Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052419.t1 | XP_013453051.1 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 1.10E-202 | 715.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052419.t1 | P70122 | 50.8 | 246 | 118 | 2 | 4 | 247 | 2 | 246 | 4.9e-63 | 243.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052419.t1 | A0A072UBA1 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 7.8e-203 | 715.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052419.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052419 | MS.gene63456 | 0.840133 | 1.04E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052419.t1 | MTR_6g085170 | 98.883 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052419.t1 | AT1G43860 | 62.803 | 371 | 124 | 6 | 1 | 358 | 1 | 370 | 2.13e-167 | 472 |
| MS.gene052419.t1 | AT1G43860 | 57.681 | 345 | 123 | 7 | 27 | 358 | 1 | 335 | 3.84e-136 | 391 |
Find 80 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACGACAATGTCTCGTTCTT+TGG | 0.242477 | 6.1:+74691949 | None:intergenic |
| GCACGGATTCAGAAGTTCTT+TGG | 0.262575 | 6.1:-74696351 | None:intergenic |
| CACGGATTCAGAAGTTCTTT+GGG | 0.284543 | 6.1:-74696350 | None:intergenic |
| ACAGGCTCTGGAGTTGATTC+AGG | 0.285367 | 6.1:+74694894 | MS.gene052419:intron |
| TCATTCCAGTATTTGCTTAG+AGG | 0.304623 | 6.1:+74692282 | MS.gene052419:CDS |
| ATTGGAGCCTGGTCTGTATA+AGG | 0.329038 | 6.1:+74696204 | MS.gene052419:CDS |
| TGCTTCTTGGAGGTGCTGTT+TGG | 0.331667 | 6.1:-74694782 | None:intergenic |
| CAATGCTGTCTAGTCAGTTC+AGG | 0.331986 | 6.1:+74694651 | MS.gene052419:CDS |
| AGGTGTTCTTGCTAAGTCTA+AGG | 0.333707 | 6.1:+74692231 | MS.gene052419:CDS |
| ACCCTAACACCGTTCTTTCA+TGG | 0.342417 | 6.1:+74692056 | MS.gene052419:CDS |
| CGCCATGAAAGAACGGTGTT+AGG | 0.353355 | 6.1:-74692058 | None:intergenic |
| GGAGGAAGTACCTATCCTTT+TGG | 0.369437 | 6.1:+74694978 | MS.gene052419:CDS |
| CTCACTCTCTTTATGTGGAT+GGG | 0.371029 | 6.1:+74696278 | MS.gene052419:CDS |
| TTTAAAGAAAGGGGAACTTC+AGG | 0.373529 | 6.1:+74694607 | MS.gene052419:CDS |
| AGAAGAGTGCACAGCAGATA+TGG | 0.383434 | 6.1:+74696573 | MS.gene052419:CDS |
| ACAAACCTCTAAGCAAATAC+TGG | 0.388442 | 6.1:-74692287 | None:intergenic |
| TGAATCAAAATCTGATTTGA+AGG | 0.396855 | 6.1:+74696603 | MS.gene052419:CDS |
| GCTCACTCTCTTTATGTGGA+TGG | 0.397818 | 6.1:+74696277 | MS.gene052419:CDS |
| AAAGGGGAACTTCAGGTTGC+TGG | 0.407398 | 6.1:+74694614 | MS.gene052419:CDS |
| ACCGTTCTTTCATGGCGTTC+CGG | 0.423741 | 6.1:+74692064 | MS.gene052419:CDS |
| AGGATAGGTACTTCCTCCTC+AGG | 0.427749 | 6.1:-74694973 | None:intergenic |
| TGTTGTCCCTCAGTAGGCTT+AGG | 0.430168 | 6.1:-74696418 | None:intergenic |
| TTGAAGATGCTAAGTTGTAC+AGG | 0.433138 | 6.1:+74696479 | MS.gene052419:CDS |
| TGTCCCTTCTTTAGAAATAA+CGG | 0.436135 | 6.1:-74695025 | None:intergenic |
| TCTTGCTCACTCTCTTTATG+TGG | 0.440257 | 6.1:+74696273 | MS.gene052419:CDS |
| TCAATCATGCTGATAGTGTA+AGG | 0.442974 | 6.1:-74694725 | None:intergenic |
| AAGGATTTGAATGCGGCGTT+TGG | 0.443098 | 6.1:+74692250 | MS.gene052419:CDS |
| CAAAAGCAAACAATTTCGTC+TGG | 0.443371 | 6.1:+74696394 | MS.gene052419:CDS |
| GTTCTTTGGGGCAATGGTGC+AGG | 0.443834 | 6.1:-74696337 | None:intergenic |
| TCAGAAGTTCTTTGGGGCAA+TGG | 0.449572 | 6.1:-74696343 | None:intergenic |
| AGGACAAGATACCTGCTTCT+TGG | 0.450486 | 6.1:-74694795 | None:intergenic |
| GCAACCGTTATTTCTAAAGA+AGG | 0.452079 | 6.1:+74695021 | MS.gene052419:CDS |
| GCAGCAGCGCGTACCCTCAA+TGG | 0.474471 | 6.1:-74694949 | None:intergenic |
| GTGCACTCTTCTTCAGATAG+TGG | 0.490526 | 6.1:-74696562 | None:intergenic |
| TTTGGTTGTTGTCCCTCAGT+AGG | 0.497330 | 6.1:-74696424 | None:intergenic |
| AGTGTAAGGGCGCTTAGTCT+CGG | 0.500797 | 6.1:-74694711 | None:intergenic |
| TCACTCTCTTTATGTGGATG+GGG | 0.502380 | 6.1:+74696279 | MS.gene052419:CDS |
| GCCATGAAAGAACGGTGTTA+GGG | 0.509375 | 6.1:-74692057 | None:intergenic |
| ACGCGCTGCTGCCCCTGAGG+AGG | 0.512519 | 6.1:+74694960 | MS.gene052419:CDS |
| ACAAGATACCTGCTTCTTGG+AGG | 0.519410 | 6.1:-74694792 | None:intergenic |
| GTGTAAGGGCGCTTAGTCTC+GGG | 0.522577 | 6.1:-74694710 | None:intergenic |
| CGTTCTTTGGTTCAACCAGT+AGG | 0.523435 | 6.1:+74691962 | MS.gene052419:CDS |
| CTATAAAACGGTGTCCATTG+AGG | 0.535043 | 6.1:+74694935 | MS.gene052419:CDS |
| AAACAGCACCTCCAAGAAGC+AGG | 0.539561 | 6.1:+74694784 | MS.gene052419:CDS |
| TGTTTGGATCAACAGCGAAA+TGG | 0.541879 | 6.1:-74694766 | None:intergenic |
| TATAAAACGGTGTCCATTGA+GGG | 0.542061 | 6.1:+74694936 | MS.gene052419:CDS |
| TGAAGTGTTGCAGTCACATA+CGG | 0.542659 | 6.1:+74692189 | MS.gene052419:CDS |
| AGAAGCACTACCCTATAAAA+CGG | 0.553845 | 6.1:+74694923 | MS.gene052419:CDS |
| AAAAGTCTTGTGCATTACAA+TGG | 0.555238 | 6.1:-74694684 | None:intergenic |
| AATGCTGTCTAGTCAGTTCA+GGG | 0.557997 | 6.1:+74694652 | MS.gene052419:CDS |
