Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63456.t1 | XP_013453051.1 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 1.10E-202 | 715.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63456.t1 | P70122 | 50.8 | 246 | 118 | 2 | 4 | 247 | 2 | 246 | 4.9e-63 | 243.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63456.t1 | A0A072UBA1 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 7.8e-203 | 715.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene63456.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052419 | MS.gene63456 | 0.840133 | 1.04E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63456.t1 | MTR_6g085170 | 98.883 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63456.t1 | AT1G43860 | 62.803 | 371 | 124 | 6 | 1 | 358 | 1 | 370 | 2.13e-167 | 472 |
| MS.gene63456.t1 | AT1G43860 | 57.681 | 345 | 123 | 7 | 27 | 358 | 1 | 335 | 3.84e-136 | 391 |
Find 80 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACGGATTCAGAAGTTCTT+TGG | 0.262575 | 6.3:-79330292 | None:intergenic |
| TACAACAATGTCTCGTTCTT+TGG | 0.271366 | 6.3:+79325887 | None:intergenic |
| CACGGATTCAGAAGTTCTTT+GGG | 0.284543 | 6.3:-79330291 | None:intergenic |
| ACAGGCTCTGGAGTTGATTC+AGG | 0.285367 | 6.3:+79328833 | MS.gene63456:intron |
| TCATTCCAGTATTTGCTTAG+AGG | 0.304623 | 6.3:+79326219 | MS.gene63456:CDS |
| ATTGGAGCCTGGTCTGTATA+AGG | 0.329038 | 6.3:+79330145 | MS.gene63456:CDS |
| TGCTTCTTGGAGGTGCTGTT+TGG | 0.331667 | 6.3:-79328721 | None:intergenic |
| CAATGCTGTCTAGTCAGTTC+AGG | 0.331986 | 6.3:+79328590 | MS.gene63456:CDS |
| AGGTGTTCTTGCTAAGTCTA+AGG | 0.333707 | 6.3:+79326168 | MS.gene63456:CDS |
| ACCCTAACACCGTTCTTTCA+TGG | 0.342417 | 6.3:+79325994 | MS.gene63456:CDS |
| CGCCATGAAAGAACGGTGTT+AGG | 0.353355 | 6.3:-79325996 | None:intergenic |
| GGAGGAAGTACCTATCCTTT+TGG | 0.369437 | 6.3:+79328917 | MS.gene63456:CDS |
| CTCACTCTCTTTATGTGGAT+GGG | 0.371029 | 6.3:+79330219 | MS.gene63456:CDS |
| TTTAAAGAAAGGGGAACTTC+AGG | 0.373529 | 6.3:+79328546 | MS.gene63456:CDS |
| AGAAGAGTGCACAGCAGATA+TGG | 0.383434 | 6.3:+79330514 | MS.gene63456:CDS |
| ACAAACCTCTAAGCAAATAC+TGG | 0.388442 | 6.3:-79326224 | None:intergenic |
| TGAATCAAAATCTGATTTGA+AGG | 0.396855 | 6.3:+79330544 | MS.gene63456:CDS |
| GCTCACTCTCTTTATGTGGA+TGG | 0.397818 | 6.3:+79330218 | MS.gene63456:CDS |
| AAAGGGGAACTTCAGGTTGC+TGG | 0.407398 | 6.3:+79328553 | MS.gene63456:CDS |
| ACCGTTCTTTCATGGCGTTC+CGG | 0.423741 | 6.3:+79326002 | MS.gene63456:CDS |
| AGGATAGGTACTTCCTCCTC+AGG | 0.427749 | 6.3:-79328912 | None:intergenic |
| TGTTGTCCCTCAGTAGGCTT+AGG | 0.430168 | 6.3:-79330359 | None:intergenic |
| TTGAAGATGCTAAGTTGTAC+AGG | 0.433138 | 6.3:+79330420 | MS.gene63456:CDS |
| TGTCCCTTCTTTAGAAATAA+CGG | 0.436135 | 6.3:-79328964 | None:intergenic |
| TCTTGCTCACTCTCTTTATG+TGG | 0.440257 | 6.3:+79330214 | MS.gene63456:CDS |
| TCAATCATGCTGATAGTGTA+AGG | 0.442974 | 6.3:-79328664 | None:intergenic |
| AAGGATTTGAATGCGGCGTT+TGG | 0.443098 | 6.3:+79326187 | MS.gene63456:CDS |
| CAAAAGCAAACAATTTCGTC+TGG | 0.443371 | 6.3:+79330335 | MS.gene63456:CDS |
| GTTCTTTGGGGCAATGGTGC+AGG | 0.443834 | 6.3:-79330278 | None:intergenic |
| TCAGAAGTTCTTTGGGGCAA+TGG | 0.449572 | 6.3:-79330284 | None:intergenic |
| AGGACAAGATACCTGCTTCT+TGG | 0.450486 | 6.3:-79328734 | None:intergenic |
| GCAACCGTTATTTCTAAAGA+AGG | 0.452079 | 6.3:+79328960 | MS.gene63456:CDS |
| GCAGCAGCGCGTACCCTCAA+TGG | 0.474471 | 6.3:-79328888 | None:intergenic |
| GTGCACTCTTCTTCAGATAG+TGG | 0.490526 | 6.3:-79330503 | None:intergenic |
| TTTGGTTGTTGTCCCTCAGT+AGG | 0.497330 | 6.3:-79330365 | None:intergenic |
| AGTGTAAGGGCGCTTAGTCT+CGG | 0.500797 | 6.3:-79328650 | None:intergenic |
| TCACTCTCTTTATGTGGATG+GGG | 0.502380 | 6.3:+79330220 | MS.gene63456:CDS |
| GCCATGAAAGAACGGTGTTA+GGG | 0.509375 | 6.3:-79325995 | None:intergenic |
| ACGCGCTGCTGCCCCTGAGG+AGG | 0.512519 | 6.3:+79328899 | MS.gene63456:CDS |
| ACAAGATACCTGCTTCTTGG+AGG | 0.519410 | 6.3:-79328731 | None:intergenic |
| GTGTAAGGGCGCTTAGTCTC+GGG | 0.522577 | 6.3:-79328649 | None:intergenic |
| CGTTCTTTGGTTCAACCAGT+AGG | 0.523435 | 6.3:+79325900 | MS.gene63456:CDS |
| CTATAAAACGGTGTCCATTG+AGG | 0.535043 | 6.3:+79328874 | MS.gene63456:CDS |
| AAACAGCACCTCCAAGAAGC+AGG | 0.539561 | 6.3:+79328723 | MS.gene63456:CDS |
| TGTTTGGATCAACAGCGAAA+TGG | 0.541879 | 6.3:-79328705 | None:intergenic |
| TATAAAACGGTGTCCATTGA+GGG | 0.542061 | 6.3:+79328875 | MS.gene63456:CDS |
| TGAAGTGTTGCAGTCACATA+CGG | 0.542659 | 6.3:+79326126 | MS.gene63456:CDS |
| AGAAGCACTACCCTATAAAA+CGG | 0.553845 | 6.3:+79328862 | MS.gene63456:CDS |
| AAAAGTCTTGTGCATTACAA+TGG | 0.555238 | 6.3:-79328623 | None:intergenic |
| AATGCTGTCTAGTCAGTTCA+GGG | 0.557997 | 6.3:+79328591 | MS.gene63456:CDS |
| GCTTGTGCCACTCACTCTTG+TGG | 0.558268 | 6.3:-79330448 | None:intergenic |
