AlfalfaGEDB | MS.gene053885

M. sativa cultivar XinJiangDaYe / MS.gene053885

KEGG: -
GO: GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043565 GO:0044212 GO:0045893 GO:0045935 GO:0045944 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053885.t1	XP_003614528.1	86.9	237	31	0	1	237	1	237	2.60E-112	414.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053885.t1	Q9FKK2	45.3	225	108	5	5	223	3	218	2.7e-41	170.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053885.t1	G7JZE1	86.9	237	31	0	1	237	1	237	1.9e-112	414.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene053885.t1	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene053885	MS.gene22094	PPI
MS.gene053885	MS.gene068836	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053885.t1	MTR_5g055100	86.920	237	31	0	1	237	1	237	4.63e-157	435
MS.gene053885.t1	MTR_2g085280	80.085	236	47	0	1	236	1	236	6.81e-141	394
MS.gene053885.t1	MTR_2g085250	80.085	236	47	0	1	236	1	236	2.32e-140	393
MS.gene053885.t1	MTR_5g045560	75.949	237	57	0	1	237	1	237	1.03e-124	353
MS.gene053885.t1	MTR_5g053390	73.778	225	59	0	1	225	1	225	3.39e-121	344
MS.gene053885.t1	MTR_8g043650	63.713	237	86	0	1	237	1	237	4.44e-112	321
MS.gene053885.t1	MTR_1g075600	69.333	225	69	0	1	225	1	225	6.65e-112	321
MS.gene053885.t1	MTR_1g077360	69.333	225	69	0	1	225	1	225	1.58e-111	320
MS.gene053885.t1	MTR_1g105920	66.210	219	74	0	1	219	1	219	5.93e-108	311
MS.gene053885.t1	MTR_1g012570	64.979	237	83	0	1	237	1	237	2.95e-104	301
MS.gene053885.t1	MTR_1g105910	61.778	225	86	0	1	225	1	225	3.04e-103	299
MS.gene053885.t1	MTR_2g030740	63.291	237	87	0	1	237	1	237	7.05e-103	298
MS.gene053885.t1	MTR_3g052920	62.557	219	82	0	1	219	1	219	5.80e-100	290
MS.gene053885.t1	MTR_1g105905	60.909	220	86	0	18	237	1	220	2.05e-97	283
MS.gene053885.t1	MTR_0121s0080	57.384	237	100	1	1	237	1	236	1.16e-96	282
MS.gene053885.t1	MTR_3g030770	60.851	235	74	3	1	225	1	227	4.05e-96	280
MS.gene053885.t1	MTR_1g108510	60.426	235	75	3	1	225	1	227	6.20e-94	275
MS.gene053885.t1	MTR_2g093190	59.149	235	78	3	1	225	1	227	1.03e-90	267
MS.gene053885.t1	MTR_1g108580	56.118	237	91	2	1	237	1	224	3.83e-88	260
MS.gene053885.t1	MTR_3g052870	58.447	219	72	2	1	219	1	200	8.05e-86	254
MS.gene053885.t1	MTR_1g106070	61.538	182	70	0	1	182	1	182	6.87e-81	240
MS.gene053885.t1	MTR_7g062350	51.271	236	113	2	3	237	14	248	3.70e-80	241
MS.gene053885.t1	MTR_1g075570	60.674	178	56	1	18	195	1	164	3.26e-63	194
MS.gene053885.t1	MTR_3g080940	44.670	197	105	1	1	193	1	197	1.27e-51	167
MS.gene053885.t1	MTR_0121s0100	61.719	128	49	0	1	128	1	128	3.94e-49	157
MS.gene053885.t1	MTR_3g067910	73.529	102	27	0	21	122	2	103	1.49e-48	155
MS.gene053885.t1	MTR_3g030780	60.163	123	49	0	1	123	1	123	2.01e-48	156
MS.gene053885.t1	MTR_3g067875	87.500	56	7	0	18	73	1	56	1.87e-29	105
MS.gene053885.t1	MTR_8g086290	35.542	166	97	2	5	167	8	166	5.86e-28	105
MS.gene053885.t1	MTR_2g105290	32.184	174	106	2	5	174	8	173	1.38e-27	103
MS.gene053885.t1	MTR_7g028448	38.312	154	83	2	5	158	8	149	3.14e-27	103
MS.gene053885.t1	MTR_4g036915	38.312	154	83	2	5	158	8	149	3.14e-27	103
MS.gene053885.t1	MTR_3g067915	53.846	91	42	0	33	123	3	93	2.06e-25	95.9
MS.gene053885.t1	MTR_3g067870	73.016	63	17	0	16	78	83	145	3.34e-25	97.4
MS.gene053885.t1	MTR_1g047550	50.649	77	38	0	9	85	2	78	2.88e-23	92.8