| GCTTGTGCCACTCACTCTTG+TGG | 0.558268 | 6.1:-74696507 | None:intergenic |
| CAACCGTTATTTCTAAAGAA+GGG | 0.568663 | 6.1:+74695022 | MS.gene052419:CDS |
| GCATGATTGAACGCCTCATG+AGG | 0.570502 | 6.1:+74694738 | MS.gene052419:CDS |
| GGAAAAGCTGAGCGAGTGGA+AGG | 0.571341 | 6.1:+74694999 | MS.gene052419:CDS |
| TTTATCATTCAGCTCAAGCA+CGG | 0.574553 | 6.1:-74696368 | None:intergenic |
| TTTGTTATGAATAAGATGCA+TGG | 0.575041 | 6.1:+74696238 | MS.gene052419:CDS |
| CACTCTTCTTCAGATAGTGG+AGG | 0.576466 | 6.1:-74696559 | None:intergenic |
| GGATAGGTACTTCCTCCTCA+GGG | 0.584943 | 6.1:-74694972 | None:intergenic |
| GCCGGAACGCCATGAAAGAA+CGG | 0.596078 | 6.1:-74692065 | None:intergenic |
| TTCAGGTTGCTGGTAAAGAG+AGG | 0.599142 | 6.1:+74694624 | MS.gene052419:CDS |
| CAATCATGCTGATAGTGTAA+GGG | 0.615053 | 6.1:-74694724 | None:intergenic |
| TGAAGATGCTAAGTTGTACA+GGG | 0.615157 | 6.1:+74696480 | MS.gene052419:CDS |
| AGTCTTGTGCATTACAATGG+TGG | 0.616545 | 6.1:-74694681 | None:intergenic |
| GGTACGCGCTGCTGCCCCTG+AGG | 0.619533 | 6.1:+74694957 | MS.gene052419:CDS |
| GTTTACACGAATGTTTCGAA+AGG | 0.626382 | 6.1:+74692211 | MS.gene052419:CDS |
| CGAAATGGATATCCCTCATG+AGG | 0.633330 | 6.1:-74694751 | None:intergenic |
| TCAGGTTGCTGGTAAAGAGA+GGG | 0.634218 | 6.1:+74694625 | MS.gene052419:CDS |
| ACGGATTCAGAAGTTCTTTG+GGG | 0.636915 | 6.1:-74696349 | None:intergenic |
| TGACAATCCTTATACAGACC+AGG | 0.646899 | 6.1:-74696211 | None:intergenic |
| GGGAACACCACAAGAGTGAG+TGG | 0.646994 | 6.1:+74696500 | MS.gene052419:CDS |
| ACAATATGAAGCGTAAAACA+AGG | 0.648014 | 6.1:+74696530 | MS.gene052419:CDS |
| TGTGGATGGGGATACTCATG+TGG | 0.649096 | 6.1:+74696291 | MS.gene052419:CDS |
| ACTCTTCTTCAGATAGTGGA+GGG | 0.651530 | 6.1:-74696558 | None:intergenic |
| CATGATTGAACGCCTCATGA+GGG | 0.655277 | 6.1:+74694739 | MS.gene052419:CDS |
| GTCTGGACCTAAGCCTACTG+AGG | 0.658281 | 6.1:+74696411 | MS.gene052419:CDS |
| TCTGGACCTAAGCCTACTGA+GGG | 0.681737 | 6.1:+74696412 | MS.gene052419:CDS |
| TAAGTCTAAGGATTTGAATG+CGG | 0.687944 | 6.1:+74692243 | MS.gene052419:CDS |
| GTTGTTCGTCTCAAGAAACA+CGG | 0.697669 | 6.1:+74692010 | MS.gene052419:CDS |
| GATAGGTACTTCCTCCTCAG+GGG | 0.704780 | 6.1:-74694971 | None:intergenic |
| TGTGGATTACAATGATCACG+AGG | 0.775410 | 6.1:+74696309 | MS.gene052419:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATTATAATTAATAAC+AGG | - | chr6.1:74696069-74696088 | None:intergenic | 10.0% |
| !! | AAGAATTATAATTAATAACA+GGG | - | chr6.1:74696068-74696087 | None:intergenic | 10.0% |
| !! | ATAATAATCACAAAAAATTA+GGG | - | chr6.1:74692109-74692128 | None:intergenic | 10.0% |
| !! | AAAAAAAAGAAAAAAGCTTA+TGG | - | chr6.1:74694038-74694057 | None:intergenic | 15.0% |
| !! | AAAATAAAACTAGAAATACA+AGG | + | chr6.1:74695483-74695502 | MS.gene052419:intron | 15.0% |
| !! | AGAATATTTACAACTTATTT+GGG | + | chr6.1:74694246-74694265 | MS.gene052419:intron | 15.0% |
| !! | AGAATTATAATTAATAACAG+GGG | - | chr6.1:74696067-74696086 | None:intergenic | 15.0% |
| !! | CATAATAATCACAAAAAATT+AGG | - | chr6.1:74692110-74692129 | None:intergenic | 15.0% |
| !!! | AAGATATAAGTTGATTATAA+GGG | - | chr6.1:74694424-74694443 | None:intergenic | 15.0% |
| !!! | ATAAGCTTTTTTCTTTTTTT+TGG | + | chr6.1:74694037-74694056 | MS.gene052419:intron | 15.0% |
| !!! | TTCTTTTTTGATGAATAAAA+GGG | - | chr6.1:74693811-74693830 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTTGATGAATAAA+AGG | - | chr6.1:74693812-74693831 | None:intergenic | 15.0% |
| !!! | TTTTTTGGAATAAGTTATTT+AGG | + | chr6.1:74694052-74694071 | MS.gene052419:intron | 15.0% |
| !! | AATTGATCTGATTTCTAATT+GGG | + | chr6.1:74696167-74696186 | MS.gene052419:intron | 20.0% |
| !! | ACTAATTATTATGCATAAAC+TGG | - | chr6.1:74694526-74694545 | None:intergenic | 20.0% |
| !! | AGAATTAATTTATAACCACT+TGG | - | chr6.1:74695828-74695847 | None:intergenic | 20.0% |
| !! | CTAATTATTATGCATAAACT+GGG | - | chr6.1:74694525-74694544 | None:intergenic | 20.0% |
| !! | GAGAATATTTACAACTTATT+TGG | + | chr6.1:74694245-74694264 | MS.gene052419:intron | 20.0% |
| !! | TAATTGATCTGATTTCTAAT+TGG | + | chr6.1:74696166-74696185 | MS.gene052419:intron | 20.0% |
| !! | TATATGAGACAATCATTATA+TGG | - | chr6.1:74694837-74694856 | None:intergenic | 20.0% |
| !! | TTTACATAATTTATGCTTAG+AGG | + | chr6.1:74692933-74692952 | MS.gene052419:intron | 20.0% |
| !!! | AGGTTTTTAGTTTCTATTTT+GGG | + | chr6.1:74693777-74693796 | MS.gene052419:intron | 20.0% |
| !!! | AGTTAATTTGATGGATTAAT+CGG | + | chr6.1:74692140-74692159 | MS.gene052419:intron | 20.0% |
| !!! | ATTGACTTTTTAATAAGCTT+TGG | + | chr6.1:74692712-74692731 | MS.gene052419:intron | 20.0% |
| !!! | CAAGATATAAGTTGATTATA+AGG | - | chr6.1:74694425-74694444 | None:intergenic | 20.0% |
| !!! | GATTAATTGAGTTAATTTGA+TGG | + | chr6.1:74692131-74692150 | MS.gene052419:intron | 20.0% |
