Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65682.t1 | XP_003614631.1 | 92.8 | 318 | 19 | 1 | 1 | 318 | 1 | 314 | 3.10E-137 | 498 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65682.t1 | G7K1J5 | 92.8 | 318 | 19 | 1 | 1 | 318 | 1 | 314 | 2.3e-137 | 498.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051226 | MS.gene65682 | 0.812539 | 4.03E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene65682 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene053815 | MS.gene65682 | 0.887949 | 9.10E-73 | -1.69E-46 |
| MS.gene054892 | MS.gene65682 | 0.803845 | 2.87E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene65682 | 0.805924 | 1.06E-49 | -1.69E-46 |
| MS.gene057422 | MS.gene65682 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene058404 | MS.gene65682 | 0.82721 | 1.77E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65682.t1 | MTR_5g056480 | 92.453 | 318 | 20 | 1 | 1 | 318 | 1 | 314 | 0.0 | 541 |
| MS.gene65682.t1 | MTR_1g110550 | 40.484 | 289 | 112 | 9 | 1 | 280 | 4 | 241 | 6.55e-52 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65682.t1 | AT1G68440 | 33.129 | 326 | 179 | 9 | 1 | 309 | 1 | 304 | 1.62e-36 | 133 |
| MS.gene65682.t1 | AT1G25400 | 36.486 | 148 | 78 | 5 | 155 | 299 | 144 | 278 | 2.56e-14 | 72.4 |
| MS.gene65682.t1 | AT1G25400 | 36.486 | 148 | 78 | 5 | 155 | 299 | 144 | 278 | 2.56e-14 | 72.4 |
Find 75 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTACGGGAAACATTAA+TGG | 0.287710 | 5.2:+48464797 | MS.gene65682:CDS |
| TCGTTGAGTCTATCGATTAA+TGG | 0.309567 | 5.2:-48463869 | None:intergenic |
| GTAATCTCGCAGTCGAGATA+TGG | 0.314723 | 5.2:+48464542 | MS.gene65682:CDS |
| ACGAAGGTGGACGATGAAAA+TGG | 0.314900 | 5.2:-48464062 | None:intergenic |
| CTTAACAACGTTATCACTAT+TGG | 0.316917 | 5.2:-48464362 | None:intergenic |
| GTGATAACGTTGTTAAGCTT+TGG | 0.325270 | 5.2:+48464368 | MS.gene65682:CDS |
| CTTTGGGACAGTATAGGATT+TGG | 0.332824 | 5.2:+48464385 | MS.gene65682:CDS |
| TTGCTTTCAATTTCTGCAAA+TGG | 0.333771 | 5.2:+48463984 | MS.gene65682:CDS |
| AACACGCTGCGCGTGGAATC+TGG | 0.336904 | 5.2:+48464625 | MS.gene65682:CDS |
| TGCTTTCAATTTCTGCAAAT+GGG | 0.348348 | 5.2:+48463985 | MS.gene65682:CDS |
| TGATAACGTTGTTAAGCTTT+GGG | 0.361870 | 5.2:+48464369 | MS.gene65682:CDS |
| GACAGTATAGGATTTGGTTT+AGG | 0.399313 | 5.2:+48464391 | MS.gene65682:CDS |
| TTGTTACGGATGAATCTTAC+GGG | 0.415731 | 5.2:+48464785 | MS.gene65682:CDS |
| CCTGCGGAGACGATCACATC+TGG | 0.432622 | 5.2:-48464505 | None:intergenic |
