Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053815.t1 | XP_003614631.1 | 85.8 | 318 | 19 | 2 | 1 | 296 | 1 | 314 | 9.50E-120 | 439.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053815.t1 | G7K1J5 | 85.8 | 318 | 19 | 2 | 1 | 296 | 1 | 314 | 6.8e-120 | 439.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053815 | MS.gene63043 | 0.890984 | 6.01E-74 | -1.69E-46 |
| MS.gene053815 | MS.gene65682 | 0.887949 | 9.10E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053815.t1 | MTR_5g056480 | 85.535 | 318 | 20 | 2 | 1 | 296 | 1 | 314 | 3.80e-174 | 484 |
| MS.gene053815.t1 | MTR_1g110550 | 35.484 | 279 | 118 | 9 | 1 | 258 | 4 | 241 | 3.63e-39 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053815.t1 | AT1G25400 | 30.241 | 291 | 176 | 9 | 1 | 277 | 1 | 278 | 3.42e-23 | 97.1 |
| MS.gene053815.t1 | AT1G25400 | 30.241 | 291 | 176 | 9 | 1 | 277 | 1 | 278 | 3.42e-23 | 97.1 |
| MS.gene053815.t1 | AT1G68440 | 37.984 | 129 | 67 | 3 | 162 | 287 | 186 | 304 | 3.17e-15 | 75.1 |
Find 68 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTACGGGAAACATTAA+TGG | 0.287710 | 5.1:+44381602 | MS.gene053815:CDS |
| ATCATAATCAAAACTGTTTC+CGG | 0.290235 | 5.1:-44380830 | None:intergenic |
| TCGTTGAGTCTATCGATTAA+TGG | 0.309567 | 5.1:-44380442 | None:intergenic |
| ACGAAGGTGGACGATGAAAA+TGG | 0.314900 | 5.1:-44380635 | None:intergenic |
| TTGCTTTCAATTTCTGCAAA+TGG | 0.333771 | 5.1:+44380557 | MS.gene053815:CDS |
| AACACGCTGCGCGTGGAATC+TGG | 0.336904 | 5.1:+44381430 | MS.gene053815:CDS |
| TGCTTTCAATTTCTGCAAAT+GGG | 0.348348 | 5.1:+44380558 | MS.gene053815:CDS |
| GTAATCTTGCAGTCGAGATA+TGG | 0.356692 | 5.1:+44381347 | MS.gene053815:CDS |
| GACAGTATAGGATTTGGTTT+AGG | 0.399313 | 5.1:+44381196 | MS.gene053815:intron |
| ATCACAACCACTTCTTTCAA+TGG | 0.407260 | 5.1:+44380517 | MS.gene053815:CDS |
| TTGTTACAGATGAATCTTAC+GGG | 0.418397 | 5.1:+44381590 | MS.gene053815:CDS |
| CTTGATGAAGATGACATAGA+AGG | 0.453723 | 5.1:-44380784 | None:intergenic |
| CGCAGCGTGTTCCCCACCTT+GGG | 0.457455 | 5.1:-44381418 | None:intergenic |
| TGAAAGCAATGGAAACGGAT+TGG | 0.472954 | 5.1:-44380543 | None:intergenic |
| TCGTTGTCGAAGGTGATTGA+TGG | 0.476471 | 5.1:-44380676 | None:intergenic |
| GTGATTTGTGAAGGGAAAGA+TGG | 0.477961 | 5.1:-44380499 | None:intergenic |
| TGACGGACGTCAACGTTTGA+CGG | 0.481919 | 5.1:+44381480 | MS.gene053815:CDS |
| TGATTTGTGAAGGGAAAGAT+GGG | 0.488143 | 5.1:-44380498 | None:intergenic |
| GCGCAGCGTGTTCCCCACCT+TGG | 0.488238 | 5.1:-44381419 | None:intergenic |
| AGACTCAACGATTTCCAAGC+AGG | 0.489396 | 5.1:+44380454 | MS.gene053815:CDS |
| GATTTCGATGATTACGAGGA+TGG | 0.489828 | 5.1:+44381223 | MS.gene053815:CDS |
| ATTGTTACAGATGAATCTTA+CGG | 0.491552 | 5.1:+44381589 | MS.gene053815:CDS |