| !!! | TATTTGAAATGAAAGAATCA+TGG | - | chr6.1:74696031-74696050 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGATGAATAAAAG+GGG | - | chr6.1:74693810-74693829 | None:intergenic | 20.0% |
| ! | ACCAGATAAAATGTGATAAA+AGG | - | chr6.1:74695428-74695447 | None:intergenic | 25.0% |
| ! | ACTATCACAATAAACTAGAA+AGG | - | chr6.1:74693743-74693762 | None:intergenic | 25.0% |
| ! | ACTTTCATATAAGTTGTAAG+CGG | - | chr6.1:74694092-74694111 | None:intergenic | 25.0% |
| ! | ATAATCAACTTATATCTTGC+AGG | + | chr6.1:74694426-74694445 | MS.gene052419:intron | 25.0% |
| ! | ATGAGAGAAACAAAAACTAA+TGG | - | chr6.1:74693894-74693913 | None:intergenic | 25.0% |
| ! | CATAATTTATGCTTAGAGTT+TGG | + | chr6.1:74692937-74692956 | MS.gene052419:intron | 25.0% |
| ! | CTTTGATTCTGCTAAAATTT+CGG | + | chr6.1:74696140-74696159 | MS.gene052419:intron | 25.0% |
| ! | GTATTTGTATTTATCTGCTA+AGG | + | chr6.1:74693317-74693336 | MS.gene052419:intron | 25.0% |
| ! | TAACCCATAAAAAAGCTAAT+GGG | + | chr6.1:74695982-74696001 | MS.gene052419:intron | 25.0% |
| ! | TACAGAAATCATACCAAAAA+TGG | + | chr6.1:74693426-74693445 | MS.gene052419:intron | 25.0% |
| ! | TACAGGAATATGTTAATAGT+CGG | + | chr6.1:74695316-74695335 | MS.gene052419:intron | 25.0% |
| ! | TCATAAACCCTCAAATAATA+AGG | - | chr6.1:74693690-74693709 | None:intergenic | 25.0% |
| ! | TGTCATAAATGTTCAAAAGA+TGG | - | chr6.1:74695384-74695403 | None:intergenic | 25.0% |
| ! | TTTATCCAACCCATAAAAAA+GGG | + | chr6.1:74695358-74695377 | MS.gene052419:intron | 25.0% |
| !! | ATTGTTTTCATGTCCTTTTT+AGG | + | chr6.1:74695529-74695548 | MS.gene052419:intron | 25.0% |
| !! | CATTTTATCCAACACAAAAA+CGG | + | chr6.1:74695267-74695286 | MS.gene052419:intron | 25.0% |
| !! | TCCTTTTATCACATTTTATC+TGG | + | chr6.1:74695424-74695443 | MS.gene052419:intron | 25.0% |
| !! | TCTTTTGAACATTTATGACA+AGG | + | chr6.1:74695384-74695403 | MS.gene052419:intron | 25.0% |
| !! | TGAATCAAAATCTGATTTGA+AGG | + | chr6.1:74696603-74696622 | MS.gene052419:CDS | 25.0% |
| !! | TTTGTTATGAATAAGATGCA+TGG | + | chr6.1:74696238-74696257 | MS.gene052419:CDS | 25.0% |
| !! | TTTTATCCAACCCATAAAAA+AGG | + | chr6.1:74695357-74695376 | MS.gene052419:intron | 25.0% |
| !!! | ACTTGTTTGTTTTGAAAACT+CGG | + | chr6.1:74695631-74695650 | MS.gene052419:intron | 25.0% |
| !!! | GAGGTTTTTAGTTTCTATTT+TGG | + | chr6.1:74693776-74693795 | MS.gene052419:intron | 25.0% |
| !!! | TGCTTGTTTTTGTTTTTTGT+TGG | + | chr6.1:74695721-74695740 | MS.gene052419:intron | 25.0% |
| !!! | TGTTGCAGATTTTAAAGAAA+GGG | + | chr6.1:74694597-74694616 | MS.gene052419:intron | 25.0% |
| !!! | TTTTAATAAGCTTTGGTGTT+AGG | + | chr6.1:74692719-74692738 | MS.gene052419:intron | 25.0% |
| AATTGTATATGTCTGTGTTG+TGG | + | chr6.1:74692416-74692435 | MS.gene052419:intron | 30.0% | |
| ACAATATGAAGCGTAAAACA+AGG | + | chr6.1:74696530-74696549 | MS.gene052419:CDS | 30.0% | |
| AGCTCAACCTTATTATTTGA+GGG | + | chr6.1:74693680-74693699 | MS.gene052419:intron | 30.0% | |
| AGTGATTTAACTGTTAGTTG+AGG | + | chr6.1:74694543-74694562 | MS.gene052419:intron | 30.0% | |
| ATGGAACATTTATAGAGACA+TGG | - | chr6.1:74696012-74696031 | None:intergenic | 30.0% | |
| CATAATTTATGCTTAGAGGT+TGG | + | chr6.1:74692979-74692998 | MS.gene052419:intron | 30.0% | |
| CTAACCCATAAAAAAGCTAA+TGG | + | chr6.1:74695981-74696000 | MS.gene052419:intron | 30.0% | |
| GATTATGAAAGTCGTATTAC+AGG | + | chr6.1:74694876-74694895 | MS.gene052419:intron | 30.0% | |
| GCTTTATCCAATAGTTGAAA+AGG | - | chr6.1:74693508-74693527 | None:intergenic | 30.0% | |
| GTTGGATAAAATGTGGTAAA+AGG | - | chr6.1:74695348-74695367 | None:intergenic | 30.0% | |
| TAAAAACCTCTTAGAAAGAG+AGG | - | chr6.1:74693766-74693785 | None:intergenic | 30.0% | |
| TAACTCATTTCCTAAGCTTA+TGG | - | chr6.1:74693404-74693423 | None:intergenic | 30.0% | |
| TAAGCACTCATGCTTAATTT+GGG | + | chr6.1:74693278-74693297 | MS.gene052419:intron | 30.0% | |
| TAAGTCTAAGGATTTGAATG+CGG | + | chr6.1:74692243-74692262 | MS.gene052419:CDS | 30.0% | |
| TAGCTCAACCTTATTATTTG+AGG | + | chr6.1:74693679-74693698 | MS.gene052419:intron | 30.0% | |
| TATATCTGCATTTGCGTATA+TGG | + | chr6.1:74696106-74696125 | MS.gene052419:intron | 30.0% | |
| TGACATTGAATTGATCAAGT+AGG | - | chr6.1:74693010-74693029 | None:intergenic | 30.0% | |
| TGATATCATAAACCTACCTA+TGG | - | chr6.1:74693593-74693612 | None:intergenic | 30.0% | |
| TTAAGCACTCATGCTTAATT+TGG | + | chr6.1:74693277-74693296 | MS.gene052419:intron | 30.0% | |
| TTGCTACAAAACAACTAACA+TGG | - | chr6.1:74692335-74692354 | None:intergenic | 30.0% | |
| TTTATGCTTAGAGTTTGGTT+AGG | + | chr6.1:74692942-74692961 | MS.gene052419:intron | 30.0% | |
| ! | AAAAGTCTTGTGCATTACAA+TGG | - | chr6.1:74694687-74694706 | None:intergenic | 30.0% |
| ! | ATAAGCACTGTCATAATGTT+TGG | + | chr6.1:74693981-74694000 | MS.gene052419:intron | 30.0% |
| ! | ATTTTATTCTCTGTAACCCT+GGG | + | chr6.1:74695103-74695122 | MS.gene052419:intron | 30.0% |