MS.gene053885.t1	MTR_8g079502	53.521	71	33	0	9	79	2	72	4.41e-23	92.4
MS.gene053885.t1	MTR_8g051580	54.930	71	32	0	9	79	2	72	1.32e-22	91.3
MS.gene053885.t1	MTR_4g131030	49.367	79	40	0	9	87	2	80	1.83e-22	91.7
MS.gene053885.t1	MTR_8g046350	34.568	162	94	4	9	165	2	156	2.21e-22	90.1
MS.gene053885.t1	MTR_1g108500	57.317	82	14	1	22	103	110	170	6.48e-22	92.8
MS.gene053885.t1	MTR_1g054265	46.835	79	42	0	9	87	2	80	3.76e-21	87.0
MS.gene053885.t1	MTR_1g063160	39.048	105	62	1	9	111	2	106	1.43e-20	85.9
MS.gene053885.t1	MTR_4g127140	34.831	178	108	3	5	175	8	184	1.12e-19	83.6
MS.gene053885.t1	MTR_4g093970	45.000	100	46	2	10	101	29	127	2.10e-18	81.6
MS.gene053885.t1	MTR_4g094632	52.174	69	33	0	9	77	2	70	3.40e-18	79.0
MS.gene053885.t1	MTR_3g005530	50.000	68	34	0	9	76	2	69	9.88e-18	79.3
MS.gene053885.t1	MTR_4g094638	50.725	69	34	0	9	77	2	70	3.18e-17	77.0
MS.gene053885.t1	MTR_3g452380	43.750	80	45	0	3	82	11	90	4.44e-17	77.8
MS.gene053885.t1	MTR_8g033270	49.367	79	38	1	9	85	2	80	1.51e-16	76.6
MS.gene053885.t1	MTR_4g102530	47.222	72	38	0	10	81	3	74	1.79e-16	75.5
MS.gene053885.t1	MTR_4g109830	50.725	69	33	1	9	76	2	70	2.25e-16	75.9
MS.gene053885.t1	MTR_1g053070	52.941	68	32	0	9	76	2	69	4.78e-16	75.1
MS.gene053885.t1	MTR_8g087860	48.529	68	35	0	9	76	18	85	6.74e-16	74.7
MS.gene053885.t1	MTR_5g066180	48.529	68	35	0	9	76	2	69	7.71e-16	74.3
MS.gene053885.t1	MTR_7g075870	46.914	81	39	1	10	86	3	83	8.43e-16	73.9
MS.gene053885.t1	MTR_6g464720	50.725	69	33	1	9	76	2	70	1.18e-15	74.3
MS.gene053885.t1	MTR_2g017865	48.529	68	35	0	9	76	17	84	1.43e-15	73.9
MS.gene053885.t1	MTR_1g101970	51.471	68	33	0	9	76	2	69	1.86e-15	72.4
MS.gene053885.t1	MTR_0003s0590	51.471	68	33	0	9	76	2	69	2.50e-15	73.6
MS.gene053885.t1	MTR_5g032150	50.746	67	33	0	9	75	2	68	3.35e-15	72.4
MS.gene053885.t1	MTR_4g084740	48.101	79	39	2	9	86	2	79	3.46e-15	73.9
MS.gene053885.t1	MTR_8g033220	45.333	75	41	0	10	84	3	77	3.48e-15	72.4
MS.gene053885.t1	MTR_5g032520	50.746	67	33	0	9	75	2	68	3.76e-15	72.4
MS.gene053885.t1	MTR_8g033220	45.333	75	41	0	10	84	3	77	3.78e-15	72.4
MS.gene053885.t1	MTR_2g009890	42.105	76	44	0	9	84	2	77	7.15e-15	72.4
MS.gene053885.t1	MTR_6g015975	49.275	69	34	1	9	76	2	70	9.43e-15	71.6
MS.gene053885.t1	MTR_5g046790	48.529	68	34	1	9	75	2	69	1.17e-14	70.9
MS.gene053885.t1	MTR_5g031000	44.118	68	38	0	9	76	2	69	1.18e-14	70.9
MS.gene053885.t1	MTR_5g031000	44.118	68	38	0	9	76	2	69	1.18e-14	71.2
MS.gene053885.t1	MTR_7g016600	49.275	69	34	1	9	76	2	70	1.23e-14	71.2
MS.gene053885.t1	MTR_8g066260	46.377	69	36	1	9	76	2	70	1.36e-14	71.2
MS.gene053885.t1	MTR_2g461710	53.571	56	26	0	9	64	2	57	1.44e-14	66.6
MS.gene053885.t1	MTR_7g016630	44.444	72	39	1	9	79	2	73	1.78e-14	70.9
MS.gene053885.t1	MTR_5g021270	50.000	70	33	1	9	76	2	71	1.81e-14	70.5
MS.gene053885.t1	MTR_7g075870	50.000	68	33	1	10	76	3	70	1.95e-14	70.1
MS.gene053885.t1	MTR_5g021270	50.000	70	33	1	9	76	2	71	1.96e-14	70.5
MS.gene053885.t1	MTR_3g102570	47.887	71	36	1	9	78	2	72	3.31e-14	70.9
MS.gene053885.t1	MTR_7g075850	45.122	82	42	2	9	87	2	83	3.60e-14	70.1
MS.gene053885.t1	MTR_1g029670	48.485	66	33	1	9	74	2	66	4.02e-14	68.6
MS.gene053885.t1	MTR_1g038300	46.429	84	39	2	9	86	2	85	4.78e-14	69.3
MS.gene053885.t1	MTR_3g437790	31.469	143	79	5	26	158	30	163	6.76e-14	68.2
MS.gene053885.t1	MTR_3g088615	44.286	70	37	1	9	76	2	71	7.56e-14	67.8
MS.gene053885.t1	MTR_5g066960	49.123	57	29	0	9	65	2	58	9.46e-14	64.3
