AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052728

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052728.t1 MTR_8g018420 91.027 847 17 2 1 788 10 856 0.0 1561
MS.gene052728.t1 MTR_2g099570 69.811 848 195 4 1 788 15 861 0.0 1224
MS.gene052728.t1 MTR_8g018570 65.344 857 227 6 1 788 15 870 0.0 1142
MS.gene052728.t1 MTR_2g099560 64.906 852 232 5 1 788 15 863 0.0 1136
MS.gene052728.t1 MTR_8g018550 65.457 854 229 4 1 788 15 868 0.0 1122
MS.gene052728.t1 MTR_8g020990 63.466 854 246 4 1 788 15 868 0.0 1116
MS.gene052728.t1 MTR_5g024020 63.753 858 238 8 1 788 13 867 0.0 1115
MS.gene052728.t1 MTR_8g018730 63.827 857 238 7 1 788 11 864 0.0 1115
MS.gene052728.t1 MTR_8g018735 64.144 859 232 8 1 788 12 865 0.0 1110
MS.gene052728.t1 MTR_8g018520 63.349 854 247 4 1 788 15 868 0.0 1102
MS.gene052728.t1 MTR_8g018430 61.810 851 261 4 1 788 12 861 0.0 1097
MS.gene052728.t1 MTR_8g018690 62.150 856 251 4 1 788 15 865 0.0 1093
MS.gene052728.t1 MTR_8g018510 62.033 856 256 6 1 788 15 869 0.0 1090
MS.gene052728.t1 MTR_8g018730 61.215 856 232 7 1 788 11 834 0.0 1055
MS.gene052728.t1 MTR_8g018690 60.164 856 248 5 1 788 15 845 0.0 1046
MS.gene052728.t1 MTR_5g024020 60.839 858 227 9 1 788 13 831 0.0 1045
MS.gene052728.t1 MTR_3g081130 59.390 852 278 7 1 788 11 858 0.0 1029
MS.gene052728.t1 MTR_8g018450 58.665 854 250 10 1 788 12 828 0.0 993
MS.gene052728.t1 MTR_1g083020 58.556 859 266 10 1 788 19 858 0.0 993
MS.gene052728.t1 MTR_3g081130 60.456 789 247 6 61 788 2 786 0.0 982
MS.gene052728.t1 MTR_7g113410 55.465 860 295 10 1 788 24 867 0.0 958
MS.gene052728.t1 MTR_1g104650 53.349 866 308 12 1 788 9 856 0.0 909
MS.gene052728.t1 MTR_8g018650 52.230 852 289 11 1 788 10 807 0.0 863
MS.gene052728.t1 MTR_8g018620 52.052 853 289 13 1 788 10 807 0.0 860
MS.gene052728.t1 MTR_8g018735 68.092 608 178 5 1 596 12 615 0.0 846
MS.gene052728.t1 MTR_8g018590 53.285 822 280 11 41 788 32 823 0.0 843
MS.gene052728.t1 MTR_8g018730 65.700 586 139 5 263 788 1 584 0.0 777
MS.gene052728.t1 MTR_8g020970 43.645 834 394 13 23 787 100 926 0.0 665
MS.gene052728.t1 MTR_4g066170 42.061 825 390 18 36 788 98 906 0.0 612
MS.gene052728.t1 MTR_3g479460 40.431 836 401 17 30 788 88 903 0.0 592
MS.gene052728.t1 MTR_8g080230 40.727 825 393 18 43 788 109 916 0.0 586
MS.gene052728.t1 MTR_3g079450 40.476 840 395 20 30 788 87 902 0.0 576
MS.gene052728.t1 MTR_4g088810 39.051 822 399 15 39 787 102 894 0.0 570
MS.gene052728.t1 MTR_8g011340 39.428 804 383 18 32 749 43 828 0.0 566
MS.gene052728.t1 MTR_3g079420 39.401 835 417 16 24 788 50 865 1.53e-179 537
MS.gene052728.t1 MTR_8g020970 45.719 584 300 11 23 596 100 676 1.02e-160 482
MS.gene052728.t1 MTR_8g021020 58.168 404 106 3 448 788 28 431 2.43e-160 472
MS.gene052728.t1 MTR_3g079450 42.589 587 294 17 30 596 87 650 1.07e-136 419
MS.gene052728.t1 MTR_6g452500 35.831 614 296 15 236 771 12 605 9.89e-122 379
MS.gene052728.t1 MTR_7g012030 58.974 117 47 1 501 616 87 203 1.06e-39 146
MS.gene052728.t1 MTR_6g046330 51.852 135 52 3 501 622 77 211 1.81e-34 134
MS.gene052728.t1 MTR_8g463810 31.034 232 88 7 387 617 182 342 1.15e-22 101
MS.gene052728.t1 MTR_5g023990 35.000 180 51 6 610 783 128 247 2.01e-21 96.3
MS.gene052728.t1 MTR_4g088805 40.000 90 54 0 698 787 2 91 6.25e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052728.t1 AT1G55020 56.228 859 285 11 1 788 21 859 0.0 956
MS.gene052728.t1 AT3G22400 51.382 868 326 12 1 788 35 886 0.0 889
MS.gene052728.t1 AT1G72520 41.900 821 401 12 36 788 114 926 0.0 643
MS.gene052728.t1 AT1G17420 41.727 822 400 14 36 788 108 919 0.0 640
MS.gene052728.t1 AT3G45140 41.858 829 379 19 36 788 95 896 0.0 605
MS.gene052728.t1 AT3G45140 43.490 768 341 17 97 788 4 754 0.0 592
MS.gene052728.t1 AT1G67560 39.953 846 409 19 23 788 91 917 0.0 580

Find 158 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCAGACTTTCTTGTTTA+TGG 0.018570 8.3:+72173977 MS.gene052728:CDS
TGATACACTTACTTCCTTTC+TGG 0.051977 8.3:+72172630 MS.gene052728:CDS
CTTCATGCAGCTGTTAATTT+TGG 0.086777 8.3:+72176400 MS.gene052728:CDS
AATATCTTCAAAAGTTTATA+AGG 0.223035 8.3:+72175828 MS.gene052728:CDS
TGATGGAACTTTAAAGTCTT+TGG 0.226575 8.3:+72175256 MS.gene052728:CDS
AAACTACGCTCGTCCAGTTT+TGG 0.260679 8.3:+72173680 MS.gene052728:CDS
TTAATTAGCTCTACTAAAAC+TGG 0.280752 8.3:+72172673 MS.gene052728:CDS
TTCATCTGATGTGAAGTATA+TGG 0.280760 8.3:-72176224 None:intergenic
GGTATACCTTGAATTACTTT+AGG 0.291611 8.3:-72174214 None:intergenic
AGCAAGTGCATTTATATTCA+TGG 0.295232 8.3:-72175737 None:intergenic
AAGTGAATGGTTCCAACATT+TGG 0.295365 8.3:-72173028 None:intergenic
CTTCAAAAGTTTATAAGGAT+TGG 0.319001 8.3:+72175833 MS.gene052728:CDS
GTTAAGCTCTATGTGCTCTT+TGG 0.319451 8.3:-72174990 None:intergenic
GATACACTTACTTCCTTTCT+GGG 0.321649 8.3:+72172631 MS.gene052728:CDS
ATTCCAAGAGATGAAGCTTT+TGG 0.325051 8.3:+72173944 MS.gene052728:CDS
ATAGATTGCTCTTACATTGT+TGG 0.326610 8.3:-72173110 None:intergenic
GATAGCAACTTTGGAATTCC+TGG 0.326663 8.3:+72172938 MS.gene052728:CDS
TTTGAATATGATAGCAACTT+TGG 0.330629 8.3:+72172929 MS.gene052728:CDS
CAACTTCTTTCCACCAAGAT+TGG 0.333148 8.3:-72176270 None:intergenic
ACACAATAATTCCATATCTA+AGG 0.334272 8.3:+72175174 MS.gene052728:CDS
ATAGCAGCCTTCAAGAAGTT+TGG 0.347221 8.3:+72176776 MS.gene052728:CDS
CGGTCTTCGACTAGTGATAA+AGG 0.347387 8.3:+72176130 MS.gene052728:CDS
TTATGATGTTTACAATGATT+TGG 0.350830 8.3:+72173638 MS.gene052728:CDS
AGTGAATGGTTCCAACATTT+GGG 0.361135 8.3:-72173027 None:intergenic