| ! | TAAGCACTGTCATAATGTTT+GGG | + | chr6.1:74693982-74694001 | MS.gene052419:intron | 30.0% |
| ! | TGTCCCTTCTTTAGAAATAA+CGG | - | chr6.1:74695028-74695047 | None:intergenic | 30.0% |
| ! | TTGATTATAAGGGTATGCTT+GGG | - | chr6.1:74694414-74694433 | None:intergenic | 30.0% |
| !! | ATGGAATTCTTTAGAATGAC+AGG | - | chr6.1:74694818-74694837 | None:intergenic | 30.0% |
| !! | CAACCGTTATTTCTAAAGAA+GGG | + | chr6.1:74695022-74695041 | MS.gene052419:CDS | 30.0% |
| !! | CTGTTGCAGATTTTAAAGAA+AGG | + | chr6.1:74694596-74694615 | MS.gene052419:intron | 30.0% |
| !! | GTTGCAGATTTTAAAGAAAG+GGG | + | chr6.1:74694598-74694617 | MS.gene052419:intron | 30.0% |
| !! | TATCTACAGTTGTTTTCAGT+AGG | + | chr6.1:74694271-74694290 | MS.gene052419:intron | 30.0% |
| !! | TTTATGGGTTGGATAAAATG+TGG | - | chr6.1:74695355-74695374 | None:intergenic | 30.0% |
| !!! | AAAAGATGGCCCTTTTTTAT+GGG | - | chr6.1:74695370-74695389 | None:intergenic | 30.0% |
| !!! | ACTTCCCATTAGCTTTTTTA+TGG | - | chr6.1:74695989-74696008 | None:intergenic | 30.0% |
| !!! | CTTCCCATTAGCTTTTTTAT+GGG | - | chr6.1:74695988-74696007 | None:intergenic | 30.0% |
| !!! | GTTTTTGTTTTTTGTTGGCA+TGG | + | chr6.1:74695726-74695745 | MS.gene052419:intron | 30.0% |
| !!! | TGTTTTGAAAACTCGGTATT+CGG | + | chr6.1:74695638-74695657 | MS.gene052419:intron | 30.0% |
| !!! | TTTTGATAAGCTTTGGTGTT+CGG | + | chr6.1:74693137-74693156 | MS.gene052419:intron | 30.0% |
| AAGTTTGAGAAGTTGTTCGT+TGG | + | chr6.1:74695458-74695477 | MS.gene052419:intron | 35.0% | |
| AATAACCAACTTCTGATCGA+AGG | - | chr6.1:74692915-74692934 | None:intergenic | 35.0% | |
| AATGGCTGAGTTATCAGTTA+TGG | + | chr6.1:74693444-74693463 | MS.gene052419:intron | 35.0% | |
| AATTGTAAAGTTCTCCCATG+CGG | + | chr6.1:74693635-74693654 | MS.gene052419:intron | 35.0% | |
| ACAAACCTCTAAGCAAATAC+TGG | - | chr6.1:74692290-74692309 | None:intergenic | 35.0% | |
| ATAAACTAGAAAGGCTAGGT+AGG | - | chr6.1:74693734-74693753 | None:intergenic | 35.0% | |
| ATGGCTGAGTTATCAGTTAT+GGG | + | chr6.1:74693445-74693464 | MS.gene052419:intron | 35.0% | |
| ATTCAGTTAGCAATATCACG+TGG | + | chr6.1:74693482-74693501 | MS.gene052419:intron | 35.0% | |
| CAAAAGCAAACAATTTCGTC+TGG | + | chr6.1:74696394-74696413 | MS.gene052419:CDS | 35.0% | |
| CACAATAAACTAGAAAGGCT+AGG | - | chr6.1:74693738-74693757 | None:intergenic | 35.0% | |
| CAGGGTTACAGAGAATAAAA+TGG | - | chr6.1:74695104-74695123 | None:intergenic | 35.0% | |
| CATGGGAGAACTTTACAATT+GGG | - | chr6.1:74693635-74693654 | None:intergenic | 35.0% | |
| CTTCTATAATCAAGACAACG+TGG | - | chr6.1:74694350-74694369 | None:intergenic | 35.0% | |
| GAACACCAAAGCTTATCAAA+AGG | - | chr6.1:74693138-74693157 | None:intergenic | 35.0% | |
| GATATACCAGACACAACTTA+TGG | - | chr6.1:74696092-74696111 | None:intergenic | 35.0% | |
| GCTAAGGTATGCATTTATCA+AGG | + | chr6.1:74693333-74693352 | MS.gene052419:intron | 35.0% | |
| GTTTACACGAATGTTTCGAA+AGG | + | chr6.1:74692211-74692230 | MS.gene052419:CDS | 35.0% | |
| TAAACTAGAAAGGCTAGGTA+GGG | - | chr6.1:74693733-74693752 | None:intergenic | 35.0% | |
| TATAAAACGGTGTCCATTGA+GGG | + | chr6.1:74694936-74694955 | MS.gene052419:CDS | 35.0% | |
| TATCACATGTCCATAAGCTT+AGG | + | chr6.1:74693391-74693410 | MS.gene052419:intron | 35.0% | |
| TCATTCCAGTATTTGCTTAG+AGG | + | chr6.1:74692282-74692301 | MS.gene052419:CDS | 35.0% | |
| TGAACATCTGTGATAGTTAC+AGG | + | chr6.1:74695299-74695318 | MS.gene052419:intron | 35.0% | |
| TGAAGATGCTAAGTTGTACA+GGG | + | chr6.1:74696480-74696499 | MS.gene052419:CDS | 35.0% | |
| TTCTTTCCATAAGTTGTGTC+TGG | + | chr6.1:74696083-74696102 | MS.gene052419:intron | 35.0% | |
| TTGAAGATGCTAAGTTGTAC+AGG | + | chr6.1:74696479-74696498 | MS.gene052419:CDS | 35.0% | |
| TTTAAAGAAAGGGGAACTTC+AGG | + | chr6.1:74694607-74694626 | MS.gene052419:CDS | 35.0% | |
| TTTATCATTCAGCTCAAGCA+CGG | - | chr6.1:74696371-74696390 | None:intergenic | 35.0% | |
| TTTCGAAATTACTTACACGC+CGG | - | chr6.1:74692086-74692105 | None:intergenic | 35.0% | |
| TTTGGGTAGAATTTGGTCAT+GGG | + | chr6.1:74695558-74695577 | MS.gene052419:intron | 35.0% | |
| ! | AATACAAGGCGCATTTTATC+TGG | + | chr6.1:74695497-74695516 | MS.gene052419:intron | 35.0% |
| ! | ACAGACCTTTTGATAAGCTT+TGG | + | chr6.1:74693130-74693149 | MS.gene052419:intron | 35.0% |
| ! | CAATCATGCTGATAGTGTAA+GGG | - | chr6.1:74694727-74694746 | None:intergenic | 35.0% |
| ! | CATTTTATTCTCTGTAACCC+TGG | + | chr6.1:74695102-74695121 | MS.gene052419:intron | 35.0% |
| ! | GCATTAAGAGTTCTGATTGA+AGG | - | chr6.1:74693100-74693119 | None:intergenic | 35.0% |
| ! | GTTGATTATAAGGGTATGCT+TGG | - | chr6.1:74694415-74694434 | None:intergenic | 35.0% |
| ! | TCAATCATGCTGATAGTGTA+AGG | - | chr6.1:74694728-74694747 | None:intergenic | 35.0% |
| ! | TCAATGGACACCGTTTTATA+GGG | - | chr6.1:74694936-74694955 | None:intergenic | 35.0% |