| CAACCGTTATTTCTAAAGAA+GGG | 0.568663 | 6.3:+79328961 | MS.gene63456:CDS |
| GCATGATTGAACGCCTCATG+AGG | 0.570502 | 6.3:+79328677 | MS.gene63456:CDS |
| GGAAAAGCTGAGCGAGTGGA+AGG | 0.571341 | 6.3:+79328938 | MS.gene63456:CDS |
| TTTATCATTCAGCTCAAGCA+CGG | 0.574553 | 6.3:-79330309 | None:intergenic |
| TTTGTTATGAATAAGATGCA+TGG | 0.575041 | 6.3:+79330179 | MS.gene63456:CDS |
| CACTCTTCTTCAGATAGTGG+AGG | 0.576466 | 6.3:-79330500 | None:intergenic |
| GGATAGGTACTTCCTCCTCA+GGG | 0.584943 | 6.3:-79328911 | None:intergenic |
| GCCGGAACGCCATGAAAGAA+CGG | 0.596078 | 6.3:-79326003 | None:intergenic |
| GTTTATACGAATGTTTCGAA+AGG | 0.596420 | 6.3:+79326148 | MS.gene63456:CDS |
| TTCAGGTTGCTGGTAAAGAG+AGG | 0.599142 | 6.3:+79328563 | MS.gene63456:CDS |
| CAATCATGCTGATAGTGTAA+GGG | 0.615053 | 6.3:-79328663 | None:intergenic |
| TGAAGATGCTAAGTTGTACA+GGG | 0.615157 | 6.3:+79330421 | MS.gene63456:CDS |
| AGTCTTGTGCATTACAATGG+TGG | 0.616545 | 6.3:-79328620 | None:intergenic |
| GGTACGCGCTGCTGCCCCTG+AGG | 0.619533 | 6.3:+79328896 | MS.gene63456:CDS |
| CGAAATGGATATCCCTCATG+AGG | 0.633330 | 6.3:-79328690 | None:intergenic |
| TCAGGTTGCTGGTAAAGAGA+GGG | 0.634218 | 6.3:+79328564 | MS.gene63456:CDS |
| ACGGATTCAGAAGTTCTTTG+GGG | 0.636915 | 6.3:-79330290 | None:intergenic |
| TGACAATCCTTATACAGACC+AGG | 0.646899 | 6.3:-79330152 | None:intergenic |
| GGGAACACCACAAGAGTGAG+TGG | 0.646994 | 6.3:+79330441 | MS.gene63456:CDS |
| ACAATATGAAGCGTAAAACA+AGG | 0.648014 | 6.3:+79330471 | MS.gene63456:CDS |
| TGTGGATGGGGATACTCATG+TGG | 0.649096 | 6.3:+79330232 | MS.gene63456:CDS |
| ACTCTTCTTCAGATAGTGGA+GGG | 0.651530 | 6.3:-79330499 | None:intergenic |
| CATGATTGAACGCCTCATGA+GGG | 0.655277 | 6.3:+79328678 | MS.gene63456:CDS |
| GTCTGGACCTAAGCCTACTG+AGG | 0.658281 | 6.3:+79330352 | MS.gene63456:CDS |
| TCTGGACCTAAGCCTACTGA+GGG | 0.681737 | 6.3:+79330353 | MS.gene63456:CDS |
| TAAGTCTAAGGATTTGAATG+CGG | 0.687944 | 6.3:+79326180 | MS.gene63456:CDS |
| GTTGTTCGTCTCAAGAAACA+CGG | 0.697669 | 6.3:+79325948 | MS.gene63456:CDS |
| GATAGGTACTTCCTCCTCAG+GGG | 0.704780 | 6.3:-79328910 | None:intergenic |
| TGTGGATTACAATGATCACG+AGG | 0.775410 | 6.3:+79330250 | MS.gene63456:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATTATAATTAATAAC+AGG | - | chr6.3:79330010-79330029 | None:intergenic | 10.0% |
| !! | AAGAATTATAATTAATAACA+GGG | - | chr6.3:79330009-79330028 | None:intergenic | 10.0% |
| !! | AAAAAAAAGAAAAAAGCTTA+TGG | - | chr6.3:79327977-79327996 | None:intergenic | 15.0% |
| !! | AAAATAAAACTAGAAATACA+AGG | + | chr6.3:79329416-79329435 | MS.gene63456:intron | 15.0% |
| !! | AAATAATGTTTATTCAAAGT+TGG | + | chr6.3:79327808-79327827 | MS.gene63456:intron | 15.0% |
| !! | ACATAATAATCACAAAAATT+AGG | - | chr6.3:79326048-79326067 | None:intergenic | 15.0% |
| !! | AGAATATTTACAACTTATTT+GGG | + | chr6.3:79328185-79328204 | MS.gene63456:intron | 15.0% |
| !! | AGAATTATAATTAATAACAG+GGG | - | chr6.3:79330008-79330027 | None:intergenic | 15.0% |
| !! | ATTTCAAATATTATTACTGT+TGG | + | chr6.3:79329982-79330001 | MS.gene63456:intron | 15.0% |
| !! | CATAATAATCACAAAAATTA+GGG | - | chr6.3:79326047-79326066 | None:intergenic | 15.0% |
| !!! | AAGATATAAGTTGATTATAA+GGG | - | chr6.3:79328363-79328382 | None:intergenic | 15.0% |
| !!! | ATAAGCTTTTTTCTTTTTTT+TGG | + | chr6.3:79327976-79327995 | MS.gene63456:intron | 15.0% |
| !!! | TTCTTTTTTGATGAATAAAA+GGG | - | chr6.3:79327748-79327767 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTTGATGAATAAA+AGG | - | chr6.3:79327749-79327768 | None:intergenic | 15.0% |
| !!! | TTTTTTGGAATAAGTTATTT+AGG | + | chr6.3:79327991-79328010 | MS.gene63456:intron | 15.0% |
| !! | AATTGATCTGATTTCTAATT+GGG | + | chr6.3:79330108-79330127 | MS.gene63456:intron | 20.0% |
| !! | ACTAATTATTATGCATAAAC+TGG | - | chr6.3:79328465-79328484 | None:intergenic | 20.0% |
| !! | AGAATTAATTTATAACCACT+TGG | - | chr6.3:79329761-79329780 | None:intergenic | 20.0% |
| !! | CTAATTATTATGCATAAACT+GGG | - | chr6.3:79328464-79328483 | None:intergenic | 20.0% |
| !! | GAGAATATTTACAACTTATT+TGG | + | chr6.3:79328184-79328203 | MS.gene63456:intron | 20.0% |
| !! | TAATTGATCTGATTTCTAAT+TGG | + | chr6.3:79330107-79330126 | MS.gene63456:intron | 20.0% |
| !! | TATATGAGACAATCATTATA+TGG | - | chr6.3:79328776-79328795 | None:intergenic | 20.0% |
| !! | TTTACATAATTTATGCTTAG+AGG | + | chr6.3:79326870-79326889 | MS.gene63456:intron | 20.0% |
| !!! | AGGTTTTTAGTTTCTATTTT+GGG | + | chr6.3:79327714-79327733 | MS.gene63456:intron | 20.0% |
| !!! | AGTTAATTTGATGGATTAAT+CGG | + | chr6.3:79326077-79326096 | MS.gene63456:intron | 20.0% |
| !!! | ATTGACTTTTTAATAAGCTT+TGG | + | chr6.3:79326649-79326668 | MS.gene63456:intron | 20.0% |
| !!! | CAAGATATAAGTTGATTATA+AGG | - | chr6.3:79328364-79328383 | None:intergenic | 20.0% |
| !!! | GATTAATTGAGTTAATTTGA+TGG | + | chr6.3:79326068-79326087 | MS.gene63456:intron | 20.0% |