| CGAGTTACAGGAAACAGTTA+TGG | 0.432779 | 5.2:+48464250 | MS.gene65682:CDS |
| ATCACAACCACTTCCTTCAA+TGG | 0.443517 | 5.2:+48463944 | MS.gene65682:CDS |
| TGCTGATGCTGTTATTGTTA+CGG | 0.444662 | 5.2:+48464771 | MS.gene65682:CDS |
| GTTAAGCTTTGGGACAGTAT+AGG | 0.445462 | 5.2:+48464379 | MS.gene65682:CDS |
| AACGGATTGGATTCCATTGA+AGG | 0.457478 | 5.2:-48463957 | None:intergenic |
| CTTGATGAAGATGACATAGA+TGG | 0.461410 | 5.2:-48464211 | None:intergenic |
| TGAAAGCAATGGAAACGGAT+TGG | 0.472954 | 5.2:-48463970 | None:intergenic |
| TCGTTGTCGAAGGTGATTGA+TGG | 0.476471 | 5.2:-48464103 | None:intergenic |
| GTGATTTGTGAAGGGAAAGA+TGG | 0.477961 | 5.2:-48463926 | None:intergenic |
| TGATTTGTGAAGGGAAAGAT+GGG | 0.488143 | 5.2:-48463925 | None:intergenic |
| AATCTGACGCGGATAATACT+TGG | 0.488206 | 5.2:+48464743 | MS.gene65682:CDS |
| AGACTCAACGATTTCCAAGC+AGG | 0.489396 | 5.2:+48463881 | MS.gene65682:CDS |
| GATTTCGATGATTACGAGGA+TGG | 0.489828 | 5.2:+48464418 | MS.gene65682:CDS |
| TTGGATTCCATTGAAGGAAG+TGG | 0.497956 | 5.2:-48463951 | None:intergenic |
| TTTGCAGAAATTGAAAGCAA+TGG | 0.502375 | 5.2:-48463981 | None:intergenic |
| ATTGTTACGGATGAATCTTA+CGG | 0.506144 | 5.2:+48464784 | MS.gene65682:CDS |
| AAAGTTTATGTTAGAGATGA+CGG | 0.508455 | 5.2:+48464658 | MS.gene65682:CDS |
| GCCGTCGGTCGTAGCCGAGT+GGG | 0.511064 | 5.2:+48464588 | MS.gene65682:CDS |
| TAATCTCGCAGTCGAGATAT+GGG | 0.515982 | 5.2:+48464543 | MS.gene65682:CDS |
| CGTTAGTTTATCTTCGTCAT+CGG | 0.519809 | 5.2:+48464171 | MS.gene65682:CDS |
| TTCGTTATCTTCGTCATCGG+AGG | 0.521784 | 5.2:-48464137 | None:intergenic |
| CATAGACGACAACGTAGTAT+TGG | 0.523774 | 5.2:+48464313 | MS.gene65682:CDS |
| GGACGTCAACGTTTGACAGT+TGG | 0.524989 | 5.2:+48464679 | MS.gene65682:CDS |
| GATGCGGCCGCAGAAGTTGA+AGG | 0.525538 | 5.2:-48464481 | None:intergenic |
| GAAATCATCGTCGTTGTCGA+AGG | 0.525729 | 5.2:-48464113 | None:intergenic |
| GAAATTGAAAGCAATGGAAA+CGG | 0.527809 | 5.2:-48463975 | None:intergenic |
| AGAAAAGTCAGTGTTCCGTT+AGG | 0.537364 | 5.2:+48464709 | MS.gene65682:CDS |
| CGACCGACGGCTTCCGTCGT+CGG | 0.539535 | 5.2:-48464576 | None:intergenic |
| CCGTCGGTCGTAGCCGAGTG+GGG | 0.540475 | 5.2:+48464589 | MS.gene65682:CDS |
| GGTGACTTTGTTGATGATGC+TGG | 0.548195 | 5.2:-48464041 | None:intergenic |
| CCAGATGTGATCGTCTCCGC+AGG | 0.548921 | 5.2:+48464505 | MS.gene65682:CDS |
| GTGATCGTCTCCGCAGGAGA+AGG | 0.560004 | 5.2:+48464511 | MS.gene65682:CDS |
| GCTTTCAATTTCTGCAAATG+GGG | 0.560368 | 5.2:+48463986 | MS.gene65682:CDS |