MS.gene053885.t1	MTR_4g109810	26.423	246	136	5	9	230	2	226	9.97e-14	68.6
MS.gene053885.t1	MTR_5g046870	47.826	69	35	1	9	76	2	70	1.03e-13	65.9
MS.gene053885.t1	MTR_8g022970	31.579	171	90	6	2	158	9	166	1.51e-13	67.0
MS.gene053885.t1	MTR_3g113030	47.619	63	33	0	9	71	2	64	2.09e-13	67.8
MS.gene053885.t1	MTR_8g097090	55.357	56	25	0	9	64	2	57	3.50e-13	67.4
MS.gene053885.t1	MTR_3g084980	53.571	56	26	0	9	64	2	57	3.96e-13	67.0
MS.gene053885.t1	MTR_4g093030	35.537	121	60	3	9	114	2	119	1.19e-12	64.3
MS.gene053885.t1	MTR_4g051538	38.202	89	55	0	1	89	1	89	7.36e-12	63.5
MS.gene053885.t1	MTR_3g109930	31.447	159	95	5	27	178	20	171	2.06e-11	61.2
MS.gene053885.t1	MTR_4g108720	42.857	77	42	1	9	83	2	78	7.15e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053885.t1	AT5G60440	45.333	225	108	5	5	223	3	218	1.94e-54	177
MS.gene053885.t1	AT1G65360	40.517	232	123	6	5	230	3	225	9.68e-43	144
MS.gene053885.t1	AT1G01530	40.000	190	106	3	4	192	2	184	5.56e-38	133
MS.gene053885.t1	AT2G24840	46.835	158	79	2	9	163	63	218	9.79e-38	133
MS.gene053885.t1	AT4G36590	44.118	170	81	4	5	164	3	168	1.71e-36	129
MS.gene053885.t1	AT3G04100	27.551	196	138	2	2	193	7	202	1.55e-25	99.8
MS.gene053885.t1	AT2G34440	40.541	111	65	1	9	119	2	111	1.61e-22	90.9
MS.gene053885.t1	AT3G66656	58.824	68	28	0	9	76	2	69	5.34e-22	89.7
MS.gene053885.t1	AT1G72350	34.637	179	73	6	9	182	43	182	3.14e-21	89.0
MS.gene053885.t1	AT1G28460	31.429	175	106	5	5	170	4	173	1.23e-18	80.9
MS.gene053885.t1	AT4G37940	32.000	175	84	5	9	154	2	170	1.49e-18	81.3
MS.gene053885.t1	AT2G22630	32.787	183	86	7	9	154	2	184	3.55e-18	80.5
MS.gene053885.t1	AT2G22630	32.787	183	86	7	9	154	2	184	3.55e-18	80.5
MS.gene053885.t1	AT2G45660	52.941	68	32	0	10	77	3	70	4.30e-18	79.0
MS.gene053885.t1	AT2G45650	54.412	68	31	0	9	76	2	69	5.16e-18	80.9
MS.gene053885.t1	AT5G51870	52.778	72	34	0	5	76	21	92	8.05e-18	79.0
MS.gene053885.t1	AT2G45660	52.941	68	32	0	10	77	3	70	1.23e-17	79.0
MS.gene053885.t1	AT4G22950	48.611	72	37	0	10	81	3	74	1.65e-17	77.8
MS.gene053885.t1	AT4G37940	31.694	183	88	6	9	154	2	184	1.75e-17	79.0
MS.gene053885.t1	AT4G09960	48.529	68	35	0	9	76	2	69	2.42e-17	78.2
MS.gene053885.t1	AT4G09960	48.529	68	35	0	9	76	3	70	2.78e-17	78.2
MS.gene053885.t1	AT4G09960	48.529	68	35	0	9	76	2	69	2.79e-17	78.2
MS.gene053885.t1	AT1G29962	28.249	177	113	4	5	167	4	180	3.01e-17	77.4
MS.gene053885.t1	AT4G09960	48.529	68	35	0	9	76	12	79	3.64e-17	78.2
MS.gene053885.t1	AT5G51870	53.731	67	31	0	10	76	3	69	4.97e-17	76.3
MS.gene053885.t1	AT4G22950	49.296	71	36	0	10	80	3	73	4.98e-17	77.4
MS.gene053885.t1	AT4G22950	49.296	71	36	0	10	80	3	73	4.98e-17	77.4
MS.gene053885.t1	AT4G09960	48.529	68	35	0	9	76	28	95	5.40e-17	78.2
MS.gene053885.t1	AT5G51870	53.731	67	31	0	10	76	3	69	7.13e-17	76.6
MS.gene053885.t1	AT5G51870	52.857	70	33	0	7	76	10	79	8.98e-17	77.0
MS.gene053885.t1	AT5G23260	35.570	149	68	4	5	125	14	162	9.74e-17	77.4
MS.gene053885.t1	AT4G09960	48.529	68	35	0	9	76	97	164	1.28e-16	77.8
MS.gene053885.t1	AT5G51870	53.731	67	31	0	10	76	3	69	1.29e-16	76.3
MS.gene053885.t1	AT5G10140	49.275	69	34	1	9	76	2	70	1.49e-16	75.1
MS.gene053885.t1	AT5G10140	29.688	192	121	3	9	199	2	180	1.95e-16	75.5
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	2.18e-16	72.8
MS.gene053885.t1	AT3G30260	30.822	146	71	4	9	124	2	147	2.28e-16	76.3