| !!! | TATTTGAAATGAAAGAATCA+TGG | - | chr6.3:79329972-79329991 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGATGAATAAAAG+GGG | - | chr6.3:79327747-79327766 | None:intergenic | 20.0% |
| ! | ACCAGATAAAATGTGATAAA+AGG | - | chr6.3:79329361-79329380 | None:intergenic | 25.0% |
| ! | ACTATCACAATAAACTAGAA+AGG | - | chr6.3:79327680-79327699 | None:intergenic | 25.0% |
| ! | ACTTTCATATAAGTTGTAAG+CGG | - | chr6.3:79328031-79328050 | None:intergenic | 25.0% |
| ! | ATAATCAACTTATATCTTGC+AGG | + | chr6.3:79328365-79328384 | MS.gene63456:intron | 25.0% |
| ! | CATAATTTATGCTTAGAGTT+TGG | + | chr6.3:79326874-79326893 | MS.gene63456:intron | 25.0% |
| ! | CTTTGATTCTGCTAAAATTT+CGG | + | chr6.3:79330081-79330100 | MS.gene63456:intron | 25.0% |
| ! | GTATTTGTATTTATCTGCTA+AGG | + | chr6.3:79327254-79327273 | MS.gene63456:intron | 25.0% |
| ! | TAACCCATAAAAAAGCTAAT+GGG | + | chr6.3:79329923-79329942 | MS.gene63456:intron | 25.0% |
| ! | TACAGAAATCATACCAAAAA+TGG | + | chr6.3:79327363-79327382 | MS.gene63456:intron | 25.0% |
| ! | TACAGGAATATGTTAATAGT+CGG | + | chr6.3:79329249-79329268 | MS.gene63456:intron | 25.0% |
| ! | TCATAAACCCTCAAATAATA+AGG | - | chr6.3:79327627-79327646 | None:intergenic | 25.0% |
| ! | TGTCATAAATGTTCAAAAGA+TGG | - | chr6.3:79329317-79329336 | None:intergenic | 25.0% |
| ! | TTTATCCAACCCATAAAAAA+GGG | + | chr6.3:79329291-79329310 | MS.gene63456:intron | 25.0% |
| !! | ATTGTTTTCATGTCCTTTTT+AGG | + | chr6.3:79329462-79329481 | MS.gene63456:intron | 25.0% |
| !! | CATTTTATCCAACACAAAAA+CGG | + | chr6.3:79329200-79329219 | MS.gene63456:intron | 25.0% |
| !! | TCCTTTTATCACATTTTATC+TGG | + | chr6.3:79329357-79329376 | MS.gene63456:intron | 25.0% |
| !! | TCTTTTGAACATTTATGACA+AGG | + | chr6.3:79329317-79329336 | MS.gene63456:intron | 25.0% |
| !! | TGAATCAAAATCTGATTTGA+AGG | + | chr6.3:79330544-79330563 | MS.gene63456:CDS | 25.0% |
| !! | TTTGTTATGAATAAGATGCA+TGG | + | chr6.3:79330179-79330198 | MS.gene63456:CDS | 25.0% |
| !! | TTTTATCCAACCCATAAAAA+AGG | + | chr6.3:79329290-79329309 | MS.gene63456:intron | 25.0% |
| !!! | ACTTGTTTGTTTTGAAAACT+CGG | + | chr6.3:79329564-79329583 | MS.gene63456:intron | 25.0% |
| !!! | GAGGTTTTTAGTTTCTATTT+TGG | + | chr6.3:79327713-79327732 | MS.gene63456:intron | 25.0% |
| !!! | TGCTTGTTTTTGTTTTTTGT+TGG | + | chr6.3:79329654-79329673 | MS.gene63456:intron | 25.0% |
| !!! | TGTTGCAGATTTTAAAGAAA+GGG | + | chr6.3:79328536-79328555 | MS.gene63456:intron | 25.0% |
| !!! | TTTTAATAAGCTTTGGTGTT+AGG | + | chr6.3:79326656-79326675 | MS.gene63456:intron | 25.0% |
| AACATGACCAAATACTCATT+TGG | + | chr6.3:79329810-79329829 | MS.gene63456:intron | 30.0% | |
| AATTGTATATGTCTGTGTTG+TGG | + | chr6.3:79326353-79326372 | MS.gene63456:intron | 30.0% | |
| ACAATATGAAGCGTAAAACA+AGG | + | chr6.3:79330471-79330490 | MS.gene63456:CDS | 30.0% | |
| ACATGACCAAATACTCATTT+GGG | + | chr6.3:79329811-79329830 | MS.gene63456:intron | 30.0% | |
| AGCTCAACCTTATTATTTGA+GGG | + | chr6.3:79327617-79327636 | MS.gene63456:intron | 30.0% | |
| AGTGATTTAACTGTTAGTTG+AGG | + | chr6.3:79328482-79328501 | MS.gene63456:intron | 30.0% | |
| ATGGAACATTTATAGAGACA+TGG | - | chr6.3:79329953-79329972 | None:intergenic | 30.0% | |
| CATAATTTATGCTTAGAGGT+TGG | + | chr6.3:79326916-79326935 | MS.gene63456:intron | 30.0% | |
| CTAACCCATAAAAAAGCTAA+TGG | + | chr6.3:79329922-79329941 | MS.gene63456:intron | 30.0% | |
| GATTATGAAAGTCGTATTAC+AGG | + | chr6.3:79328815-79328834 | MS.gene63456:intron | 30.0% | |
| GCTTTATCCAATAGTTGAAA+AGG | - | chr6.3:79327445-79327464 | None:intergenic | 30.0% | |
| GTTGGATAAAATGTGGTAAA+AGG | - | chr6.3:79329281-79329300 | None:intergenic | 30.0% | |
| GTTTATACGAATGTTTCGAA+AGG | + | chr6.3:79326148-79326167 | MS.gene63456:CDS | 30.0% | |
| TAAAAACCTCTTAGAAAGAG+AGG | - | chr6.3:79327703-79327722 | None:intergenic | 30.0% | |
| TAACTCATTTCCTAAGCTTA+TGG | - | chr6.3:79327341-79327360 | None:intergenic | 30.0% | |
| TAAGCACTCATGCTTAATTT+GGG | + | chr6.3:79327215-79327234 | MS.gene63456:intron | 30.0% | |
| TAAGTCTAAGGATTTGAATG+CGG | + | chr6.3:79326180-79326199 | MS.gene63456:CDS | 30.0% | |
| TAGCTACAAAACAACTAACA+TGG | - | chr6.3:79326272-79326291 | None:intergenic | 30.0% | |
| TAGCTCAACCTTATTATTTG+AGG | + | chr6.3:79327616-79327635 | MS.gene63456:intron | 30.0% | |
| TATATCTGCATTTGCGTATA+TGG | + | chr6.3:79330047-79330066 | MS.gene63456:intron | 30.0% | |
| TGACATTGAATTGATCAAGT+AGG | - | chr6.3:79326947-79326966 | None:intergenic | 30.0% | |
| TGATATCATAAACCTACCTA+TGG | - | chr6.3:79327530-79327549 | None:intergenic | 30.0% | |
| TTAAGCACTCATGCTTAATT+TGG | + | chr6.3:79327214-79327233 | MS.gene63456:intron | 30.0% | |
| TTTATGCTTAGAGTTTGGTT+AGG | + | chr6.3:79326879-79326898 | MS.gene63456:intron | 30.0% | |
| ! | AAAAGTCTTGTGCATTACAA+TGG | - | chr6.3:79328626-79328645 | None:intergenic | 30.0% |