| GGTGGGGAACACGCTGCGCG+TGG | 0.563432 | 5.2:+48464618 | MS.gene65682:CDS |
| GTCGAAGGTGATTGATGGAA+GGG | 0.564506 | 5.2:-48464098 | None:intergenic |
| GGGACACTCGTCTCCGACGA+CGG | 0.568741 | 5.2:+48464563 | MS.gene65682:CDS |
| GCAATGAATTGAAACCTGCT+TGG | 0.577118 | 5.2:-48463895 | None:intergenic |
| CCCCACTCGGCTACGACCGA+CGG | 0.583274 | 5.2:-48464589 | None:intergenic |
| CGCAGCGTGTTCCCCACCGT+GGG | 0.586011 | 5.2:-48464613 | None:intergenic |
| GAAGTGGTTGTGATTTGTGA+AGG | 0.591968 | 5.2:-48463935 | None:intergenic |
| TGTCGAAGGTGATTGATGGA+AGG | 0.594870 | 5.2:-48464099 | None:intergenic |
| GCAGAAGTTGAAGGCGCATG+TGG | 0.595970 | 5.2:-48464472 | None:intergenic |
| CTGACGCGGATAATACTTGG+TGG | 0.603373 | 5.2:+48464746 | MS.gene65682:CDS |
| AACGTGTTCGAAACTCAAAA+CGG | 0.603538 | 5.2:+48464286 | MS.gene65682:CDS |
| ACCACGTGCGCCTTCTCCTG+CGG | 0.604226 | 5.2:-48464521 | None:intergenic |
| TCTCCGACGACGGAAGCCGT+CGG | 0.605600 | 5.2:+48464573 | MS.gene65682:CDS |
| CGTCGGTCGTAGCCGAGTGG+GGG | 0.611250 | 5.2:+48464590 | MS.gene65682:CDS |
| GACGATCACATCTGGTGATG+CGG | 0.617092 | 5.2:-48464497 | None:intergenic |
| AGCCGTCGGTCGTAGCCGAG+TGG | 0.624990 | 5.2:+48464587 | MS.gene65682:CDS |
| TCCGCAGGAGAAGGCGCACG+TGG | 0.637444 | 5.2:+48464520 | MS.gene65682:CDS |
| TGACGCGGATAATACTTGGT+GGG | 0.643095 | 5.2:+48464747 | MS.gene65682:CDS |
| TTTGTTTATCATGTCATACG+TGG | 0.648765 | 5.2:-48464449 | None:intergenic |
| ACGCTGCGCGTGGAATCTGG+CGG | 0.651618 | 5.2:+48464628 | MS.gene65682:CDS |
| AAGTGGTTGTGATTTGTGAA+GGG | 0.653510 | 5.2:-48463934 | None:intergenic |
| GCGCAGCGTGTTCCCCACCG+TGG | 0.659108 | 5.2:-48464614 | None:intergenic |
| GATTCCGTTACGTTACCTAA+CGG | 0.659410 | 5.2:-48464724 | None:intergenic |
| TTTAGATTTCGATGATTACG+AGG | 0.676604 | 5.2:+48464414 | MS.gene65682:CDS |
| GTGTTCGAAACTCAAAACGG+TGG | 0.697096 | 5.2:+48464289 | MS.gene65682:CDS |
| TAACGTAACGGAATCTGACG+CGG | 0.701362 | 5.2:+48464732 | MS.gene65682:CDS |
| TGTTCCGTTAGGTAACGTAA+CGG | 0.710318 | 5.2:+48464720 | MS.gene65682:CDS |
| ACATGCGCCTTCAACTTCTG+CGG | 0.735945 | 5.2:+48464474 | MS.gene65682:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAGTTTATGTTAGAGATGA+CGG | + | chr5.2:48464658-48464677 | MS.gene65682:CDS | 25.0% |
| !!! | AAAGATTTTTTTCGAGTTAC+AGG | + | chr5.2:48464238-48464257 | MS.gene65682:CDS | 25.0% |
| ATTGTTACGGATGAATCTTA+CGG | + | chr5.2:48464784-48464803 | MS.gene65682:CDS | 30.0% | |
| CTTAACAACGTTATCACTAT+TGG | - | chr5.2:48464365-48464384 | None:intergenic | 30.0% | |