MS.gene053885.t1	AT5G10140	45.783	83	41	2	9	90	2	81	2.40e-16	74.7
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	2.57e-16	73.9
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	2.57e-16	73.9
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	2.57e-16	73.9
MS.gene053885.t1	AT3G57390	52.941	68	32	0	9	76	2	69	2.70e-16	75.5
MS.gene053885.t1	AT5G23260	45.652	92	44	2	5	90	14	105	2.79e-16	76.3
MS.gene053885.t1	AT5G10140	49.275	69	34	1	9	76	2	70	2.92e-16	74.7
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	3.08e-16	73.6
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	3.08e-16	73.6
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	3.08e-16	73.6
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	3.08e-16	73.6
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	3.08e-16	73.6
MS.gene053885.t1	AT5G23260	35.333	150	69	4	9	130	2	151	3.22e-16	75.9
MS.gene053885.t1	AT3G57230	45.588	68	37	0	9	76	2	69	3.25e-16	73.6
MS.gene053885.t1	AT4G18960	45.570	79	43	0	2	80	11	89	3.67e-16	75.5
MS.gene053885.t1	AT2G42830	44.737	76	42	0	1	76	9	84	5.20e-16	75.1
MS.gene053885.t1	AT3G57390	52.941	68	32	0	9	76	2	69	5.63e-16	75.1
MS.gene053885.t1	AT2G42830	44.737	76	42	0	1	76	9	84	5.69e-16	75.1
MS.gene053885.t1	AT3G61120	51.471	68	33	0	9	76	2	69	5.76e-16	75.1
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	7.04e-16	73.9
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	7.04e-16	73.9
MS.gene053885.t1	AT2G22540	50.746	67	33	0	9	75	2	68	7.21e-16	74.7
MS.gene053885.t1	AT2G22540	50.746	67	33	0	9	75	2	68	7.21e-16	74.7
MS.gene053885.t1	AT3G58780	47.887	71	37	0	6	76	14	84	7.86e-16	74.7
MS.gene053885.t1	AT1G22130	39.394	99	59	1	9	106	2	100	8.02e-16	75.9
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	8.19e-16	73.9
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	8.19e-16	73.9
MS.gene053885.t1	AT5G62165	50.746	67	33	0	10	76	3	69	8.19e-16	73.9
MS.gene053885.t1	AT3G58780	47.887	71	37	0	6	76	20	90	8.54e-16	74.7
MS.gene053885.t1	AT3G57230	45.588	68	37	0	9	76	2	69	9.58e-16	74.3
MS.gene053885.t1	AT3G57230	45.588	68	37	0	9	76	2	69	9.58e-16	74.3
MS.gene053885.t1	AT5G23260	46.591	88	41	2	9	90	2	89	9.98e-16	74.3
MS.gene053885.t1	AT4G37940	47.059	68	36	0	9	76	2	69	1.54e-15	72.4
MS.gene053885.t1	AT3G58780	45.333	75	41	0	2	76	10	84	1.67e-15	74.3
MS.gene053885.t1	AT4G24540	51.471	68	33	0	9	76	2	69	1.68e-15	73.2
MS.gene053885.t1	AT5G51860	50.746	67	33	0	10	76	3	69	1.94e-15	72.8
MS.gene053885.t1	AT3G54340	47.143	70	35	1	9	76	2	71	2.34e-15	73.2
MS.gene053885.t1	AT5G51860	50.746	67	33	0	10	76	3	69	2.72e-15	72.4
MS.gene053885.t1	AT5G13790	48.529	68	35	0	9	76	2	69	2.88e-15	73.6
MS.gene053885.t1	AT5G13790	48.529	68	35	0	9	76	2	69	3.01e-15	73.6
MS.gene053885.t1	AT1G77980	40.449	89	52	1	9	96	2	90	4.65e-15	73.6
MS.gene053885.t1	AT4G11880	48.611	72	36	1	10	80	3	74	8.82e-15	70.5
MS.gene053885.t1	AT4G11880	48.611	72	36	1	10	80	3	74	8.82e-15	70.5
MS.gene053885.t1	AT5G65050	47.826	69	35	1	9	76	2	70	8.83e-15	70.5
MS.gene053885.t1	AT5G60910	47.826	69	35	1	9	76	2	70	8.97e-15	71.6
MS.gene053885.t1	AT1G77950	43.421	76	41	2	9	83	2	76	1.28e-14	71.2
MS.gene053885.t1	AT1G77950	43.421	76	41	2	9	83	2	76	1.28e-14	71.2
MS.gene053885.t1	AT1G77950	43.421	76	41	2	9	83	2	76	1.28e-14	71.2
MS.gene053885.t1	AT1G77950	43.421	76	41	2	9	83	2	76	1.28e-14	71.2
