AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053003

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053003.t1 MTR_6g406250 96.078 357 14 0 1 357 1 357 0.0 709
MS.gene053003.t1 MTR_6g406250 95.785 261 11 0 1 261 1 261 0.0 518
MS.gene053003.t1 MTR_5g029990 31.457 302 191 7 49 348 6 293 1.97e-48 165
MS.gene053003.t1 MTR_4g006940 33.223 301 180 7 51 344 13 299 1.19e-35 132
MS.gene053003.t1 MTR_3g005210 30.537 298 179 10 54 337 5 288 1.24e-34 129
MS.gene053003.t1 MTR_2g104960 32.026 306 187 7 46 344 11 302 2.74e-34 129
MS.gene053003.t1 MTR_3g005170 29.710 276 169 9 54 318 9 270 2.75e-32 122
MS.gene053003.t1 MTR_4g006940 34.799 273 156 7 51 316 13 270 4.13e-32 122
MS.gene053003.t1 MTR_4g006940 34.799 273 156 7 51 316 13 270 4.13e-32 122
MS.gene053003.t1 MTR_5g056600 31.183 279 175 9 56 326 5 274 4.66e-32 122
MS.gene053003.t1 MTR_3g005170 29.710 276 169 9 54 318 9 270 6.12e-32 122
MS.gene053003.t1 MTR_7g074880 30.385 260 161 7 51 300 4 253 5.22e-30 117
MS.gene053003.t1 MTR_4g009040 31.559 263 171 4 55 314 13 269 6.46e-30 117
MS.gene053003.t1 MTR_5g072620 31.835 267 172 6 54 316 4 264 7.53e-30 117
MS.gene053003.t1 MTR_8g062110 28.938 273 174 8 54 318 8 268 7.81e-30 115
MS.gene053003.t1 MTR_8g062110 28.938 273 174 8 54 318 8 268 1.30e-29 115
MS.gene053003.t1 MTR_8g062110 28.938 273 174 8 54 318 17 277 1.78e-29 116
MS.gene053003.t1 MTR_8g062110 28.938 273 174 8 54 318 8 268 1.80e-29 115
MS.gene053003.t1 MTR_2g101330 30.435 299 188 9 55 344 5 292 1.83e-29 116
MS.gene053003.t1 MTR_4g077130 29.139 302 188 13 54 343 8 295 7.78e-29 114
MS.gene053003.t1 MTR_4g009040 31.461 267 170 5 55 314 13 273 1.88e-28 113
MS.gene053003.t1 MTR_4g077100 28.239 301 192 11 54 343 10 297 4.14e-28 112
MS.gene053003.t1 MTR_4g077100 28.205 273 177 8 54 318 10 271 5.02e-27 108
MS.gene053003.t1 MTR_8g062440 28.125 288 179 10 54 328 7 279 5.80e-26 106
MS.gene053003.t1 MTR_8g062440 28.261 276 172 9 54 318 7 267 1.50e-25 105
MS.gene053003.t1 MTR_7g074730 30.534 262 160 9 51 300 4 255 2.04e-25 105
MS.gene053003.t1 MTR_8g062440 28.374 289 178 11 54 328 7 280 3.78e-25 104
MS.gene053003.t1 MTR_3g005170 29.259 270 147 10 54 318 9 239 1.23e-24 102
MS.gene053003.t1 MTR_7g074820 30.855 269 151 12 51 300 4 256 1.34e-24 102
MS.gene053003.t1 MTR_1g022445 29.297 256 161 10 55 300 8 253 2.18e-24 102
MS.gene053003.t1 MTR_1g022440 28.906 256 162 9 55 300 8 253 2.44e-24 102
MS.gene053003.t1 MTR_4g009690 31.559 263 170 5 55 314 13 268 3.17e-24 101
MS.gene053003.t1 MTR_3g031650 29.572 257 165 7 55 304 5 252 6.64e-24 99.8
MS.gene053003.t1 MTR_4g009690 30.798 263 173 4 55 314 13 269 9.06e-24 100
MS.gene053003.t1 MTR_3g031650 29.572 257 165 7 55 304 5 252 1.05e-23 100
MS.gene053003.t1 MTR_2g028620 29.213 267 173 8 54 312 9 267 6.29e-23 98.2
MS.gene053003.t1 MTR_2g028620 28.782 271 177 8 54 316 9 271 9.89e-23 97.4
MS.gene053003.t1 MTR_7g074850 28.897 263 164 10 51 300 4 256 1.43e-21 94.4
MS.gene053003.t1 MTR_7g074870 30.732 205 114 6 109 300 26 215 3.44e-21 92.4
MS.gene053003.t1 MTR_4g092080 26.882 279 170 8 43 300 2 267 5.72e-21 92.8
MS.gene053003.t1 MTR_4g081440 25.763 295 175 10 56 321 21 300 3.20e-19 87.8
MS.gene053003.t1 MTR_4g081440 25.763 295 175 10 56 321 25 304 3.50e-19 87.8
MS.gene053003.t1 MTR_7g074710 27.437 277 177 9 51 315 4 268 1.01e-18 86.3
MS.gene053003.t1 MTR_8g062110 28.415 183 121 5 139 318 7 182 1.04e-17 80.5
MS.gene053003.t1 MTR_8g062110 30.539 167 108 5 154 318 22 182 1.82e-17 81.3
MS.gene053003.t1 MTR_4g023730 27.338 278 178 9 52 316 5 271 1.02e-15 77.4
MS.gene053003.t1 MTR_3g011130 35.484 93 57 2 154 245 38 128 3.63e-12 63.9
MS.gene053003.t1 MTR_3g101500 28.796 191 115 7 55 245 4 173 2.49e-11 63.2
MS.gene053003.t1 MTR_3g101500 28.796 191 115 7 55 245 4 173 3.12e-11 63.9
MS.gene053003.t1 MTR_3g101500 28.796 191 115 7 55 245 4 173 3.79e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053003.t1 AT5G14700 53.083 373 153 8 1 357 1 367 3.75e-132 382
MS.gene053003.t1 AT5G14700 54.945 273 109 4 1 264 1 268 1.42e-99 296
MS.gene053003.t1 AT2G23910 34.853 307 179 8 56 354 11 304 1.78e-53 179
MS.gene053003.t1 AT2G23910 36.996 273 154 7 56 321 11 272 3.95e-53 177
MS.gene053003.t1 AT2G23910 36.996 273 154 7 56 321 11 272 4.84e-53 177
MS.gene053003.t1 AT4G30470 33.866 313 191 7 47 354 2 303 2.30e-50 171
MS.gene053003.t1 AT2G23910 35.556 270 156 7 90 354 14 270 5.79e-48 163
MS.gene053003.t1 AT4G35420 34.201 269 158 9 49 308 2 260 7.07e-38 138
MS.gene053003.t1 AT5G19440 32.776 299 181 10 54 343 9 296 1.81e-37 137
MS.gene053003.t1 AT1G09510 35.294 255 151 7 51 299 4 250 2.62e-37 137
MS.gene053003.t1 AT1G51410 32.450 302 176 11 55 343 9 295 8.45e-36 133
MS.gene053003.t1 AT1G15950 34.528 307 173 11 51 347 10 298 3.22e-35 132
MS.gene053003.t1 AT1G15950 34.528 307 173 11 51 347 10 298 4.07e-35 131
MS.gene053003.t1 AT1G15950 34.528 307 173 11 51 347 10 298 4.07e-35 131