| ! | ATAAGCACTGTCATAATGTT+TGG | + | chr6.3:79327920-79327939 | MS.gene63456:intron | 30.0% |
| ! | ATTTTATTCTCTGTAACCCT+GGG | + | chr6.3:79329042-79329061 | MS.gene63456:intron | 30.0% |
| ! | TAAGCACTGTCATAATGTTT+GGG | + | chr6.3:79327921-79327940 | MS.gene63456:intron | 30.0% |
| ! | TGTCCCTTCTTTAGAAATAA+CGG | - | chr6.3:79328967-79328986 | None:intergenic | 30.0% |
| ! | TTGATTATAAGGGTATGCTT+GGG | - | chr6.3:79328353-79328372 | None:intergenic | 30.0% |
| !! | ATGGAATTCTTTAGAATGAC+AGG | - | chr6.3:79328757-79328776 | None:intergenic | 30.0% |
| !! | CAACCGTTATTTCTAAAGAA+GGG | + | chr6.3:79328961-79328980 | MS.gene63456:CDS | 30.0% |
| !! | CTGTTGCAGATTTTAAAGAA+AGG | + | chr6.3:79328535-79328554 | MS.gene63456:intron | 30.0% |
| !! | GTTGCAGATTTTAAAGAAAG+GGG | + | chr6.3:79328537-79328556 | MS.gene63456:intron | 30.0% |
| !! | TAATTTGATGGATTAATCGG+TGG | + | chr6.3:79326080-79326099 | MS.gene63456:intron | 30.0% |
| !! | TATCTACAGTTGTTTTCAGT+AGG | + | chr6.3:79328210-79328229 | MS.gene63456:intron | 30.0% |
| !! | TTTATGGGTTGGATAAAATG+TGG | - | chr6.3:79329288-79329307 | None:intergenic | 30.0% |
| !!! | AAAAGATGGCCCTTTTTTAT+GGG | - | chr6.3:79329303-79329322 | None:intergenic | 30.0% |
| !!! | ACTTCCCATTAGCTTTTTTA+TGG | - | chr6.3:79329930-79329949 | None:intergenic | 30.0% |
| !!! | CTTCCCATTAGCTTTTTTAT+GGG | - | chr6.3:79329929-79329948 | None:intergenic | 30.0% |
| !!! | GTTTTTGTTTTTTGTTGGCA+TGG | + | chr6.3:79329659-79329678 | MS.gene63456:intron | 30.0% |
| !!! | TGTTTTGAAAACTCGGTATT+CGG | + | chr6.3:79329571-79329590 | MS.gene63456:intron | 30.0% |
| !!! | TTTTGATAAGCTTTGGTGTT+CGG | + | chr6.3:79327074-79327093 | MS.gene63456:intron | 30.0% |
| AAGTTTGAGAAGTTGTTCGT+TGG | + | chr6.3:79329391-79329410 | MS.gene63456:intron | 35.0% | |
| AATAACCAACTTCTGATCGA+AGG | - | chr6.3:79326852-79326871 | None:intergenic | 35.0% | |
| AATGGCTGAGTTATCAGTTA+TGG | + | chr6.3:79327381-79327400 | MS.gene63456:intron | 35.0% | |
| AATTGTAAAGTTCTCCCATG+CGG | + | chr6.3:79327572-79327591 | MS.gene63456:intron | 35.0% | |
| ACAAACCTCTAAGCAAATAC+TGG | - | chr6.3:79326227-79326246 | None:intergenic | 35.0% | |
| ATAAACTAGAAAGGCTAGGT+AGG | - | chr6.3:79327671-79327690 | None:intergenic | 35.0% | |
| ATGGCTGAGTTATCAGTTAT+GGG | + | chr6.3:79327382-79327401 | MS.gene63456:intron | 35.0% | |
| ATTCAGTTAGCAATATCACG+TGG | + | chr6.3:79327419-79327438 | MS.gene63456:intron | 35.0% | |
| CAAAAGCAAACAATTTCGTC+TGG | + | chr6.3:79330335-79330354 | MS.gene63456:CDS | 35.0% | |
| CACAATAAACTAGAAAGGCT+AGG | - | chr6.3:79327675-79327694 | None:intergenic | 35.0% | |
| CAGGGTTACAGAGAATAAAA+TGG | - | chr6.3:79329043-79329062 | None:intergenic | 35.0% | |
| CATGGGAGAACTTTACAATT+GGG | - | chr6.3:79327572-79327591 | None:intergenic | 35.0% | |
| CTTCTATAATCAAGACAACG+TGG | - | chr6.3:79328289-79328308 | None:intergenic | 35.0% | |
| GAACACCAAAGCTTATCAAA+AGG | - | chr6.3:79327075-79327094 | None:intergenic | 35.0% | |
| GATATACCAGACACAACTTA+TGG | - | chr6.3:79330033-79330052 | None:intergenic | 35.0% | |
| GCTAAGGTATGCATTTATCA+AGG | + | chr6.3:79327270-79327289 | MS.gene63456:intron | 35.0% | |
| TAAACTAGAAAGGCTAGGTA+GGG | - | chr6.3:79327670-79327689 | None:intergenic | 35.0% | |
| TATAAAACGGTGTCCATTGA+GGG | + | chr6.3:79328875-79328894 | MS.gene63456:CDS | 35.0% | |
| TATCACATGTCCATAAGCTT+AGG | + | chr6.3:79327328-79327347 | MS.gene63456:intron | 35.0% | |
| TCATTCCAGTATTTGCTTAG+AGG | + | chr6.3:79326219-79326238 | MS.gene63456:CDS | 35.0% | |
| TGAACATCTGTGATAGTTAC+AGG | + | chr6.3:79329232-79329251 | MS.gene63456:intron | 35.0% | |
| TGAAGATGCTAAGTTGTACA+GGG | + | chr6.3:79330421-79330440 | MS.gene63456:CDS | 35.0% | |
| TTCTTTCCATAAGTTGTGTC+TGG | + | chr6.3:79330024-79330043 | MS.gene63456:intron | 35.0% | |
| TTGAAGATGCTAAGTTGTAC+AGG | + | chr6.3:79330420-79330439 | MS.gene63456:CDS | 35.0% | |
| TTTAAAGAAAGGGGAACTTC+AGG | + | chr6.3:79328546-79328565 | MS.gene63456:CDS | 35.0% | |
| TTTATCATTCAGCTCAAGCA+CGG | - | chr6.3:79330312-79330331 | None:intergenic | 35.0% | |
| TTTGGGTAGAATTTGGTCAT+GGG | + | chr6.3:79329491-79329510 | MS.gene63456:intron | 35.0% | |
| ! | AATACAAGGCGCATTTTATC+TGG | + | chr6.3:79329430-79329449 | MS.gene63456:intron | 35.0% |
| ! | ACAGACCTTTTGATAAGCTT+TGG | + | chr6.3:79327067-79327086 | MS.gene63456:intron | 35.0% |
| ! | CAATCATGCTGATAGTGTAA+GGG | - | chr6.3:79328666-79328685 | None:intergenic | 35.0% |
| ! | CATGCATTTTCTGTAAGTTG+TGG | + | chr6.3:79329864-79329883 | MS.gene63456:intron | 35.0% |
| ! | CATTTTATTCTCTGTAACCC+TGG | + | chr6.3:79329041-79329060 | MS.gene63456:intron | 35.0% |
| ! | GCATTAAGAGTTCTGATTGA+AGG | - | chr6.3:79327037-79327056 | None:intergenic | 35.0% |
| ! | GTTGATTATAAGGGTATGCT+TGG | - | chr6.3:79328354-79328373 | None:intergenic | 35.0% |
