr4.4:33702098-33702117 | None:intergenic | 30.0% | |
| CATCAGGATATCATAATGTT+GGG | + | chr4.4:33704272-33704291 | None:intergenic | 30.0% | |
| CTTCTACAAATATGCTAATC+TGG | - | chr4.4:33703146-33703165 | MS.gene052336:intron | 30.0% | |
| CTTCTTAAATTAAGTGTGCA+AGG | + | chr4.4:33703565-33703584 | None:intergenic | 30.0% | |
| GATTATAATGAGAAGACCAA+AGG | + | chr4.4:33700770-33700789 | None:intergenic | 30.0% | |
| GGGAAAAACAGAAGAAAAAA+TGG | + | chr4.4:33703240-33703259 | None:intergenic | 30.0% | |
| GGTAATATCATTTAAGCGTT+TGG | - | chr4.4:33702048-33702067 | MS.gene052336:CDS | 30.0% | |
| GTATGTGTACCATATAAGAA+TGG | - | chr4.4:33701129-33701148 | MS.gene052336:intron | 30.0% | |
| TAACTAATTGCACAGTTTGT+AGG | + | chr4.4:33703411-33703430 | None:intergenic | 30.0% | |
| TACATCTACTTCAGAGTTAT+GGG | - | chr4.4:33702782-33702801 | MS.gene052336:intron | 30.0% | |
| TATCAGATTTATGTCCAGAT+AGG | - | chr4.4:33701491-33701510 | MS.gene052336:intron | 30.0% | |
| TCATCAGGATATCATAATGT+TGG | + | chr4.4:33704273-33704292 | None:intergenic | 30.0% | |
| TTATCAACAAAACTATTCCC+TGG | + | chr4.4:33704314-33704333 | None:intergenic | 30.0% | |
| TTGTATTTGGATAGTGCAAA+GGG | - | chr4.4:33701975-33701994 | MS.gene052336:intron | 30.0% | |
| TTTAATTACGGAGAAGGAAA+GGG | + | chr4.4:33703260-33703279 | None:intergenic | 30.0% | |
| TTTAATTGGACACCTAAATG+AGG | - | chr4.4:33703976-33703995 | MS.gene052336:intron | 30.0% | |
| TTTGCTAATCCACTGTAATT+AGG | - | chr4.4:33700877-33700896 | MS.gene052336:intron | 30.0% | |
| TTTGTATTTGGATAGTGCAA+AGG | - | chr4.4:33701974-33701993 | MS.gene052336:intron | 30.0% | |
| ! | TTAGTTCTTGTTGTCTTTAG+TGG | - | chr4.4:33701060-33701079 | MS.gene052336:intron | 30.0% |
| !! | CTTAAATCATCACTTTTGGA+GGG | - | chr4.4:33703050-33703069 | MS.gene052336:CDS | 30.0% |
| !!! | ATGATAGCCTTATTCAGTTT+TGG | - | chr4.4:33701901-33701920 | MS.gene052336:intron | 30.0% |
| !!! | GTTACTTTTGTGATAATCCA+GGG | - | chr4.4:33704294-33704313 | MS.gene052336:CDS | 30.0% |
| AATTTACTAACGACGTCGTT+TGG | - | chr4.4:33701329-33701348 | MS.gene052336:intron | 35.0% | |
| ATAGGCCTGTAAAGTCATAA+TGG | + | chr4.4:33702658-33702677 | None:intergenic | 35.0% | |
| ATCACAAAAGTAACCTCATC+AGG | + | chr4.4:33704288-33704307 | None:intergenic | 35.0% | |
| ATTAGACACGAGATACACAA+AGG | - | chr4.4:33704039-33704058 | MS.gene052336:intron | 35.0% | |
| CAATCCAGTATCCTTCTTAT+AGG | - | chr4.4:33702949-33702968 | MS.gene052336:intron | 35.0% | |
| CCAAAAGTGATGATTTAAGC+TGG | + | chr4.4:33703049-33703068 | None:intergenic | 35.0% | |
| CTATAGACAGACTATTGTTG+AGG | - | chr4.4:33703600-33703619 | MS.gene052336:intron | 35.0% | |