MS.gene053003.t1 AT1G15950 36.000 275 149 10 51 316 10 266 3.02e-33 125
MS.gene053003.t1 AT1G15950 35.507 276 149 10 51 316 10 266 3.03e-33 125
MS.gene053003.t1 AT1G15950 36.000 275 149 10 51 316 10 266 4.71e-33 125
MS.gene053003.t1 AT1G80820 33.227 313 186 11 50 353 3 301 7.66e-33 125
MS.gene053003.t1 AT2G33590 32.390 318 184 11 49 352 3 303 1.83e-32 124
MS.gene053003.t1 AT1G80820 35.316 269 154 9 54 316 7 261 2.08e-31 120
MS.gene053003.t1 AT1G09500 32.171 258 156 7 51 299 4 251 3.95e-31 119
MS.gene053003.t1 AT1G09500 32.171 258 156 7 51 299 4 251 1.15e-30 119
MS.gene053003.t1 AT5G58490 31.359 287 177 8 45 322 2 277 1.31e-30 119
MS.gene053003.t1 AT1G68540 31.496 254 162 7 57 304 6 253 1.37e-30 119
MS.gene053003.t1 AT1G09480 32.061 262 150 10 51 299 4 250 3.62e-30 117
MS.gene053003.t1 AT1G09480 32.061 262 150 10 51 299 51 297 7.79e-30 118
MS.gene053003.t1 AT2G33600 31.230 317 187 10 50 352 4 303 1.47e-29 116
MS.gene053003.t1 AT1G66800 31.923 260 149 8 54 302 7 249 2.72e-29 115
MS.gene053003.t1 AT1G61720 31.599 269 154 8 51 300 9 266 3.95e-28 112
MS.gene053003.t1 AT2G02400 30.000 260 168 8 50 304 1 251 1.87e-27 110
MS.gene053003.t1 AT1G09490 29.389 262 157 9 51 299 4 250 2.10e-26 107
MS.gene053003.t1 AT1G09500 32.850 207 121 6 101 299 21 217 2.82e-24 101
MS.gene053003.t1 AT5G42800 28.405 257 168 7 52 300 5 253 2.09e-23 100
MS.gene053003.t1 AT4G27250 27.273 319 206 9 45 347 3 311 1.03e-22 97.8
MS.gene053003.t1 AT4G27250 26.748 329 205 10 45 347 3 321 1.06e-22 97.8
MS.gene053003.t1 AT1G25460 29.496 278 181 10 57 327 6 275 3.83e-22 95.9
MS.gene053003.t1 AT1G15950 33.493 209 123 6 146 347 1 200 1.06e-20 90.5
MS.gene053003.t1 AT2G45400 28.736 261 165 8 54 300 39 292 3.28e-20 90.5
MS.gene053003.t1 AT2G45400 28.736 261 165 8 54 300 39 292 4.20e-20 90.9
MS.gene053003.t1 AT1G76470 29.412 272 174 6 52 314 4 266 3.43e-19 87.4
MS.gene053003.t1 AT1G09490 28.910 211 123 8 101 299 24 219 3.48e-19 87.0
MS.gene053003.t1 AT1G68540 33.553 152 90 6 158 304 1 146 8.67e-17 78.6
MS.gene053003.t1 AT2G45400 26.639 244 161 8 66 300 1 235 5.98e-15 75.1

Find 61 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTAGTGGTGTTTCTTATC+TGG 0.160894 6.2:-1724069 MS.gene053003:CDS
CATCACTAGCTGCTTGTATT+TGG 0.218694 6.2:-1720055 MS.gene053003:CDS
TGAAGAGATGAGAAATAATT+TGG 0.235206 6.2:-1721384 MS.gene053003:CDS
TGCTTTGGTCAACCATCTTT+TGG 0.239008 6.2:-1724042 MS.gene053003:CDS
ATAGAGAAATTTAGAGAAAT+AGG 0.249947 6.2:-1721410 MS.gene053003:CDS
GCTAAATGATGTTGATAGTT+TGG 0.289039 6.2:-1721345 MS.gene053003:CDS
TACTCACTAAAGCACCTAAT+TGG 0.309558 6.2:+1718688 None:intergenic
GAGAAGCTAGCAAAGGATAT+TGG 0.331332 6.2:-1718805 MS.gene053003:CDS
CAAGAGCCATGGTTAATAAT+AGG 0.332492 6.2:+1720002 None:intergenic
GAGTTTCAAACCTCTTTCTT+TGG 0.338234 6.2:+1719664 None:intergenic
TTCTTATCTGGGTCTTGCTT+TGG 0.339545 6.2:-1724057 MS.gene053003:CDS
ATCACTCTGCATAGACAAAA+AGG 0.339690 6.2:-1719970 MS.gene053003:intron
GGGTTCCTATGACAAAATTC+AGG 0.360299 6.2:+1719611 None:intergenic
ACTAGTGGTGTTTCTTATCT+GGG 0.380794 6.2:-1724068 MS.gene053003:CDS
GACTCATGTCTAGGCCAATT+AGG 0.409683 6.2:-1718702 MS.gene053003:CDS
CTATTATTAACCATGGCTCT+TGG 0.427745 6.2:-1720001 MS.gene053003:CDS
ACCGACCCTGCTGGTCTCTC+TGG 0.432331 6.2:-1721275 MS.gene053003:CDS
GAAATGAAAGAAAATGCTTA+TGG 0.447338 6.2:-1718874 MS.gene053003:CDS
CGGCAGCAGCCACTAGATTC+CGG 0.459501 6.2:+1724186 None:intergenic
AGGCAAGATGAGAGCAGAAA+AGG 0.460238 6.2:-1719702 MS.gene053003:CDS
TGGCAGCTATGGTATGCATT+AGG 0.468934 6.2:-1719722 MS.gene053003:intron
TCTTTAGATGATGAAGATGT+TGG 0.471639 6.2:-1724110 MS.gene053003:CDS
TGAGAGCAGAAAAGGCTGCT+TGG 0.483584 6.2:-1719694 MS.gene053003:CDS
AACATCTTCATCATCTAAAG+AGG 0.488950 6.2:+1724112 None:intergenic
TTATAATATATAGAAATCAA+TGG 0.492063 6.2:-1720159 MS.gene053003:intron
TAGTTTGGAGAAAGCATTTG+AGG 0.492619 6.2:-1721330 MS.gene053003:CDS
AGCACATGCATGTGTGTTCA+AGG 0.493732 6.2:-1718896 MS.gene053003:CDS
TCAGGACCTGTGATAAGTGC+TGG 0.495879 6.2:+1719629 None:intergenic
GTGTATCCAGAGAGACCAGC+AGG 0.497284 6.2:+1721269 None:intergenic
AACAGTTGATGTAAAGAAAG+TGG 0.500773 6.2:-1718923 MS.gene053003:CDS
GGTAAGCAATTGATGCTGTT+GGG 0.501940 6.2:+1719591 None:intergenic
TTGGTTACATAATACCTTTG+AGG 0.502205 6.2:+1719570 None:intergenic
TGCCTAAAGAAAAGATATGT+GGG 0.511259 6.2:-1718780 MS.gene053003:CDS
ATGCCTAAAGAAAAGATATG+TGG 0.515158 6.2:-1718781 MS.gene053003:CDS
TGGCTGCTGCCGGCATACAC+CGG 0.519967 6.2:-1724175 MS.gene053003:CDS
TGTGATAAGTGCTGGACAAA+TGG 0.525063 6.2:+1719637 None:intergenic
GCATCAATTGCTTACCTCAA+AGG 0.532977 6.2:-1719584 MS.gene053003:intron
TGGAGAATAGCCAAAGAAAG+AGG 0.536882 6.2:-1719674 MS.gene053003:CDS
TCTGCATTTACCGACCCTGC+TGG 0.539280 6.2:-1721284 MS.gene053003:CDS
GGTTAATAATAGGAGTAGTA+AGG 0.539956 6.2:+1720012 None:intergenic
AGTTTGGAGAAAGCATTTGA+GGG 0.540148 6.2:-1721329 MS.gene053003:CDS