TATGATGTTTACAATGATTT+GGG 0.361274 8.3:+72173639 MS.gene052728:CDS
CTGCTAGATCCTCCCAAAAC+TGG 0.365050 8.3:-72173693 None:intergenic
TGGATGACTGATGAAGAATT+TGG 0.366017 8.3:+72174448 MS.gene052728:CDS
TTCAAAAGTTTATAAGGATT+GGG 0.366464 8.3:+72175834 MS.gene052728:CDS
GAGCTCCTGCTCTCAGTGTT+AGG 0.378311 8.3:-72173911 None:intergenic
GCACATAGAGCTTAACTTAG+AGG 0.378467 8.3:+72174997 MS.gene052728:CDS
TTAGAGTTGAAGACTTTAAG+AGG 0.380397 8.3:+72173573 MS.gene052728:CDS
GAGTTTATTAGCCTTAGATA+TGG 0.386116 8.3:-72175185 None:intergenic
GCTTCAACACCTTCAATTGC+AGG 0.390029 8.3:-72175344 None:intergenic
TCAAGTCCATCAACAGCATA+AGG 0.396546 8.3:-72176158 None:intergenic
CCTACACCTAAAGTAATTCA+AGG 0.399993 8.3:+72174208 MS.gene052728:CDS
CGAAGAAAATACGATCAGTT+TGG 0.407190 8.3:-72173087 None:intergenic
AAGTTTGCAGTATTATCATA+TGG 0.408690 8.3:+72176365 MS.gene052728:CDS
TGGCCAAAAGCTTCATCTCT+TGG 0.411227 8.3:-72173947 None:intergenic
TTCACTTTGTTTGCAACTCG+TGG 0.411449 8.3:+72173044 MS.gene052728:CDS
TTTGGAAGAGAGATTCTTGC+TGG 0.414045 8.3:+72174466 MS.gene052728:CDS
TCAAAGCTATCAAATTCATT+TGG 0.414285 8.3:-72174064 None:intergenic
GCAAGTCCTTCCTCACTTGA+AGG 0.420366 8.3:-72176902 None:intergenic
ATTAACAATTTGCCAACATT+GGG 0.424393 8.3:+72172878 MS.gene052728:CDS
GTCTACTTGCCTGCAATTGA+AGG 0.425065 8.3:+72175335 MS.gene052728:CDS
TCAAATACAGATTGTATCAA+TGG 0.425244 8.3:-72174028 None:intergenic
TAAGATCAGCAGGGAGGGCT+TGG 0.426671 8.3:-72175867 None:intergenic
AAGCTAGATAGTGCAGTCTA+TGG 0.426953 8.3:+72174947 MS.gene052728:CDS
CTGTTCGTTGCTATGACAAA+TGG 0.429152 8.3:-72175658 None:intergenic
GGCAGAAAACCAACTGCAAC+AGG 0.431036 8.3:+72173744 MS.gene052728:CDS
GTTCTTCCCCTCCGAGGATA+AGG 0.431519 8.3:-72173720 None:intergenic
GATGGAGCGTTAGACGGGTT+TGG 0.433250 8.3:+72172598 MS.gene052728:CDS
GGATGCAATAGTTTGTAAAT+AGG 0.441730 8.3:-72175700 None:intergenic
TGATTTGGGTGACCCCGATA+AGG 0.454794 8.3:+72173653 MS.gene052728:CDS
AAAAGAAGCTTATTTAAAAG+AGG 0.461638 8.3:+72172853 MS.gene052728:CDS
AATTAACAATTTGCCAACAT+TGG 0.462154 8.3:+72172877 MS.gene052728:CDS
TTTAATATGAAACCTCCATA+TGG 0.462246 8.3:-72176430 None:intergenic
GATTTGGGTGACCCCGATAA+GGG 0.463228 8.3:+72173654 MS.gene052728:CDS
CTCTTAGATTGAGATACTGT+TGG 0.463826 8.3:-72176939 None:intergenic
ACTTTAAGAGGAGATGGAAC+GGG 0.464165 8.3:+72173585 MS.gene052728:CDS
TTATCGATGGAGCGTTAGAC+GGG 0.467411 8.3:+72172593 MS.gene052728:CDS
TTGAAGACTTTAAGAGGAGA+TGG 0.467418 8.3:+72173579 MS.gene052728:CDS
AAACTTCTTGAAGGCTGCTA+TGG 0.475554 8.3:-72176774 None:intergenic
GTAACCGGGGAAGGGAAACT+TGG 0.477053 8.3:+72172830 MS.gene052728:intron
GCGGATTCAACTTCCCCTTA+CGG 0.477226 8.3:+72176110 MS.gene052728:CDS
TACTGTTTGGCTACTTGCCA+AGG 0.479396 8.3:+72175367 MS.gene052728:CDS
AGGGTATAAGGCATGCTAAC+CGG 0.479434 8.3:-72176872 None:intergenic
AGGACTCTGAACTCCAATCT+TGG 0.479531 8.3:+72176257 MS.gene052728:CDS
TCAGAAATCTTTAGAACTGA+TGG 0.485324 8.3:+72174166 MS.gene052728:CDS
ATTCTTGCTGGTGTAAATCC+TGG 0.486124 8.3:+72174478 MS.gene052728:CDS
CTATAGTAGACAAGTGGAGC+AGG 0.496255 8.3:-72173546 None:intergenic
TATCCTCGGAGGGGAAGAAC+GGG 0.496299 8.3:+72173723 MS.gene052728:CDS
TATTGAAAAGACATTCTTGT+GGG 0.498429 8.3:+72175789 MS.gene052728:CDS
ATTTCTGATAACACTGGTAA+AGG 0.499377 8.3:-72174151 None:intergenic
CAAGTCCATCAACAGCATAA+GGG 0.500964 8.3:-72176157 None:intergenic
TCTTAGATTGAGATACTGTT+GGG 0.502515 8.3:-72176938 None:intergenic
CATCCTCAAGGAGATCAATT+CGG 0.504730 8.3:+72175299 MS.gene052728:CDS
AATTGATCTCCTTGAGGATG+TGG 0.505930 8.3:-72175296 None:intergenic
AATGCCATCTGCATTGACTA+AGG 0.506196 8.3:-72175767 None:intergenic
AAAGAGACAGTGCTGAGTAT+TGG 0.506777 8.3:+72176735 MS.gene052728:CDS
ATCACTAGTCGAAGACCGTA+AGG 0.510541 8.3:-72176125 None:intergenic
CCTTGAATTACTTTAGGTGT+AGG 0.510768 8.3:-72174208 None:intergenic
TTCACCAACTTGTCAGCCAC+TGG 0.513084 8.3:+72175417 MS.gene052728:CDS
CTTGATGATATCCCAAATGT+TGG 0.515799 8.3:+72173016 MS.gene052728:CDS
ATTATCGATGGAGCGTTAGA+CGG 0.520039 8.3:+72172592 MS.gene052728:CDS
AATCATTGAGAAACCGAGTT+GGG 0.520370 8.3:+72176849 MS.gene052728:CDS
ATTGAGAAACCGAGTTGGGC+CGG 0.524805 8.3:+72176853 MS.gene052728:CDS
GTTTGTTTATCTCCCAATGT+TGG 0.526703 8.3:-72172890 None:intergenic
AAGGATGGTTCTTGAAGCAT+AGG 0.529557 8.3:-72175222 None:intergenic
GACTTTAAGAGGAGATGGAA+CGG 0.531242 8.3:+72173584 MS.gene052728:CDS
AAGGTGTTGAAGCTACTGTT+TGG 0.533014 8.3:+72175354 MS.gene052728:CDS
GTTTACTATAACATAAGCCT+TGG 0.534747 8.3:-72175384 None:intergenic
AAAAGACATTCTTGTGGGGA+GGG 0.536208 8.3:+72175794 MS.gene052728:CDS
TGGAGGCTGCGAATTAAGCC+AGG 0.537129 8.3:-72174496 None:intergenic
CGAGTTGCAAACAAAGTGAA+TGG 0.537419 8.3:-72173041 None:intergenic
CAGCCTTCCTTATCCTCGGA+GGG 0.541078 8.3:+72173713 MS.gene052728:CDS
ATGTGGAAGACTTAGCTCAA+TGG 0.546020 8.3:-72175279 None:intergenic
CACATAGAGCTTAACTTAGA+GGG 0.548086 8.3:+72174998 MS.gene052728:CDS
CATCAAGAGTCAAGCTCACA+AGG 0.548278 8.3:-72173000 None:intergenic
TCCCTGCTGATCTTATCAAA+AGG 0.550271 8.3:+72175875 MS.gene052728:CDS
GCTTCTGATGAATACTACCT+TGG 0.552082 8.3:+72176710 MS.gene052728:CDS
ACTCTGAACTCCAATCTTGG+TGG 0.554147 8.3:+72176260 MS.gene052728:CDS
TCACTTTGTTTGCAACTCGT+GGG 0.557813 8.3:+72173045 MS.gene052728:CDS
CTTTAGGTGTAGGAAACTTG+AGG 0.557822 8.3:-72174198 None:intergenic
CTAGCAGCCTTCCTTATCCT+CGG 0.559047 8.3:+72173709 MS.gene052728:CDS
TTTACCAGTGGCTGACAAGT+TGG 0.560303 8.3:-72175421 None:intergenic
GAAAAGACATTCTTGTGGGG+AGG 0.560508 8.3:+72175793 MS.gene052728:CDS
TTTGGGAATGATAAGATCAA+AGG 0.560979 8.3:+72172508 None:intergenic