MS.gene053885.t1	AT4G11880	48.611	72	36	1	10	80	3	74	1.32e-14	70.9
MS.gene053885.t1	AT4G11880	48.611	72	36	1	10	80	3	74	1.32e-14	70.9
MS.gene053885.t1	AT2G14210	47.826	69	35	1	9	76	2	70	1.64e-14	70.9
MS.gene053885.t1	AT1G26310	44.928	69	37	1	9	76	2	70	1.74e-14	71.2
MS.gene053885.t1	AT2G14210	47.826	69	35	1	9	76	2	70	1.99e-14	70.5
MS.gene053885.t1	AT1G69120	44.928	69	37	1	9	76	2	70	2.24e-14	70.5
MS.gene053885.t1	AT5G15800	49.275	69	34	1	9	76	2	70	2.25e-14	70.9
MS.gene053885.t1	AT5G65050	47.826	69	35	1	9	76	2	70	2.48e-14	69.3
MS.gene053885.t1	AT5G65050	47.826	69	35	1	9	76	2	70	2.55e-14	69.7
MS.gene053885.t1	AT5G65050	47.826	69	35	1	9	76	2	70	2.60e-14	69.3
MS.gene053885.t1	AT1G17310	51.316	76	35	1	8	83	47	120	3.09e-14	69.7
MS.gene053885.t1	AT2G03710	41.000	100	51	3	9	100	2	101	3.40e-14	70.5
MS.gene053885.t1	AT1G28450	28.977	176	111	6	5	168	4	177	3.51e-14	68.9
MS.gene053885.t1	AT2G03710	41.000	100	51	3	9	100	2	101	3.62e-14	70.1
MS.gene053885.t1	AT5G15800	49.275	69	34	1	9	76	2	70	3.79e-14	70.1
MS.gene053885.t1	AT2G03710	41.000	100	51	3	9	100	2	101	3.87e-14	68.9
MS.gene053885.t1	AT5G20240	45.714	70	36	1	9	76	2	71	4.04e-14	68.2
MS.gene053885.t1	AT1G17310	51.316	76	35	1	8	83	58	131	4.69e-14	69.3
MS.gene053885.t1	AT1G69120	44.928	69	37	1	9	76	2	70	4.86e-14	69.7
MS.gene053885.t1	AT5G20240	45.714	70	36	1	9	76	2	71	5.50e-14	68.9
MS.gene053885.t1	AT2G22540	57.143	56	24	0	9	64	2	57	7.72e-14	68.9
MS.gene053885.t1	AT1G47760	31.304	115	69	2	9	115	2	114	1.08e-13	67.8
MS.gene053885.t1	AT3G58780	50.820	61	30	0	6	66	14	74	1.31e-13	68.6
MS.gene053885.t1	AT5G65060	46.377	69	36	1	9	76	2	70	1.67e-13	67.4
MS.gene053885.t1	AT3G58780	47.692	65	34	0	2	66	10	74	1.79e-13	68.6
MS.gene053885.t1	AT5G65060	46.377	69	36	1	9	76	2	70	1.86e-13	67.0
MS.gene053885.t1	AT5G65060	46.377	69	36	1	9	76	2	70	2.04e-13	67.0
MS.gene053885.t1	AT5G65070	40.964	83	45	2	9	90	2	81	2.21e-13	65.9
MS.gene053885.t1	AT5G65070	31.210	157	77	6	9	138	2	154	2.31e-13	67.0
MS.gene053885.t1	AT1G24260	55.357	56	25	0	9	64	2	57	2.53e-13	67.4
MS.gene053885.t1	AT1G24260	55.357	56	25	0	9	64	2	57	2.76e-13	67.8
MS.gene053885.t1	AT1G24260	55.357	56	25	0	9	64	2	57	2.82e-13	67.8
MS.gene053885.t1	AT1G71692	45.714	70	37	1	9	77	2	71	4.29e-13	66.6
MS.gene053885.t1	AT3G02310	44.928	69	37	1	9	76	2	70	5.30e-13	66.2
MS.gene053885.t1	AT5G65080	41.379	87	47	2	1	86	1	84	7.12e-13	65.5
MS.gene053885.t1	AT5G65070	40.964	83	45	2	9	90	2	81	8.46e-13	65.9
MS.gene053885.t1	AT3G02310	39.130	92	51	2	9	95	2	93	9.82e-13	66.2
MS.gene053885.t1	AT5G65070	40.964	83	45	2	9	90	2	81	1.02e-12	65.5
MS.gene053885.t1	AT5G65070	49.123	57	29	0	9	65	2	58	2.61e-12	64.7
MS.gene053885.t1	AT4G37435	43.056	72	40	1	9	79	2	73	6.46e-12	62.8
MS.gene053885.t1	AT1G18750	38.961	77	45	1	9	83	2	78	9.03e-12	64.3
MS.gene053885.t1	AT1G18750	38.961	77	45	1	9	83	2	78	1.12e-11	63.9
MS.gene053885.t1	AT1G18750	38.961	77	45	1	9	83	2	78	1.14e-11	63.9
MS.gene053885.t1	AT2G26320	43.243	74	40	1	5	76	14	87	2.88e-11	59.3
MS.gene053885.t1	AT5G49490	38.636	88	47	2	5	85	41	128	2.96e-11	62.4
MS.gene053885.t1	AT5G65080	43.548	62	35	0	1	62	1	62	2.97e-11	61.2
MS.gene053885.t1	AT1G46408	43.836	73	37	2	10	78	5	77	6.08e-11	61.2
MS.gene053885.t1	AT5G49420	37.931	87	49	2	5	86	3	89	6.97e-11	61.6

Find 57 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTGCATGATGTCATCATTT+TGG	0.109779	5.3:+43744347	None:intergenic