| ! | TGTGTTGCTCAGTTATTTCA+TGG | + | chr6.1:74695076-74695095 | MS.gene052419:intron | 35.0% |
| !! | AACATGATCCGTTTTTGTGT+TGG | - | chr6.1:74695278-74695297 | None:intergenic | 35.0% |
| !! | ACTGATAACTCAGCCATTTT+TGG | - | chr6.1:74693442-74693461 | None:intergenic | 35.0% |
| !! | AGAAGCACTACCCTATAAAA+CGG | + | chr6.1:74694923-74694942 | MS.gene052419:CDS | 35.0% |
| !! | GCAACCGTTATTTCTAAAGA+AGG | + | chr6.1:74695021-74695040 | MS.gene052419:CDS | 35.0% |
| !! | TCCTTTTTAGGCAAGCTTTT+GGG | + | chr6.1:74695541-74695560 | MS.gene052419:intron | 35.0% |
| !! | TCGGTGTTTTTGTAGTGAAA+AGG | + | chr6.1:74692159-74692178 | MS.gene052419:intron | 35.0% |
| !! | TTTTGGGTAGAATTTGGTCA+TGG | + | chr6.1:74695557-74695576 | MS.gene052419:intron | 35.0% |
| !!! | CAAAAGATGGCCCTTTTTTA+TGG | - | chr6.1:74695371-74695390 | None:intergenic | 35.0% |
| !!! | CTGGTTTGCTTGTTTTAGTT+GGG | + | chr6.1:74695774-74695793 | MS.gene052419:intron | 35.0% |
| !!! | TCTGGTTTGCTTGTTTTAGT+TGG | + | chr6.1:74695773-74695792 | MS.gene052419:intron | 35.0% |
| !!! | TTGTTTTTTGTTGGCATGGT+CGG | + | chr6.1:74695730-74695749 | MS.gene052419:intron | 35.0% |
| AACATATCAATGCCCCGTTT+AGG | - | chr6.1:74692559-74692578 | None:intergenic | 40.0% | |
| AATGCTGTCTAGTCAGTTCA+GGG | + | chr6.1:74694652-74694671 | MS.gene052419:CDS | 40.0% | |
| ACACTCACTTAGGGTACATA+TGG | - | chr6.1:74694217-74694236 | None:intergenic | 40.0% | |
| ACCACTTGGTTCCAAATACA+AGG | - | chr6.1:74695814-74695833 | None:intergenic | 40.0% | |
| ACCCAAAAGCTTGCCTAAAA+AGG | - | chr6.1:74695545-74695564 | None:intergenic | 40.0% | |
| ACGGATTCAGAAGTTCTTTG+GGG | - | chr6.1:74696352-74696371 | None:intergenic | 40.0% | |
| AGGTGTTCTTGCTAAGTCTA+AGG | + | chr6.1:74692231-74692250 | MS.gene052419:CDS | 40.0% | |
| ATAGCTATGAAACACTGTCG+TGG | + | chr6.1:74693045-74693064 | MS.gene052419:intron | 40.0% | |
| ATTTGCAGCTTGAGTGCTTA+AGG | - | chr6.1:74693935-74693954 | None:intergenic | 40.0% | |
| CACGGATTCAGAAGTTCTTT+GGG | - | chr6.1:74696353-74696372 | None:intergenic | 40.0% | |
| CTATAAAACGGTGTCCATTG+AGG | + | chr6.1:74694935-74694954 | MS.gene052419:CDS | 40.0% | |
| CTCACTCTCTTTATGTGGAT+GGG | + | chr6.1:74696278-74696297 | MS.gene052419:CDS | 40.0% | |
| CTTCCAAACACACTCACTTA+GGG | - | chr6.1:74694226-74694245 | None:intergenic | 40.0% | |
| GATAGTCCTCTCTTTCTAAG+AGG | + | chr6.1:74693757-74693776 | MS.gene052419:intron | 40.0% | |
| GCATGGGAGAACTTTACAAT+TGG | - | chr6.1:74693636-74693655 | None:intergenic | 40.0% | |
| GCTAGGTTACACCTTGTATT+TGG | + | chr6.1:74695800-74695819 | MS.gene052419:intron | 40.0% | |
| GTAGCAATGACACACTGATA+TGG | + | chr6.1:74692348-74692367 | MS.gene052419:intron | 40.0% | |
| GTTGTTCGTCTCAAGAAACA+CGG | + | chr6.1:74692010-74692029 | MS.gene052419:CDS | 40.0% | |
| TAAGCACTCAAGCTGCAAAT+GGG | + | chr6.1:74693935-74693954 | MS.gene052419:intron | 40.0% | |
| TACAATTGGGACTTAAGTCG+CGG | - | chr6.1:74693622-74693641 | None:intergenic | 40.0% | |
| TACACATCAGTTCCATAGGT+AGG | + | chr6.1:74693578-74693597 | MS.gene052419:intron | 40.0% | |
| TATGGAACTGATGTGTAGCA+GGG | - | chr6.1:74693575-74693594 | None:intergenic | 40.0% | |
| TCACTCTCTTTATGTGGATG+GGG | + | chr6.1:74696279-74696298 | MS.gene052419:CDS | 40.0% | |
| TCTTCCAAACACACTCACTT+AGG | - | chr6.1:74694227-74694246 | None:intergenic | 40.0% | |
| TCTTGCTCACTCTCTTTATG+TGG | + | chr6.1:74696273-74696292 | MS.gene052419:CDS | 40.0% | |
| TGACAATCCTTATACAGACC+AGG | - | chr6.1:74696214-74696233 | None:intergenic | 40.0% | |
| TGTTTGGATCAACAGCGAAA+TGG | - | chr6.1:74694769-74694788 | None:intergenic | 40.0% | |
| TTAAGCACTCAAGCTGCAAA+TGG | + | chr6.1:74693934-74693953 | MS.gene052419:intron | 40.0% | |
| TTGTTAGCTGGAAAACACTC+TGG | + | chr6.1:74695755-74695774 | MS.gene052419:intron | 40.0% | |
| ! | ACCTTGTATTTGGAACCAAG+TGG | + | chr6.1:74695810-74695829 | MS.gene052419:intron | 40.0% |
| ! | AGTCTTGTGCATTACAATGG+TGG | - | chr6.1:74694684-74694703 | None:intergenic | 40.0% |
| ! | CACGCATTTTCTGTAAGTTG+TGG | + | chr6.1:74695923-74695942 | MS.gene052419:intron | 40.0% |
| ! | CACTCATGCTTAATTTGGGT+TGG | + | chr6.1:74693282-74693301 | MS.gene052419:intron | 40.0% |
| ! | CAGGGGTTAATCTTTTGTTC+GGG | + | chr6.1:74695581-74695600 | MS.gene052419:intron | 40.0% |
| ! | CAGTGTCCTAAAAGTGTAGT+TGG | - | chr6.1:74693071-74693090 | None:intergenic | 40.0% |
| ! | CAGTTATGGGCTATACATCA+AGG | + | chr6.1:74693458-74693477 | MS.gene052419:intron | 40.0% |
| ! | CTCAATGGACACCGTTTTAT+AGG | - | chr6.1:74694937-74694956 | None:intergenic | 40.0% |
| ! | CTCAGCTTTTCCAAAAGGAT+AGG | - | chr6.1:74694991-74695010 | None:intergenic | 40.0% |
| ! | CTGATTTCTAATTGGGTTGC+AGG | + | chr6.1:74696174-74696193 | MS.gene052419:intron | 40.0% |
| ! | GCAGGGGTTAATCTTTTGTT+CGG | + | chr6.1:74695580-74695599 | MS.gene052419:intron | 40.0% |