AAAACTCTAGCTGAAATTGA+GGG 0.561915 8.3:+72176800 MS.gene052728:CDS
TTATCCTCGGAGGGGAAGAA+CGG 0.564433 8.3:+72173722 MS.gene052728:CDS
GTTGATGCAAAAGAATGTCT+TGG 0.565743 8.3:+72172540 MS.gene052728:CDS
TTTGATAAGATCAGCAGGGA+GGG 0.567663 8.3:-72175872 None:intergenic
ACAAATCGATCGACCCAGAA+AGG 0.570019 8.3:-72172644 None:intergenic
ATAGTCTAACCTGTTGCAGT+TGG 0.577720 8.3:-72173753 None:intergenic
CTAAAGATTTCTGATAACAC+TGG 0.584076 8.3:-72174157 None:intergenic
CACTAGTCGAAGACCGTAAG+GGG 0.584127 8.3:-72176123 None:intergenic
TGGAAAGAAGTTGTAGAAGT+GGG 0.584179 8.3:+72176280 MS.gene052728:CDS
CAGCACTGTCTCTTTGTCCA+AGG 0.589596 8.3:-72176727 None:intergenic
GTGGAAAGAAGTTGTAGAAG+TGG 0.591624 8.3:+72176279 MS.gene052728:CDS
ATTTAGGGGAATAGCAGTTG+CGG 0.591769 8.3:+72176091 MS.gene052728:intron
TTTGGGCAATATCCATATGG+AGG 0.593205 8.3:+72176418 MS.gene052728:CDS
TGATAAGATCAAAGGCACCT+TGG 0.595048 8.3:+72172516 None:intergenic
GCATGCTAACCGGCCCAACT+CGG 0.596322 8.3:-72176862 None:intergenic
CTTTAAGAGGAGATGGAACG+GGG 0.596358 8.3:+72173586 MS.gene052728:CDS
CTAAGTCTTCCACATCCTCA+AGG 0.600779 8.3:+72175287 MS.gene052728:CDS
TTCATGGTATCGCGATAATG+TGG 0.601143 8.3:-72175721 None:intergenic
AATTGTCTATAGTAGACAAG+TGG 0.603348 8.3:-72173552 None:intergenic
TTATTGAAAAGACATTCTTG+TGG 0.603556 8.3:+72175788 MS.gene052728:CDS
AGTGGAGCAGGTGTTTCACT+TGG 0.604250 8.3:-72173534 None:intergenic
TTGAGGGACAACTCATTCTG+AGG 0.606673 8.3:+72176816 MS.gene052728:CDS
TCCATAAACAAGAAAGTCTG+AGG 0.610132 8.3:-72173978 None:intergenic
TCATCCTTAGTCAATGCAGA+TGG 0.613787 8.3:+72175763 MS.gene052728:CDS
GATATGGAATTATTGTGTCA+TGG 0.613887 8.3:-72175169 None:intergenic
GAATCATTGAGAAACCGAGT+TGG 0.615616 8.3:+72176848 MS.gene052728:CDS
GATCCTACGAAGATTATCGA+TGG 0.617689 8.3:+72172580 MS.gene052728:CDS
GATGTGCTTGATCTATATGA+AGG 0.617798 8.3:+72174088 MS.gene052728:CDS
GAAGTTGTAGAAGTGGGTCA+TGG 0.620662 8.3:+72176286 MS.gene052728:CDS
ATTTGACTAAGTATATCTGT+TGG 0.622500 8.3:-72174124 None:intergenic
CTTGTGGGGAGGGTATGCTA+TGG 0.623212 8.3:+72175804 MS.gene052728:CDS
CAGATCCTAACACTGAGAGC+AGG 0.624210 8.3:+72173906 MS.gene052728:intron
CTGCCCGTTCTTCCCCTCCG+AGG 0.625041 8.3:-72173726 None:intergenic
AGAGGGTCTCACTGTTGATG+AGG 0.625299 8.3:+72175015 MS.gene052728:CDS
GAGTAGTGAGTAAGTCTGCA+TGG 0.629429 8.3:+72174428 MS.gene052728:intron
TCACTAGTCGAAGACCGTAA+GGG 0.632511 8.3:-72176124 None:intergenic
GTGACAAGAAAGACGAGCCA+TGG 0.634560 8.3:+72176308 MS.gene052728:CDS
AACAGCTGCATGAAGAGCTG+AGG 0.641558 8.3:-72176392 None:intergenic
GCAGCCTTCCTTATCCTCGG+AGG 0.644619 8.3:+72173712 MS.gene052728:CDS
GCTCCATCGATAATCTTCGT+AGG 0.647610 8.3:-72172583 None:intergenic
ATTGAAAAGACATTCTTGTG+GGG 0.649770 8.3:+72175790 MS.gene052728:CDS
TTCCCCTCCGAGGATAAGGA+AGG 0.650502 8.3:-72173716 None:intergenic
AGCCTTCCTTATCCTCGGAG+GGG 0.652807 8.3:+72173714 MS.gene052728:CDS
CAGTCATAGAAATCTTGTCA+AGG 0.657010 8.3:+72176684 MS.gene052728:intron
TAATTAGCTCTACTAAAACT+GGG 0.666859 8.3:+72172674 MS.gene052728:CDS
GAAAGTCTGAGGATTTCAAG+TGG 0.682645 8.3:-72173967 None:intergenic
ACAAGAAAGACGAGCCATGG+TGG 0.683058 8.3:+72176311 MS.gene052728:CDS
ACACCGAATTGATCTCCTTG+AGG 0.687282 8.3:-72175302 None:intergenic
GTGCTTGATCTATATGAAGG+AGG 0.701156 8.3:+72174091 MS.gene052728:CDS
TTTAAGAGGAGATGGAACGG+GGG 0.717332 8.3:+72173587 MS.gene052728:CDS
CAAGAGTCAAGCTCACAAGG+AGG 0.745830 8.3:-72172997 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATATTTATTTGTTTAATA+AGG - chr8.3:72173301-72173320 None:intergenic 10.0%
!! TATATTTAAATACTATTATG+TGG - chr8.3:72173140-72173159 None:intergenic 10.0%
!!! TAACTTTAAGTTTTAATTTA+TGG + chr8.3:72172797-72172816 MS.gene052728:intron 10.0%
!! AATATCTTCAAAAGTTTATA+AGG + chr8.3:72175828-72175847 MS.gene052728:CDS 15.0%
!! AATCAATAAATACTAATAGA+TGG + chr8.3:72175464-72175483 MS.gene052728:intron 15.0%
!! ACCAATAATAAAAATCTTAA+AGG + chr8.3:72173412-72173431 MS.gene052728:intron 15.0%
!! CATACTAAATAAATCAAATT+TGG - chr8.3:72175070-72175089 None:intergenic 15.0%
!!! AAAAGTATATGAAGATTTTA+TGG + chr8.3:72174387-72174406 MS.gene052728:intron 15.0%
!!! ATATTTTTAGTCTCTTTTTA+AGG - chr8.3:72174698-72174717 None:intergenic 15.0%
!!! CAAATTTGATTTATTTAGTA+TGG + chr8.3:72175068-72175087 MS.gene052728:intron 15.0%
!! AAAAGAAGCTTATTTAAAAG+AGG + chr8.3:72172853-72172872 MS.gene052728:CDS 20.0%
!! AAGAATGATGTTTAACAATT+AGG - chr8.3:72174884-72174903 None:intergenic 20.0%
!! AGAATGATGTTTAACAATTA+GGG - chr8.3:72174883-72174902 None:intergenic 20.0%
!! TATGATGTTTACAATGATTT+GGG + chr8.3:72173639-72173658 MS.gene052728:CDS 20.0%
!! TGTTCAAAAAATTAATCACT+TGG - chr8.3:72175113-72175132 None:intergenic 20.0%
!! TTATGATGTTTACAATGATT+TGG + chr8.3:72173638-72173657 MS.gene052728:CDS 20.0%
!! TTCAAAAGTTTATAAGGATT+GGG + chr8.3:72175834-72175853 MS.gene052728:CDS 20.0%
!! TTTGCATATCAATAGAAAAT+TGG + chr8.3:72174730-72174749 MS.gene052728:intron 20.0%
!!! AAGTGATTAATTTTTTGAAC+AGG + chr8.3:72175112-72175131 MS.gene052728:intron 20.0%
!!! ATAAGTGGATATTTTTCAAA+AGG - chr8.3:72174254-72174273 None:intergenic 20.0%
!!! CACAATATATCAATTTTCTA+TGG - chr8.3:72174620-72174639 None:intergenic 20.0%
!!! CGATAGTTTTTTATAGTTAA+AGG + chr8.3:72175993-72176012 MS.gene052728:intron 20.0%
!!! GCCTTTAAGATTTTTATTAT+TGG - chr8.3:72173416-72173435 None:intergenic 20.0%
!!! TGAATGATCATGATTTTATA+AGG + chr8.3:72176025-72176044 MS.gene052728:intron 20.0%
!!! TGATTTTCCAAAATAATTAC+AGG + chr8.3:72174907-72174926 MS.gene052728:intron 20.0%