| GAAATTGAAAGCAATGGAAA+CGG | - | chr5.2:48463978-48463997 | None:intergenic | 30.0% | |
| TGCTTTCAATTTCTGCAAAT+GGG | + | chr5.2:48463985-48464004 | MS.gene65682:CDS | 30.0% | |
| TTGCTTTCAATTTCTGCAAA+TGG | + | chr5.2:48463984-48464003 | MS.gene65682:CDS | 30.0% | |
| TTTAGATTTCGATGATTACG+AGG | + | chr5.2:48464414-48464433 | MS.gene65682:CDS | 30.0% | |
| TTTGCAGAAATTGAAAGCAA+TGG | - | chr5.2:48463984-48464003 | None:intergenic | 30.0% | |
| TTTGTTTATCATGTCATACG+TGG | - | chr5.2:48464452-48464471 | None:intergenic | 30.0% | |
| ! | TGATAACGTTGTTAAGCTTT+GGG | + | chr5.2:48464369-48464388 | MS.gene65682:CDS | 30.0% |
| AACGTGTTCGAAACTCAAAA+CGG | + | chr5.2:48464286-48464305 | MS.gene65682:CDS | 35.0% | |
| CTTGATGAAGATGACATAGA+TGG | - | chr5.2:48464214-48464233 | None:intergenic | 35.0% | |
| GCTTTCAATTTCTGCAAATG+GGG | + | chr5.2:48463986-48464005 | MS.gene65682:CDS | 35.0% | |
| TGCTGATGCTGTTATTGTTA+CGG | + | chr5.2:48464771-48464790 | MS.gene65682:CDS | 35.0% | |
| TTGTTACGGATGAATCTTAC+GGG | + | chr5.2:48464785-48464804 | MS.gene65682:CDS | 35.0% | |
| ! | AAGTGGTTGTGATTTGTGAA+GGG | - | chr5.2:48463937-48463956 | None:intergenic | 35.0% |
| ! | CGTTAGTTTATCTTCGTCAT+CGG | + | chr5.2:48464171-48464190 | MS.gene65682:CDS | 35.0% |
| ! | GACAGTATAGGATTTGGTTT+AGG | + | chr5.2:48464391-48464410 | MS.gene65682:CDS | 35.0% |
| ! | GTGATAACGTTGTTAAGCTT+TGG | + | chr5.2:48464368-48464387 | MS.gene65682:CDS | 35.0% |
| ! | GTTTTCGTTATCTTCGTCAT+CGG | - | chr5.2:48464143-48464162 | None:intergenic | 35.0% |
| ! | TCGTTGAGTCTATCGATTAA+TGG | - | chr5.2:48463872-48463891 | None:intergenic | 35.0% |
| ! | TGATTTGTGAAGGGAAAGAT+GGG | - | chr5.2:48463928-48463947 | None:intergenic | 35.0% |
| !!! | AAGAAGCTTTTTTACGAAGG+TGG | - | chr5.2:48464078-48464097 | None:intergenic | 35.0% |
| AATCTGACGCGGATAATACT+TGG | + | chr5.2:48464743-48464762 | MS.gene65682:CDS | 40.0% | |
| AGAAAAGTCAGTGTTCCGTT+AGG | + | chr5.2:48464709-48464728 | MS.gene65682:CDS | 40.0% | |
| ATCACAACCACTTCCTTCAA+TGG | + | chr5.2:48463944-48463963 | MS.gene65682:CDS | 40.0% | |
| CATAGACGACAACGTAGTAT+TGG | + | chr5.2:48464313-48464332 | MS.gene65682:CDS | 40.0% | |
| CGAGTTACAGGAAACAGTTA+TGG | + | chr5.2:48464250-48464269 | MS.gene65682:CDS | 40.0% | |
| GATTCCGTTACGTTACCTAA+CGG | - | chr5.2:48464727-48464746 | None:intergenic | 40.0% | |
| GATTTCGATGATTACGAGGA+TGG | + | chr5.2:48464418-48464437 | MS.gene65682:CDS | 40.0% | |
| GCAATGAATTGAAACCTGCT+TGG | - | chr5.2:48463898-48463917 | None:intergenic | 40.0% | |