| TTTGCAGAAATTGAAAGCAA+TGG | 0.502375 | 5.1:-44380554 | None:intergenic |
| CCTGCAGAGACTATCACATC+TGG | 0.509613 | 5.1:-44381310 | None:intergenic |
| GCCGTCGGTCGTAGCCGAGT+GGG | 0.511064 | 5.1:+44381393 | MS.gene053815:CDS |
| TAATCTTGCAGTCGAGATAT+GGG | 0.511246 | 5.1:+44381348 | MS.gene053815:CDS |
| GGACGTCAACGTTTGACGGT+TGG | 0.515827 | 5.1:+44381484 | MS.gene053815:CDS |
| TTCGTTATCTTCGTCATCGG+AGG | 0.521784 | 5.1:-44380710 | None:intergenic |
| CATAGACGACAACGTAGTAT+TGG | 0.523774 | 5.1:+44380886 | MS.gene053815:CDS |
| GATGCGGCCGCAGAAGTTGA+AGG | 0.525538 | 5.1:-44381286 | None:intergenic |
| GAAATCATCGTCGTTGTCGA+AGG | 0.525729 | 5.1:-44380686 | None:intergenic |
| GAAATTGAAAGCAATGGAAA+CGG | 0.527809 | 5.1:-44380548 | None:intergenic |
| AACGTGTTCCAAACTCAAAA+CGG | 0.533078 | 5.1:+44380859 | MS.gene053815:CDS |
| AGAAAAGTCAGTGTTCCGTT+AGG | 0.537364 | 5.1:+44381514 | MS.gene053815:CDS |
| AATCTGACGCTGATAATACT+TGG | 0.539054 | 5.1:+44381548 | MS.gene053815:CDS |
| GCAATGAATTAAAACCTGCT+TGG | 0.539211 | 5.1:-44380468 | None:intergenic |
| CGACCGACGGCTTCCGTCGT+CGG | 0.539535 | 5.1:-44381381 | None:intergenic |
| CCGTCGGTCGTAGCCGAGTG+GGG | 0.540475 | 5.1:+44381394 | MS.gene053815:CDS |
| GGTGACTTTGTTGATGATGC+TGG | 0.548195 | 5.1:-44380614 | None:intergenic |
| GGTGGGGAACACGCTGCGCG+TGG | 0.557096 | 5.1:+44381423 | MS.gene053815:CDS |
| ATCTGTAACAATAACAGCAT+CGG | 0.557725 | 5.1:-44381578 | None:intergenic |
| GTGATAGTCTCTGCAGGAGA+AGG | 0.557977 | 5.1:+44381316 | MS.gene053815:CDS |
| TTGGATTCCATTGAAAGAAG+TGG | 0.559863 | 5.1:-44380524 | None:intergenic |
| GCTTTCAATTTCTGCAAATG+GGG | 0.560368 | 5.1:+44380559 | MS.gene053815:CDS |
| TGTTAGTTTATCTTCGTCGT+CGG | 0.561017 | 5.1:+44380744 | MS.gene053815:CDS |
| CCAGATGTGATAGTCTCTGC+AGG | 0.561189 | 5.1:+44381310 | MS.gene053815:CDS |
| GTCGAAGGTGATTGATGGAA+GGG | 0.564506 | 5.1:-44380671 | None:intergenic |
| AAAGTTTATGTCAGAGATGA+CGG | 0.566476 | 5.1:+44381463 | MS.gene053815:CDS |
| GGGACACTCGTCTCCGACGA+CGG | 0.568741 | 5.1:+44381368 | MS.gene053815:CDS |
| CCCCACTCGGCTACGACCGA+CGG | 0.583274 | 5.1:-44381394 | None:intergenic |
| GACTATCACATCTGGTGATG+CGG | 0.585543 | 5.1:-44381302 | None:intergenic |
| CTGACGCTGATAATACTTGG+TGG | 0.585802 | 5.1:+44381551 | MS.gene053815:CDS |
| GAAGTGGTTGTGATTTGTGA+AGG | 0.587206 | 5.1:-44380508 | None:intergenic |
| TGTCGAAGGTGATTGATGGA+AGG | 0.594870 | 5.1:-44380672 | None:intergenic |
| TCTCCGACGACGGAAGCCGT+CGG | 0.605600 | 5.1:+44381378 | MS.gene053815:CDS |
| CGTCGGTCGTAGCCGAGTGG+GGG | 0.611250 | 5.1:+44381395 | MS.gene053815:CDS |
| TGACGCTGATAATACTTGGT+GGG | 0.618143 | 5.1:+44381552 | MS.gene053815:CDS |
| AGCCGTCGGTCGTAGCCGAG+TGG | 0.624990 | 5.1:+44381392 | MS.gene053815:CDS |
| GCAGAAGTTGAAGGCGCACG+TGG | 0.631821 | 5.1:-44381277 | None:intergenic |