! AACAACATTGAAAGTTGAAA+GGG - chr8.3:72173442-72173461 None:intergenic 25.0%
! AAGTTTGCAGTATTATCATA+TGG + chr8.3:72176365-72176384 MS.gene052728:CDS 25.0%
! AATTAACAATTTGCCAACAT+TGG + chr8.3:72172877-72172896 MS.gene052728:CDS 25.0%
! ACACAATAATTCCATATCTA+AGG + chr8.3:72175174-72175193 MS.gene052728:CDS 25.0%
! ACCAAATTTGGATAGAAAAT+TGG + chr8.3:72174768-72174787 MS.gene052728:intron 25.0%
! ATTAACAATTTGCCAACATT+GGG + chr8.3:72172878-72172897 MS.gene052728:CDS 25.0%
! ATTTAGTGACATAATTAGAG+AGG + chr8.3:72175554-72175573 MS.gene052728:intron 25.0%
! ATTTGACTAAGTATATCTGT+TGG - chr8.3:72174127-72174146 None:intergenic 25.0%
! CAAAAGGTAGGATATAATAA+TGG - chr8.3:72174238-72174257 None:intergenic 25.0%
! CAGAAACTAAAAACCAAATT+TGG + chr8.3:72174756-72174775 MS.gene052728:intron 25.0%
! CTCGAGATAATTATACTTAT+AGG + chr8.3:72174812-72174831 MS.gene052728:intron 25.0%
! CTTCAAAAGTTTATAAGGAT+TGG + chr8.3:72175833-72175852 MS.gene052728:CDS 25.0%
! TAACAACATTGAAAGTTGAA+AGG - chr8.3:72173443-72173462 None:intergenic 25.0%
! TACTAAAGAGAGAAAGAAAA+AGG - chr8.3:72173802-72173821 None:intergenic 25.0%
! TACTCATAGTCAATTTAGAT+AGG - chr8.3:72175596-72175615 None:intergenic 25.0%
! TATTGAAAAGACATTCTTGT+GGG + chr8.3:72175789-72175808 MS.gene052728:CDS 25.0%
! TCAAAGCTATCAAATTCATT+TGG - chr8.3:72174067-72174086 None:intergenic 25.0%
! TCAAATACAGATTGTATCAA+TGG - chr8.3:72174031-72174050 None:intergenic 25.0%
! TCAAATATGTTACATATTGC+AGG + chr8.3:72176572-72176591 MS.gene052728:intron 25.0%
! TTATTGAAAAGACATTCTTG+TGG + chr8.3:72175788-72175807 MS.gene052728:CDS 25.0%
! TTTAATATGAAACCTCCATA+TGG - chr8.3:72176433-72176452 None:intergenic 25.0%
! TTTGAATATGATAGCAACTT+TGG + chr8.3:72172929-72172948 MS.gene052728:CDS 25.0%
!! ATTGTGCTCTTGTTTATTTA+GGG + chr8.3:72176076-72176095 MS.gene052728:intron 25.0%
!! GGAAATTCCTGTAATTATTT+TGG - chr8.3:72174917-72174936 None:intergenic 25.0%
!! GTCACTAAATTTTACAACAA+AGG - chr8.3:72175544-72175563 None:intergenic 25.0%
!! TATTGTGCTCTTGTTTATTT+AGG + chr8.3:72176075-72176094 MS.gene052728:intron 25.0%
!! TCCAATTTTCTATCCAAATT+TGG - chr8.3:72174772-72174791 None:intergenic 25.0%
!! TTGACTATGAGTAATTTTGA+TGG + chr8.3:72175603-72175622 MS.gene052728:intron 25.0%
!! TTTTAGTAGAGCTAATTAAC+TGG - chr8.3:72172672-72172691 None:intergenic 25.0%
!!! AAAGTGTCATTTGAAAAACT+TGG - chr8.3:72174351-72174370 None:intergenic 25.0%
!!! TAAATTAATTTGTACCGAGA+TGG - chr8.3:72172766-72172785 None:intergenic 25.0%
!!! TAATTAGCTCTACTAAAACT+GGG + chr8.3:72172674-72172693 MS.gene052728:CDS 25.0%
!!! TATGGATATTTTTCAGTAAC+CGG + chr8.3:72172815-72172834 MS.gene052728:intron 25.0%
!!! TTAATTAGCTCTACTAAAAC+TGG + chr8.3:72172673-72172692 MS.gene052728:CDS 25.0%
AAAAACTCTAGCTGAAATTG+AGG + chr8.3:72176799-72176818 MS.gene052728:CDS 30.0%
AAAACTCTAGCTGAAATTGA+GGG + chr8.3:72176800-72176819 MS.gene052728:CDS 30.0%
AATTGTCTATAGTAGACAAG+TGG - chr8.3:72173555-72173574 None:intergenic 30.0%
ACTTGGTCAATTCTATTCAT+TGG - chr8.3:72175096-72175115 None:intergenic 30.0%
AGACAAATTATTCTCCATCT+CGG + chr8.3:72172749-72172768 MS.gene052728:intron 30.0%
AGCAAGTGCATTTATATTCA+TGG - chr8.3:72175740-72175759 None:intergenic 30.0%
ATAGATTGCTCTTACATTGT+TGG - chr8.3:72173113-72173132 None:intergenic 30.0%
ATCAGATGAAAAAATTCAGC+AGG + chr8.3:72176237-72176256 MS.gene052728:CDS 30.0%
ATGAACATGTTAAGCTTACT+TGG - chr8.3:72174519-72174538 None:intergenic 30.0%
ATTGAAAAGACATTCTTGTG+GGG + chr8.3:72175790-72175809 MS.gene052728:CDS 30.0%
ATTTCTGATAACACTGGTAA+AGG - chr8.3:72174154-72174173 None:intergenic 30.0%
ATTTGATGTTACACACTTCA+AGG - chr8.3:72173487-72173506 None:intergenic 30.0%
CTAAAGATTTCTGATAACAC+TGG - chr8.3:72174160-72174179 None:intergenic 30.0%
GATATGGAATTATTGTGTCA+TGG - chr8.3:72175172-72175191 None:intergenic 30.0%
GGTATACCTTGAATTACTTT+AGG - chr8.3:72174217-72174236 None:intergenic 30.0%
GTTTACTATAACATAAGCCT+TGG - chr8.3:72175387-72175406 None:intergenic 30.0%
TACAACAAAGGAATTAGAGA+GGG - chr8.3:72175532-72175551 None:intergenic 30.0%
TATAGTGACCAACATAGTTA+GGG - chr8.3:72175973-72175992 None:intergenic 30.0%
TTACAACAAAGGAATTAGAG+AGG - chr8.3:72175533-72175552 None:intergenic 30.0%
TTAGAGTTGAAGACTTTAAG+AGG + chr8.3:72173573-72173592 MS.gene052728:CDS 30.0%
TTCATCTGATGTGAAGTATA+TGG - chr8.3:72176227-72176246 None:intergenic 30.0%
! AATTTTGGGCAATATCCATA+TGG + chr8.3:72176415-72176434 MS.gene052728:CDS 30.0%
! AGTTTTTCCAAACTTCTTGA+AGG - chr8.3:72176786-72176805 None:intergenic 30.0%
! ATCCTTTTCTTGAAAAGTGA+TGG + chr8.3:72175239-72175258 MS.gene052728:CDS 30.0%
! CAAGAGCACAATAATTATAC+TGG - chr8.3:72176068-72176087 None:intergenic 30.0%
! GGATGCAATAGTTTGTAAAT+AGG - chr8.3:72175703-72175722 None:intergenic 30.0%
! TCAATCAGAGTTTGAAACTT+TGG - chr8.3:72176659-72176678 None:intergenic 30.0%
! TTCATGCAGCTGTTAATTTT+GGG + chr8.3:72176401-72176420 MS.gene052728:CDS 30.0%
! TTCTTAATTTTGAATGCTCC+AGG - chr8.3:72172959-72172978 None:intergenic 30.0%
! TTGTGCTCTTGTTTATTTAG+GGG + chr8.3:72176077-72176096 MS.gene052728:intron 30.0%
!! ATCAACTATGTTTTTACCAG+TGG - chr8.3:72175436-72175455 None:intergenic 30.0%
!! ATCACTTTTCAAGAAAAGGA+TGG - chr8.3:72175240-72175259 None:intergenic 30.0%
!! ATGGATATTTTTCAGTAACC+GGG + chr8.3:72172816-72172835 MS.gene052728:intron 30.0%
!! GAGTTTATTAGCCTTAGATA+TGG - chr8.3:72175188-72175207 None:intergenic 30.0%
!! GTGGATATTTTTCAAAAGGT+AGG - chr8.3:72174250-72174269 None:intergenic 30.0%