| TAATCTCGCAGTCGAGATAT+GGG | + | chr5.2:48464543-48464562 | MS.gene65682:CDS | 40.0% | |
| TGAAAGCAATGGAAACGGAT+TGG | - | chr5.2:48463973-48463992 | None:intergenic | 40.0% | |
| TGTTCCGTTAGGTAACGTAA+CGG | + | chr5.2:48464720-48464739 | MS.gene65682:CDS | 40.0% | |
| TTGGATTCCATTGAAGGAAG+TGG | - | chr5.2:48463954-48463973 | None:intergenic | 40.0% | |
| ! | GAAGTGGTTGTGATTTGTGA+AGG | - | chr5.2:48463938-48463957 | None:intergenic | 40.0% |
| ! | GTGATTTGTGAAGGGAAAGA+TGG | - | chr5.2:48463929-48463948 | None:intergenic | 40.0% |
| !! | AACGGATTGGATTCCATTGA+AGG | - | chr5.2:48463960-48463979 | None:intergenic | 40.0% |
| !! | CTTTGGGACAGTATAGGATT+TGG | + | chr5.2:48464385-48464404 | MS.gene65682:CDS | 40.0% |
| !! | GTTAAGCTTTGGGACAGTAT+AGG | + | chr5.2:48464379-48464398 | MS.gene65682:CDS | 40.0% |
| !!! | GGGAAGAAGCTTTTTTACGA+AGG | - | chr5.2:48464081-48464100 | None:intergenic | 40.0% |
| ACGAAGGTGGACGATGAAAA+TGG | - | chr5.2:48464065-48464084 | None:intergenic | 45.0% | |
| AGACTCAACGATTTCCAAGC+AGG | + | chr5.2:48463881-48463900 | MS.gene65682:CDS | 45.0% | |
| GAAATCATCGTCGTTGTCGA+AGG | - | chr5.2:48464116-48464135 | None:intergenic | 45.0% | |
| GTAATCTCGCAGTCGAGATA+TGG | + | chr5.2:48464542-48464561 | MS.gene65682:CDS | 45.0% | |
| GTCGAAGGTGATTGATGGAA+GGG | - | chr5.2:48464101-48464120 | None:intergenic | 45.0% | |
| GTGTTCGAAACTCAAAACGG+TGG | + | chr5.2:48464289-48464308 | MS.gene65682:CDS | 45.0% | |
| TCGTTGTCGAAGGTGATTGA+TGG | - | chr5.2:48464106-48464125 | None:intergenic | 45.0% | |
| TGACGCGGATAATACTTGGT+GGG | + | chr5.2:48464747-48464766 | MS.gene65682:CDS | 45.0% | |
| TGTCGAAGGTGATTGATGGA+AGG | - | chr5.2:48464102-48464121 | None:intergenic | 45.0% | |
| TTCGTTATCTTCGTCATCGG+AGG | - | chr5.2:48464140-48464159 | None:intergenic | 45.0% | |
| ! | TAACGTAACGGAATCTGACG+CGG | + | chr5.2:48464732-48464751 | MS.gene65682:CDS | 45.0% |
| !! | GGTGACTTTGTTGATGATGC+TGG | - | chr5.2:48464044-48464063 | None:intergenic | 45.0% |
| ACATGCGCCTTCAACTTCTG+CGG | + | chr5.2:48464474-48464493 | MS.gene65682:CDS | 50.0% | |
| CTGACGCGGATAATACTTGG+TGG | + | chr5.2:48464746-48464765 | MS.gene65682:CDS | 50.0% | |
| GGACGTCAACGTTTGACAGT+TGG | + | chr5.2:48464679-48464698 | MS.gene65682:CDS | 50.0% | |
| ! | GACGATCACATCTGGTGATG+CGG | - | chr5.2:48464500-48464519 | None:intergenic | 50.0% |
| ! | GCAGAAGTTGAAGGCGCATG+TGG | - | chr5.2:48464475-48464494 | None:intergenic | 55.0% |
| AACACGCTGCGCGTGGAATC+TGG | + | chr5.2:48464625-48464644 | MS.gene65682:CDS | 60.0% | |