| ! | TGGGTTGCAGGTTTTTGAAT+TGG | + | chr6.1:74696186-74696205 | MS.gene052419:intron | 40.0% |
| ! | TGTGGATTACAATGATCACG+AGG | + | chr6.1:74696309-74696328 | MS.gene052419:CDS | 40.0% |
| !! | ACTCTTCTTCAGATAGTGGA+GGG | - | chr6.1:74696561-74696580 | None:intergenic | 40.0% |
| !! | AGAGTGTTTTCCAGCTAACA+AGG | - | chr6.1:74695756-74695775 | None:intergenic | 40.0% |
| !! | CGCATTTTATCTGGTTTCTC+AGG | + | chr6.1:74695506-74695525 | MS.gene052419:intron | 40.0% |
| !! | CTTCTAGAACAGAAAACCCA+GGG | - | chr6.1:74695122-74695141 | None:intergenic | 40.0% |
| !! | GCAAGCTTTTGGGTAGAATT+TGG | + | chr6.1:74695551-74695570 | MS.gene052419:intron | 40.0% |
| !! | GGGCATTGATATGTTGATAC+TGG | + | chr6.1:74692564-74692583 | MS.gene052419:intron | 40.0% |
| !! | GTCCTTTTTAGGCAAGCTTT+TGG | + | chr6.1:74695540-74695559 | MS.gene052419:intron | 40.0% |
| !! | GTTAATCGCTTTTGACCTAC+TGG | - | chr6.1:74691980-74691999 | None:intergenic | 40.0% |
| !! | TAGGTAGGGTAATGGAATCA+GGG | - | chr6.1:74693719-74693738 | None:intergenic | 40.0% |
| !! | TGAAGTGTTGCAGTCACATA+CGG | + | chr6.1:74692189-74692208 | MS.gene052419:CDS | 40.0% |
| !!! | CAACTACACTTTTAGGACAC+TGG | + | chr6.1:74693069-74693088 | MS.gene052419:intron | 40.0% |
| !!! | GTGTTGCACTTGTTTTGCTT+TGG | - | chr6.1:74696445-74696464 | None:intergenic | 40.0% |
| !!! | TTGTTTTAGTTGGGTCTGCT+AGG | + | chr6.1:74695783-74695802 | MS.gene052419:intron | 40.0% |
| AAAACTCGGTATTCGGTCCA+AGG | + | chr6.1:74695645-74695664 | MS.gene052419:intron | 45.0% | |
| AAGGATTTGAATGCGGCGTT+TGG | + | chr6.1:74692250-74692269 | MS.gene052419:CDS | 45.0% | |
| ACAAGATACCTGCTTCTTGG+AGG | - | chr6.1:74694795-74694814 | None:intergenic | 45.0% | |
| ACACACCTTCGATCAGAAGT+TGG | + | chr6.1:74692907-74692926 | MS.gene052419:intron | 45.0% | |
| ACAGACACGGAAACCTAAAC+GGG | + | chr6.1:74692543-74692562 | MS.gene052419:intron | 45.0% | |
| ACAGCGCGCAAATGAGTATT+TGG | - | chr6.1:74695879-74695898 | None:intergenic | 45.0% | |
| ACCCTAACACCGTTCTTTCA+TGG | + | chr6.1:74692056-74692075 | MS.gene052419:CDS | 45.0% | |
| AGAAAGGCTAGGTAGGGTAA+TGG | - | chr6.1:74693727-74693746 | None:intergenic | 45.0% | |
| AGGACAAGATACCTGCTTCT+TGG | - | chr6.1:74694798-74694817 | None:intergenic | 45.0% | |
| ATGCCTTCAATCAGACGAGT+CGG | + | chr6.1:74692662-74692681 | MS.gene052419:intron | 45.0% | |
| ATTGGAGCCTGGTCTGTATA+AGG | + | chr6.1:74696204-74696223 | MS.gene052419:CDS | 45.0% | |
| CAATGCTGTCTAGTCAGTTC+AGG | + | chr6.1:74694651-74694670 | MS.gene052419:CDS | 45.0% | |
| CACAGACACGGAAACCTAAA+CGG | + | chr6.1:74692542-74692561 | MS.gene052419:intron | 45.0% | |
| CATGATTGAACGCCTCATGA+GGG | + | chr6.1:74694739-74694758 | MS.gene052419:CDS | 45.0% | |
| CGAAATGGATATCCCTCATG+AGG | - | chr6.1:74694754-74694773 | None:intergenic | 45.0% | |
| CTATGGAACTGATGTGTAGC+AGG | - | chr6.1:74693576-74693595 | None:intergenic | 45.0% | |
| CTGCTACACATCAGTTCCAT+AGG | + | chr6.1:74693574-74693593 | MS.gene052419:intron | 45.0% | |
| GAAAGTCGTATTACAGGCTC+TGG | + | chr6.1:74694882-74694901 | MS.gene052419:intron | 45.0% | |
| GCACGGATTCAGAAGTTCTT+TGG | - | chr6.1:74696354-74696373 | None:intergenic | 45.0% | |
| GCGATCAACCTTATCCAACA+AGG | + | chr6.1:74693546-74693565 | MS.gene052419:intron | 45.0% | |
| GCTCACTCTCTTTATGTGGA+TGG | + | chr6.1:74696277-74696296 | MS.gene052419:CDS | 45.0% | |
| GTACCCTAAGTGAGTGTGTT+TGG | + | chr6.1:74694220-74694239 | MS.gene052419:intron | 45.0% | |
| GTAGAATTTGGTCATGGGCA+GGG | + | chr6.1:74695563-74695582 | MS.gene052419:intron | 45.0% | |
| GTGCACTCTTCTTCAGATAG+TGG | - | chr6.1:74696565-74696584 | None:intergenic | 45.0% | |
| TAGAATTTGGTCATGGGCAG+GGG | + | chr6.1:74695564-74695583 | MS.gene052419:intron | 45.0% | |
| TATGTTGGACACTGACGTGT+AGG | + | chr6.1:74692877-74692896 | MS.gene052419:intron | 45.0% | |
| TGTCAGTGTCGTGTCTATGT+TGG | + | chr6.1:74692862-74692881 | MS.gene052419:intron | 45.0% | |
| TGTCGCACACTAACATGTGT+AGG | + | chr6.1:74692630-74692649 | MS.gene052419:intron | 45.0% | |
| TTTGGTTGTTGTCCCTCAGT+AGG | - | chr6.1:74696427-74696446 | None:intergenic | 45.0% | |
| ! | AAGCCTTATGCCACTAAGTG+GGG | + | chr6.1:74695184-74695203 | MS.gene052419:intron | 45.0% |
| ! | ACGCTTTCGATCAGAAGTGT+CGG | + | chr6.1:74692466-74692485 | MS.gene052419:intron | 45.0% |
| ! | ACTCGCTCAGCTTTTCCAAA+AGG | - | chr6.1:74694996-74695015 | None:intergenic | 45.0% |
| ! | AGAAGAGTGCACAGCAGATA+TGG | + | chr6.1:74696573-74696592 | MS.gene052419:CDS | 45.0% |
| ! | ATAAGGGTATGCTTGGGACA+TGG | - | chr6.1:74694408-74694427 | None:intergenic | 45.0% |
| ! | CAAGCCTTATGCCACTAAGT+GGG | + | chr6.1:74695183-74695202 | MS.gene052419:intron | 45.0% |
| ! | CACGTGGCCTTTTCAACTAT+TGG | + | chr6.1:74693498-74693517 | MS.gene052419:intron | 45.0% |