!! TCAGAAATCTTTAGAACTGA+TGG + chr8.3:72174166-72174185 MS.gene052728:CDS 30.0%
!! TGATGGAACTTTAAAGTCTT+TGG + chr8.3:72175256-72175275 MS.gene052728:CDS 30.0%
!! TTCCATCACTTTTCAAGAAA+AGG - chr8.3:72175244-72175263 None:intergenic 30.0%
!!! AGTGATGGATTTGAGATTTT+CGG + chr8.3:72175946-72175965 MS.gene052728:intron 30.0%
AACATGTTAAGCTTACTTGG+AGG - chr8.3:72174516-72174535 None:intergenic 35.0%
AAGTGAATGGTTCCAACATT+TGG - chr8.3:72173031-72173050 None:intergenic 35.0%
AATCATTGAGAAACCGAGTT+GGG + chr8.3:72176849-72176868 MS.gene052728:CDS 35.0%
ACAAAACATGTACCTTTCTC+AGG - chr8.3:72176484-72176503 None:intergenic 35.0%
AGTGAATGGTTCCAACATTT+GGG - chr8.3:72173030-72173049 None:intergenic 35.0%
ATTAATCGCCTACTAAGAGT+TGG - chr8.3:72176460-72176479 None:intergenic 35.0%
CACATAGAGCTTAACTTAGA+GGG + chr8.3:72174998-72175017 MS.gene052728:CDS 35.0%
CAGTCATAGAAATCTTGTCA+AGG + chr8.3:72176684-72176703 MS.gene052728:intron 35.0%
CATCTCGTTTGGTTGATTAA+AGG + chr8.3:72173260-72173279 MS.gene052728:intron 35.0%
CCTACACCTAAAGTAATTCA+AGG + chr8.3:72174208-72174227 MS.gene052728:CDS 35.0%
CCTTGAATTACTTTAGGTGT+AGG - chr8.3:72174211-72174230 None:intergenic 35.0%
CGAAGAAAATACGATCAGTT+TGG - chr8.3:72173090-72173109 None:intergenic 35.0%
CGTGCAAAGAATTCAATAAG+TGG - chr8.3:72174269-72174288 None:intergenic 35.0%
CTCACTTGAAGGAAAAAGAA+GGG - chr8.3:72176894-72176913 None:intergenic 35.0%
GAATTAGAGAGGGAATTCAT+TGG - chr8.3:72175522-72175541 None:intergenic 35.0%
GATACACTTACTTCCTTTCT+GGG + chr8.3:72172631-72172650 MS.gene052728:CDS 35.0%
GATGTGCTTGATCTATATGA+AGG + chr8.3:72174088-72174107 MS.gene052728:CDS 35.0%
GGGATGCTATATTAAGACAT+GGG + chr8.3:72176186-72176205 MS.gene052728:intron 35.0%
GTATAGTGACCAACATAGTT+AGG - chr8.3:72175974-72175993 None:intergenic 35.0%
GTTGATGCAAAAGAATGTCT+TGG + chr8.3:72172540-72172559 MS.gene052728:CDS 35.0%
GTTTGTTTATCTCCCAATGT+TGG - chr8.3:72172893-72172912 None:intergenic 35.0%
TCACAAACTCATTTAGCGAT+TGG - chr8.3:72175920-72175939 None:intergenic 35.0%
TCCATAAACAAGAAAGTCTG+AGG - chr8.3:72173981-72174000 None:intergenic 35.0%
TGATACACTTACTTCCTTTC+TGG + chr8.3:72172630-72172649 MS.gene052728:CDS 35.0%
TGGAAAGAAGTTGTAGAAGT+GGG + chr8.3:72176280-72176299 MS.gene052728:CDS 35.0%
TGGATGACTGATGAAGAATT+TGG + chr8.3:72174448-72174467 MS.gene052728:CDS 35.0%
TGGGATGCTATATTAAGACA+TGG + chr8.3:72176185-72176204 MS.gene052728:intron 35.0%
! ACCTTTTGATAAGATCAGCA+GGG - chr8.3:72175879-72175898 None:intergenic 35.0%
! ATTCCAAGAGATGAAGCTTT+TGG + chr8.3:72173944-72173963 MS.gene052728:CDS 35.0%
! ATTCTTTTGCATCAACACCA+AGG - chr8.3:72172536-72172555 None:intergenic 35.0%
! CTTCATGCAGCTGTTAATTT+TGG + chr8.3:72176400-72176419 MS.gene052728:CDS 35.0%
! CTTGATGATATCCCAAATGT+TGG + chr8.3:72173016-72173035 MS.gene052728:CDS 35.0%
! GAAGGAAAAAGAAGGGTATA+AGG - chr8.3:72176887-72176906 None:intergenic 35.0%
! GCAATGTTTCTACACTTAAC+TGG + chr8.3:72174857-72174876 MS.gene052728:intron 35.0%
! TACCTTTTGATAAGATCAGC+AGG - chr8.3:72175880-72175899 None:intergenic 35.0%
! TCCTCAGACTTTCTTGTTTA+TGG + chr8.3:72173977-72173996 MS.gene052728:CDS 35.0%
! TTGAAGACTTTAAGAGGAGA+TGG + chr8.3:72173579-72173598 MS.gene052728:CDS 35.0%
!! GCACTATCTAGCTTACTTTT+TGG - chr8.3:72174941-72174960 None:intergenic 35.0%
!! TGGATATTTTTCAGTAACCG+GGG + chr8.3:72172817-72172836 MS.gene052728:intron 35.0%
!! TGTTGATGGACTTGACATTT+GGG + chr8.3:72176166-72176185 MS.gene052728:intron 35.0%
!!! CTATCTAGCTTACTTTTTGG+AGG - chr8.3:72174938-72174957 None:intergenic 35.0%
!!! GAGTAATTTTGATGGATTGC+AGG + chr8.3:72175611-72175630 MS.gene052728:intron 35.0%
AAAAGACATTCTTGTGGGGA+GGG + chr8.3:72175794-72175813 MS.gene052728:CDS 40.0%
AAACTTCTTGAAGGCTGCTA+TGG - chr8.3:72176777-72176796 None:intergenic 40.0%
AAGCTAGATAGTGCAGTCTA+TGG + chr8.3:72174947-72174966 MS.gene052728:CDS 40.0%
AAGGATGGTTCTTGAAGCAT+AGG - chr8.3:72175225-72175244 None:intergenic 40.0%
AATTGATCTCCTTGAGGATG+TGG - chr8.3:72175299-72175318 None:intergenic 40.0%
AGTTTGTGAGCGATTAGTGA+TGG + chr8.3:72175931-72175950 MS.gene052728:intron 40.0%
ATAGCAGCCTTCAAGAAGTT+TGG + chr8.3:72176776-72176795 MS.gene052728:CDS 40.0%
ATAGTCTAACCTGTTGCAGT+TGG - chr8.3:72173756-72173775 None:intergenic 40.0%
ATATGACAGGAGAGACATGA+AGG - chr8.3:72174292-72174311 None:intergenic 40.0%
ATGTGGAAGACTTAGCTCAA+TGG - chr8.3:72175282-72175301 None:intergenic 40.0%
ATTCTTGCTGGTGTAAATCC+TGG + chr8.3:72174478-72174497 MS.gene052728:CDS 40.0%
ATTTAGGGGAATAGCAGTTG+CGG + chr8.3:72176091-72176110 MS.gene052728:intron 40.0%
CAACTTCTTTCCACCAAGAT+TGG - chr8.3:72176273-72176292 None:intergenic 40.0%
CAAGTCCATCAACAGCATAA+GGG - chr8.3:72176160-72176179 None:intergenic 40.0%
CATCCTCAAGGAGATCAATT+CGG + chr8.3:72175299-72175318 MS.gene052728:CDS 40.0%
CCTCACTTGAAGGAAAAAGA+AGG - chr8.3:72176895-72176914 None:intergenic 40.0%
CGAGTTGCAAACAAAGTGAA+TGG - chr8.3:72173044-72173063 None:intergenic 40.0%
CTCGTTTGGTTGATTAAAGG+TGG + chr8.3:72173263-72173282 MS.gene052728:intron 40.0%
CTGTTCGTTGCTATGACAAA+TGG - chr8.3:72175661-72175680 None:intergenic 40.0%
CTTTAGGTGTAGGAAACTTG+AGG - chr8.3:72174201-72174220 None:intergenic 40.0%
GAAAGTCTGAGGATTTCAAG+TGG - chr8.3:72173970-72173989 None:intergenic 40.0%
GAATCATTGAGAAACCGAGT+TGG + chr8.3:72176848-72176867 MS.gene052728:CDS 40.0%
GATCCTACGAAGATTATCGA+TGG + chr8.3:72172580-72172599 MS.gene052728:CDS 40.0%
GATTACCCTTATGCTGTTGA+TGG + chr8.3:72176152-72176171 MS.gene052728:intron 40.0%