| AAGTGGTTGTGATTTGTGAA+GGG | 0.636117 | 5.1:-44380507 | None:intergenic |
| TTTGTTTATCATGTCATACG+TGG | 0.648765 | 5.1:-44381254 | None:intergenic |
| ACGCTGCGCGTGGAATCTGG+CGG | 0.651618 | 5.1:+44381433 | MS.gene053815:CDS |
| GATTCCGTTACGTTACCTAA+CGG | 0.659410 | 5.1:-44381529 | None:intergenic |
| TCTGCAGGAGAAGGCGCACG+TGG | 0.664320 | 5.1:+44381325 | MS.gene053815:CDS |
| TTTAGATTTCGATGATTACG+AGG | 0.676604 | 5.1:+44381219 | MS.gene053815:CDS |
| GTGTTCCAAACTCAAAACGG+TGG | 0.704795 | 5.1:+44380862 | MS.gene053815:CDS |
| TGTTCCGTTAGGTAACGTAA+CGG | 0.710318 | 5.1:+44381525 | MS.gene053815:CDS |
| ACGTGCGCCTTCAACTTCTG+CGG | 0.730793 | 5.1:+44381279 | MS.gene053815:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5.1:44381043-44381062 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5.1:44381044-44381063 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5.1:44381108-44381127 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5.1:44381109-44381128 | None:intergenic | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5.1:44381084-44381103 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5.1:44381107-44381126 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | chr5.1:44380974-44380993 | None:intergenic | 20.0% |
| ! | ATCATAATCAAAACTGTTTC+CGG | - | chr5.1:44380833-44380852 | None:intergenic | 25.0% |
| ! | ATTGTTACAGATGAATCTTA+CGG | + | chr5.1:44381589-44381608 | MS.gene053815:CDS | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5.1:44381085-44381104 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5.1:44380997-44381016 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5.1:44380996-44381015 | None:intergenic | 25.0% |
| AAAGTTTATGTCAGAGATGA+CGG | + | chr5.1:44381463-44381482 | MS.gene053815:CDS | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | - | chr5.1:44380961-44380980 | None:intergenic | 30.0% | |
| ATCTGTAACAATAACAGCAT+CGG | - | chr5.1:44381581-44381600 | None:intergenic | 30.0% | |
| GAAATTGAAAGCAATGGAAA+CGG | - | chr5.1:44380551-44380570 | None:intergenic | 30.0% | |
| TGCTTTCAATTTCTGCAAAT+GGG | + | chr5.1:44380558-44380577 | MS.gene053815:CDS | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5.1:44381100-44381119 | None:intergenic | 30.0% | |
| TTGCTTTCAATTTCTGCAAA+TGG | + | chr5.1:44380557-44380576 | MS.gene053815:CDS | 30.0% | |
| TTGTTACAGATGAATCTTAC+GGG | + | chr5.1:44381590-44381609 | MS.gene053815:CDS | 30.0% | |
| TTTAGATTTCGATGATTACG+AGG | + | chr5.1:44381219-44381238 | MS.gene053815:CDS | 30.0% | |
| TTTGCAGAAATTGAAAGCAA+TGG | - | chr5.1:44380557-44380576 | None:intergenic | 30.0% | |
| TTTGTTTATCATGTCATACG+TGG | - | chr5.1:44381257-44381276 | None:intergenic | 30.0% | |
| AACGTGTTCCAAACTCAAAA+CGG | + | chr5.1:44380859-44380878 | MS.gene053815:CDS | 35.0% | |