| CTCAACAATAGTCTGTCTAT+AGG | + | chr4.4:33703602-33703621 | None:intergenic | 35.0% | |
| CTTAGGAGTTATCTCTTACT+AGG | + | chr4.4:33704153-33704172 | None:intergenic | 35.0% | |
| GAAGAGACCAAAACTGAATA+AGG | + | chr4.4:33701911-33701930 | None:intergenic | 35.0% | |
| GAAGGAGTCTGTTAATTATC+AGG | - | chr4.4:33701791-33701810 | MS.gene052336:intron | 35.0% | |
| GATACTACACAAAAGAGTTG+TGG | - | chr4.4:33703889-33703908 | MS.gene052336:intron | 35.0% | |
| GGAATTGATAAAACTCCGTT+TGG | + | chr4.4:33700726-33700745 | None:intergenic | 35.0% | |
| GTACATCTACTTCAGAGTTA+TGG | - | chr4.4:33702781-33702800 | MS.gene052336:intron | 35.0% | |
| GTAGGGAAGCAAATAAAGAA+AGG | + | chr4.4:33703393-33703412 | None:intergenic | 35.0% | |
| GTCAAAGATCCTAATTACAG+TGG | + | chr4.4:33700889-33700908 | None:intergenic | 35.0% | |
| GTCTGAATAGTTCAAATGCA+GGG | + | chr4.4:33703694-33703713 | None:intergenic | 35.0% | |
| TATTAGGTCCTTCCTTGTAA+TGG | - | chr4.4:33702611-33702630 | MS.gene052336:CDS | 35.0% | |
| TCCTAAGCGCTTGTATAAAT+GGG | + | chr4.4:33703099-33703118 | None:intergenic | 35.0% | |
| TGAAACATAAGGAAATGCCA+TGG | + | chr4.4:33702400-33702419 | None:intergenic | 35.0% | |
| TGTACATCCCCATTCTTATA+TGG | + | chr4.4:33701141-33701160 | None:intergenic | 35.0% | |
| TGTCTATAGGCATGTATACA+AGG | + | chr4.4:33703589-33703608 | None:intergenic | 35.0% | |
| TTCCTTCTTCTTGGTCAAAT+AGG | + | chr4.4:33702676-33702695 | None:intergenic | 35.0% | |
| TTTATGTGTCAGATATCTCG+AGG | - | chr4.4:33702925-33702944 | MS.gene052336:intron | 35.0% | |
| TTTCTGTGTAAACCTGATTC+AGG | - | chr4.4:33702289-33702308 | MS.gene052336:intron | 35.0% | |
| ! | AACTCTTTTGTGTAGTATCG+TGG | + | chr4.4:33703888-33703907 | None:intergenic | 35.0% |
| ! | ATTTGTCACTTATCCGTTGT+GGG | - | chr4.4:33701352-33701371 | MS.gene052336:intron | 35.0% |
| ! | CCAGCTTAAATCATCACTTT+TGG | - | chr4.4:33703046-33703065 | MS.gene052336:CDS | 35.0% |
| ! | CTCGGCTCTCTATTTAAAAT+AGG | - | chr4.4:33701188-33701207 | MS.gene052336:intron | 35.0% |
| ! | TATACGTCTTGTCTGGATTT+TGG | - | chr4.4:33703664-33703683 | MS.gene052336:intron | 35.0% |
| ! | TGACTTTGTTGATAGAGTGT+TGG | - | chr4.4:33704241-33704260 | MS.gene052336:intron | 35.0% |
| ! | TTCTAGCAGAAAGTACATCA+GGG | - | chr4.4:33702985-33703004 | MS.gene052336:intron | 35.0% |
| ! | TTCTATCATTGCTGTTACTG+CGG | - | chr4.4:33701928-33701947 | MS.gene052336:intron | 35.0% |
| ! | TTTCTAGCAGAAAGTACATC+AGG | - | chr4.4:33702984-33703003 | MS.gene052336:intron | 35.0% |
| !! | GCTTAAATCATCACTTTTGG+AGG | - | chr4.4:33703049-33703068 | MS.gene052336:CDS | 35.0% |