GCACATAGAGCTTAACTTAG+AGG + chr8.3:72174997-72175016 MS.gene052728:CDS 40.0%
GCTTCTGATGAATACTACCT+TGG + chr8.3:72176710-72176729 MS.gene052728:CDS 40.0%
GGTAGCTAGCTCATTATACT+CGG - chr8.3:72176603-72176622 None:intergenic 40.0%
GTGCTTGATCTATATGAAGG+AGG + chr8.3:72174091-72174110 MS.gene052728:CDS 40.0%
GTGGAAAGAAGTTGTAGAAG+TGG + chr8.3:72176279-72176298 MS.gene052728:CDS 40.0%
GTTAAGCTCTATGTGCTCTT+TGG - chr8.3:72174993-72175012 None:intergenic 40.0%
TAAACCGTCCAACTCTTAGT+AGG + chr8.3:72176449-72176468 MS.gene052728:intron 40.0%
TCAAGTCCATCAACAGCATA+AGG - chr8.3:72176161-72176180 None:intergenic 40.0%
TCACAAACACTCATCTCGTT+TGG + chr8.3:72173249-72173268 MS.gene052728:intron 40.0%
TCATCCTTAGTCAATGCAGA+TGG + chr8.3:72175763-72175782 MS.gene052728:CDS 40.0%
TCCCTGCTGATCTTATCAAA+AGG + chr8.3:72175875-72175894 MS.gene052728:CDS 40.0%
TCGACAGAGAGATCGATTAA+GGG + chr8.3:72174313-72174332 MS.gene052728:intron 40.0%
TCTCTCTGTCGAAATATGAC+AGG - chr8.3:72174305-72174324 None:intergenic 40.0%
TTCATGGTATCGCGATAATG+TGG - chr8.3:72175724-72175743 None:intergenic 40.0%
TTCGACAGAGAGATCGATTA+AGG + chr8.3:72174312-72174331 MS.gene052728:intron 40.0%
TTCTCAAGTAAGCCTTCTGA+GGG - chr8.3:72176628-72176647 None:intergenic 40.0%
TTGATTAAAGGTGGTGAGTG+TGG + chr8.3:72173272-72173291 MS.gene052728:intron 40.0%
TTTGATAAGATCAGCAGGGA+GGG - chr8.3:72175875-72175894 None:intergenic 40.0%
TTTGGAAGAGAGATTCTTGC+TGG + chr8.3:72174466-72174485 MS.gene052728:CDS 40.0%
TTTGGGCAATATCCATATGG+AGG + chr8.3:72176418-72176437 MS.gene052728:CDS 40.0%
! AAAGAGACAGTGCTGAGTAT+TGG + chr8.3:72176735-72176754 MS.gene052728:CDS 40.0%
! ACTTTAAGAGGAGATGGAAC+GGG + chr8.3:72173585-72173604 MS.gene052728:CDS 40.0%
! ATTATCGATGGAGCGTTAGA+CGG + chr8.3:72172592-72172611 MS.gene052728:CDS 40.0%
! CCTTCTTTTTCCTTCAAGTG+AGG + chr8.3:72176892-72176911 MS.gene052728:CDS 40.0%
! CTTTTTCCTTCAAGTGAGGA+AGG + chr8.3:72176896-72176915 MS.gene052728:CDS 40.0%
! GACTTTAAGAGGAGATGGAA+CGG + chr8.3:72173584-72173603 MS.gene052728:CDS 40.0%
! TCACTTTGTTTGCAACTCGT+GGG + chr8.3:72173045-72173064 MS.gene052728:CDS 40.0%
! TCTTCGCGAGTTTGCATTTT+CGG - chr8.3:72176337-72176356 None:intergenic 40.0%
! TCTTGAAGCATAGGCTTTTG+TGG - chr8.3:72175216-72175235 None:intergenic 40.0%
! TTCACTTTGTTTGCAACTCG+TGG + chr8.3:72173044-72173063 MS.gene052728:CDS 40.0%
! TTTTCGGTCCCTAACTATGT+TGG + chr8.3:72175962-72175981 MS.gene052728:intron 40.0%
! TTTTGATAAGATCAGCAGGG+AGG - chr8.3:72175876-72175895 None:intergenic 40.0%
!! AAGGTGTTGAAGCTACTGTT+TGG + chr8.3:72175354-72175373 MS.gene052728:CDS 40.0%
!! AATGCCATCTGCATTGACTA+AGG - chr8.3:72175770-72175789 None:intergenic 40.0%
!! ATTTTTCAGTAACCGGGGAA+GGG + chr8.3:72172822-72172841 MS.gene052728:intron 40.0%
!! CTGTTGATGGACTTGACATT+TGG + chr8.3:72176165-72176184 MS.gene052728:intron 40.0%
!! GATAGCAACTTTGGAATTCC+TGG + chr8.3:72172938-72172957 MS.gene052728:CDS 40.0%
!! TATTTTTCAGTAACCGGGGA+AGG + chr8.3:72172821-72172840 MS.gene052728:intron 40.0%
!!! AGCGTAGTTTTGACCCTTAT+CGG - chr8.3:72173670-72173689 None:intergenic 40.0%
ACAAATCGATCGACCCAGAA+AGG - chr8.3:72172647-72172666 None:intergenic 45.0%
ACACCGAATTGATCTCCTTG+AGG - chr8.3:72175305-72175324 None:intergenic 45.0%
ACTCTGAACTCCAATCTTGG+TGG + chr8.3:72176260-72176279 MS.gene052728:CDS 45.0%
AGAGAGATCGATTAAGGGGT+TGG + chr8.3:72174318-72174337 MS.gene052728:intron 45.0%
AGGACTCTGAACTCCAATCT+TGG + chr8.3:72176257-72176276 MS.gene052728:CDS 45.0%
AGGCGATTAATGCCTGAGAA+AGG + chr8.3:72176469-72176488 MS.gene052728:intron 45.0%
AGGGTATAAGGCATGCTAAC+CGG - chr8.3:72176875-72176894 None:intergenic 45.0%
ATCACTAGTCGAAGACCGTA+AGG - chr8.3:72176128-72176147 None:intergenic 45.0%
ATCGCCTACTAAGAGTTGGA+CGG - chr8.3:72176456-72176475 None:intergenic 45.0%
CATCAAGAGTCAAGCTCACA+AGG - chr8.3:72173003-72173022 None:intergenic 45.0%
CGACAGAGAGATCGATTAAG+GGG + chr8.3:72174314-72174333 MS.gene052728:intron 45.0%
CGGTCTTCGACTAGTGATAA+AGG + chr8.3:72176130-72176149 MS.gene052728:CDS 45.0%
CTAAGTCTTCCACATCCTCA+AGG + chr8.3:72175287-72175306 MS.gene052728:CDS 45.0%
CTATAGTAGACAAGTGGAGC+AGG - chr8.3:72173549-72173568 None:intergenic 45.0%
GAAAAGACATTCTTGTGGGG+AGG + chr8.3:72175793-72175812 MS.gene052728:CDS 45.0%
GAAGTTGTAGAAGTGGGTCA+TGG + chr8.3:72176286-72176305 MS.gene052728:CDS 45.0%
GAGTAGTGAGTAAGTCTGCA+TGG + chr8.3:72174428-72174447 MS.gene052728:intron 45.0%
GCTCCATCGATAATCTTCGT+AGG - chr8.3:72172586-72172605 None:intergenic 45.0%
GCTTCAACACCTTCAATTGC+AGG - chr8.3:72175347-72175366 None:intergenic 45.0%
GTCTACTTGCCTGCAATTGA+AGG + chr8.3:72175335-72175354 MS.gene052728:CDS 45.0%
GTTCTCAAGTAAGCCTTCTG+AGG - chr8.3:72176629-72176648 None:intergenic 45.0%
TACTGTTTGGCTACTTGCCA+AGG + chr8.3:72175367-72175386 MS.gene052728:CDS 45.0%
TCACTAGTCGAAGACCGTAA+GGG - chr8.3:72176127-72176146 None:intergenic 45.0%
TGGCCAAAAGCTTCATCTCT+TGG - chr8.3:72173950-72173969 None:intergenic 45.0%
TTGAGGGACAACTCATTCTG+AGG + chr8.3:72176816-72176835 MS.gene052728:CDS 45.0%
TTTAAGAGGAGATGGAACGG+GGG + chr8.3:72173587-72173606 MS.gene052728:CDS 45.0%
TTTACCAGTGGCTGACAAGT+TGG - chr8.3:72175424-72175443 None:intergenic 45.0%
! AAACTACGCTCGTCCAGTTT+TGG + chr8.3:72173680-72173699 MS.gene052728:CDS 45.0%
! AACTACGCTCGTCCAGTTTT+GGG + chr8.3:72173681-72173700 MS.gene052728:CDS 45.0%
! CTTTAAGAGGAGATGGAACG+GGG + chr8.3:72173586-72173605 MS.gene052728:CDS 45.0%
! TTATCGATGGAGCGTTAGAC+GGG + chr8.3:72172593-72172612 MS.gene052728:CDS 45.0%