CGAATAATTGTTGACAACCC+AGG 0.553344 6.2:-1724002 MS.gene053003:intron
AGGTAAGCAATTGATGCTGT+TGG 0.557919 6.2:+1719590 None:intergenic
CGGAATCTAGTGGCTGCTGC+CGG 0.566719 6.2:-1724185 MS.gene053003:CDS
CAGAGCTTGATATCTTTCAC+CGG 0.583324 6.2:-1724205 MS.gene053003:CDS
AAAGCATTTGAGGGCTGTCG+TGG 0.583556 6.2:-1721320 MS.gene053003:CDS
TGAAGCAGAGAAGCTAGCAA+AGG 0.583651 6.2:-1718812 MS.gene053003:CDS
AGTTATGCAGACTCATGTCT+AGG 0.584860 6.2:-1718711 MS.gene053003:CDS
TCCAGAGAGACCAGCAGGGT+CGG 0.604189 6.2:+1721274 None:intergenic
ATTCATTGCTCCAAGAGCCA+TGG 0.606073 6.2:+1719991 None:intergenic
ATTTGTCCAGCACTTATCAC+AGG 0.608102 6.2:-1719635 MS.gene053003:CDS
TATCTTTCACCGGAATCTAG+TGG 0.614126 6.2:-1724195 MS.gene053003:CDS
AGTAACCTAAGACCAAAAGA+TGG 0.618500 6.2:+1724030 None:intergenic
CACCGGAGAAAAGACGATGA+AGG 0.622226 6.2:-1724158 MS.gene053003:CDS
CAATGTAACTGAGAATGTGA+TGG 0.623543 6.2:-1720123 MS.gene053003:CDS
ACTACTCCTATTATTAACCA+TGG 0.632241 6.2:-1720008 MS.gene053003:CDS
AGCAGGGTCGGTAAATGCAG+AGG 0.646459 6.2:+1721286 None:intergenic
GCCTAAAGAAAAGATATGTG+GGG 0.665039 6.2:-1718779 MS.gene053003:CDS
ACCTTGGTTTGTGTCACTAG+TGG 0.672627 6.2:-1724083 MS.gene053003:CDS
TGTATCCAGAGAGACCAGCA+GGG 0.693157 6.2:+1721270 None:intergenic
ACCACTAGTGACACAAACCA+AGG 0.694749 6.2:+1724082 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTATTTTTTATTAA+AGG - chr6.2:1719916-1719935 MS.gene053003:intron 0.0%
!! AATTAAACACTTATTAAATT+TGG + chr6.2:1722496-1722515 None:intergenic 10.0%
!! ATTAAACACTTATTAAATTT+GGG + chr6.2:1722495-1722514 None:intergenic 10.0%
!! ATTTCATAAATTATTCTATT+TGG + chr6.2:1719884-1719903 None:intergenic 10.0%
!! TGAATATATATAATATAAGT+CGG + chr6.2:1720283-1720302 None:intergenic 10.0%
!! TTATAATATATAGAAATCAA+TGG - chr6.2:1722764-1722783 MS.gene053003:intron 10.0%
!! TTGATTAATAAACTAAAATA+TGG + chr6.2:1723401-1723420 None:intergenic 10.0%
!!! TAAGTTTTTTTTTTTTTTTG+AGG + chr6.2:1720734-1720753 None:intergenic 10.0%
!!! TTTTAGTAATTTTCAAATAT+TGG + chr6.2:1721916-1721935 None:intergenic 10.0%
!!! TTTTTACTTTTTTTTTTGAA+CGG + chr6.2:1723585-1723604 None:intergenic 10.0%
!! AAAATGTTAGTAAATTTATG+TGG - chr6.2:1719440-1719459 MS.gene053003:intron 15.0%
!! AAATATTGCTTTGTATTATA+TGG - chr6.2:1723181-1723200 MS.gene053003:intron 15.0%
!! AAATGTTAGTAAATTTATGT+GGG - chr6.2:1719441-1719460 MS.gene053003:intron 15.0%
!! AATAAATAAGGATATGAATT+TGG + chr6.2:1719024-1719043 None:intergenic 15.0%
!! AATTAATAGTATATTGAGAT+AGG - chr6.2:1721116-1721135 MS.gene053003:intron 15.0%
!! AATTATAACACTATCTAATA+TGG - chr6.2:1721178-1721197 MS.gene053003:intron 15.0%
!! ACATTACTAGTAAAAATAAT+TGG - chr6.2:1723559-1723578 MS.gene053003:intron 15.0%
!! ATAACATATTAACTTTAACT+TGG - chr6.2:1722658-1722677 MS.gene053003:intron 15.0%
!! ATTATAACACTATCTAATAT+GGG - chr6.2:1721179-1721198 MS.gene053003:intron 15.0%
!! CTATAAACCTTAAATAAATA+AGG + chr6.2:1719036-1719055 None:intergenic 15.0%
!! TAAATTAAATCATGATTTGA+AGG - chr6.2:1723126-1723145 MS.gene053003:intron 15.0%
!! TAATCTTAAATGTTACAATA+AGG - chr6.2:1722103-1722122 MS.gene053003:intron 15.0%
!! TATAAAACAAAATTGTAAGT+TGG - chr6.2:1719367-1719386 MS.gene053003:intron 15.0%
!! TGATATTATCATATAATTTG+TGG - chr6.2:1721142-1721161 MS.gene053003:intron 15.0%
!! TTGTAATTAATTAATAATGC+AGG - chr6.2:1721486-1721505 MS.gene053003:intron 15.0%
!!! AAATTTGTTTACATTGTATT+AGG - chr6.2:1723499-1723518 MS.gene053003:intron 15.0%
!!! AACTTTAGAATTAAAATTAG+TGG - chr6.2:1719544-1719563 MS.gene053003:intron 15.0%
!!! AAGTATTGATTAAAAGATTA+AGG + chr6.2:1722995-1723014 None:intergenic 15.0%
!!! ATCATGATTTAATTTAACTA+TGG + chr6.2:1723122-1723141 None:intergenic 15.0%
!!! ATGAAATATTTTACGATAAT+TGG + chr6.2:1722162-1722181 None:intergenic 15.0%
!!! ATGTAACATAATTTTGAAAA+GGG - chr6.2:1720889-1720908 MS.gene053003:intron 15.0%
!!! TTCATATCCTTATTTATTTA+AGG - chr6.2:1719026-1719045 MS.gene053003:intron 15.0%
!! AAAAAATTAAATGCAAATGC+AGG - chr6.2:1723944-1723963 MS.gene053003:intron 20.0%
!! AAAATAACCTAAACACTATA+CGG - chr6.2:1719965-1719984 MS.gene053003:intron 20.0%
!! AAGACAGTAAAATATGATAT+GGG - chr6.2:1719775-1719794 MS.gene053003:intron 20.0%
!! AATCGAACTTGATTAAATTA+CGG + chr6.2:1722010-1722029 None:intergenic 20.0%
!! AGTTAATATGTTATCTGTAA+AGG + chr6.2:1722652-1722671 None:intergenic 20.0%
!! ATACTTTAAATAAACTAGAC+TGG - chr6.2:1723009-1723028 MS.gene053003:intron 20.0%
!! ATAGAGAAATTTAGAGAAAT+AGG - chr6.2:1721513-1721532 MS.gene053003:intron 20.0%
!! GATATGATATATGATATAGT+TGG - chr6.2:1721463-1721482 MS.gene053003:intron 20.0%
!! GTAGTACTTCAAATATAATA+AGG - chr6.2:1722530-1722549 MS.gene053003:intron 20.0%
!! TAAAATATGGAACAAGAAAT+TGG + chr6.2:1723388-1723407 None:intergenic 20.0%
!! TAAGACAGTAAAATATGATA+TGG - chr6.2:1719774-1719793 MS.gene053003:intron 20.0%
!! TAGTTTATCTTGATGAAATA+TGG - chr6.2:1719414-1719433 MS.gene053003:intron 20.0%
!!! AAAAGTTTGAACTTTTTTGA+AGG - chr6.2:1720969-1720988 MS.gene053003:intron 20.0%