| !! | GCTTCACTTTTCATTCCAAA+CGG | - | chr4.4:33700708-33700727 | MS.gene052336:CDS | 35.0% |
| !!! | ATTTTTTATGTAAGTGGGGG+TGG | - | chr4.4:33701561-33701580 | MS.gene052336:intron | 35.0% |
| !!! | GGTTACTTTTGTGATAATCC+AGG | - | chr4.4:33704293-33704312 | MS.gene052336:CDS | 35.0% |
| !!! | TTTTTTATGTAAGTGGGGGT+GGG | - | chr4.4:33701562-33701581 | MS.gene052336:intron | 35.0% |
| AACTTCTAGCCACTATTGCA+TGG | - | chr4.4:33703447-33703466 | MS.gene052336:intron | 40.0% | |
| AAGAATGGGGATGTACATAC+TGG | - | chr4.4:33701144-33701163 | MS.gene052336:intron | 40.0% | |
| AAGAGTCCTGTTCATGACAA+TGG | + | chr4.4:33702359-33702378 | None:intergenic | 40.0% | |
| AATTCCTAAATCATCTCCGC+AGG | + | chr4.4:33702475-33702494 | None:intergenic | 40.0% | |
| ACAACATGCATGAGAACACT+CGG | + | chr4.4:33702835-33702854 | None:intergenic | 40.0% | |
| ACCAATTCTACAGCTTGTGA+TGG | - | chr4.4:33703017-33703036 | MS.gene052336:intron | 40.0% | |
| ACCTGATTCAGGATAGCTAA+TGG | - | chr4.4:33702300-33702319 | MS.gene052336:intron | 40.0% | |
| ACGTGTAAGACACCTCATTT+AGG | + | chr4.4:33703991-33704010 | None:intergenic | 40.0% | |
| AGCATCATGCAACCATTACA+AGG | + | chr4.4:33702626-33702645 | None:intergenic | 40.0% | |
| AGCTCTTTCATACTTGCTCA+AGG | - | chr4.4:33702230-33702249 | MS.gene052336:intron | 40.0% | |
| ATGAGAAGACCAAAGGAAAG+CGG | + | chr4.4:33700763-33700782 | None:intergenic | 40.0% | |
| CAAATGGTATACGTCTTGTC+TGG | - | chr4.4:33703657-33703676 | MS.gene052336:intron | 40.0% | |
| CAAGGAAAGACAGTTGTACA+AGG | + | chr4.4:33703480-33703499 | None:intergenic | 40.0% | |
| CAATTCCCATCATACAGCAA+AGG | + | chr4.4:33704350-33704369 | None:intergenic | 40.0% | |
| CACTTCATATGCATGCTTGT+AGG | - | chr4.4:33703299-33703318 | MS.gene052336:intron | 40.0% | |
| CATTCTCCATTGTCATGAAC+AGG | - | chr4.4:33702350-33702369 | MS.gene052336:CDS | 40.0% | |
| CCACAAAGGGAAAACAGATT+TGG | - | chr4.4:33702701-33702720 | MS.gene052336:intron | 40.0% | |
| CTCCTAAGCGCTTGTATAAA+TGG | + | chr4.4:33703100-33703119 | None:intergenic | 40.0% | |
| CTTCTTATAGGGATCTGCAA+AGG | - | chr4.4:33702961-33702980 | MS.gene052336:intron | 40.0% | |
| CTTTGCAGATCCCTATAAGA+AGG | + | chr4.4:33702963-33702982 | None:intergenic | 40.0% | |
| GACAAGACGTATACCATTTG+AGG | + | chr4.4:33703657-33703676 | None:intergenic | 40.0% | |
| GATCCCTATAAGAAGGATAC+TGG | + | chr4.4:33702956-33702975 | None:intergenic | 40.0% | |
| GATCTGGCACTTCTATTTGT+CGG | - | chr4.4:33702019-33702038 | MS.gene052336:CDS | 40.0% | |
| GCAACGATCAAAGCAAGTAA+CGG | + | chr4.4:33700690-33700709 | None:intergenic | 40.0% | |
| GGTCTGAATAGTTCAAATGC+AGG | + | chr4.4:33703695-33703714 | None:intergenic | 40.0% | |