| AATCTGACGCTGATAATACT+TGG | + | chr5.1:44381548-44381567 | MS.gene053815:CDS | 35.0% | |
| ATCACAACCACTTCTTTCAA+TGG | + | chr5.1:44380517-44380536 | MS.gene053815:CDS | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | + | chr5.1:44381144-44381163 | MS.gene053815:intron | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | chr5.1:44381143-44381162 | MS.gene053815:intron | 35.0% | |
| CTTGATGAAGATGACATAGA+AGG | - | chr5.1:44380787-44380806 | None:intergenic | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | - | chr5.1:44380960-44380979 | None:intergenic | 35.0% | |
| GAGTAACGTTGTTAAGCTTT+GGG | + | chr5.1:44381174-44381193 | MS.gene053815:intron | 35.0% | |
| GCAATGAATTAAAACCTGCT+TGG | - | chr5.1:44380471-44380490 | None:intergenic | 35.0% | |
| GCTTTCAATTTCTGCAAATG+GGG | + | chr5.1:44380559-44380578 | MS.gene053815:CDS | 35.0% | |
| TAATCTTGCAGTCGAGATAT+GGG | + | chr5.1:44381348-44381367 | MS.gene053815:CDS | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr5.1:44381130-44381149 | MS.gene053815:intron | 35.0% | |
| TTGGATTCCATTGAAAGAAG+TGG | - | chr5.1:44380527-44380546 | None:intergenic | 35.0% | |
| ! | AAGTGGTTGTGATTTGTGAA+GGG | - | chr5.1:44380510-44380529 | None:intergenic | 35.0% |
| ! | GACAGTATAGGATTTGGTTT+AGG | + | chr5.1:44381196-44381215 | MS.gene053815:intron | 35.0% |
| ! | GTTTTCGTTATCTTCGTCAT+CGG | - | chr5.1:44380716-44380735 | None:intergenic | 35.0% |
| ! | TCGTTGAGTCTATCGATTAA+TGG | - | chr5.1:44380445-44380464 | None:intergenic | 35.0% |
| ! | TGATTTGTGAAGGGAAAGAT+GGG | - | chr5.1:44380501-44380520 | None:intergenic | 35.0% |
| ! | TGTTAGTTTATCTTCGTCGT+CGG | + | chr5.1:44380744-44380763 | MS.gene053815:CDS | 35.0% |
| !!! | AAAGATTTTTTTCGCGTTGC+CGG | + | chr5.1:44380811-44380830 | MS.gene053815:CDS | 35.0% |
| !!! | AAGAAGCTTTTTTACGAAGG+TGG | - | chr5.1:44380651-44380670 | None:intergenic | 35.0% |
| AGAAAAGTCAGTGTTCCGTT+AGG | + | chr5.1:44381514-44381533 | MS.gene053815:CDS | 40.0% | |
| CATAGACGACAACGTAGTAT+TGG | + | chr5.1:44380886-44380905 | MS.gene053815:CDS | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | - | chr5.1:44381146-44381165 | None:intergenic | 40.0% | |
| GATTCCGTTACGTTACCTAA+CGG | - | chr5.1:44381532-44381551 | None:intergenic | 40.0% | |
| GATTTCGATGATTACGAGGA+TGG | + | chr5.1:44381223-44381242 | MS.gene053815:CDS | 40.0% | |
| GGAGTAACGTTGTTAAGCTT+TGG | + | chr5.1:44381173-44381192 | MS.gene053815:intron | 40.0% | |
| GTAATCTTGCAGTCGAGATA+TGG | + | chr5.1:44381347-44381366 | MS.gene053815:CDS | 40.0% | |
| TGAAAGCAATGGAAACGGAT+TGG | - | chr5.1:44380546-44380565 | None:intergenic | 40.0% | |
| TGACGCTGATAATACTTGGT+GGG | + | chr5.1:44381552-44381571 | MS.gene053815:CDS | 40.0% | |