GACCTTATTCATCTCATAAA+TGG	0.175011	5.3:+43744177	None:intergenic
GAACCATTTCCAACATAAAA+TGG	0.249437	5.3:+43744055	None:intergenic
TTTGTTTGGTTTCAACAATA+TGG	0.259787	5.3:-43743939	MS.gene053885:CDS
TCTATGATCGTTTCAACATT+TGG	0.289536	5.3:+43744394	None:intergenic
CAACATAAAATGGAAGGGTT+TGG	0.295108	5.3:+43744065	None:intergenic
GTTGAATCTTGTTGAGGATT+TGG	0.322565	5.3:+43744004	None:intergenic
TTATTGCTCAACATGCTGAT+AGG	0.334492	5.3:-43744111	MS.gene053885:CDS
CCTGATTTGTCTTTCGCACC+TGG	0.338707	5.3:+43744221	None:intergenic
ATTATACAAGAAGGCTTTAG+AGG	0.340263	5.3:-43744146	MS.gene053885:CDS
AACATAAAATGGAAGGGTTT+GGG	0.353082	5.3:+43744066	None:intergenic
TTGTTTGGTTTCAACAATAT+GGG	0.380840	5.3:-43743938	MS.gene053885:CDS
AGCGAGCTTTGCACCCTTTG+TGG	0.386397	5.3:-43744475	MS.gene053885:CDS
ATGTTGCAACTACATTTGTT+TGG	0.392068	5.3:-43743953	MS.gene053885:CDS
GTTGGAAATGGTTCATCCTC+TGG	0.402464	5.3:-43744046	MS.gene053885:CDS
TGCTGATAGGGTTGAAATGC+AGG	0.408645	5.3:-43744098	MS.gene053885:CDS
ACCTTATTCATCTCATAAAT+GGG	0.419947	5.3:+43744178	None:intergenic
TCCCATTTATGAGATGAATA+AGG	0.420859	5.3:-43744179	MS.gene053885:CDS
CGCAATATATGCACCACAAA+GGG	0.463056	5.3:+43744462	None:intergenic
CCTTCTTGTATAATTCAAGT+TGG	0.484620	5.3:+43744155	None:intergenic
AACAAATGTAGTTGCAACAT+AGG	0.491539	5.3:+43743956	None:intergenic
TATTGCTCAACATGCTGATA+GGG	0.491945	5.3:-43744110	MS.gene053885:CDS
TGACATCATGCAATTAATTG+AGG	0.500210	5.3:-43744338	MS.gene053885:CDS
CCAGGTGCGAAAGACAAATC+AGG	0.504787	5.3:-43744221	MS.gene053885:CDS
GCTCGCGCACCTTGGCTCTA+CGG	0.510044	5.3:+43744311	None:intergenic
GTAGTTGCAACATAGGGTTA+TGG	0.511593	5.3:+43743963	None:intergenic
TTCAACAATATGGGAGAAGA+AGG	0.528297	5.3:-43743929	MS.gene053885:CDS
GAAGGTGGACATGGTCCCCA+TGG	0.528388	5.3:-43743911	MS.gene053885:CDS
GCCAAGGTGCGCGAGCTCAA+TGG	0.535008	5.3:-43744304	MS.gene053885:CDS
ACCATTGAGCTCGCGCACCT+TGG	0.535093	5.3:+43744303	None:intergenic
CCAACTTGAATTATACAAGA+AGG	0.537115	5.3:-43744155	MS.gene053885:CDS
CATTTCCAACATAAAATGGA+AGG	0.542188	5.3:+43744059	None:intergenic
GAGCTCAATGGTATATTGAC+TGG	0.544330	5.3:-43744292	MS.gene053885:CDS
ACAAATGTAGTTGCAACATA+GGG	0.553298	5.3:+43743957	None:intergenic
CTTTCTCGAAGCGCCGTAGT+GGG	0.553366	5.3:-43744513	MS.gene053885:CDS
CCGTGAGAATGAGCTAATCC+AGG	0.557926	5.3:-43744239	MS.gene053885:CDS
ATTTCCAACATAAAATGGAA+GGG	0.561384	5.3:+43744060	None:intergenic
GCTCATATCAAAAGAACCCA+TGG	0.571548	5.3:+43743894	None:intergenic
GGATTTGGCTGATGCTCAAG+AGG	0.571835	5.3:+43744019	None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG	0.571963	5.3:-43744514	MS.gene053885:CDS
ACTGGTATGAAAGATGCAAT+CGG	0.573096	5.3:-43744274	MS.gene053885:CDS
AACAATATGGGAGAAGAAGG+TGG	0.594567	5.3:-43743926	MS.gene053885:CDS
GCGCTAATCATATTCTCACC+TGG	0.598540	5.3:-43744442	MS.gene053885:CDS
ATGGGAGAAGAAGGTGGACA+TGG	0.604335	5.3:-43743920	MS.gene053885:CDS
CTCATATCAAAAGAACCCAT+GGG	0.612341	5.3:+43743895	None:intergenic
TGTGCTTTAGCCATGTCAAG+CGG	0.619256	5.3:-43744604	None:intergenic
GGAAAGGTTGAATCTTGTTG+AGG	0.620573	5.3:+43743998	None:intergenic
TCAAGCGGAAAGAAAACTCA+AGG	0.621333	5.3:-43744589	MS.gene053885:CDS
AAGGTGGACATGGTCCCCAT+GGG	0.627258	5.3:-43743910	MS.gene053885:CDS
CCTGGATTAGCTCATTCTCA+CGG	0.627343	5.3:+43744239	None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG	0.627906	5.3:+43744500	None:intergenic