| ! | TCAATCATGCTGATAGTGTA+AGG | - | chr6.3:79328667-79328686 | None:intergenic | 35.0% |
| ! | TCAATGGACACCGTTTTATA+GGG | - | chr6.3:79328875-79328894 | None:intergenic | 35.0% |
| ! | TGTGTTGCTCAGTTATTTCA+TGG | + | chr6.3:79329015-79329034 | MS.gene63456:intron | 35.0% |
| ! | TTTAGAATTTACGTACACGC+CGG | - | chr6.3:79326024-79326043 | None:intergenic | 35.0% |
| !! | AACATGATCCGTTTTTGTGT+TGG | - | chr6.3:79329211-79329230 | None:intergenic | 35.0% |
| !! | ACTGATAACTCAGCCATTTT+TGG | - | chr6.3:79327379-79327398 | None:intergenic | 35.0% |
| !! | AGAAGCACTACCCTATAAAA+CGG | + | chr6.3:79328862-79328881 | MS.gene63456:CDS | 35.0% |
| !! | GCAACCGTTATTTCTAAAGA+AGG | + | chr6.3:79328960-79328979 | MS.gene63456:CDS | 35.0% |
| !! | TCCTTTTTAGGCAAGCTTTT+GGG | + | chr6.3:79329474-79329493 | MS.gene63456:intron | 35.0% |
| !! | TTTTGGGTAGAATTTGGTCA+TGG | + | chr6.3:79329490-79329509 | MS.gene63456:intron | 35.0% |
| !!! | CAAAAGATGGCCCTTTTTTA+TGG | - | chr6.3:79329304-79329323 | None:intergenic | 35.0% |
| !!! | CTGGTTTGCTTGTTTTAGTT+GGG | + | chr6.3:79329707-79329726 | MS.gene63456:intron | 35.0% |
| !!! | TCTGGTTTGCTTGTTTTAGT+TGG | + | chr6.3:79329706-79329725 | MS.gene63456:intron | 35.0% |
| !!! | TTGTTTTTTGTTGGCATGGT+CGG | + | chr6.3:79329663-79329682 | MS.gene63456:intron | 35.0% |
| AACATATCAATGCCCCGTTT+AGG | - | chr6.3:79326496-79326515 | None:intergenic | 40.0% | |
| AATGCTGTCTAGTCAGTTCA+GGG | + | chr6.3:79328591-79328610 | MS.gene63456:CDS | 40.0% | |
| ACACTCACTTAGGGTACATA+TGG | - | chr6.3:79328156-79328175 | None:intergenic | 40.0% | |
| ACCACTTGGTTCCAAATACA+AGG | - | chr6.3:79329747-79329766 | None:intergenic | 40.0% | |
| ACCCAAAAGCTTGCCTAAAA+AGG | - | chr6.3:79329478-79329497 | None:intergenic | 40.0% | |
| ACGGATTCAGAAGTTCTTTG+GGG | - | chr6.3:79330293-79330312 | None:intergenic | 40.0% | |
| AGGTGTTCTTGCTAAGTCTA+AGG | + | chr6.3:79326168-79326187 | MS.gene63456:CDS | 40.0% | |
| ATAGCTATGAAACACTGTCG+TGG | + | chr6.3:79326982-79327001 | MS.gene63456:intron | 40.0% | |
| ATTTGCAGCTTGAGTGCTTA+AGG | - | chr6.3:79327874-79327893 | None:intergenic | 40.0% | |
| CACGGATTCAGAAGTTCTTT+GGG | - | chr6.3:79330294-79330313 | None:intergenic | 40.0% | |
| CTATAAAACGGTGTCCATTG+AGG | + | chr6.3:79328874-79328893 | MS.gene63456:CDS | 40.0% | |
| CTCACTCTCTTTATGTGGAT+GGG | + | chr6.3:79330219-79330238 | MS.gene63456:CDS | 40.0% | |
| CTTCCAAACACACTCACTTA+GGG | - | chr6.3:79328165-79328184 | None:intergenic | 40.0% | |
| GATAGTCCTCTCTTTCTAAG+AGG | + | chr6.3:79327694-79327713 | MS.gene63456:intron | 40.0% | |
| GCATGGGAGAACTTTACAAT+TGG | - | chr6.3:79327573-79327592 | None:intergenic | 40.0% | |
| GCTAGGTTACACCTTGTATT+TGG | + | chr6.3:79329733-79329752 | MS.gene63456:intron | 40.0% | |
| GTAGCTATGACACACTGATA+TGG | + | chr6.3:79326285-79326304 | MS.gene63456:intron | 40.0% | |
| GTTGTTCGTCTCAAGAAACA+CGG | + | chr6.3:79325948-79325967 | MS.gene63456:CDS | 40.0% | |
| TAAGCACTCAAGCTGCAAAT+GGG | + | chr6.3:79327874-79327893 | MS.gene63456:intron | 40.0% | |
| TACAATTGGGACTTAAGTCG+CGG | - | chr6.3:79327559-79327578 | None:intergenic | 40.0% | |
| TACACATCAGTTCCATAGGT+AGG | + | chr6.3:79327515-79327534 | MS.gene63456:intron | 40.0% | |
| TATGGAACTGATGTGTAGCA+GGG | - | chr6.3:79327512-79327531 | None:intergenic | 40.0% | |
| TCACTCTCTTTATGTGGATG+GGG | + | chr6.3:79330220-79330239 | MS.gene63456:CDS | 40.0% | |
| TCTTCCAAACACACTCACTT+AGG | - | chr6.3:79328166-79328185 | None:intergenic | 40.0% | |
| TCTTGCTCACTCTCTTTATG+TGG | + | chr6.3:79330214-79330233 | MS.gene63456:CDS | 40.0% | |
| TGACAATCCTTATACAGACC+AGG | - | chr6.3:79330155-79330174 | None:intergenic | 40.0% | |
| TGTTTGGATCAACAGCGAAA+TGG | - | chr6.3:79328708-79328727 | None:intergenic | 40.0% | |
| TTAAGCACTCAAGCTGCAAA+TGG | + | chr6.3:79327873-79327892 | MS.gene63456:intron | 40.0% | |
| TTGTTAGCTGGAAAACACTC+TGG | + | chr6.3:79329688-79329707 | MS.gene63456:intron | 40.0% | |
| ! | ACCTTGTATTTGGAACCAAG+TGG | + | chr6.3:79329743-79329762 | MS.gene63456:intron | 40.0% |
| ! | AGTCTTGTGCATTACAATGG+TGG | - | chr6.3:79328623-79328642 | None:intergenic | 40.0% |
| ! | CACTCATGCTTAATTTGGGT+TGG | + | chr6.3:79327219-79327238 | MS.gene63456:intron | 40.0% |
| ! | CAGGGGTTAATCTTTTGTTC+GGG | + | chr6.3:79329514-79329533 | MS.gene63456:intron | 40.0% |
| ! | CAGTGTCCTAAAAGTGTAGT+TGG | - | chr6.3:79327008-79327027 | None:intergenic | 40.0% |
| ! | CAGTTATGGGCTATACATCA+AGG | + | chr6.3:79327395-79327414 | MS.gene63456:intron | 40.0% |
| ! | CTCAATGGACACCGTTTTAT+AGG | - | chr6.3:79328876-79328895 | None:intergenic | 40.0% |
| ! | CTCAGCTTTTCCAAAAGGAT+AGG | - | chr6.3:79328930-79328949 | None:intergenic | 40.0% |
| ! | CTGATTTCTAATTGGGTTGC+AGG | + | chr6.3:79330115-79330134 | MS.gene63456:intron | 40.0% |
| ! | GCAGGGGTTAATCTTTTGTT+CGG | + | chr6.3:79329513-79329532 | MS.gene63456:intron | 40.0% |