| CCAGATGTGATCGTCTCCGC+AGG | + | chr5.2:48464505-48464524 | MS.gene65682:CDS | 60.0% | |
| CCTGCGGAGACGATCACATC+TGG | - | chr5.2:48464508-48464527 | None:intergenic | 60.0% | |
| GATGCGGCCGCAGAAGTTGA+AGG | - | chr5.2:48464484-48464503 | None:intergenic | 60.0% | |
| GTGATCGTCTCCGCAGGAGA+AGG | + | chr5.2:48464511-48464530 | MS.gene65682:CDS | 60.0% | |
| ACCACGTGCGCCTTCTCCTG+CGG | - | chr5.2:48464524-48464543 | None:intergenic | 65.0% | |
| ACGCTGCGCGTGGAATCTGG+CGG | + | chr5.2:48464628-48464647 | MS.gene65682:CDS | 65.0% | |
| GGGACACTCGTCTCCGACGA+CGG | + | chr5.2:48464563-48464582 | MS.gene65682:CDS | 65.0% | |
| TCTCCGACGACGGAAGCCGT+CGG | + | chr5.2:48464573-48464592 | MS.gene65682:CDS | 65.0% | |
| AGCCGTCGGTCGTAGCCGAG+TGG | + | chr5.2:48464587-48464606 | MS.gene65682:CDS | 70.0% | |
| CCCCACTCGGCTACGACCGA+CGG | - | chr5.2:48464592-48464611 | None:intergenic | 70.0% | |
| CCGTCGGTCGTAGCCGAGTG+GGG | + | chr5.2:48464589-48464608 | MS.gene65682:CDS | 70.0% | |
| CGACCGACGGCTTCCGTCGT+CGG | - | chr5.2:48464579-48464598 | None:intergenic | 70.0% | |
| CGCAGCGTGTTCCCCACCGT+GGG | - | chr5.2:48464616-48464635 | None:intergenic | 70.0% | |
| CGTCGGTCGTAGCCGAGTGG+GGG | + | chr5.2:48464590-48464609 | MS.gene65682:CDS | 70.0% | |
| GCCGTCGGTCGTAGCCGAGT+GGG | + | chr5.2:48464588-48464607 | MS.gene65682:CDS | 70.0% | |
| ! | TCCGCAGGAGAAGGCGCACG+TGG | + | chr5.2:48464520-48464539 | MS.gene65682:CDS | 70.0% |
| CGTAGCCGAGTGGGGGCCCA+CGG | + | chr5.2:48464597-48464616 | MS.gene65682:CDS | 75.0% | |
| GCGCAGCGTGTTCCCCACCG+TGG | - | chr5.2:48464617-48464636 | None:intergenic | 75.0% | |
| GGTGGGGAACACGCTGCGCG+TGG | + | chr5.2:48464618-48464637 | MS.gene65682:CDS | 75.0% | |
| ! | AGCCGAGTGGGGGCCCACGG+TGG | + | chr5.2:48464600-48464619 | MS.gene65682:CDS | 80.0% |
| ! | CCCCACCGTGGGCCCCCACT+CGG | - | chr5.2:48464605-48464624 | None:intergenic | 80.0% |
| ! | CCGAGTGGGGGCCCACGGTG+GGG | + | chr5.2:48464602-48464621 | MS.gene65682:CDS | 80.0% |
| ! | GCCGAGTGGGGGCCCACGGT+GGG | + | chr5.2:48464601-48464620 | MS.gene65682:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 48463860 | 48464816 | 48463860 | ID=MS.gene65682 |
| chr5.2 | mRNA | 48463860 | 48464816 | 48463860 | ID=MS.gene65682.t1;Parent=MS.gene65682 |
| chr5.2 | exon | 48463860 | 48464816 | 48463860 | ID=MS.gene65682.t1.exon1;Parent=MS.gene65682.t1 |
| chr5.2 | CDS | 48463860 | 48464816 | 48463860 | ID=cds.MS.gene65682.t1;Parent=MS.gene65682.t1 |
| Gene Sequence |
| Protein sequence |