| TGTTCCGTTAGGTAACGTAA+CGG | + | chr5.1:44381525-44381544 | MS.gene053815:CDS | 40.0% | |
| ! | GAAGTGGTTGTGATTTGTGA+AGG | - | chr5.1:44380511-44380530 | None:intergenic | 40.0% |
| ! | GTGATTTGTGAAGGGAAAGA+TGG | - | chr5.1:44380502-44380521 | None:intergenic | 40.0% |
| !! | CTTTGGGACAGTATAGGATT+TGG | + | chr5.1:44381190-44381209 | MS.gene053815:intron | 40.0% |
| !! | GTTAAGCTTTGGGACAGTAT+AGG | + | chr5.1:44381184-44381203 | MS.gene053815:intron | 40.0% |
| !!! | GGGAAGAAGCTTTTTTACGA+AGG | - | chr5.1:44380654-44380673 | None:intergenic | 40.0% |
| !!! | TATGTCCACCGTTTTGAGTT+TGG | - | chr5.1:44380870-44380889 | None:intergenic | 40.0% |
| ACGAAGGTGGACGATGAAAA+TGG | - | chr5.1:44380638-44380657 | None:intergenic | 45.0% | |
| AGACTCAACGATTTCCAAGC+AGG | + | chr5.1:44380454-44380473 | MS.gene053815:CDS | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | chr5.1:44380956-44380975 | None:intergenic | 45.0% | |
| CTGACGCTGATAATACTTGG+TGG | + | chr5.1:44381551-44381570 | MS.gene053815:CDS | 45.0% | |
| GAAATCATCGTCGTTGTCGA+AGG | - | chr5.1:44380689-44380708 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | chr5.1:44381148-44381167 | MS.gene053815:intron | 45.0% | |
| GTCGAAGGTGATTGATGGAA+GGG | - | chr5.1:44380674-44380693 | None:intergenic | 45.0% | |
| GTGTTCCAAACTCAAAACGG+TGG | + | chr5.1:44380862-44380881 | MS.gene053815:CDS | 45.0% | |
| TCGTTGTCGAAGGTGATTGA+TGG | - | chr5.1:44380679-44380698 | None:intergenic | 45.0% | |
| TGTCGAAGGTGATTGATGGA+AGG | - | chr5.1:44380675-44380694 | None:intergenic | 45.0% | |
| TTCGTTATCTTCGTCATCGG+AGG | - | chr5.1:44380713-44380732 | None:intergenic | 45.0% | |
| ! | GACTATCACATCTGGTGATG+CGG | - | chr5.1:44381305-44381324 | None:intergenic | 45.0% |
| !! | GGTGACTTTGTTGATGATGC+TGG | - | chr5.1:44380617-44380636 | None:intergenic | 45.0% |
| CCAGATGTGATAGTCTCTGC+AGG | + | chr5.1:44381310-44381329 | MS.gene053815:CDS | 50.0% | |
| CCTGCAGAGACTATCACATC+TGG | - | chr5.1:44381313-44381332 | None:intergenic | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | + | chr5.1:44381152-44381171 | MS.gene053815:intron | 50.0% | |
| GTGATAGTCTCTGCAGGAGA+AGG | + | chr5.1:44381316-44381335 | MS.gene053815:CDS | 50.0% | |
| ! | TGACGGACGTCAACGTTTGA+CGG | + | chr5.1:44381480-44381499 | MS.gene053815:CDS | 50.0% |
| !! | GACGGAGGGAGTATCACTAT+TGG | - | chr5.1:44380938-44380957 | None:intergenic | 50.0% |
| ACGTGCGCCTTCAACTTCTG+CGG | + | chr5.1:44381279-44381298 | MS.gene053815:CDS | 55.0% | |
| GGACGTCAACGTTTGACGGT+TGG | + | chr5.1:44381484-44381503 | MS.gene053815:CDS | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | chr5.1:44381151-44381170 | MS.gene053815:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5.1:44380952-44380971 | None:intergenic | 55.0% | |