| ! | TGGGTTGCAGGTTTTTGAAT+TGG | + | chr6.3:79330127-79330146 | MS.gene63456:intron | 40.0% |
| ! | TGTGGATTACAATGATCACG+AGG | + | chr6.3:79330250-79330269 | MS.gene63456:CDS | 40.0% |
| !! | ACTCTTCTTCAGATAGTGGA+GGG | - | chr6.3:79330502-79330521 | None:intergenic | 40.0% |
| !! | AGAGTGTTTTCCAGCTAACA+AGG | - | chr6.3:79329689-79329708 | None:intergenic | 40.0% |
| !! | CGCATTTTATCTGGTTTCTC+AGG | + | chr6.3:79329439-79329458 | MS.gene63456:intron | 40.0% |
| !! | CTTCTAGAACAGAAAACCCA+GGG | - | chr6.3:79329061-79329080 | None:intergenic | 40.0% |
| !! | GCAAGCTTTTGGGTAGAATT+TGG | + | chr6.3:79329484-79329503 | MS.gene63456:intron | 40.0% |
| !! | GGGCATTGATATGTTGATAC+TGG | + | chr6.3:79326501-79326520 | MS.gene63456:intron | 40.0% |
| !! | GTCCTTTTTAGGCAAGCTTT+TGG | + | chr6.3:79329473-79329492 | MS.gene63456:intron | 40.0% |
| !! | GTTAATCGCTTTTGACCTAC+TGG | - | chr6.3:79325918-79325937 | None:intergenic | 40.0% |
| !! | TAGGTAGGGTAATGGAATCA+GGG | - | chr6.3:79327656-79327675 | None:intergenic | 40.0% |
| !! | TGAAGTGTTGCAGTCACATA+CGG | + | chr6.3:79326126-79326145 | MS.gene63456:CDS | 40.0% |
| !!! | CAACTACACTTTTAGGACAC+TGG | + | chr6.3:79327006-79327025 | MS.gene63456:intron | 40.0% |
| !!! | GTGTTGCACTTGTTTTGCTT+TGG | - | chr6.3:79330386-79330405 | None:intergenic | 40.0% |
| !!! | TCGGTGGTTTTGTAGTGAAA+AGG | + | chr6.3:79326096-79326115 | MS.gene63456:intron | 40.0% |
| !!! | TTGTTTTAGTTGGGTCTGCT+AGG | + | chr6.3:79329716-79329735 | MS.gene63456:intron | 40.0% |
| AAAACTCGGTATTCGGTCCA+AGG | + | chr6.3:79329578-79329597 | MS.gene63456:intron | 45.0% | |
| AAGGATTTGAATGCGGCGTT+TGG | + | chr6.3:79326187-79326206 | MS.gene63456:CDS | 45.0% | |
| ACAAGATACCTGCTTCTTGG+AGG | - | chr6.3:79328734-79328753 | None:intergenic | 45.0% | |
| ACACTCCTTCGATCAGAAGT+TGG | + | chr6.3:79326844-79326863 | MS.gene63456:intron | 45.0% | |
| ACAGACACGGAAACCTAAAC+GGG | + | chr6.3:79326480-79326499 | MS.gene63456:intron | 45.0% | |
| ACAGCGCCCAAATGAGTATT+TGG | - | chr6.3:79329820-79329839 | None:intergenic | 45.0% | |
| ACCCTAACACCGTTCTTTCA+TGG | + | chr6.3:79325994-79326013 | MS.gene63456:CDS | 45.0% | |
| AGAAAGGCTAGGTAGGGTAA+TGG | - | chr6.3:79327664-79327683 | None:intergenic | 45.0% | |
| AGGACAAGATACCTGCTTCT+TGG | - | chr6.3:79328737-79328756 | None:intergenic | 45.0% | |
| ATGCCTTCAATCAGACGAGT+CGG | + | chr6.3:79326599-79326618 | MS.gene63456:intron | 45.0% | |
| ATTGGAGCCTGGTCTGTATA+AGG | + | chr6.3:79330145-79330164 | MS.gene63456:CDS | 45.0% | |
| CAATGCTGTCTAGTCAGTTC+AGG | + | chr6.3:79328590-79328609 | MS.gene63456:CDS | 45.0% | |
| CACAGACACGGAAACCTAAA+CGG | + | chr6.3:79326479-79326498 | MS.gene63456:intron | 45.0% | |
| CATGATTGAACGCCTCATGA+GGG | + | chr6.3:79328678-79328697 | MS.gene63456:CDS | 45.0% | |
| CGAAATGGATATCCCTCATG+AGG | - | chr6.3:79328693-79328712 | None:intergenic | 45.0% | |
| CTATGGAACTGATGTGTAGC+AGG | - | chr6.3:79327513-79327532 | None:intergenic | 45.0% | |
| CTGCTACACATCAGTTCCAT+AGG | + | chr6.3:79327511-79327530 | MS.gene63456:intron | 45.0% | |
| GAAAGTCGTATTACAGGCTC+TGG | + | chr6.3:79328821-79328840 | MS.gene63456:intron | 45.0% | |
| GCACGGATTCAGAAGTTCTT+TGG | - | chr6.3:79330295-79330314 | None:intergenic | 45.0% | |
| GCGATCAACCTTATCCAACA+AGG | + | chr6.3:79327483-79327502 | MS.gene63456:intron | 45.0% | |
| GCTCACTCTCTTTATGTGGA+TGG | + | chr6.3:79330218-79330237 | MS.gene63456:CDS | 45.0% | |
| GTACCCTAAGTGAGTGTGTT+TGG | + | chr6.3:79328159-79328178 | MS.gene63456:intron | 45.0% | |
| GTAGAATTTGGTCATGGGCA+GGG | + | chr6.3:79329496-79329515 | MS.gene63456:intron | 45.0% | |
| GTGCACTCTTCTTCAGATAG+TGG | - | chr6.3:79330506-79330525 | None:intergenic | 45.0% | |
| TAGAATTTGGTCATGGGCAG+GGG | + | chr6.3:79329497-79329516 | MS.gene63456:intron | 45.0% | |
| TATGTTGGACACTGACGTGT+AGG | + | chr6.3:79326814-79326833 | MS.gene63456:intron | 45.0% | |
| TGTCAGTGTCGTGTCTATGT+TGG | + | chr6.3:79326799-79326818 | MS.gene63456:intron | 45.0% | |
| TTTGGTTGTTGTCCCTCAGT+AGG | - | chr6.3:79330368-79330387 | None:intergenic | 45.0% | |
| ! | AAGCCTTATGCCACTAAGTG+GGG | + | chr6.3:79329117-79329136 | MS.gene63456:intron | 45.0% |
| ! | ACGCTTTCGATCAGAAGTGT+CGG | + | chr6.3:79326403-79326422 | MS.gene63456:intron | 45.0% |
| ! | ACTCGCTCAGCTTTTCCAAA+AGG | - | chr6.3:79328935-79328954 | None:intergenic | 45.0% |
| ! | AGAAGAGTGCACAGCAGATA+TGG | + | chr6.3:79330514-79330533 | MS.gene63456:CDS | 45.0% |
| ! | ATAAGGGTATGCTTGGGACA+TGG | - | chr6.3:79328347-79328366 | None:intergenic | 45.0% |
| ! | CAAGCCTTATGCCACTAAGT+GGG | + | chr6.3:79329116-79329135 | MS.gene63456:intron | 45.0% |
| ! | CACGTGGCCTTTTCAACTAT+TGG | + | chr6.3:79327435-79327454 | MS.gene63456:intron | 45.0% |
| ! | CACTCTTCTTCAGATAGTGG+AGG | - | chr6.3:79330503-79330522 | None:intergenic | 45.0% |