| GTGATTATACAAATTGGGGG+TGG | - | chr4.4:33701460-33701479 | MS.gene052336:intron | 40.0% | |
| GTGCAAAGGGAAGAAATTTC+AGG | - | chr4.4:33701988-33702007 | MS.gene052336:intron | 40.0% | |
| GTTGACAGAACACAATCTGA+AGG | - | chr4.4:33702759-33702778 | MS.gene052336:intron | 40.0% | |
| TCATGCAACCATTACAAGGA+AGG | + | chr4.4:33702622-33702641 | None:intergenic | 40.0% | |
| TCCATCACAAGCTGTAGAAT+TGG | + | chr4.4:33703021-33703040 | None:intergenic | 40.0% | |
| TCCATTAGCTATCCTGAATC+AGG | + | chr4.4:33702304-33702323 | None:intergenic | 40.0% | |
| TCCTCTGATGCTGAAACATA+AGG | + | chr4.4:33702411-33702430 | None:intergenic | 40.0% | |
| TCCTTATGTTTCAGCATCAG+AGG | - | chr4.4:33702407-33702426 | MS.gene052336:intron | 40.0% | |
| TCTGAAGACTGTAACTGCAA+AGG | + | chr4.4:33702183-33702202 | None:intergenic | 40.0% | |
| TGCATCAACTGATCCTCAAA+TGG | - | chr4.4:33703641-33703660 | MS.gene052336:intron | 40.0% | |
| TGCGGAGATGATTTAGGAAT+TGG | - | chr4.4:33702474-33702493 | MS.gene052336:intron | 40.0% | |
| TGTGAACTTGGAAGACTCAT+TGG | - | chr4.4:33702431-33702450 | MS.gene052336:intron | 40.0% | |
| ! | CAGATAAAACGGACTTTGCT+AGG | + | chr4.4:33701833-33701852 | None:intergenic | 40.0% |
| ! | CCAAATCTGTTTTCCCTTTG+TGG | + | chr4.4:33702704-33702723 | None:intergenic | 40.0% |
| ! | GATTTGGTTGTGTTCTGCAA+TGG | - | chr4.4:33702717-33702736 | MS.gene052336:intron | 40.0% |
| ! | GATTTGTCACTTATCCGTTG+TGG | - | chr4.4:33701351-33701370 | MS.gene052336:intron | 40.0% |
| !! | AAGTCCGTTTTATCTGAAGC+AGG | - | chr4.4:33701837-33701856 | MS.gene052336:intron | 40.0% |
| !! | ACTTTTGGAGGGACTTTTAG+TGG | - | chr4.4:33703061-33703080 | MS.gene052336:CDS | 40.0% |
| !! | GCTCTAATATAGCTCTGACA+CGG | + | chr4.4:33703938-33703957 | None:intergenic | 40.0% |
| !! | TAGACTTTAGCTCTCCTATC+TGG | + | chr4.4:33701508-33701527 | None:intergenic | 40.0% |
| !! | TTGGAAGACTCATTGGTTTC+AGG | - | chr4.4:33702438-33702457 | MS.gene052336:intron | 40.0% |
| !!! | TTTTTGAGGCCCATAGCTTT+TGG | - | chr4.4:33701601-33701620 | MS.gene052336:intron | 40.0% |
| AAAGCGGGAACTGTAGTAGA+GGG | + | chr4.4:33700747-33700766 | None:intergenic | 45.0% | |
| AAGAAGGAAGAGAGCCACAA+AGG | - | chr4.4:33702687-33702706 | MS.gene052336:CDS | 45.0% | |
| ACAAGAGACATGAATACGCG+AGG | + | chr4.4:33701688-33701707 | None:intergenic | 45.0% | |
| ACTTCTATTTGTCGGTGGAG+AGG | - | chr4.4:33702027-33702046 | MS.gene052336:CDS | 45.0% | |
| AGAAGGAAGAGAGCCACAAA+GGG | - | chr4.4:33702688-33702707 | MS.gene052336:CDS | 45.0% | |
| AGCATCAGAGGATGTGAACT+TGG | - | chr4.4:33702419-33702438 | MS.gene052336:intron | 45.0% | |