!!! AACATATGATTTTCTTTTCA+TGG - chr6.2:1719279-1719298 MS.gene053003:intron 20.0%
!!! AAGAACTAGTTTTTTTTTCA+TGG + chr6.2:1718992-1719011 None:intergenic 20.0%
!!! ATTGTAACATTTAAGATTAG+AGG + chr6.2:1722102-1722121 None:intergenic 20.0%
!!! CATGTAACATAATTTTGAAA+AGG - chr6.2:1720888-1720907 MS.gene053003:intron 20.0%
!!! CTTTTCAAAATTATGTTACA+TGG + chr6.2:1720890-1720909 None:intergenic 20.0%
!!! GTTATCTTTTTGTTACATTA+TGG - chr6.2:1719652-1719671 MS.gene053003:CDS 20.0%
!!! TTTGTTGTTGTATTCATTTA+TGG - chr6.2:1721318-1721337 MS.gene053003:CDS 20.0%
! AAAAATAAGAAACTCACATG+TGG - chr6.2:1720626-1720645 MS.gene053003:intron 25.0%
! AAAATTAATGTCCACTAACA+TGG - chr6.2:1721937-1721956 MS.gene053003:intron 25.0%
! AAATTACATTGAAGACAGAA+AGG + chr6.2:1719851-1719870 None:intergenic 25.0%
! AACACTTATTAAATTTGGGT+TGG + chr6.2:1722491-1722510 None:intergenic 25.0%
! AAGAAAAAAAATATGTCCTG+AGG + chr6.2:1719571-1719590 None:intergenic 25.0%
! AATCTATTGAACATATGTAG+TGG + chr6.2:1722417-1722436 None:intergenic 25.0%
! ACATTGAGTTATATAGTCTA+AGG - chr6.2:1721886-1721905 MS.gene053003:intron 25.0%
! ACTTGAATAATCAATATGCA+TGG + chr6.2:1720174-1720193 None:intergenic 25.0%
! AGAAATAAAGAAATCGACAT+AGG + chr6.2:1720663-1720682 None:intergenic 25.0%
! ATAATATGAAAACATGCAAG+AGG - chr6.2:1719331-1719350 MS.gene053003:intron 25.0%
! CCAAACAAACTACTATAATT+TGG - chr6.2:1721362-1721381 MS.gene053003:CDS 25.0%
! GAAATGAAAGAAAATGCTTA+TGG - chr6.2:1724049-1724068 MS.gene053003:CDS 25.0%
! GACCAATTCTTATTCAAAAT+TGG + chr6.2:1720199-1720218 None:intergenic 25.0%
! GCACAAAAAATGTATTCTAA+TGG - chr6.2:1723968-1723987 MS.gene053003:intron 25.0%
! GTTGAATTAGACAACAAATA+AGG + chr6.2:1723100-1723119 None:intergenic 25.0%
! TACTTTATAGATTGTAGATG+TGG - chr6.2:1719601-1719620 MS.gene053003:CDS 25.0%
! TAGTCAAATTACTAGTTCAT+TGG - chr6.2:1721806-1721825 MS.gene053003:intron 25.0%
! TGAAGAGATGAGAAATAATT+TGG - chr6.2:1721539-1721558 MS.gene053003:intron 25.0%
!! AAAACAAAATTGTAAGTTGG+TGG - chr6.2:1719370-1719389 MS.gene053003:intron 25.0%
!! AAAAGTTTAAGCTTTTAGAC+CGG - chr6.2:1720995-1721014 MS.gene053003:intron 25.0%
!! AAGAAGATATTTTTCCTCAA+AGG + chr6.2:1722287-1722306 None:intergenic 25.0%
!! AGAAGATATTTTTCCTCAAA+GGG + chr6.2:1722286-1722305 None:intergenic 25.0%
!! CTCCAATTTTGAATAAGAAT+TGG - chr6.2:1720194-1720213 MS.gene053003:intron 25.0%
!! CTTTCTACTCAATTCTATTT+TGG + chr6.2:1721277-1721296 None:intergenic 25.0%
!! TAAAGGTCAACTGAATATTT+TGG - chr6.2:1719933-1719952 MS.gene053003:intron 25.0%
!! TATGATTTTCTTTTCATGGT+AGG - chr6.2:1719283-1719302 MS.gene053003:intron 25.0%
!!! AAAAACAGTTTTGTTCATGA+GGG - chr6.2:1719233-1719252 MS.gene053003:intron 25.0%
!!! AACACACATCTTTTAATTGA+AGG + chr6.2:1722843-1722862 None:intergenic 25.0%
!!! CCAAATTATAGTAGTTTGTT+TGG + chr6.2:1721365-1721384 None:intergenic 25.0%
!!! TGTGAGTTTCTTATTTTTTC+TGG + chr6.2:1720624-1720643 None:intergenic 25.0%
!!! TGTTTTAAAAATCGACTATG+TGG - chr6.2:1721756-1721775 MS.gene053003:intron 25.0%
AACATCTTCATCATCTAAAG+AGG + chr6.2:1718814-1718833 None:intergenic 30.0%
AACTTATAATGTCTCATAGC+CGG + chr6.2:1721017-1721036 None:intergenic 30.0%
AAGAAATTGGACAATGACTT+TGG + chr6.2:1723375-1723394 None:intergenic 30.0%
AATAAAGAAATCGACATAGG+TGG + chr6.2:1720660-1720679 None:intergenic 30.0%
AATGACTAAATCATGTGACT+CGG - chr6.2:1721850-1721869 MS.gene053003:intron 30.0%
AATTAAAATTAGTGGTCCTC+AGG - chr6.2:1719552-1719571 MS.gene053003:intron 30.0%
AATTGAGTAGAAAGCTAGTT+AGG - chr6.2:1721283-1721302 MS.gene053003:CDS 30.0%
AATTTGATGTAGTGAGAAAG+TGG - chr6.2:1722370-1722389 MS.gene053003:intron 30.0%
ACCAAAAAAGTGGAGAAAAA+TGG + chr6.2:1720049-1720068 None:intergenic 30.0%
ACTACTCCTATTATTAACCA+TGG - chr6.2:1722915-1722934 MS.gene053003:intron 30.0%
AGTCACATGATTTAGTCATT+GGG + chr6.2:1721850-1721869 None:intergenic 30.0%
ATAAAGAAATCGACATAGGT+GGG + chr6.2:1720659-1720678 None:intergenic 30.0%
ATGCCTAAAGAAAAGATATG+TGG - chr6.2:1724142-1724161 MS.gene053003:CDS 30.0%
ATTCCCTTTAGTGTCAATTT+CGG - chr6.2:1723700-1723719 MS.gene053003:intron 30.0%
CAAATTCCAACAACTTTGTA+GGG - chr6.2:1719508-1719527 MS.gene053003:intron 30.0%
GGTTAATAATAGGAGTAGTA+AGG + chr6.2:1722914-1722933 None:intergenic 30.0%
GTAGCATTATATTGAGTTTG+TGG - chr6.2:1720843-1720862 MS.gene053003:intron 30.0%
GTAGGTATGATAGAAATAGA+GGG - chr6.2:1719463-1719482 MS.gene053003:intron 30.0%
GTTAGTAAATTTATGTGGGT+AGG - chr6.2:1719445-1719464 MS.gene053003:intron 30.0%
TACAAAGTTGTTGGAATTTG+CGG + chr6.2:1719508-1719527 None:intergenic 30.0%
TACGAAAAAGACCAAAAAAG+TGG + chr6.2:1720059-1720078 None:intergenic 30.0%
TCTTTAGATGATGAAGATGT+TGG - chr6.2:1718813-1718832 MS.gene053003:CDS 30.0%
TGCCTAAAGAAAAGATATGT+GGG - chr6.2:1724143-1724162 MS.gene053003:CDS 30.0%
TGTTACATTATGGTAGAGTT+TGG - chr6.2:1719662-1719681 MS.gene053003:CDS 30.0%
TTATCATCTGAGCTAAATTG+CGG - chr6.2:1719201-1719220 MS.gene053003:intron 30.0%