| ! | CAGGTTTTTGAATTGGAGCC+TGG | + | chr6.3:79330134-79330153 | MS.gene63456:intron | 45.0% |
| ! | CGGGTGCAGTAGTTTTTCTT+AGG | + | chr6.3:79329533-79329552 | MS.gene63456:intron | 45.0% |
| ! | CGTTCTTTGGTTCAACCAGT+AGG | + | chr6.3:79325900-79325919 | MS.gene63456:CDS | 45.0% |
| ! | GCCATGAAAGAACGGTGTTA+GGG | - | chr6.3:79325998-79326017 | None:intergenic | 45.0% |
| ! | TAAGGGTATGCTTGGGACAT+GGG | - | chr6.3:79328346-79328365 | None:intergenic | 45.0% |
| ! | TCAGGTTGCTGGTAAAGAGA+GGG | + | chr6.3:79328564-79328583 | MS.gene63456:CDS | 45.0% |
| ! | TCGTGGCCAACTACACTTTT+AGG | + | chr6.3:79326999-79327018 | MS.gene63456:intron | 45.0% |
| ! | TGTTGGATAAGGTTGATCGC+AGG | - | chr6.3:79327483-79327502 | None:intergenic | 45.0% |
| !! | AGGTAGGGTAATGGAATCAG+GGG | - | chr6.3:79327655-79327674 | None:intergenic | 45.0% |
| !! | ATGAAGCACTGACACAGACA+CGG | + | chr6.3:79326467-79326486 | MS.gene63456:intron | 45.0% |
| !! | ATTGGACCCCTTGGATTAGT+CGG | - | chr6.3:79329605-79329624 | None:intergenic | 45.0% |
| !! | CTAGGTAGGGTAATGGAATC+AGG | - | chr6.3:79327657-79327676 | None:intergenic | 45.0% |
| !! | GCTTCTAGAACAGAAAACCC+AGG | - | chr6.3:79329062-79329081 | None:intergenic | 45.0% |
| !! | TCAGAAGTTCTTTGGGGCAA+TGG | - | chr6.3:79330287-79330306 | None:intergenic | 45.0% |
| !! | TTCAGGTTGCTGGTAAAGAG+AGG | + | chr6.3:79328563-79328582 | MS.gene63456:CDS | 45.0% |
| !! | TTTTGGAAAAGCTGAGCGAG+TGG | + | chr6.3:79328934-79328953 | MS.gene63456:CDS | 45.0% |
| !!! | GATGGCCCTTTTTTATGGGT+TGG | - | chr6.3:79329299-79329318 | None:intergenic | 45.0% |
| !!! | GGAGGAAGTACCTATCCTTT+TGG | + | chr6.3:79328917-79328936 | MS.gene63456:CDS | 45.0% |
| AAACAGCACCTCCAAGAAGC+AGG | + | chr6.3:79328723-79328742 | MS.gene63456:CDS | 50.0% | |
| AAGTGGGGTTGCCACTAAGT+GGG | + | chr6.3:79329132-79329151 | MS.gene63456:intron | 50.0% | |
| ACCGTTCTTTCATGGCGTTC+CGG | + | chr6.3:79326002-79326021 | MS.gene63456:CDS | 50.0% | |
| AGGATAGGTACTTCCTCCTC+AGG | - | chr6.3:79328915-79328934 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTAG+TGG | - | chr6.3:79329146-79329165 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGCATA+AGG | - | chr6.3:79329123-79329142 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATCCAAG+GGG | + | chr6.3:79329596-79329615 | MS.gene63456:intron | 50.0% | |
| CACTCAAGCTGCAAATGGGT+TGG | + | chr6.3:79327878-79327897 | MS.gene63456:intron | 50.0% | |
| CAGACACGGAAACCTAAACG+GGG | + | chr6.3:79326481-79326500 | MS.gene63456:intron | 50.0% | |
| CCAAGGACCGACTAATCCAA+GGG | + | chr6.3:79329595-79329614 | MS.gene63456:intron | 50.0% | |
| CCACTTAGTGGCATAAGGCT+TGG | - | chr6.3:79329118-79329137 | None:intergenic | 50.0% | |
| CGCCATGAAAGAACGGTGTT+AGG | - | chr6.3:79325999-79326018 | None:intergenic | 50.0% | |
| GACACTTCTGATCGAAAGCG+TGG | - | chr6.3:79326404-79326423 | None:intergenic | 50.0% | |
| GATAGGTACTTCCTCCTCAG+GGG | - | chr6.3:79328913-79328932 | None:intergenic | 50.0% | |
| GCATGATTGAACGCCTCATG+AGG | + | chr6.3:79328677-79328696 | MS.gene63456:CDS | 50.0% | |
| GGATAGGTACTTCCTCCTCA+GGG | - | chr6.3:79328914-79328933 | None:intergenic | 50.0% | |
| GGTAGAATTTGGTCATGGGC+AGG | + | chr6.3:79329495-79329514 | MS.gene63456:intron | 50.0% | |
| TAAGTGGGGTTGCCACTAAG+TGG | + | chr6.3:79329131-79329150 | MS.gene63456:intron | 50.0% | |
| TCCAAGGACCGACTAATCCA+AGG | + | chr6.3:79329594-79329613 | MS.gene63456:intron | 50.0% | |
| TCGCAGGCAGCTAATGAACT+AGG | - | chr6.3:79327467-79327486 | None:intergenic | 50.0% | |
| TCTGGACCTAAGCCTACTGA+GGG | + | chr6.3:79330353-79330372 | MS.gene63456:CDS | 50.0% | |
| TGTCGCACACTAGCATGTGT+AGG | + | chr6.3:79326567-79326586 | MS.gene63456:intron | 50.0% | |
| TGTGGATGGGGATACTCATG+TGG | + | chr6.3:79330232-79330251 | MS.gene63456:CDS | 50.0% | |
| TGTTGTCCCTCAGTAGGCTT+AGG | - | chr6.3:79330362-79330381 | None:intergenic | 50.0% | |
| TTAGTGGCAACCCCACTTAG+TGG | - | chr6.3:79329130-79329149 | None:intergenic | 50.0% | |
| ! | CAGGGCATCCTTGTTGGATA+AGG | - | chr6.3:79327494-79327513 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATGCCACTAAG+TGG | + | chr6.3:79329115-79329134 | MS.gene63456:intron | 50.0% |
| ! | CGTCTGATTGAAGGCATGTC+TGG | - | chr6.3:79326596-79326615 | None:intergenic | 50.0% |
| ! | TTCTGATCGAAAGCGTGGTC+AGG | - | chr6.3:79326399-79326418 | None:intergenic | 50.0% |
| !! | AAAGGGGAACTTCAGGTTGC+TGG | + | chr6.3:79328553-79328572 | MS.gene63456:CDS | 50.0% |
| !! | ACAGGCTCTGGAGTTGATTC+AGG | + | chr6.3:79328833-79328852 | MS.gene63456:intron | 50.0% |
| !! | AGTGTAAGGGCGCTTAGTCT+CGG | - | chr6.3:79328653-79328672 | None:intergenic | 50.0% |
| !! | CTTCTGATCGAAGGAGTGTC+CGG | - | chr6.3:79326843-79326862 | None:intergenic | 50.0% |
| !! | TGCTTCTTGGAGGTGCTGTT+TGG | - | chr6.3:79328724-79328743 | None:intergenic | 50.0% |