| AGCCTCCTATTTCATAGGGA+CGG | + | chr4.4:33701170-33701189 | None:intergenic | 45.0% | |
| ATATCTTGCTGGACCTTTGC+AGG | - | chr4.4:33701751-33701770 | MS.gene052336:intron | 45.0% | |
| ATCAGCTCTGTAGAGGAATC+TGG | - | chr4.4:33702885-33702904 | MS.gene052336:intron | 45.0% | |
| ATTTCAGGATCCTCTCGATC+TGG | - | chr4.4:33702003-33702022 | MS.gene052336:CDS | 45.0% | |
| CACTTATCCGTTGTGGGAAA+GGG | - | chr4.4:33701358-33701377 | MS.gene052336:intron | 45.0% | |
| CCAGCCTGCTTCAGATAAAA+CGG | + | chr4.4:33701844-33701863 | None:intergenic | 45.0% | |
| CTCTACAGAGCTGATAAGCT+CGG | + | chr4.4:33702880-33702899 | None:intergenic | 45.0% | |
| CTGAAAGGACCTATGTTGTG+GGG | + | chr4.4:33700935-33700954 | None:intergenic | 45.0% | |
| GCCCATTTATACAAGCGCTT+AGG | - | chr4.4:33703095-33703114 | MS.gene052336:intron | 45.0% | |
| GCTGAAAGGACCTATGTTGT+GGG | + | chr4.4:33700936-33700955 | None:intergenic | 45.0% | |
| GGAAAGATGCCATGCAATAG+TGG | + | chr4.4:33703459-33703478 | None:intergenic | 45.0% | |
| GGCAGATGGTAAGATCATGT+CGG | + | chr4.4:33702814-33702833 | None:intergenic | 45.0% | |
| GGCCTATTTGACCAAGAAGA+AGG | - | chr4.4:33702671-33702690 | MS.gene052336:CDS | 45.0% | |
| GGTGTCTTACACGTGTCATA+CGG | - | chr4.4:33703997-33704016 | MS.gene052336:intron | 45.0% | |
| GTGGGAAAGGGAAAAACGAA+TGG | - | chr4.4:33701370-33701389 | MS.gene052336:intron | 45.0% | |
| GTGTCTTACACGTGTCATAC+GGG | - | chr4.4:33703998-33704017 | MS.gene052336:intron | 45.0% | |
| TATCTTGCTGGACCTTTGCA+GGG | - | chr4.4:33701752-33701771 | MS.gene052336:intron | 45.0% | |
| TCAAGGACAGCAGTTCTACA+AGG | + | chr4.4:33703498-33703517 | None:intergenic | 45.0% | |
| TCACTTATCCGTTGTGGGAA+AGG | - | chr4.4:33701357-33701376 | MS.gene052336:intron | 45.0% | |
| TCAGCTCTGTAGAGGAATCT+GGG | - | chr4.4:33702886-33702905 | MS.gene052336:intron | 45.0% | |
| TCCCTATGAAATAGGAGGCT+CGG | - | chr4.4:33701170-33701189 | MS.gene052336:intron | 45.0% | |
| TGACTCCCCAACAAGATTTG+AGG | - | chr4.4:33704368-33704387 | MS.gene052336:CDS | 45.0% | |
| TGAGAAGACCAAAGGAAAGC+GGG | + | chr4.4:33700762-33700781 | None:intergenic | 45.0% | |
| TGTCAGACTTATCCTCGAGT+CGG | - | chr4.4:33700960-33700979 | MS.gene052336:intron | 45.0% | |
| TGTGAGATCCAACACTTCCA+TGG | - | chr4.4:33702380-33702399 | MS.gene052336:CDS | 45.0% | |
| TTCCTTGGATCTTGCTCCAT+GGG | - | chr4.4:33702507-33702526 | MS.gene052336:intron | 45.0% | |
| TTTCCTTGGATCTTGCTCCA+TGG | - | chr4.4:33702506-33702525 | MS.gene052336:intron | 45.0% | |
| ! | ACGGACTTTGCTAGGTCTTT+TGG | + | chr4.4:33701825-33701844 | None:intergenic | 45.0% |
| ! | AGGAAATGCCATGGAAGTGT+TGG | + | chr4.4:33702391-33702410 | None:intergenic | 45.0% |