TTGAGTTATATAGTCTAAGG+TGG - chr6.2:1721889-1721908 MS.gene053003:intron 30.0%
TTGGTTACATAATACCTTTG+AGG + chr6.2:1723356-1723375 None:intergenic 30.0%
TTTCTACGTGTTTGATCATA+TGG - chr6.2:1720318-1720337 MS.gene053003:intron 30.0%
TTTGTATTATATGGCAGCTA+TGG - chr6.2:1723190-1723209 MS.gene053003:intron 30.0%
! AAAGTGCCATTCATATTATG+TGG + chr6.2:1722333-1722352 None:intergenic 30.0%
! AACAGTTGATGTAAAGAAAG+TGG - chr6.2:1724000-1724019 MS.gene053003:intron 30.0%
! AGTAAAAACCCATTTGAAGT+TGG - chr6.2:1723623-1723642 MS.gene053003:intron 30.0%
! GTCAAAAGTTTAAAGTTGCA+AGG + chr6.2:1722621-1722640 None:intergenic 30.0%
! TAATTGATTCCTACATCATG+TGG - chr6.2:1722575-1722594 MS.gene053003:intron 30.0%
! TATAATGCTACTTAAGCAAG+TGG + chr6.2:1720834-1720853 None:intergenic 30.0%
! TCTTTGAAAGTAGAAGTTTG+TGG + chr6.2:1722133-1722152 None:intergenic 30.0%
! TGATTAGTCACATACATTGA+GGG + chr6.2:1720810-1720829 None:intergenic 30.0%
! TTGATTAGTCACATACATTG+AGG + chr6.2:1720811-1720830 None:intergenic 30.0%
!! ATGAATGGCACTTTTTGTAT+TGG - chr6.2:1722339-1722358 MS.gene053003:intron 30.0%
!! GCTAAATGATGTTGATAGTT+TGG - chr6.2:1721578-1721597 MS.gene053003:intron 30.0%
!! TGAATGGCACTTTTTGTATT+GGG - chr6.2:1722340-1722359 MS.gene053003:intron 30.0%
!!! GAAAAACAGTTTTGTTCATG+AGG - chr6.2:1719232-1719251 MS.gene053003:intron 30.0%
!!! GTGAATTGTGAGCTTTTTTT+GGG + chr6.2:1720590-1720609 None:intergenic 30.0%
!!! TGTGAATTGTGAGCTTTTTT+TGG + chr6.2:1720591-1720610 None:intergenic 30.0%
!!! TTTTTGAAGTGTTAGTCCAT+AGG - chr6.2:1722183-1722202 MS.gene053003:intron 30.0%
AAGCTCACAATTCACATATG+TGG - chr6.2:1720595-1720614 MS.gene053003:intron 35.0%
AATCAAACCAATCGACGAAT+TGG + chr6.2:1723069-1723088 None:intergenic 35.0%
ACCCTACCACATAATATGAA+TGG - chr6.2:1722324-1722343 MS.gene053003:intron 35.0%
ACTAGTGGTGTTTCTTATCT+GGG - chr6.2:1718855-1718874 MS.gene053003:CDS 35.0%
ACTTATAAGAGCCATGTTAG+TGG + chr6.2:1721951-1721970 None:intergenic 35.0%
AGTAACCTAAGACCAAAAGA+TGG + chr6.2:1718896-1718915 None:intergenic 35.0%
ATCACTCTGCATAGACAAAA+AGG - chr6.2:1722953-1722972 MS.gene053003:intron 35.0%
ATGAAACCCTACAAAGTTGT+TGG + chr6.2:1719517-1719536 None:intergenic 35.0%
CAAAGAAAAACACGTGAACT+AGG + chr6.2:1719076-1719095 None:intergenic 35.0%
CAAGAGCCATGGTTAATAAT+AGG + chr6.2:1722924-1722943 None:intergenic 35.0%
CAATGTAACTGAGAATGTGA+TGG - chr6.2:1722800-1722819 MS.gene053003:intron 35.0%
CTATTATTAACCATGGCTCT+TGG - chr6.2:1722922-1722941 MS.gene053003:intron 35.0%
GACTTATAAAGATGGTCTAC+CGG - chr6.2:1722215-1722234 MS.gene053003:intron 35.0%
GAGTCACATGATTTAGTCAT+TGG + chr6.2:1721851-1721870 None:intergenic 35.0%
GAGTTTCAAACCTCTTTCTT+TGG + chr6.2:1723262-1723281 None:intergenic 35.0%
GCAAATTCCAACAACTTTGT+AGG - chr6.2:1719507-1719526 MS.gene053003:intron 35.0%
GCCATTCATATTATGTGGTA+GGG + chr6.2:1722328-1722347 None:intergenic 35.0%
GCCTAAAGAAAAGATATGTG+GGG - chr6.2:1724144-1724163 MS.gene053003:CDS 35.0%
GGTAGGTATGATAGAAATAG+AGG - chr6.2:1719462-1719481 MS.gene053003:intron 35.0%
GTCTCAGTCGTAAAATTGAA+AGG + chr6.2:1721988-1722007 None:intergenic 35.0%
TAAAGAAATCGACATAGGTG+GGG + chr6.2:1720658-1720677 None:intergenic 35.0%
TAAGAAAGAGAAACCAACCT+GGG + chr6.2:1718941-1718960 None:intergenic 35.0%
TAGCTGACGACTTATAAAGA+TGG - chr6.2:1722207-1722226 MS.gene053003:intron 35.0%
TGAAGATGTTGGAAAAACCT+TGG - chr6.2:1718824-1718843 MS.gene053003:CDS 35.0%
TGCCATTCATATTATGTGGT+AGG + chr6.2:1722329-1722348 None:intergenic 35.0%
TTAAGAAAGAGAAACCAACC+TGG + chr6.2:1718942-1718961 None:intergenic 35.0%
TTATCTTCTCCTTTACAAGC+TGG + chr6.2:1721089-1721108 None:intergenic 35.0%
TTGCTACGAGAAACTATGAT+CGG - chr6.2:1720413-1720432 MS.gene053003:intron 35.0%
! ATTGAAGTTTGCTCCTCTTA+AGG - chr6.2:1723666-1723685 MS.gene053003:intron 35.0%
! TACTCACTAAAGCACCTAAT+TGG + chr6.2:1724238-1724257 None:intergenic 35.0%
! TCCCCACATATCTTTTCTTT+AGG + chr6.2:1724148-1724167 None:intergenic 35.0%
!! AATTGTAAGTTGGTGGCAAT+TGG - chr6.2:1719377-1719396 MS.gene053003:intron 35.0%
!! AGCTAGCTCTGACTTTAAAT+GGG - chr6.2:1723740-1723759 MS.gene053003:intron 35.0%
!! AGTTTGGAGAAAGCATTTGA+GGG - chr6.2:1721594-1721613 MS.gene053003:intron 35.0%
!! GGATTAGTCGATTCTTAGAT+CGG - chr6.2:1723797-1723816 MS.gene053003:intron 35.0%
!! GGTTATAGTCTTGTAGACTT+TGG - chr6.2:1722391-1722410 MS.gene053003:intron 35.0%
!! GTTGAGATTAGTCTCATAGT+CGG - chr6.2:1720943-1720962 MS.gene053003:intron 35.0%
!! TAGTTTGGAGAAAGCATTTG+AGG - chr6.2:1721593-1721612 MS.gene053003:intron 35.0%
!! TGTGAAGAAGAAAGTATTGC+AGG - chr6.2:1719146-1719165 MS.gene053003:intron 35.0%
!!! GCCATTTTTCTCCACTTTTT+TGG - chr6.2:1720045-1720064 MS.gene053003:CDS 35.0%
!!! GCTTTTTTTCCACATGATGT+AGG + chr6.2:1722587-1722606 None:intergenic 35.0%
AAATCGACCAATTCGTCGAT+TGG - chr6.2:1723059-1723078 MS.gene053003:intron 40.0%
AACATGTGACTATGTGAGTG+TGG - chr6.2:1720005-1720024 MS.gene053003:CDS 40.0%