| AGTGGGGTTGCCACTAAGTG+GGG | + | chr6.3:79329133-79329152 | MS.gene63456:intron | 55.0% | |
| CTTCGCCAATGCATCCGCAT+GGG | - | chr6.3:79327589-79327608 | None:intergenic | 55.0% | |
| GACACTGACGTGTAGGACAC+CGG | + | chr6.3:79326821-79326840 | MS.gene63456:intron | 55.0% | |
| GCCGGAACGCCATGAAAGAA+CGG | - | chr6.3:79326006-79326025 | None:intergenic | 55.0% | |
| GGAAAAGCTGAGCGAGTGGA+AGG | + | chr6.3:79328938-79328957 | MS.gene63456:CDS | 55.0% | |
| GGGAACACCACAAGAGTGAG+TGG | + | chr6.3:79330441-79330460 | MS.gene63456:CDS | 55.0% | |
| GTCTGGACCTAAGCCTACTG+AGG | + | chr6.3:79330352-79330371 | MS.gene63456:CDS | 55.0% | |
| GTTCTCCCATGCGGATGCAT+TGG | + | chr6.3:79327581-79327600 | MS.gene63456:intron | 55.0% | |
| TCAATCAGACGAGTCGGTGC+TGG | + | chr6.3:79326605-79326624 | MS.gene63456:intron | 55.0% | |
| TCTTCGCCAATGCATCCGCA+TGG | - | chr6.3:79327590-79327609 | None:intergenic | 55.0% | |
| ! | GCGGATGCATTGGCGAAGAT+TGG | + | chr6.3:79327591-79327610 | MS.gene63456:intron | 55.0% |
| ! | GCTTGTGCCACTCACTCTTG+TGG | - | chr6.3:79330451-79330470 | None:intergenic | 55.0% |
| ! | GTGTAGCAGGGCATCCTTGT+TGG | - | chr6.3:79327500-79327519 | None:intergenic | 55.0% |
| !! | CCCTTGGATTAGTCGGTCCT+TGG | - | chr6.3:79329598-79329617 | None:intergenic | 55.0% |
| !! | GCACCGACTCGTCTGATTGA+AGG | - | chr6.3:79326605-79326624 | None:intergenic | 55.0% |
| !! | GTGTAAGGGCGCTTAGTCTC+GGG | - | chr6.3:79328652-79328671 | None:intergenic | 55.0% |
| !! | GTTCTTTGGGGCAATGGTGC+AGG | - | chr6.3:79330281-79330300 | None:intergenic | 55.0% |
| AATCCCACCACCCACATGCG+GGG | + | chr6.3:79329622-79329641 | MS.gene63456:intron | 60.0% | |
| CAATCCCACCACCCACATGC+GGG | + | chr6.3:79329621-79329640 | MS.gene63456:intron | 60.0% | |
| CCAATCCCACCACCCACATG+CGG | + | chr6.3:79329620-79329639 | MS.gene63456:intron | 60.0% | |
| GCTAGTGTGCGACACACACG+TGG | - | chr6.3:79326561-79326580 | None:intergenic | 60.0% | |
| GGGTTGCCACTAAGTGGGGT+TGG | + | chr6.3:79329137-79329156 | MS.gene63456:intron | 60.0% | |
| !! | GCATGGTCGGCCTTGTTAGC+TGG | + | chr6.3:79329676-79329695 | MS.gene63456:intron | 60.0% |
| !! | TCAGACGAGTCGGTGCTGGA+AGG | + | chr6.3:79326609-79326628 | MS.gene63456:intron | 60.0% |
| ATCCCACCACCCACATGCGG+GGG | + | chr6.3:79329623-79329642 | MS.gene63456:intron | 65.0% | |
| GCAGCAGCGCGTACCCTCAA+TGG | - | chr6.3:79328891-79328910 | None:intergenic | 65.0% | |
| !! | CCGCATGTGGGTGGTGGGAT+TGG | - | chr6.3:79329623-79329642 | None:intergenic | 65.0% |
| !! | GGTGGTGGGATTGGACCCCT+TGG | - | chr6.3:79329614-79329633 | None:intergenic | 65.0% |
| AACCCCCACCCCCCGCATGT+GGG | - | chr6.3:79329635-79329654 | None:intergenic | 70.0% | |
| ACCACCCACATGCGGGGGGT+GGG | + | chr6.3:79329628-79329647 | MS.gene63456:intron | 70.0% | |
| ACCCCCCGCATGTGGGTGGT+GGG | - | chr6.3:79329628-79329647 | None:intergenic | 70.0% | |
| TCCCACCACCCACATGCGGG+GGG | + | chr6.3:79329624-79329643 | MS.gene63456:intron | 70.0% | |
| ACGCGCTGCTGCCCCTGAGG+AGG | + | chr6.3:79328899-79328918 | MS.gene63456:CDS | 75.0% | |
| CAACCCCCACCCCCCGCATG+TGG | - | chr6.3:79329636-79329655 | None:intergenic | 75.0% | |
| CACCACCCACATGCGGGGGG+TGG | + | chr6.3:79329627-79329646 | MS.gene63456:intron | 75.0% | |
| CACCCACATGCGGGGGGTGG+GGG | + | chr6.3:79329630-79329649 | MS.gene63456:intron | 75.0% | |
| CACCCCCCGCATGTGGGTGG+TGG | - | chr6.3:79329629-79329648 | None:intergenic | 75.0% | |
| CCACCCACATGCGGGGGGTG+GGG | + | chr6.3:79329629-79329648 | MS.gene63456:intron | 75.0% | |
| GGTACGCGCTGCTGCCCCTG+AGG | + | chr6.3:79328896-79328915 | MS.gene63456:CDS | 75.0% | |
| ! | CCCCACCCCCCGCATGTGGG+TGG | - | chr6.3:79329632-79329651 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 79325894 | 79330580 | 79325894 | ID=MS.gene63456 |
| chr6.3 | mRNA | 79325894 | 79330580 | 79325894 | ID=MS.gene63456.t1;Parent=MS.gene63456 |
| chr6.3 | exon | 79325894 | 79326027 | 79325894 | ID=MS.gene63456.t1.exon1;Parent=MS.gene63456.t1 |
| chr6.3 | CDS | 79325894 | 79326027 | 79325894 | ID=cds.MS.gene63456.t1;Parent=MS.gene63456.t1 |
| chr6.3 | exon | 79326111 | 79326240 | 79326111 | ID=MS.gene63456.t1.exon2;Parent=MS.gene63456.t1 |
| chr6.3 | CDS | 79326111 | 79326240 | 79326111 | ID=cds.MS.gene63456.t1;Parent=MS.gene63456.t1 |
| chr6.3 | exon | 79328544 | 79328744 | 79328544 | ID=MS.gene63456.t1.exon3;Parent=MS.gene63456.t1 |
| chr6.3 | CDS | 79328544 | 79328744 | 79328544 | ID=cds.MS.gene63456.t1;Parent=MS.gene63456.t1 |
| chr6.3 | exon | 79328837 | 79329004 | 79328837 | ID=MS.gene63456.t1.exon4;Parent=MS.gene63456.t1 |
| chr6.3 | CDS | 79328837 | 79329004 | 79328837 | ID=cds.MS.gene63456.t1;Parent=MS.gene63456.t1 |
| chr6.3 | exon | 79330137 | 79330580 | 79330137 | ID=MS.gene63456.t1.exon5;Parent=MS.gene63456.t1 |
| chr6.3 | CDS | 79330137 | 79330580 | 79330137 | ID=cds.MS.gene63456.t1;Parent=MS.gene63456.t1 |
| Gene Sequence |
| Protein sequence |