| ! | ATTGGCAACGTTGCTTTCCT+TGG | - | chr4.4:33702492-33702511 | MS.gene052336:intron | 45.0% |
| ! | CGTTTTTCCCTTTCCCACAA+CGG | + | chr4.4:33701368-33701387 | None:intergenic | 45.0% |
| ! | GCAGAAAGTACATCAGGGAA+TGG | - | chr4.4:33702990-33703009 | MS.gene052336:intron | 45.0% |
| !! | AATAGAAGTGCCAGATCGAG+AGG | + | chr4.4:33702016-33702035 | None:intergenic | 45.0% |
| !! | AGCAGGCTGGTCAAATTTTC+TGG | - | chr4.4:33701854-33701873 | MS.gene052336:intron | 45.0% |
| !! | ATAAAACTGATGCCGACTCG+AGG | + | chr4.4:33700975-33700994 | None:intergenic | 45.0% |
| !! | GGTCTCAGAGAATGGATTGA+AGG | - | chr4.4:33701773-33701792 | MS.gene052336:intron | 45.0% |
| !!! | AAAAAAGAATTATTTTTAAT+TGG | - | chr4.4:33703962-33703981 | MS.gene052336:intron | 5.0% |
| ACTGGCCGTCCCTATGAAAT+AGG | - | chr4.4:33701162-33701181 | MS.gene052336:intron | 50.0% | |
| ACTGTGTATGTATGCAGGCC+CGG | + | chr4.4:33701665-33701684 | None:intergenic | 50.0% | |
| AGCCGAGCCTCCTATTTCAT+AGG | + | chr4.4:33701175-33701194 | None:intergenic | 50.0% | |
| ATTCCTGTCAACGAGTGCAG+TGG | - | chr4.4:33702127-33702146 | MS.gene052336:CDS | 50.0% | |
| CAGCTCTGTAGAGGAATCTG+GGG | - | chr4.4:33702887-33702906 | MS.gene052336:intron | 50.0% | |
| CCTATGTTGTGGGGATACCT+TGG | + | chr4.4:33700926-33700945 | None:intergenic | 50.0% | |
| CGAGCTTATCAGCTCTGTAG+AGG | - | chr4.4:33702878-33702897 | MS.gene052336:intron | 50.0% | |
| CGAGGACTGTGTATGTATGC+AGG | + | chr4.4:33701670-33701689 | None:intergenic | 50.0% | |
| CTACAGTTCCCGCTTTCCTT+TGG | - | chr4.4:33700751-33700770 | MS.gene052336:intron | 50.0% | |
| CTCGAGGATAAGTCTGACAG+CGG | + | chr4.4:33700959-33700978 | None:intergenic | 50.0% | |
| CTGGCACTTCTATTTGTCGG+TGG | - | chr4.4:33702022-33702041 | MS.gene052336:CDS | 50.0% | |
| CTTTGCAGGGTCTCAGAGAA+TGG | - | chr4.4:33701765-33701784 | MS.gene052336:intron | 50.0% | |
| GAAAGCGGGAACTGTAGTAG+AGG | + | chr4.4:33700748-33700767 | None:intergenic | 50.0% | |
| GAAGCCTGCGGAGATGATTT+AGG | - | chr4.4:33702468-33702487 | MS.gene052336:intron | 50.0% | |
| GACGAGTTCTCTCAGAAGCA+AGG | + | chr4.4:33704068-33704087 | None:intergenic | 50.0% | |
| GCCGAGCCTCCTATTTCATA+GGG | + | chr4.4:33701174-33701193 | None:intergenic | 50.0% | |
| GGCTGAAAGGACCTATGTTG+TGG | + | chr4.4:33700937-33700956 | None:intergenic | 50.0% | |
| GTGGCGCCTCAAATCTTGTT+GGG | + | chr4.4:33704377-33704396 | None:intergenic | 50.0% | |
| GTGGCTCTCTTCCTTCTTCT+TGG | + | chr4.4:33702685-33702704 | None:intergenic | 50.0% | |
| TACACGTGTCATACGGGTGT+TGG | - | chr4.4:33704004-33704023 | MS.gene052336:intron | 50.0% | |
| TAGGATCTTTGACCCCCAGT+AGG | - | chr4.4:33700896-33700915 | MS.gene052336:intron | 50.0% | |