AATGAGATCCGCTATCGAAT+TGG + chr6.2:1723157-1723176 None:intergenic 40.0%
AGGTAAGCAATTGATGCTGT+TGG + chr6.2:1723336-1723355 None:intergenic 40.0%
AGTCATTGGGCTCAATAATG+TGG + chr6.2:1721837-1721856 None:intergenic 40.0%
AGTTATGCAGACTCATGTCT+AGG - chr6.2:1724212-1724231 MS.gene053003:CDS 40.0%
ATAAACTAGACTGGACCGAT+CGG - chr6.2:1723018-1723037 MS.gene053003:intron 40.0%
ATAAGTCGTCAGCTATCCTA+TGG + chr6.2:1722202-1722221 None:intergenic 40.0%
ATTTGTCCAGCACTTATCAC+AGG - chr6.2:1723288-1723307 MS.gene053003:intron 40.0%
CAATATTCCAAGTCAACCAC+TGG + chr6.2:1723650-1723669 None:intergenic 40.0%
CACTAGTGGTGTTTCTTATC+TGG - chr6.2:1718854-1718873 MS.gene053003:CDS 40.0%
CAGAGCTTGATATCTTTCAC+CGG - chr6.2:1718718-1718737 MS.gene053003:CDS 40.0%
CATCACTAGCTGCTTGTATT+TGG - chr6.2:1722868-1722887 MS.gene053003:intron 40.0%
CCACCGAAATTGACACTAAA+GGG + chr6.2:1723706-1723725 None:intergenic 40.0%
CCTTTAGTGTCAATTTCGGT+GGG - chr6.2:1723704-1723723 MS.gene053003:intron 40.0%
CGAATAATTGTTGACAACCC+AGG - chr6.2:1718921-1718940 MS.gene053003:CDS 40.0%
GAGAAGCTAGCAAAGGATAT+TGG - chr6.2:1724118-1724137 MS.gene053003:CDS 40.0%
GCATCAATTGCTTACCTCAA+AGG - chr6.2:1723339-1723358 MS.gene053003:intron 40.0%
GGGTTCCTATGACAAAATTC+AGG + chr6.2:1723315-1723334 None:intergenic 40.0%
GGTAAGCAATTGATGCTGTT+GGG + chr6.2:1723335-1723354 None:intergenic 40.0%
TAAGAATCGACTAATCCGAG+AGG + chr6.2:1723794-1723813 None:intergenic 40.0%
TAATTGTTGACAACCCAGGT+TGG - chr6.2:1718925-1718944 MS.gene053003:CDS 40.0%
TATCTTTCACCGGAATCTAG+TGG - chr6.2:1718728-1718747 MS.gene053003:CDS 40.0%
TGGAGAATAGCCAAAGAAAG+AGG - chr6.2:1723249-1723268 MS.gene053003:intron 40.0%
TTCTCGTAGCAACACTCTTT+GGG + chr6.2:1720405-1720424 None:intergenic 40.0%
TTCTTATCTGGGTCTTGCTT+TGG - chr6.2:1718866-1718885 MS.gene053003:CDS 40.0%
TTTCTCGTAGCAACACTCTT+TGG + chr6.2:1720406-1720425 None:intergenic 40.0%
! ATCCTTCATCGTCTTTTCTC+CGG + chr6.2:1718770-1718789 None:intergenic 40.0%
! CAGGTCCTGAATTTTGTCAT+AGG - chr6.2:1723307-1723326 MS.gene053003:intron 40.0%
! TGCTTTGGTCAACCATCTTT+TGG - chr6.2:1718881-1718900 MS.gene053003:CDS 40.0%
! TTTTTCCTCAAAGGGACTTC+AGG + chr6.2:1722278-1722297 None:intergenic 40.0%
!! ACATACATTGAGGGCATCTA+GGG + chr6.2:1720801-1720820 None:intergenic 40.0%
!! GAGCTAGCTCTGACTTTAAA+TGG - chr6.2:1723739-1723758 MS.gene053003:intron 40.0%
!! GTCAACCATCTTTTGGTCTT+AGG - chr6.2:1718888-1718907 MS.gene053003:CDS 40.0%
!! TGTGATAAGTGCTGGACAAA+TGG + chr6.2:1723289-1723308 None:intergenic 40.0%
ACCACTAGTGACACAAACCA+AGG + chr6.2:1718844-1718863 None:intergenic 45.0%
ACCACTGGACCAACTTCAAA+TGG + chr6.2:1723635-1723654 None:intergenic 45.0%
AGCACATGCATGTGTGTTCA+AGG - chr6.2:1724027-1724046 MS.gene053003:CDS 45.0%
AGGCAAGATGAGAGCAGAAA+AGG - chr6.2:1723221-1723240 MS.gene053003:intron 45.0%
AGGGTGTACACATTGCCAAA+AGG + chr6.2:1722241-1722260 None:intergenic 45.0%
AGGTCTCACCAATTCGATAG+CGG - chr6.2:1723146-1723165 MS.gene053003:intron 45.0%
ATCGAACCTGAGACCTTAAG+AGG + chr6.2:1723682-1723701 None:intergenic 45.0%
ATTCATTGCTCCAAGAGCCA+TGG + chr6.2:1722935-1722954 None:intergenic 45.0%
CCACTGGACCAACTTCAAAT+GGG + chr6.2:1723634-1723653 None:intergenic 45.0%
CCCACCGAAATTGACACTAA+AGG + chr6.2:1723707-1723726 None:intergenic 45.0%
CCCTTTAGTGTCAATTTCGG+TGG - chr6.2:1723703-1723722 MS.gene053003:intron 45.0%
CCTAGTACCTCTGTTTGAGT+CGG + chr6.2:1721782-1721801 None:intergenic 45.0%
CGTTGTGCCGTATAGTGTTT+AGG + chr6.2:1719975-1719994 None:intergenic 45.0%
GACTATGTGAGTGTGGTGTA+GGG - chr6.2:1720012-1720031 MS.gene053003:CDS 45.0%
GACTCATGTCTAGGCCAATT+AGG - chr6.2:1724221-1724240 MS.gene053003:CDS 45.0%
TCTCAACCAGTTGAACCGAT+CGG + chr6.2:1723036-1723055 None:intergenic 45.0%
TGAAGCAGAGAAGCTAGCAA+AGG - chr6.2:1724111-1724130 MS.gene053003:CDS 45.0%
TGACTATGTGAGTGTGGTGT+AGG - chr6.2:1720011-1720030 MS.gene053003:CDS 45.0%
TGGCAGCTATGGTATGCATT+AGG - chr6.2:1723201-1723220 MS.gene053003:intron 45.0%
TGTACACATTGCCAAAAGGC+CGG + chr6.2:1722237-1722256 None:intergenic 45.0%
TTTGCTCCTCTTAAGGTCTC+AGG - chr6.2:1723673-1723692 MS.gene053003:intron 45.0%
! ATCGGTTCAACTGGTTGAGA+TGG - chr6.2:1723036-1723055 MS.gene053003:intron 45.0%
!! AAGTCAGAGCTAGCTCTGTA+TGG + chr6.2:1723735-1723754 None:intergenic 45.0%
!! ACCTTGGTTTGTGTCACTAG+TGG - chr6.2:1718840-1718859 MS.gene053003:CDS 45.0%
!! CACATACATTGAGGGCATCT+AGG + chr6.2:1720802-1720821 None:intergenic 45.0%
!! AAAATAAAATAAAAAACTAT+TGG - chr6.2:1723833-1723852 MS.gene053003:intron 5.0%
!!! TTTATTTTATTTTTAAAACT+CGG + chr6.2:1723826-1723845 None:intergenic 5.0%
AGTTGGTCCAGTGGTTGACT+TGG - chr6.2:1723640-1723659 MS.gene053003:intron 50.0%
CACCGGAGAAAAGACGATGA+AGG - chr6.2:1718765-1718784 MS.gene053003:CDS 50.0%
TCAGGACCTGTGATAAGTGC+TGG + chr6.2:1723297-1723316 None:intergenic 50.0%
TCCTCAAAGGGACTTCAGGT+TGG + chr6.2:1722274-1722293 None:intergenic 50.0%
TGAGAGCAGAAAAGGCTGCT+TGG - chr6.2:1723229-1723248 MS.gene053003:intron 50.0%