! TTTTCCAAGTTTCCCTTCCC+CGG - chr8.3:72172837-72172856 None:intergenic 45.0%
!! GAGGAAGGACTTGCTTTTAG+AGG + chr8.3:72176911-72176930 MS.gene052728:CDS 45.0%
!!! CGTAGTTTTGACCCTTATCG+GGG - chr8.3:72173668-72173687 None:intergenic 45.0%
!!! GCGTAGTTTTGACCCTTATC+GGG - chr8.3:72173669-72173688 None:intergenic 45.0%
!! TAAATTTCTTATTAATAATA+TGG + chr8.3:72174578-72174597 MS.gene052728:intron 5.0%
!!! ATGTATTTTTATAATTTATA+AGG - chr8.3:72174668-72174687 None:intergenic 5.0%
AACAGCTGCATGAAGAGCTG+AGG - chr8.3:72176395-72176414 None:intergenic 50.0%
ACAAGAAAGACGAGCCATGG+TGG + chr8.3:72176311-72176330 MS.gene052728:CDS 50.0%
AGAGGGTCTCACTGTTGATG+AGG + chr8.3:72175015-72175034 MS.gene052728:CDS 50.0%
AGTGGAGCAGGTGTTTCACT+TGG - chr8.3:72173537-72173556 None:intergenic 50.0%
CAAGAGTCAAGCTCACAAGG+AGG - chr8.3:72173000-72173019 None:intergenic 50.0%
CACTAGTCGAAGACCGTAAG+GGG - chr8.3:72176126-72176145 None:intergenic 50.0%
CAGATCCTAACACTGAGAGC+AGG + chr8.3:72173906-72173925 MS.gene052728:intron 50.0%
CAGCACTGTCTCTTTGTCCA+AGG - chr8.3:72176730-72176749 None:intergenic 50.0%
CTAGCAGCCTTCCTTATCCT+CGG + chr8.3:72173709-72173728 MS.gene052728:CDS 50.0%
CTGCTAGATCCTCCCAAAAC+TGG - chr8.3:72173696-72173715 None:intergenic 50.0%
GATTTGGGTGACCCCGATAA+GGG + chr8.3:72173654-72173673 MS.gene052728:CDS 50.0%
GCAAGTCCTTCCTCACTTGA+AGG - chr8.3:72176905-72176924 None:intergenic 50.0%
GCGGATTCAACTTCCCCTTA+CGG + chr8.3:72176110-72176129 MS.gene052728:CDS 50.0%
GGCAGAAAACCAACTGCAAC+AGG + chr8.3:72173744-72173763 MS.gene052728:CDS 50.0%
GTGACAAGAAAGACGAGCCA+TGG + chr8.3:72176308-72176327 MS.gene052728:CDS 50.0%
TTATCCTCGGAGGGGAAGAA+CGG + chr8.3:72173722-72173741 MS.gene052728:CDS 50.0%
TTCACCAACTTGTCAGCCAC+TGG + chr8.3:72175417-72175436 MS.gene052728:CDS 50.0%
! ATTGAGAAACCGAGTTGGGC+CGG + chr8.3:72176853-72176872 MS.gene052728:CDS 50.0%
! CAAGTAAGCCTTCTGAGGGT+TGG - chr8.3:72176624-72176643 None:intergenic 50.0%
! GTTTGCATTTTCGGCCACCA+TGG - chr8.3:72176328-72176347 None:intergenic 50.0%
! TGATTTGGGTGACCCCGATA+AGG + chr8.3:72173653-72173672 MS.gene052728:CDS 50.0%
AGCCTTCCTTATCCTCGGAG+GGG + chr8.3:72173714-72173733 MS.gene052728:CDS 55.0%
CAGCCTTCCTTATCCTCGGA+GGG + chr8.3:72173713-72173732 MS.gene052728:CDS 55.0%
GAGCTCCTGCTCTCAGTGTT+AGG - chr8.3:72173914-72173933 None:intergenic 55.0%
GCTAGCTACCAACCCTCAGA+AGG + chr8.3:72176613-72176632 MS.gene052728:intron 55.0%
GTAACCGGGGAAGGGAAACT+TGG + chr8.3:72172830-72172849 MS.gene052728:intron 55.0%
GTTCTTCCCCTCCGAGGATA+AGG - chr8.3:72173723-72173742 None:intergenic 55.0%
TAAGATCAGCAGGGAGGGCT+TGG - chr8.3:72175870-72175889 None:intergenic 55.0%
TATCCTCGGAGGGGAAGAAC+GGG + chr8.3:72173723-72173742 MS.gene052728:CDS 55.0%
TGGAGGCTGCGAATTAAGCC+AGG - chr8.3:72174499-72174518 None:intergenic 55.0%
TTCCCCTCCGAGGATAAGGA+AGG - chr8.3:72173719-72173738 None:intergenic 55.0%
! AACGGGGGAGCGCAAAGAAT+GGG + chr8.3:72173602-72173621 MS.gene052728:CDS 55.0%
! CTTGTGGGGAGGGTATGCTA+TGG + chr8.3:72175804-72175823 MS.gene052728:CDS 55.0%
! GATGGAGCGTTAGACGGGTT+TGG + chr8.3:72172598-72172617 MS.gene052728:CDS 55.0%
!!! TACGCTCGTCCAGTTTTGGG+AGG + chr8.3:72173684-72173703 MS.gene052728:CDS 55.0%
GCAGCCTTCCTTATCCTCGG+AGG + chr8.3:72173712-72173731 MS.gene052728:CDS 60.0%
GCATGCTAACCGGCCCAACT+CGG - chr8.3:72176865-72176884 None:intergenic 60.0%
! GAACGGGGGAGCGCAAAGAA+TGG + chr8.3:72173601-72173620 MS.gene052728:CDS 60.0%
CTGCCCGTTCTTCCCCTCCG+AGG - chr8.3:72173729-72173748 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 72172523 72176958 72172523 ID=MS.gene052728
chr8.3 mRNA 72172523 72176958 72172523 ID=MS.gene052728.t1;Parent=MS.gene052728
chr8.3 exon 72172523 72172697 72172523 ID=MS.gene052728.t1.exon1;Parent=MS.gene052728.t1
chr8.3 CDS 72172523 72172697 72172523 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72172831 72173117 72172831 ID=MS.gene052728.t1.exon2;Parent=MS.gene052728.t1
chr8.3 CDS 72172831 72173117 72172831 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72173525 72173765 72173525 ID=MS.gene052728.t1.exon3;Parent=MS.gene052728.t1
chr8.3 CDS 72173525 72173765 72173525 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72173909 72174229 72173909 ID=MS.gene052728.t1.exon4;Parent=MS.gene052728.t1
chr8.3 CDS 72173909 72174229 72173909 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72174434 72174519 72174434 ID=MS.gene052728.t1.exon5;Parent=MS.gene052728.t1
chr8.3 CDS 72174434 72174519 72174434 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72174929 72175036 72174929 ID=MS.gene052728.t1.exon6;Parent=MS.gene052728.t1
chr8.3 CDS 72174929 72175036 72174929 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72175134 72175438 72175134 ID=MS.gene052728.t1.exon7;Parent=MS.gene052728.t1
chr8.3 CDS 72175134 72175438 72175134 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72175633 72175896 72175633 ID=MS.gene052728.t1.exon8;Parent=MS.gene052728.t1
chr8.3 CDS 72175633 72175896 72175633 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72176097 72176166 72176097 ID=MS.gene052728.t1.exon9;Parent=MS.gene052728.t1
chr8.3 CDS 72176097 72176166 72176097 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72176202 72176439 72176202 ID=MS.gene052728.t1.exon10;Parent=MS.gene052728.t1
chr8.3 CDS 72176202 72176439 72176202 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
chr8.3 exon 72176687 72176958 72176687 ID=MS.gene052728.t1.exon11;Parent=MS.gene052728.t1