| TCGAGGATAAGTCTGACAGC+GGG | + | chr4.4:33700958-33700977 | None:intergenic | 50.0% | |
| TGGCGCCTCAAATCTTGTTG+GGG | + | chr4.4:33704376-33704395 | None:intergenic | 50.0% | |
| TGTGGCGCCTCAAATCTTGT+TGG | + | chr4.4:33704378-33704397 | None:intergenic | 50.0% | |
| TTCGCGATTTCCATCACCCA+TGG | + | chr4.4:33702526-33702545 | None:intergenic | 50.0% | |
| ! | ATACCTTGGAGTGCCTACTG+GGG | + | chr4.4:33700912-33700931 | None:intergenic | 50.0% |
| ! | ATCGGGCCTTTGCTGTATGA+TGG | - | chr4.4:33704341-33704360 | MS.gene052336:CDS | 50.0% |
| ! | CCAAGGTATCCCCACAACAT+AGG | - | chr4.4:33700923-33700942 | MS.gene052336:intron | 50.0% |
| ! | GATACCTTGGAGTGCCTACT+GGG | + | chr4.4:33700913-33700932 | None:intergenic | 50.0% |
| ! | TCGGGCCTTTGCTGTATGAT+GGG | - | chr4.4:33704342-33704361 | MS.gene052336:CDS | 50.0% |
| ! | TGCAAGGTGCTCAATCAAGC+CGG | + | chr4.4:33701631-33701650 | None:intergenic | 50.0% |
| ! | TTGAGGCCCATAGCTTTTGG+AGG | - | chr4.4:33701604-33701623 | MS.gene052336:intron | 50.0% |
| !! | CATTCTCTGAGACCCTGCAA+AGG | + | chr4.4:33701767-33701786 | None:intergenic | 50.0% |
| !! | CCGTTTTATCTGAAGCAGGC+TGG | - | chr4.4:33701841-33701860 | MS.gene052336:intron | 50.0% |
| ACCTTGCATTCCCTCAAGGC+CGG | - | chr4.4:33701643-33701662 | MS.gene052336:intron | 55.0% | |
| ATGCCACTGCACTCGTTGAC+AGG | + | chr4.4:33702133-33702152 | None:intergenic | 55.0% | |
| CACCCATGGAGCAAGATCCA+AGG | + | chr4.4:33702512-33702531 | None:intergenic | 55.0% | |
| GAGCACCTTGCATTCCCTCA+AGG | - | chr4.4:33701639-33701658 | MS.gene052336:intron | 55.0% | |
| GCATGAGAACACTCGGCAGA+TGG | + | chr4.4:33702828-33702847 | None:intergenic | 55.0% | |
| GGATCTTGCTCCATGGGTGA+TGG | - | chr4.4:33702513-33702532 | MS.gene052336:CDS | 55.0% | |
| GGCCGTCCCTATGAAATAGG+AGG | - | chr4.4:33701165-33701184 | MS.gene052336:intron | 55.0% | |
| TCAGGATTCGCTGAAGCCTG+CGG | - | chr4.4:33702456-33702475 | MS.gene052336:intron | 55.0% | |
| ! | GCAAGGTGCTCAATCAAGCC+GGG | + | chr4.4:33701630-33701649 | None:intergenic | 55.0% |
| ! | GGATACCTTGGAGTGCCTAC+TGG | + | chr4.4:33700914-33700933 | None:intergenic | 55.0% |
| ! | TACCTTGGAGTGCCTACTGG+GGG | + | chr4.4:33700911-33700930 | None:intergenic | 55.0% |
| !! | AAGTCTGACAGCGGGCTGAA+AGG | + | chr4.4:33700950-33700969 | None:intergenic | 55.0% |
| ACGGACAGACACCGTTCTGG+CGG | + | chr4.4:33703919-33703938 | None:intergenic | 60.0% | |
| AGCCGGGCCTCCAAAAGCTA+TGG | + | chr4.4:33701614-33701633 | None:intergenic | 60.0% | |
| CCTTGCATTCCCTCAAGGCC+GGG | - | chr4.4:33701644-33701663 | MS.gene052336:intron | 60.0% | |