GCGCAATATATGCACCACAA+AGG	0.628392	5.3:+43744461	None:intergenic
AATGAAAATACTTTCTCACC+AGG	0.642771	5.3:+43744424	None:intergenic
TGAGGATTACCGTAGAGCCA+AGG	0.649629	5.3:-43744320	MS.gene053885:CDS
GCTGATAGGGTTGAAATGCA+GGG	0.657468	5.3:-43744097	MS.gene053885:CDS
ATGCTCAAGAGGCATTCCAG+AGG	0.678253	5.3:+43744030	None:intergenic
TCATATCAAAAGAACCCATG+GGG	0.745957	5.3:+43743896	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ACCTTATTCATCTCATAAAT+GGG	+	chr5.3:43744318-43744337	None:intergenic	25.0%
!	ATTTCCAACATAAAATGGAA+GGG	+	chr5.3:43744436-43744455	None:intergenic	25.0%
!!	TTGTTTGGTTTCAACAATAT+GGG	-	chr5.3:43744555-43744574	MS.gene053885:CDS	25.0%
!!	TTTGTTTGGTTTCAACAATA+TGG	-	chr5.3:43744554-43744573	MS.gene053885:CDS	25.0%
	AACAAATGTAGTTGCAACAT+AGG	+	chr5.3:43744540-43744559	None:intergenic	30.0%
	AACATAAAATGGAAGGGTTT+GGG	+	chr5.3:43744430-43744449	None:intergenic	30.0%
	AATGAAAATACTTTCTCACC+AGG	+	chr5.3:43744072-43744091	None:intergenic	30.0%
	ACAAATGTAGTTGCAACATA+GGG	+	chr5.3:43744539-43744558	None:intergenic	30.0%
	ATGTTGCAACTACATTTGTT+TGG	-	chr5.3:43744540-43744559	MS.gene053885:CDS	30.0%
	CATTTCCAACATAAAATGGA+AGG	+	chr5.3:43744437-43744456	None:intergenic	30.0%
	CCAACTTGAATTATACAAGA+AGG	-	chr5.3:43744338-43744357	MS.gene053885:CDS	30.0%
	CCTTCTTGTATAATTCAAGT+TGG	+	chr5.3:43744341-43744360	None:intergenic	30.0%
	GAACCATTTCCAACATAAAA+TGG	+	chr5.3:43744441-43744460	None:intergenic	30.0%
	GACCTTATTCATCTCATAAA+TGG	+	chr5.3:43744319-43744338	None:intergenic	30.0%
	TCCCATTTATGAGATGAATA+AGG	-	chr5.3:43744314-43744333	MS.gene053885:CDS	30.0%
	TCTATGATCGTTTCAACATT+TGG	+	chr5.3:43744102-43744121	None:intergenic	30.0%
	TGACATCATGCAATTAATTG+AGG	-	chr5.3:43744155-43744174	MS.gene053885:CDS	30.0%
!	AGACAAATCAGGAACATTTT+TGG	-	chr5.3:43744283-43744302	MS.gene053885:CDS	30.0%
!	ATTATACAAGAAGGCTTTAG+AGG	-	chr5.3:43744347-43744366	MS.gene053885:CDS	30.0%
!	ATTGCATGATGTCATCATTT+TGG	+	chr5.3:43744149-43744168	None:intergenic	30.0%
!	CTTCCATTTTATGTTGGAAA+TGG	-	chr5.3:43744435-43744454	MS.gene053885:CDS	30.0%
!	TTGCATGATGTCATCATTTT+GGG	+	chr5.3:43744148-43744167	None:intergenic	30.0%
!!!	GGTGAGAAAGTATTTTCATT+TGG	-	chr5.3:43744072-43744091	MS.gene053885:CDS	30.0%
	ACTGGTATGAAAGATGCAAT+CGG	-	chr5.3:43744219-43744238	MS.gene053885:CDS	35.0%
	CAACATAAAATGGAAGGGTT+TGG	+	chr5.3:43744431-43744450	None:intergenic	35.0%
	GTTGAATCTTGTTGAGGATT+TGG	+	chr5.3:43744492-43744511	None:intergenic	35.0%
	TATTGCTCAACATGCTGATA+GGG	-	chr5.3:43744383-43744402	MS.gene053885:CDS	35.0%
	TTATTGCTCAACATGCTGAT+AGG	-	chr5.3:43744382-43744401	MS.gene053885:CDS	35.0%
	TTCAACAATATGGGAGAAGA+AGG	-	chr5.3:43744564-43744583	MS.gene053885:CDS	35.0%
!	CAAACCCTTCCATTTTATGT+TGG	-	chr5.3:43744429-43744448	MS.gene053885:CDS	35.0%
!!	CAAATCAGGAACATTTTTGG+TGG	-	chr5.3:43744286-43744305	MS.gene053885:CDS	35.0%
	AACAATATGGGAGAAGAAGG+TGG	-	chr5.3:43744567-43744586	MS.gene053885:CDS	40.0%
	ATGGAAAAACTCTGCTGGAA+AGG	+	chr5.3:43744514-43744533	None:intergenic	40.0%
	CGCAATATATGCACCACAAA+GGG	+	chr5.3:43744034-43744053	None:intergenic	40.0%
	GAGCTCAATGGTATATTGAC+TGG	-	chr5.3:43744201-43744220	MS.gene053885:CDS	40.0%
	GGAAAGGTTGAATCTTGTTG+AGG	+	chr5.3:43744498-43744517	None:intergenic	40.0%
	GTAGTTGCAACATAGGGTTA+TGG	+	chr5.3:43744533-43744552	None:intergenic	40.0%