chr8.3 CDS 72176687 72176958 72176687 ID=cds.MS.gene052728.t1;Parent=MS.gene052728.t1
Gene Sequence

>MS.gene052728

ATCAAAGGCACCTTGGTGTTGATGCAAAAGAATGTCTTGGACATCAACAGCTTAACTGATCCTACGAAGATTATCGATGGAGCGTTAGACGGGTTTGGATCGATTTTTGATACACTTACTTCCTTTCTGGGTCGATCGATTTGTCTCCAGTTAATTAGCTCTACTAAAACTGGGTGTAAGTTTTTTTTTTTTTTTGTCAAATTACAAAGTGAAAAATTAATGTTTGAGACAAATTATTCTCCATCTCGGTACAAATTAATTTATGCTTTATAAGTAACTTTAAGTTTTAATTTATGGATATTTTTCAGTAACCGGGGAAGGGAAACTTGGAAAAGAAGCTTATTTAAAAGAGGCAATTAACAATTTGCCAACATTGGGAGATAAACAAACAGCTTTCAGCATTGAATTTGAATATGATAGCAACTTTGGAATTCCTGGAGCATTCAAAATTAAGAACTTTATGTCAACTGAGTTCCTCCTTGTGAGCTTGACTCTTGATGATATCCCAAATGTTGGAACCATTCACTTTGTTTGCAACTCGTGGGTTTACAATGCGAAAAACTACCAAACTGATCGTATTTTCTTCGCCAACAATGTAAGAGCAATCTATCTATCCACATAATAGTATTTAAATATAATTTTTTATAGTATAGAAAAAATTTCTCTCATCTTTATTCAAGTTTGCTTGAATGATTGATATGTATACATCACTTCTATTTATTATTTTCACAAACACTCATCTCGTTTGGTTGATTAAAGGTGGTGAGTGTGGTCACCTTATTAAACAAATAAATATTGTGACAAAAGTTTATTTTTGAAAATGTTATTTAATATGTTAGTTGCTTGAGAAACAAGCTAACTGATGTCATACATTATCATCACATACTATACCAATAATAAAAATCTTAAAGGCTATCCCTTTCAACTTTCAATGTTGTTATTCGACATTCGTTATAAAATTCCTTGAAGTGTGTAACATCAAATACATAAAATATTTTGCAGACTTTTCTACCAAGTGAAACACCTGCTCCACTTGTCTACTATAGACAATTAGAGTTGAAGACTTTAAGAGGAGATGGAACGGGGGAGCGCAAAGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGTGACCCCGATAAGGGTCAAAACTACGCTCGTCCAGTTTTGGGAGGATCTAGCAGCCTTCCTTATCCTCGGAGGGGAAGAACGGGCAGAAAACCAACTGCAACAGGTTAGACTATGTTCTTATATTCATGTCTTATCTCCTTTTTCTTTCTCTCTTTAGTAAACTTTAGCATAAACTTTAGAATAATATCATTATAATGAAATATATTTTACTGTTACTTATATTTTTTTAATCAATTATCACAACAGATCCTAACACTGAGAGCAGGAGCTCTAGTGTGTATATTCCAAGAGATGAAGCTTTTGGCCACTTGAAATCCTCAGACTTTCTTGTTTATGGACTTAAATCTGTTTCTCAAGATGTGATTCCATTGATACAATCTGTATTTGACACAAACTTCTCACCAAATGAATTTGATAGCTTTGATGATGTGCTTGATCTATATGAAGGAGGAATTAAGCTACCAACAGATATACTTAGTCAAATTAGTCCTTTACCAGTGTTATCAGAAATCTTTAGAACTGATGGTGAACAATTCCTCAAGTTTCCTACACCTAAAGTAATTCAAGGTATACCATTATTATATCCTACCTTTTGAAAAATATCCACTTATTGAATTCTTTGCACGCCTTCATGTCTCTCCTGTCATATTTCGACAGAGAGATCGATTAAGGGGTTGGAGAAGATCCAAGTTTTTCAAATGACACTTTTGACTAAAATTCAATAAAAAGTATATGAAGATTTTATGGACTAATCATTATTATTTTGAGTAGTGAGTAAGTCTGCATGGATGACTGATGAAGAATTTGGAAGAGAGATTCTTGCTGGTGTAAATCCTGGCTTAATTCGCAGCCTCCAAGTAAGCTTAACATGTTCATTAGTAAACATGAAACTAACATTAAATTTTTGCATTAATTTAAATTTCTTATTAATAATATGGTTACTATACTTTTAGTCCATAGAAAATTGATATATTGTGTTTTCAATTTATGTATTCACATAGTCCTTATAAATTATAAAAATACATACTTAGTCCTTAAAAAGAGACTAAAAATATGCAGTTTTGTAATTTGCATATCAATAGAAAATTGGATACAGAAACTAAAAACCAAATTTGGATAGAAAATTGGATATAGAAACTAAAAGCGAAACTCGAGATAATTATACTTATAGGTAATAAAAAATATTTAACTTTAGCAATGTTTCTACACTTAACTGGCCCTAATTGTTAAACATCATTCTTTCATGATTTTCCAAAATAATTACAGGAATTTCCTCCAAAAAGTAAGCTAGATAGTGCAGTCTATGGTGATCATACTAGCACGATAACCAAAGAGCACATAGAGCTTAACTTAGAGGGTCTCACTGTTGATGAGGTAAAGATAAATATGTTTGTTTCTCTATCGCCAAATTTGATTTATTTAGTATGGTTCCAATGAATAGAATTGACCAAGTGATTAATTTTTTGAACAGGCTATACAAAACAAGAAATTGTTCTTGCTAGAACACCATGACACAATAATTCCATATCTAAGGCTAATAAACTCAACTTCCACAAAAGCCTATGCTTCAAGAACCATCCTTTTCTTGAAAAGTGATGGAACTTTAAAGTCTTTGGCCATTGAGCTAAGTCTTCCACATCCTCAAGGAGATCAATTCGGTGTTGTTAGTAATGTCTACTTGCCTGCAATTGAAGGTGTTGAAGCTACTGTTTGGCTACTTGCCAAGGCTTATGTTATAGTAAACGACTCGTGCTTTCACCAACTTGTCAGCCACTGGTAAAAACATAGTTGATGATATTTGAATCAATAAATACTAATAGATGGAATAAAATTAGCAATGAAAATTAGCGACTAAACCAATGAATTCCCTCTCTAATTCCTTTGTTGTAAAATTTAGTGACATAATTAGAGAGGAATTACACACGTTTTTCCTATCTAAATTGACTATGAGTAATTTTGATGGATTGCAGGTTAAATACTCATGCAGTTGTTGAACCATTTGTCATAGCAACGAACAGACAACTTAGTGTGCTTCATCCTATTTACAAACTATTGCATCCACATTATCGCGATACCATGAATATAAATGCACTTGCTAGATCATCCTTAGTCAATGCAGATGGCATTATTGAAAAGACATTCTTGTGGGGAGGGTATGCTATGGAAATATCTTCAAAAGTTTATAAGGATTGGGTTTTTACAGACCAAGCCCTCCCTGCTGATCTTATCAAAAGGTAATTCTTACAAATATACACCAATCGCTAAATGAGTTTGTGAGCGATTAGTGATGGATTTGAGATTTTCGGTCCCTAACTATGTTGGTCACTATACGATAGTTTTTTATAGTTAAAGGAATTAAAGTTGAATGATCATGATTTTATAAGGACTAACAATATATTTAACCAGTATAATTATTGTGCTCTTGTTTATTTAGGGGAATAGCAGTTGCGGATTCAACTTCCCCTTACGGTCTTCGACTAGTGATAAAGGATTACCCTTATGCTGTTGATGGACTTGACATTTGGGATGCTATATTAAGACATGGGTTCAAGACTATGTCTCCATATACTTCACATCAGATGAAAAAATTCAGCAGGACTCTGAACTCCAATCTTGGTGGAAAGAAGTTGTAGAAGTGGGTCATGGTGACAAGAAAGACGAGCCATGGTGGCCGAAAATGCAAACTCGCGAAGAGTTGATTCAAGTTTGCAGTATTATCATATGGACTGCCTCAGCTCTTCATGCAGCTGTTAATTTTGGGCAATATCCATATGGAGGTTTCATATTAAACCGTCCAACTCTTAGTAGGCGATTAATGCCTGAGAAAGGTACATGTTTTGTTTTAGTCTCCGCAAAAAATATTCGTATCAAAATTGGTATCTGTAATATATATTTTATCGAGACTAAAATCAAATATGTTACATATTGCAGGTACTACCGAGTATAATGAGCTAGCTACCAACCCTCAGAAGGCTTACTTGAGAACAATTACACCAAAGTTTCAAACTCTGATTGATCTATCAGTCATAGAAATCTTGTCAAGGCATGCTTCTGATGAATACTACCTTGGACAAAGAGACAGTGCTGAGTATTGGACTTCTGATACAAATGCCATAGCAGCCTTCAAGAAGTTTGGAAAAACTCTAGCTGAAATTGAGGGACAACTCATTCTGAGGAACAACAATGAATCATTGAGAAACCGAGTTGGGCCGGTTAGCATGCCTTATACCCTTCTTTTTCCTTCAAGTGAGGAAGGACTTGCTTTTAGAGGAATTCCCAACAGTATCTCAATCTAA
Protein sequence

>MS.gene052728.t1

IKGTLVLMQKNVLDINSLTDPTKIIDGALDGFGSIFDTLTSFLGRSICLQLISSTKTGLTGEGKLGKEAYLKEAINNLPTLGDKQTAFSIEFEYDSNFGIPGAFKIKNFMSTEFLLVSLTLDDIPNVGTIHFVCNSWVYNAKNYQTDRIFFANNTFLPSETPAPLVYYRQLELKTLRGDGTGERKEWDRVYDYDVYNDLGDPDKGQNYARPVLGGSSSLPYPRRGRTGRKPTATDPNTESRSSSVYIPRDEAFGHLKSSDFLVYGLKSVSQDVIPLIQSVFDTNFSPNEFDSFDDVLDLYEGGIKLPTDILSQISPLPVLSEIFRTDGEQFLKFPTPKVIQVSKSAWMTDEEFGREILAGVNPGLIRSLQEFPPKSKLDSAVYGDHTSTITKEHIELNLEGLTVDEAIQNKKLFLLEHHDTIIPYLRLINSTSTKAYASRTILFLKSDGTLKSLAIELSLPHPQGDQFGVVSNVYLPAIEGVEATVWLLAKAYVIVNDSCFHQLVSHWLNTHAVVEPFVIATNRQLSVLHPIYKLLHPHYRDTMNINALARSSLVNADGIIEKTFLWGGYAMEISSKVYKDWVFTDQALPADLIKRGIAVADSTSPYGLRLVIKDYPYATWVQDYVSIYFTSDEKIQQDSELQSWWKEVVEVGHGDKKDEPWWPKMQTREELIQVCSIIIWTASALHAAVNFGQYPYGVIEILSRHASDEYYLGQRDSAEYWTSDTNAIAAFKKFGKTLAEIEGQLILRNNNESLRNRVGPVSMPYTLLFPSSEEGLAFRGIPNSISI