TGCATGCTGCCAGCTTGTAA+AGG - chr6.2:1721077-1721096 MS.gene053003:intron 50.0%
TGTATCCAGAGAGACCAGCA+GGG + chr6.2:1721656-1721675 None:intergenic 50.0%
! AAAGCATTTGAGGGCTGTCG+TGG - chr6.2:1721603-1721622 MS.gene053003:intron 50.0%
! AAGATGGTCTACCGGCCTTT+TGG - chr6.2:1722223-1722242 MS.gene053003:intron 50.0%
! CCCATTTGAAGTTGGTCCAG+TGG - chr6.2:1723631-1723650 MS.gene053003:intron 50.0%
! GTCTTTTCTCCGGTGTATGC+CGG + chr6.2:1718760-1718779 None:intergenic 50.0%
! TATGTGGCCGACTCAAACAG+AGG - chr6.2:1721772-1721791 MS.gene053003:intron 50.0%
!! AAAGGGACTTCAGGTTGGCA+GGG + chr6.2:1722269-1722288 None:intergenic 50.0%
!! CCGACTCAAACAGAGGTACT+AGG - chr6.2:1721779-1721798 MS.gene053003:intron 50.0%
!! TGAGGGCATCTAGGGTTTAG+TGG + chr6.2:1720793-1720812 None:intergenic 50.0%
AATTCCACCGTCCACTTGCG+GGG + chr6.2:1723768-1723787 None:intergenic 55.0%
AGCAGGGTCGGTAAATGCAG+AGG + chr6.2:1721640-1721659 None:intergenic 55.0%
CAATTCCACCGTCCACTTGC+GGG + chr6.2:1723769-1723788 None:intergenic 55.0%
CCAATTCCACCGTCCACTTG+CGG + chr6.2:1723770-1723789 None:intergenic 55.0%
GACGGTGGAATTGGTCCTCT+CGG - chr6.2:1723776-1723795 MS.gene053003:intron 55.0%
GCCAACCTGAAGTCCCTTTG+AGG - chr6.2:1722270-1722289 MS.gene053003:intron 55.0%
GTGTATCCAGAGAGACCAGC+AGG + chr6.2:1721657-1721676 None:intergenic 55.0%
TCTGCATTTACCGACCCTGC+TGG - chr6.2:1721639-1721658 MS.gene053003:intron 55.0%
TGTGGTGTAGGGCACACGTA+GGG - chr6.2:1720023-1720042 MS.gene053003:CDS 55.0%
TTAAATGGGACCCCCGCAAG+TGG - chr6.2:1723754-1723773 MS.gene053003:intron 55.0%
! ACTGGACCGATCGGTTCAAC+TGG - chr6.2:1723027-1723046 MS.gene053003:intron 55.0%
!! CAAAGGGACTTCAGGTTGGC+AGG + chr6.2:1722270-1722289 None:intergenic 55.0%
!! TCAGGTTGGCAGGGTTCGTA+GGG + chr6.2:1722260-1722279 None:intergenic 55.0%
!! TTCAGGTTGGCAGGGTTCGT+AGG + chr6.2:1722261-1722280 None:intergenic 55.0%
ATTCCACCGTCCACTTGCGG+GGG + chr6.2:1723767-1723786 None:intergenic 60.0%
CCGCAAGTGGACGGTGGAAT+TGG - chr6.2:1723767-1723786 MS.gene053003:intron 60.0%
CGGAATCTAGTGGCTGCTGC+CGG - chr6.2:1718738-1718757 MS.gene053003:CDS 60.0%
CGGCAGCAGCCACTAGATTC+CGG + chr6.2:1718740-1718759 None:intergenic 60.0%
GTGTGGTGTAGGGCACACGT+AGG - chr6.2:1720022-1720041 MS.gene053003:CDS 60.0%
TCCAGAGAGACCAGCAGGGT+CGG + chr6.2:1721652-1721671 None:intergenic 60.0%
ATGGGACCCCCGCAAGTGGA+CGG - chr6.2:1723758-1723777 MS.gene053003:intron 65.0%
TGGCTGCTGCCGGCATACAC+CGG - chr6.2:1718748-1718767 MS.gene053003:CDS 65.0%
! ACCGACCCTGCTGGTCTCTC+TGG - chr6.2:1721648-1721667 MS.gene053003:intron 65.0%
GGACCCCCGCAAGTGGACGG+TGG - chr6.2:1723761-1723780 MS.gene053003:intron 75.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 1718684 1724261 1718684 ID=MS.gene053003
chr6.2 mRNA 1718684 1724261 1718684 ID=MS.gene053003.t1;Parent=MS.gene053003
chr6.2 exon 1724003 1724261 1724003 ID=MS.gene053003.t1.exon1;Parent=MS.gene053003.t1
chr6.2 CDS 1724003 1724261 1724003 ID=cds.MS.gene053003.t1;Parent=MS.gene053003.t1
chr6.2 exon 1721268 1721437 1721268 ID=MS.gene053003.t1.exon2;Parent=MS.gene053003.t1
chr6.2 CDS 1721268 1721437 1721268 ID=cds.MS.gene053003.t1;Parent=MS.gene053003.t1
chr6.2 exon 1719971 1720168 1719971 ID=MS.gene053003.t1.exon3;Parent=MS.gene053003.t1
chr6.2 CDS 1719971 1720168 1719971 ID=cds.MS.gene053003.t1;Parent=MS.gene053003.t1
chr6.2 exon 1719585 1719738 1719585 ID=MS.gene053003.t1.exon4;Parent=MS.gene053003.t1
chr6.2 CDS 1719585 1719738 1719585 ID=cds.MS.gene053003.t1;Parent=MS.gene053003.t1
chr6.2 exon 1718684 1718979 1718684 ID=MS.gene053003.t1.exon5;Parent=MS.gene053003.t1
chr6.2 CDS 1718684 1718979 1718684 ID=cds.MS.gene053003.t1;Parent=MS.gene053003.t1
Gene Sequence

>MS.gene053003

ATGGGTGTTGTACGTACATGTGAAATTAAGAGATCAGAGCTTGATATCTTTCACCGGAATCTAGTGGCTGCTGCCGGCATACACCGGAGAAAAGACGATGAAGGATTAAGAAAAAACAACGTATTTTCCTCTTTAGATGATGAAGATGTTGGAAAAACCTTGGTTTGTGTCACTAGTGGTGTTTCTTATCTGGGTCTTGCTTTGGTCAACCATCTTTTGGTCTTAGGTTACTCTGTTCGAATAATTGTTGACAACCCAGGTTGGTTTCTCTTTCTTAATTTCTTCTAAGTTTCATTTTTCTTAATCCATGAAAAAAAAACTAGTTCTTTGATTTGTTCCAAATTCATATCCTTATTTATTTAAGGTTTATAGTTGTTCTTTATGTTTTTCCTAGTTCACGTGTTTTTCTTTGAAAAAAAAATTATCTCAAAGAGTCGAACAACAAAATTTACACACATTAAATGTGAAGAAGAAAGTATTGCAGGCGTCACAACATATTAAATGTTCTTACAATATTTTATCATCTGAGCTAAATTGCGGAAAAAAATGAAAAACAGTTTTGTTCATGAGGGTGTTGAGTAAAAATAGTTTTCACAACATATGATTTTCTTTTCATGGTAGGTGAGAGCAAGAAAATGTGAATAATAATAATATGAAAACATGCAAGAGGATTAAAATATAAATATAAAACAAAATTGTAAGTTGGTGGCAATTGGCAAAGTGACAATGTTAGTTTATCTTGATGAAATATGGTTTAAAATGTTAGTAAATTTATGTGGGTAGGTATGATAGAAATAGAGGGAAATTCAGCAAAAGATGAACCGCAAATTCCAACAACTTTGTAGGGTTTCATTTTGTCAAACTTTAGAATTAAAATTAGTGGTCCTCAGGACATATTTTTTTTCTTCTTATTTACTTACTTTATAGATTGTAGATGTGGATGTTTGTGAGTTATATTTGCTGTTAATGTTATCTTTTTGTTACATTATGGTAGAGTTTGGAAGAAAAATACAATTTATGATTTCTTTTTAGATTGATAAATAACTAAAATTTAAAAAGTATATAAAACGTTGATAAATTTTACATGTGATAAGACAGTAAAATATGATATGGGTGCATAGATACTTGTTTCTTTTTATATTATACATTTTTTTCTTCTTTTCTCCTTTCTGTCTTCAATGTAATTTGTGAAGTCTGCCAAATAGAATAATTTATGAAATCTATTTAGTTAATAAAATTTATTTTTTATTAAAGGTCAACTGAATATTTTGGTCTGTCAACAAAATAACCTAAACACTATACGGCACAACGTGTAACATGTAACATGTGACTATGTGAGTGTGGTGTAGGGCACACGTAGGGCCATTTTTCTCCACTTTTTTGGTCTTTTTCGTACGTACATATGTATAAATTTCAATTTGCAAATTATAACATGAAGAATGTCACGTTTTTATTATTATTTAATTTATGATGATATACAAATACGACCATGCATATTGATTATTCAAGTCTCCAATTTTGAATAAGAATTGGTCTCTTCTTTGAGAGATTTTTTTTGACGAATCTTTCTTGAAAGATATGTATACTTAAAAATAGCCGACTTATATTATATATATTCATATATATTCATATAGTTTCTACGTGTTTGATCATATGGTTTATTTTAATCATGCACTATCTTTATACATGTAGTTTATTTATTATTTTGTTCACGAACACCCAAAGAGTGTTGCTACGAGAAACTATGATCGGTGAATTAAGATAATTTTTCAAGAGAAAATTTTTGCGTAATGTTTTGATTTTATTTTATTTTTTAAACATTGTGTGTGTAATGTTTTGTAGACTATATAGTATAATAAATATTTACACAACATGAAACGAAAGCTCACGTGACTCACACACACCCAAAAAAAGCTCACAATTCACATATGTGGACTCCAGAAAAAATAAGAAACTCACATGTGGATATGACCCCACCTATGTCGATTTCTTTATTTCTTTTCTATGTAAAATCTCTATTATAAATAACTAACTTGATGTCTATTTTCCTCAAAAAAAAAAAAAAACTTAATGTCTATTTTAGTTATTTTTTGTCAAATTTGTTTACCACTAAACCCTAGATGCCCTCAATGTATGTGACTAATCAACCACTTGCTTAAGTAGCATTATATTGAGTTTGTGGCAGAGAATCAATGTTTGATCTCCATGTAACATAATTTTGAAAAGGGACGAAGAACTTTAAACTAATTTAAAACACGAGTTGAGATTAGTCTCATAGTCGGTTTAAAAGTTTGAACTTTTTTGAAGGAAAAAAAGTTTAAGCTTTTAGACCGGCTATGAGACATTATAAGTTAATGATTTTTACACACACTGAATCATATTTTGCTATGTATTGCATGCTGCCAGCTTGTAAAGGAGAAGATAAATAACTTAATTAATAGTATATTGAGATAGGTTTTGATATTATCATATAATTTGTGGTTGTGTTTCATTCAATTATAACACTATCTAATATGGGACTAAATGTTGATAATCATAATTCAAGACGTTTATGCTATATTCAAAGTTTGAGTACACTACTAGAATAATACCAAAATAGAATTGAGTAGAAAGCTAGTTAGGTCTACATTAAAATTTGTTGTTGTATTCATTTATGGTAAACATTGTATTTGAAAAATCCAAACAAACTACTATAATTTGGAAGAATCAATGCAGCTCTATTTTTTAGCTAAAGTATTGTTTTCAATGTTTTGTTGTTTACGTGTACGACATTCAAATTGATATGATATATGATATAGTTGGTTGTAATTAATTAATAATGCAGGAGACATAGAGAAATTTAGAGAAATAGGACATGAAGAGATGAGAAATAATTTGGAAATAATAATTGCAAAGCTAAATGATGTTGATAGTTTGGAGAAAGCATTTGAGGGCTGTCGTGGCATTTTTCATACCTCTGCATTTACCGACCCTGCTGGTCTCTCTGGATACACTGTGAGTTTCTTTCTTTCTTTGTGTTTGTTTGATTAATTATTTGCTTTCTTTTTTCTTTTGTATGCAAAGTTATGTGAGTGTTTTAAAAATCGACTATGTGGCCGACTCAAACAGAGGTACTAGGTCATTAGTCAAATTACTAGTTCATTGGTTGAACCACATTATTGAGCCCAATGACTAAATCATGTGACTCGGTTTTTATAAAATAACATTGAGTTATATAGTCTAAGGTGGACCAATATTTGAAAATTACTAAAAAAAAATTAATGTCCACTAACATGGCTCTTATAAGTAGAAGTTCACAATTCCTTTCAATTTTACGACTGAGACCGTAATTTAATCAAGTTCGATTTGACAAAAAATTGTAAAATAAATCAGTTGAATTTTTAGACATCTATTTATTTGTTTCACTAAATTGATACCTCTAATCTTAAATGTTACAATAAGGAAGACCACAAACTTCTACTTTCAAAGATTAACACCAATTATCGTAAAATATTTCATATTTTTGAAGTGTTAGTCCATAGGATAGCTGACGACTTATAAAGATGGTCTACCGGCCTTTTGGCAATGTGTACACCCTACGAACCCTGCCAACCTGAAGTCCCTTTGAGGAAAAATATCTTCTTTTTGTAATAATTATTTTACCCTACCACATAATATGAATGGCACTTTTTGTATTGGGAGACAAGAATTTGATGTAGTGAGAAAGTGGTTATAGTCTTGTAGACTTTGGCCACTACATATGTTCAATAGATTTAGAACAACTCTAACACTATCTTAAAAGTGACAATGTCAAGTGACTAAAAACCAACCCAAATTTAATAAGTGTTTAATTACTTGTTATATATTGTAGTACTTCAAATATAATAAGGTCTAAAAATCATCTCTTGAAAATAATTGATTCCTACATCATGTGGAAAAAAAGCTTTAATTCTATCCTTGCAACTTTAAACTTTTGACATATCATACCTTTACAGATAACATATTAACTTTAACTTGGTGTAATAATTGTGAGAATTTACACATTAGAAAGTGTTACTATGTTACTATATATGTGTATATATCTAATAAGCAATTACTTATTTATAATATATAGAAATCAATGGCTGAGATTGAAGTCAATGTAACTGAGAATGTGATGGAAGCATGTGCAAGAACACCTTCAATTAAAAGATGTGTGTTAACATCATCACTAGCTGCTTGTATTTGGCAAGACAATGTGAATTCAGACCTTACTACTCCTATTATTAACCATGGCTCTTGGAGCAATGAATCACTCTGCATAGACAAAAAGGTATACATATTTTATGACCTTAATCTTTTAATCAATACTTTAAATAAACTAGACTGGACCGATCGGTTCAACTGGTTGAGATGGAAATCGACCAATTCGTCGATTGGTTTGATTTGCTTATACCTTATTTGTTGTCTAATTCAACCATAGTTAAATTAAATCATGATTTGAAGGTCTCACCAATTCGATAGCGGATCTCATTTTTTAAATATTGCTTTGTATTATATGGCAGCTATGGTATGCATTAGGCAAGATGAGAGCAGAAAAGGCTGCTTGGAGAATAGCCAAAGAAAGAGGTTTGAAACTCACTACCATTTGTCCAGCACTTATCACAGGTCCTGAATTTTGTCATAGGAACCCAACAGCATCAATTGCTTACCTCAAAGGTATTATGTAACCAAAGTCATTGTCCAATTTCTTGTTCCATATTTTAGTTTATTAATCAAATATTGACAATCTAATTTTTTTTTTTGTCTAGATCATACTTTATTATCTTCTTTCAACATAAAATTAATTAAATTATAAAATTTGTTTACATTGTATTAGGATTATTAAATTTAATTGAATATCTGTGTGAAAATTTTACATTACTAGTAAAAATAATTGGCCGTTCAAAAAAAAAAGTAAAAATAATTGATAGAAACTATTAGTAAAAACCCATTTGAAGTTGGTCCAGTGGTTGACTTGGAATATTGAAGTTTGCTCCTCTTAAGGTCTCAGGTTCGATTCCCTTTAGTGTCAATTTCGGTGGGTAAGTCCATACAGAGCTAGCTCTGACTTTAAATGGGACCCCCGCAAGTGGACGGTGGAATTGGTCCTCTCGGATTAGTCGATTCTTAGATCGGATACCGAGTTTTAAAAATAAAATAAAAAACTATTGGTAAATTAGTATATTGTTGTTAACACTAGATGTATGATTTATCTATCTATTTCTAAATTAGACTTTCTTGTAATGACATGTAGAATCTAAAAAAATTAAATGCAAATGCAGGAGCACAAAAAATGTATTCTAATGGTTTGCTAGCAACAGTTGATGTAAAGAAAGTGGCTGAAGCACATGCATGTGTGTTCAAGGAAATGAAAGAAAATGCTTATGGTAGATACATTTGCTTTGATAATGTAATTGATGCTCAAAGTGAAGCAGAGAAGCTAGCAAAGGATATTGGAATGCCTAAAGAAAAGATATGTGGGGATGCATCAAATATTTCTTTGCAAAGATTTGAGCTATCGAATAACAAGTTATGCAGACTCATGTCTAGGCCAATTAGGTGCTTTAGTGAGTATTAG
Protein sequence

>MS.gene053003.t1

MGVVRTCEIKRSELDIFHRNLVAAAGIHRRKDDEGLRKNNVFSSLDDEDVGKTLVCVTSGVSYLGLALVNHLLVLGYSVRIIVDNPGDIEKFREIGHEEMRNNLEIIIAKLNDVDSLEKAFEGCRGIFHTSAFTDPAGLSGYTKSMAEIEVNVTENVMEACARTPSIKRCVLTSSLAACIWQDNVNSDLTTPIINHGSWSNESLCIDKKLWYALGKMRAEKAAWRIAKERGLKLTTICPALITGPEFCHRNPTASIAYLKGAQKMYSNGLLATVDVKKVAEAHACVFKEMKENAYGRYICFDNVIDAQSEAEKLAKDIGMPKEKICGDASNISLQRFELSNNKLCRLMSRPIRCFSEY