| TAGTGATACTCCCTCCGTCC+CGG | + | chr5.1:44380939-44380958 | MS.gene053815:intron | 55.0% | |
| AACACGCTGCGCGTGGAATC+TGG | + | chr5.1:44381430-44381449 | MS.gene053815:CDS | 60.0% | |
| CAACGTTACTCCCTCCGTCC+CGG | - | chr5.1:44381165-44381184 | None:intergenic | 60.0% | |
| GATGCGGCCGCAGAAGTTGA+AGG | - | chr5.1:44381289-44381308 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5.1:44380953-44380972 | None:intergenic | 60.0% | |
| ! | GCAGAAGTTGAAGGCGCACG+TGG | - | chr5.1:44381280-44381299 | None:intergenic | 60.0% |
| ACGCTGCGCGTGGAATCTGG+CGG | + | chr5.1:44381433-44381452 | MS.gene053815:CDS | 65.0% | |
| CGCAGCGTGTTCCCCACCTT+GGG | - | chr5.1:44381421-44381440 | None:intergenic | 65.0% | |
| GGGACACTCGTCTCCGACGA+CGG | + | chr5.1:44381368-44381387 | MS.gene053815:CDS | 65.0% | |
| TCTCCGACGACGGAAGCCGT+CGG | + | chr5.1:44381378-44381397 | MS.gene053815:CDS | 65.0% | |
| ! | TCTGCAGGAGAAGGCGCACG+TGG | + | chr5.1:44381325-44381344 | MS.gene053815:CDS | 65.0% |
| AGCCGTCGGTCGTAGCCGAG+TGG | + | chr5.1:44381392-44381411 | MS.gene053815:CDS | 70.0% | |
| CCCCACTCGGCTACGACCGA+CGG | - | chr5.1:44381397-44381416 | None:intergenic | 70.0% | |
| CCGTCGGTCGTAGCCGAGTG+GGG | + | chr5.1:44381394-44381413 | MS.gene053815:CDS | 70.0% | |
| CGACCGACGGCTTCCGTCGT+CGG | - | chr5.1:44381384-44381403 | None:intergenic | 70.0% | |
| CGTCGGTCGTAGCCGAGTGG+GGG | + | chr5.1:44381395-44381414 | MS.gene053815:CDS | 70.0% | |
| GCCGTCGGTCGTAGCCGAGT+GGG | + | chr5.1:44381393-44381412 | MS.gene053815:CDS | 70.0% | |
| GCGCAGCGTGTTCCCCACCT+TGG | - | chr5.1:44381422-44381441 | None:intergenic | 70.0% | |
| AGCCGAGTGGGGGCCCAAGG+TGG | + | chr5.1:44381405-44381424 | MS.gene053815:CDS | 75.0% | |
| CCCCACCTTGGGCCCCCACT+CGG | - | chr5.1:44381410-44381429 | None:intergenic | 75.0% | |
| CCGAGTGGGGGCCCAAGGTG+GGG | + | chr5.1:44381407-44381426 | MS.gene053815:CDS | 75.0% | |
| CGTAGCCGAGTGGGGGCCCA+AGG | + | chr5.1:44381402-44381421 | MS.gene053815:CDS | 75.0% | |
| GCCGAGTGGGGGCCCAAGGT+GGG | + | chr5.1:44381406-44381425 | MS.gene053815:CDS | 75.0% | |
| GGTGGGGAACACGCTGCGCG+TGG | + | chr5.1:44381423-44381442 | MS.gene053815:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 44380433 | 44381621 | 44380433 | ID=MS.gene053815 |
| chr5.1 | mRNA | 44380433 | 44381621 | 44380433 | ID=MS.gene053815.t1;Parent=MS.gene053815 |
| chr5.1 | exon | 44380433 | 44380907 | 44380433 | ID=MS.gene053815.t1.exon1;Parent=MS.gene053815.t1 |
| chr5.1 | CDS | 44380433 | 44380907 | 44380433 | ID=cds.MS.gene053815.t1;Parent=MS.gene053815.t1 |
| chr5.1 | exon | 44381206 | 44381621 | 44381206 | ID=MS.gene053815.t1.exon2;Parent=MS.gene053815.t1 |
| chr5.1 | CDS | 44381206 | 44381621 | 44381206 | ID=cds.MS.gene053815.t1;Parent=MS.gene053815.t1 |
| Gene Sequence |
| Protein sequence |