| ! | CACTCTTCTTCAGATAGTGG+AGG | - | chr6.1:74696562-74696581 | None:intergenic | 45.0% |
| ! | CAGGTTTTTGAATTGGAGCC+TGG | + | chr6.1:74696193-74696212 | MS.gene052419:intron | 45.0% |
| ! | CGGGTGCAGTAGTTTTTCTT+TGG | + | chr6.1:74695600-74695619 | MS.gene052419:intron | 45.0% |
| ! | CGTTCTTTGGTTCAACCAGT+AGG | + | chr6.1:74691962-74691981 | MS.gene052419:CDS | 45.0% |
| ! | GCCATGAAAGAACGGTGTTA+GGG | - | chr6.1:74692060-74692079 | None:intergenic | 45.0% |
| ! | TAAGGGTATGCTTGGGACAT+GGG | - | chr6.1:74694407-74694426 | None:intergenic | 45.0% |
| ! | TCAGGTTGCTGGTAAAGAGA+GGG | + | chr6.1:74694625-74694644 | MS.gene052419:CDS | 45.0% |
| ! | TCGTGGCCAACTACACTTTT+AGG | + | chr6.1:74693062-74693081 | MS.gene052419:intron | 45.0% |
| ! | TGTTGGATAAGGTTGATCGC+AGG | - | chr6.1:74693546-74693565 | None:intergenic | 45.0% |
| !! | AGGTAGGGTAATGGAATCAG+GGG | - | chr6.1:74693718-74693737 | None:intergenic | 45.0% |
| !! | ATGAAGCACTGACACAGACA+CGG | + | chr6.1:74692530-74692549 | MS.gene052419:intron | 45.0% |
| !! | ATTGGACCCCTTGGATTAGT+CGG | - | chr6.1:74695672-74695691 | None:intergenic | 45.0% |
| !! | CTAGGTAGGGTAATGGAATC+AGG | - | chr6.1:74693720-74693739 | None:intergenic | 45.0% |
| !! | GCTTCTAGAACAGAAAACCC+AGG | - | chr6.1:74695123-74695142 | None:intergenic | 45.0% |
| !! | TCAGAAGTTCTTTGGGGCAA+TGG | - | chr6.1:74696346-74696365 | None:intergenic | 45.0% |
| !! | TTCAGGTTGCTGGTAAAGAG+AGG | + | chr6.1:74694624-74694643 | MS.gene052419:CDS | 45.0% |
| !! | TTTTGGAAAAGCTGAGCGAG+TGG | + | chr6.1:74694995-74695014 | MS.gene052419:CDS | 45.0% |
| !!! | GATGGCCCTTTTTTATGGGT+TGG | - | chr6.1:74695366-74695385 | None:intergenic | 45.0% |
| !!! | GGAGGAAGTACCTATCCTTT+TGG | + | chr6.1:74694978-74694997 | MS.gene052419:CDS | 45.0% |
| AAACAGCACCTCCAAGAAGC+AGG | + | chr6.1:74694784-74694803 | MS.gene052419:CDS | 50.0% | |
| AAGTGGGGTTGCCACTAAGT+GGG | + | chr6.1:74695199-74695218 | MS.gene052419:intron | 50.0% | |
| ACCGTTCTTTCATGGCGTTC+CGG | + | chr6.1:74692064-74692083 | MS.gene052419:CDS | 50.0% | |
| AGGATAGGTACTTCCTCCTC+AGG | - | chr6.1:74694976-74694995 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTAG+TGG | - | chr6.1:74695213-74695232 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGCATA+AGG | - | chr6.1:74695190-74695209 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATCCAAG+GGG | + | chr6.1:74695663-74695682 | MS.gene052419:intron | 50.0% | |
| CACTCAAGCTGCAAATGGGT+TGG | + | chr6.1:74693939-74693958 | MS.gene052419:intron | 50.0% | |
| CAGACACGGAAACCTAAACG+GGG | + | chr6.1:74692544-74692563 | MS.gene052419:intron | 50.0% | |
| CCAAGGACCGACTAATCCAA+GGG | + | chr6.1:74695662-74695681 | MS.gene052419:intron | 50.0% | |
| CCACTTAGTGGCATAAGGCT+TGG | - | chr6.1:74695185-74695204 | None:intergenic | 50.0% | |
| CGCCATGAAAGAACGGTGTT+AGG | - | chr6.1:74692061-74692080 | None:intergenic | 50.0% | |
| GACACTTCTGATCGAAAGCG+TGG | - | chr6.1:74692467-74692486 | None:intergenic | 50.0% | |
| GATAGGTACTTCCTCCTCAG+GGG | - | chr6.1:74694974-74694993 | None:intergenic | 50.0% | |
| GCATGATTGAACGCCTCATG+AGG | + | chr6.1:74694738-74694757 | MS.gene052419:CDS | 50.0% | |
| GGATAGGTACTTCCTCCTCA+GGG | - | chr6.1:74694975-74694994 | None:intergenic | 50.0% | |
| GGTAGAATTTGGTCATGGGC+AGG | + | chr6.1:74695562-74695581 | MS.gene052419:intron | 50.0% | |
| TAAGTGGGGTTGCCACTAAG+TGG | + | chr6.1:74695198-74695217 | MS.gene052419:intron | 50.0% | |
| TCCAAGGACCGACTAATCCA+AGG | + | chr6.1:74695661-74695680 | MS.gene052419:intron | 50.0% | |
| TCGCAGGCAGCTAATGAACT+AGG | - | chr6.1:74693530-74693549 | None:intergenic | 50.0% | |
| TCTGGACCTAAGCCTACTGA+GGG | + | chr6.1:74696412-74696431 | MS.gene052419:CDS | 50.0% | |
| TGTGGATGGGGATACTCATG+TGG | + | chr6.1:74696291-74696310 | MS.gene052419:CDS | 50.0% | |
| TGTTGTCCCTCAGTAGGCTT+AGG | - | chr6.1:74696421-74696440 | None:intergenic | 50.0% | |
| TTAGTGGCAACCCCACTTAG+TGG | - | chr6.1:74695197-74695216 | None:intergenic | 50.0% | |
| ! | CAGGGCATCCTTGTTGGATA+AGG | - | chr6.1:74693557-74693576 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATGCCACTAAG+TGG | + | chr6.1:74695182-74695201 | MS.gene052419:intron | 50.0% |
| ! | CGTCTGATTGAAGGCATGTC+TGG | - | chr6.1:74692659-74692678 | None:intergenic | 50.0% |
| ! | CTTCTGATCGAAGGTGTGTC+CGG | - | chr6.1:74692906-74692925 | None:intergenic | 50.0% |
| ! | TTCTGATCGAAAGCGTGGTC+AGG | - | chr6.1:74692462-74692481 | None:intergenic | 50.0% |
| !! | AAAGGGGAACTTCAGGTTGC+TGG | + | chr6.1:74694614-74694633 | MS.gene052419:CDS | 50.0% |
| !! | ACAGGCTCTGGAGTTGATTC+AGG | + | chr6.1:74694894-74694913 | MS.gene052419:intron | 50.0% |
| !! | AGTGTAAGGGCGCTTAGTCT+CGG | - | chr6.1:74694714-74694733 | None:intergenic | 50.0% |
| !! | TGCTTCTTGGAGGTGCTGTT+TGG | - | chr6.1:74694785-74694804 | None:intergenic | 50.0% |