	TCAAGCGGAAAGAAAACTCA+AGG	-	chr5.3:43743904-43743923	MS.gene053885:CDS	40.0%
!	ATGATGTCATCATTTTGGGC+TGG	+	chr5.3:43744144-43744163	None:intergenic	40.0%
	CTTTCTTGAAGAGCCCACTA+CGG	+	chr5.3:43743996-43744015	None:intergenic	45.0%
	GCGCAATATATGCACCACAA+AGG	+	chr5.3:43744035-43744054	None:intergenic	45.0%
	GCGCTAATCATATTCTCACC+TGG	-	chr5.3:43744051-43744070	MS.gene053885:CDS	45.0%
	GCTGATAGGGTTGAAATGCA+GGG	-	chr5.3:43744396-43744415	MS.gene053885:CDS	45.0%
	GGGTTATGGAAAAACTCTGC+TGG	+	chr5.3:43744519-43744538	None:intergenic	45.0%
	GTTGGAAATGGTTCATCCTC+TGG	-	chr5.3:43744447-43744466	MS.gene053885:CDS	45.0%
	TGCTGATAGGGTTGAAATGC+AGG	-	chr5.3:43744395-43744414	MS.gene053885:CDS	45.0%
!!	CCTGGATTAGCTCATTCTCA+CGG	+	chr5.3:43744257-43744276	None:intergenic	45.0%
	ATGGGAGAAGAAGGTGGACA+TGG	-	chr5.3:43744573-43744592	MS.gene053885:CDS	50.0%
	CCAGGTGCGAAAGACAAATC+AGG	-	chr5.3:43744272-43744291	MS.gene053885:CDS	50.0%
	CCGTGAGAATGAGCTAATCC+AGG	-	chr5.3:43744254-43744273	MS.gene053885:CDS	50.0%
	GGATTTGGCTGATGCTCAAG+AGG	+	chr5.3:43744477-43744496	None:intergenic	50.0%
	TGAGGATTACCGTAGAGCCA+AGG	-	chr5.3:43744173-43744192	MS.gene053885:CDS	50.0%
!	CCTGATTTGTCTTTCGCACC+TGG	+	chr5.3:43744275-43744294	None:intergenic	50.0%
!!	ATGCTCAAGAGGCATTCCAG+AGG	+	chr5.3:43744466-43744485	None:intergenic	50.0%
	AAGGTGGACATGGTCCCCAT+GGG	-	chr5.3:43744583-43744602	MS.gene053885:CDS	55.0%
	AGCGAGCTTTGCACCCTTTG+TGG	-	chr5.3:43744018-43744037	MS.gene053885:CDS	55.0%
!!	ACTTTCTCGAAGCGCCGTAG+TGG	-	chr5.3:43743979-43743998	MS.gene053885:CDS	55.0%
!!	CTTTCTCGAAGCGCCGTAGT+GGG	-	chr5.3:43743980-43743999	MS.gene053885:CDS	55.0%
	ACCATTGAGCTCGCGCACCT+TGG	+	chr5.3:43744193-43744212	None:intergenic	60.0%
	GAAGGTGGACATGGTCCCCA+TGG	-	chr5.3:43744582-43744601	MS.gene053885:CDS	60.0%
	GCCAAGGTGCGCGAGCTCAA+TGG	-	chr5.3:43744189-43744208	MS.gene053885:CDS	65.0%
!!	GCTCGCGCACCTTGGCTCTA+CGG	+	chr5.3:43744185-43744204	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	43743901	43744614	43743901	ID=MS.gene053885
chr5.3	mRNA	43743901	43744614	43743901	ID=MS.gene053885.t1;Parent=MS.gene053885
chr5.3	exon	43743901	43744614	43743901	ID=MS.gene053885.t1.exon1;Parent=MS.gene053885.t1
chr5.3	CDS	43743901	43744614	43743901	ID=cds.MS.gene053885.t1;Parent=MS.gene053885.t1

Gene Sequence

>MS.gene053885

ATGTCAAGCGGAAAGAAAACTCAAGGTCGTAAAAAGATTGAGATGAAAAAGATGAGCAATGAAAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCTAGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCGCTAATCATATTCTCACCTGGTGAGAAAGTATTTTCATTTGGTCATCCAAATGTTGAAACGATCATAGATCGTTTTCTCTCTCAAATTCCAGCCCAAAATGATGACATCATGCAATTAATTGAGGATTACCGTAGAGCCAAGGTGCGCGAGCTCAATGGTATATTGACTGGTATGAAAGATGCAATCGGCGTCAATAAGAACCGTGAGAATGAGCTAATCCAGGTGCGAAAGACAAATCAGGAACATTTTTGGTGGACTCGTCCCATTTATGAGATGAATAAGGTCCAACTTGAATTATACAAGAAGGCTTTAGAGGATCTTCTTAAACTTATTGCTCAACATGCTGATAGGGTTGAAATGCAGGGTACTTCTACCCAAACCCTTCCATTTTATGTTGGAAATGGTTCATCCTCTGGAATGCCTCTTGAGCATCAGCCAAATCCTCAACAAGATTCAACCTTTCCAGCAGAGTTTTTCCATAACCCTATGTTGCAACTACATTTGTTTGGTTTCAACAATATGGGAGAAGAAGGTGGACATGGTCCCCATGGGTTCTTTTGA

Protein sequence

>MS.gene053885.t1

MSSGKKTQGRKKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPGEKVFSFGHPNVETIIDRFLSQIPAQNDDIMQLIEDYRRAKVRELNGILTGMKDAIGVNKNRENELIQVRKTNQEHFWWTRPIYEMNKVQLELYKKALEDLLKLIAQHADRVEMQGTSTQTLPFYVGNGSSSGMPLEHQPNPQQDSTFPAEFFHNPMLQLHLFGFNNMGEEGGHGPHGFF