| GACACGGACAGACACCGTTC+TGG | + | chr4.4:33703922-33703941 | None:intergenic | 60.0% | |
| GCCGGGCCTCCAAAAGCTAT+GGG | + | chr4.4:33701613-33701632 | None:intergenic | 60.0% | |
| GTTGTGGCTTCCCGCCAGAA+CGG | - | chr4.4:33703905-33703924 | MS.gene052336:intron | 60.0% | |
| !! | GCCCATAGCTTTTGGAGGCC+CGG | - | chr4.4:33701609-33701628 | MS.gene052336:intron | 60.0% |
| CCCGGCCTTGAGGGAATGCA+AGG | + | chr4.4:33701647-33701666 | None:intergenic | 65.0% | |
| CGGACAGACACCGTTCTGGC+GGG | + | chr4.4:33703918-33703937 | None:intergenic | 65.0% | |
| GACCCCCAGTAGGCACTCCA+AGG | - | chr4.4:33700906-33700925 | MS.gene052336:intron | 65.0% | |
| GTATGCAGGCCCGGCCTTGA+GGG | + | chr4.4:33701656-33701675 | None:intergenic | 65.0% | |
| TGTATGCAGGCCCGGCCTTG+AGG | + | chr4.4:33701657-33701676 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 33700678 | 33704404 | 33700678 | ID=MS.gene052336 |
| chr4.4 | mRNA | 33700678 | 33704404 | 33700678 | ID=MS.gene052336.t1;Parent=MS.gene052336 |
| chr4.4 | exon | 33704292 | 33704404 | 33704292 | ID=MS.gene052336.t1.exon1;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33704292 | 33704404 | 33704292 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33703207 | 33703309 | 33703207 | ID=MS.gene052336.t1.exon2;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33703207 | 33703309 | 33703207 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33703034 | 33703093 | 33703034 | ID=MS.gene052336.t1.exon3;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33703034 | 33703093 | 33703034 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33702831 | 33702893 | 33702831 | ID=MS.gene052336.t1.exon4;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33702831 | 33702893 | 33702831 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33702510 | 33702710 | 33702510 | ID=MS.gene052336.t1.exon5;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33702510 | 33702710 | 33702510 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33702302 | 33702410 | 33702302 | ID=MS.gene052336.t1.exon6;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33702302 | 33702410 | 33702302 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33702000 | 33702217 | 33702000 | ID=MS.gene052336.t1.exon7;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33702000 | 33702217 | 33702000 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| chr4.4 | exon | 33700678 | 33700767 | 33700678 | ID=MS.gene052336.t1.exon8;Parent=MS.gene052336.t1 |
| chr4.4 | CDS | 33700678 | 33700767 | 33700678 | ID=cds.MS.gene052336.t1;Parent=MS.gene052336.t1 |
| Gene Sequence |
| Protein sequence |