| AGTGGGGTTGCCACTAAGTG+GGG | + | chr6.1:74695200-74695219 | MS.gene052419:intron | 55.0% | |
| CTTCGCCAATGCATCCGCAT+GGG | - | chr6.1:74693652-74693671 | None:intergenic | 55.0% | |
| GACACTGACGTGTAGGACAC+CGG | + | chr6.1:74692884-74692903 | MS.gene052419:intron | 55.0% | |
| GCCGGAACGCCATGAAAGAA+CGG | - | chr6.1:74692068-74692087 | None:intergenic | 55.0% | |
| GGAAAAGCTGAGCGAGTGGA+AGG | + | chr6.1:74694999-74695018 | MS.gene052419:CDS | 55.0% | |
| GGGAACACCACAAGAGTGAG+TGG | + | chr6.1:74696500-74696519 | MS.gene052419:CDS | 55.0% | |
| GTCTGGACCTAAGCCTACTG+AGG | + | chr6.1:74696411-74696430 | MS.gene052419:CDS | 55.0% | |
| GTTAGTGTGCGACACACACG+TGG | - | chr6.1:74692624-74692643 | None:intergenic | 55.0% | |
| GTTCTCCCATGCGGATGCAT+TGG | + | chr6.1:74693644-74693663 | MS.gene052419:intron | 55.0% | |
| TCTTCGCCAATGCATCCGCA+TGG | - | chr6.1:74693653-74693672 | None:intergenic | 55.0% | |
| ! | GCGGATGCATTGGCGAAGAT+TGG | + | chr6.1:74693654-74693673 | MS.gene052419:intron | 55.0% |
| ! | GCTTGTGCCACTCACTCTTG+TGG | - | chr6.1:74696510-74696529 | None:intergenic | 55.0% |
| ! | GTGTAGCAGGGCATCCTTGT+TGG | - | chr6.1:74693563-74693582 | None:intergenic | 55.0% |
| !! | CCCTTGGATTAGTCGGTCCT+TGG | - | chr6.1:74695665-74695684 | None:intergenic | 55.0% |
| !! | GCACCGACTCGTCTGATTGA+AGG | - | chr6.1:74692668-74692687 | None:intergenic | 55.0% |
| !! | GTGTAAGGGCGCTTAGTCTC+GGG | - | chr6.1:74694713-74694732 | None:intergenic | 55.0% |
| !! | GTTCTTTGGGGCAATGGTGC+AGG | - | chr6.1:74696340-74696359 | None:intergenic | 55.0% |
| !! | TCAGACGAGTCGGTGCTGTA+AGG | + | chr6.1:74692672-74692691 | MS.gene052419:intron | 55.0% |
| AATCCCACCACCCACATGCG+GGG | + | chr6.1:74695689-74695708 | MS.gene052419:intron | 60.0% | |
| CAATCCCACCACCCACATGC+GGG | + | chr6.1:74695688-74695707 | MS.gene052419:intron | 60.0% | |
| CCAATCCCACCACCCACATG+CGG | + | chr6.1:74695687-74695706 | MS.gene052419:intron | 60.0% | |
| GGGTTGCCACTAAGTGGGGT+TGG | + | chr6.1:74695204-74695223 | MS.gene052419:intron | 60.0% | |
| !! | GCATGGTCGGCCTTGTTAGC+TGG | + | chr6.1:74695743-74695762 | MS.gene052419:intron | 60.0% |
| ATCCCACCACCCACATGCGG+GGG | + | chr6.1:74695690-74695709 | MS.gene052419:intron | 65.0% | |
| GCAGCAGCGCGTACCCTCAA+TGG | - | chr6.1:74694952-74694971 | None:intergenic | 65.0% | |
| !! | CCGCATGTGGGTGGTGGGAT+TGG | - | chr6.1:74695690-74695709 | None:intergenic | 65.0% |
| !! | GGTGGTGGGATTGGACCCCT+TGG | - | chr6.1:74695681-74695700 | None:intergenic | 65.0% |
| AACCCCCACCCCCCGCATGT+GGG | - | chr6.1:74695702-74695721 | None:intergenic | 70.0% | |
| ACCACCCACATGCGGGGGGT+GGG | + | chr6.1:74695695-74695714 | MS.gene052419:intron | 70.0% | |
| ACCCCCCGCATGTGGGTGGT+GGG | - | chr6.1:74695695-74695714 | None:intergenic | 70.0% | |
| TCCCACCACCCACATGCGGG+GGG | + | chr6.1:74695691-74695710 | MS.gene052419:intron | 70.0% | |
| ACGCGCTGCTGCCCCTGAGG+AGG | + | chr6.1:74694960-74694979 | MS.gene052419:CDS | 75.0% | |
| CAACCCCCACCCCCCGCATG+TGG | - | chr6.1:74695703-74695722 | None:intergenic | 75.0% | |
| CACCACCCACATGCGGGGGG+TGG | + | chr6.1:74695694-74695713 | MS.gene052419:intron | 75.0% | |
| CACCCACATGCGGGGGGTGG+GGG | + | chr6.1:74695697-74695716 | MS.gene052419:intron | 75.0% | |
| CACCCCCCGCATGTGGGTGG+TGG | - | chr6.1:74695696-74695715 | None:intergenic | 75.0% | |
| CCACCCACATGCGGGGGGTG+GGG | + | chr6.1:74695696-74695715 | MS.gene052419:intron | 75.0% | |
| GGTACGCGCTGCTGCCCCTG+AGG | + | chr6.1:74694957-74694976 | MS.gene052419:CDS | 75.0% | |
| ! | CCCCACCCCCCGCATGTGGG+TGG | - | chr6.1:74695699-74695718 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 74691956 | 74696639 | 74691956 | ID=MS.gene052419 |
| chr6.1 | mRNA | 74691956 | 74696639 | 74691956 | ID=MS.gene052419.t1;Parent=MS.gene052419 |
| chr6.1 | exon | 74691956 | 74692089 | 74691956 | ID=MS.gene052419.t1.exon1;Parent=MS.gene052419.t1 |
| chr6.1 | CDS | 74691956 | 74692089 | 74691956 | ID=cds.MS.gene052419.t1;Parent=MS.gene052419.t1 |
| chr6.1 | exon | 74692174 | 74692303 | 74692174 | ID=MS.gene052419.t1.exon2;Parent=MS.gene052419.t1 |
| chr6.1 | CDS | 74692174 | 74692303 | 74692174 | ID=cds.MS.gene052419.t1;Parent=MS.gene052419.t1 |
| chr6.1 | exon | 74694605 | 74694805 | 74694605 | ID=MS.gene052419.t1.exon3;Parent=MS.gene052419.t1 |
| chr6.1 | CDS | 74694605 | 74694805 | 74694605 | ID=cds.MS.gene052419.t1;Parent=MS.gene052419.t1 |
| chr6.1 | exon | 74694898 | 74695065 | 74694898 | ID=MS.gene052419.t1.exon4;Parent=MS.gene052419.t1 |
| chr6.1 | CDS | 74694898 | 74695065 | 74694898 | ID=cds.MS.gene052419.t1;Parent=MS.gene052419.t1 |
| chr6.1 | exon | 74696196 | 74696639 | 74696196 | ID=MS.gene052419.t1.exon5;Parent=MS.gene052419.t1 |
| chr6.1 | CDS | 74696196 | 74696639 | 74696196 | ID=cds.MS.gene052419.t1;Parent=MS.gene052419.t1 |
| Gene Sequence |
| Protein sequence |
