Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053902.t1 | AES97117.1 | 86.1 | 223 | 30 | 1 | 1 | 222 | 15 | 237 | 2.10E-103 | 385.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053902.t1 | Q9FKK2 | 42.5 | 212 | 112 | 4 | 1 | 208 | 13 | 218 | 4.2e-36 | 152.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053902.t1 | G7JZ38 | 86.1 | 223 | 30 | 1 | 1 | 222 | 15 | 237 | 1.5e-103 | 385.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene053902.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene053902 | MS.gene068836 | PPI |
| MS.gene053902 | MS.gene22094 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053902.t1 | MTR_5g045560 | 86.099 | 223 | 30 | 1 | 1 | 222 | 15 | 237 | 8.37e-133 | 373 |
| MS.gene053902.t1 | MTR_2g085280 | 74.775 | 222 | 55 | 1 | 1 | 221 | 15 | 236 | 2.00e-120 | 342 |
| MS.gene053902.t1 | MTR_2g085250 | 74.775 | 222 | 55 | 1 | 1 | 221 | 15 | 236 | 6.98e-120 | 340 |
| MS.gene053902.t1 | MTR_5g055100 | 74.439 | 223 | 56 | 1 | 1 | 222 | 15 | 237 | 3.45e-118 | 336 |
| MS.gene053902.t1 | MTR_5g053390 | 75.829 | 211 | 50 | 1 | 1 | 210 | 15 | 225 | 2.96e-114 | 326 |
| MS.gene053902.t1 | MTR_8g043650 | 65.471 | 223 | 76 | 1 | 1 | 222 | 15 | 237 | 3.18e-103 | 298 |
| MS.gene053902.t1 | MTR_1g075600 | 69.194 | 211 | 64 | 1 | 1 | 210 | 15 | 225 | 1.37e-101 | 294 |
| MS.gene053902.t1 | MTR_1g077360 | 65.403 | 211 | 72 | 1 | 1 | 210 | 15 | 225 | 8.90e-95 | 277 |
| MS.gene053902.t1 | MTR_1g105920 | 65.854 | 205 | 69 | 1 | 1 | 204 | 15 | 219 | 1.92e-93 | 273 |
| MS.gene053902.t1 | MTR_2g030740 | 65.919 | 223 | 75 | 1 | 1 | 222 | 15 | 237 | 8.45e-92 | 269 |
| MS.gene053902.t1 | MTR_1g105910 | 62.559 | 211 | 78 | 1 | 1 | 210 | 15 | 225 | 1.74e-91 | 268 |
| MS.gene053902.t1 | MTR_1g105905 | 60.455 | 220 | 86 | 1 | 4 | 222 | 1 | 220 | 3.98e-91 | 267 |
| MS.gene053902.t1 | MTR_1g012570 | 65.919 | 223 | 75 | 1 | 1 | 222 | 15 | 237 | 3.05e-90 | 265 |
| MS.gene053902.t1 | MTR_3g052920 | 63.902 | 205 | 73 | 1 | 1 | 204 | 15 | 219 | 1.07e-87 | 259 |
| MS.gene053902.t1 | MTR_1g108510 | 60.181 | 221 | 69 | 4 | 1 | 210 | 15 | 227 | 5.40e-84 | 249 |
| MS.gene053902.t1 | MTR_3g030770 | 60.181 | 221 | 69 | 4 | 1 | 210 | 15 | 227 | 6.37e-84 | 249 |
| MS.gene053902.t1 | MTR_0121s0080 | 57.399 | 223 | 93 | 2 | 1 | 222 | 15 | 236 | 8.75e-84 | 249 |
| MS.gene053902.t1 | MTR_2g093190 | 58.824 | 221 | 72 | 4 | 1 | 210 | 15 | 227 | 5.95e-80 | 239 |
| MS.gene053902.t1 | MTR_3g052870 | 59.024 | 205 | 64 | 2 | 1 | 204 | 15 | 200 | 3.69e-77 | 231 |
| MS.gene053902.t1 | MTR_1g108580 | 55.856 | 222 | 86 | 2 | 1 | 222 | 15 | 224 | 5.47e-76 | 229 |
| MS.gene053902.t1 | MTR_1g106070 | 64.881 | 168 | 59 | 0 | 1 | 168 | 15 | 182 | 1.59e-73 | 221 |
| MS.gene053902.t1 | MTR_7g062350 | 51.869 | 214 | 101 | 2 | 10 | 222 | 36 | 248 | 2.95e-70 | 215 |
| MS.gene053902.t1 | MTR_1g075570 | 60.112 | 178 | 57 | 1 | 4 | 181 | 1 | 164 | 1.07e-60 | 187 |
| MS.gene053902.t1 | MTR_3g067910 | 75.490 | 102 | 25 | 0 | 7 | 108 | 2 | 103 | 6.17e-51 | 161 |
| MS.gene053902.t1 | MTR_3g080940 | 47.531 | 162 | 85 | 0 | 1 | 162 | 15 | 176 | 2.13e-50 | 163 |
| MS.gene053902.t1 | MTR_0121s0100 | 64.407 | 118 | 42 | 0 | 1 | 118 | 15 | 132 | 7.73e-48 | 154 |
| MS.gene053902.t1 | MTR_3g030780 | 58.772 | 114 | 47 | 0 | 1 | 114 | 15 | 128 | 8.89e-42 | 138 |
| MS.gene053902.t1 | MTR_3g067915 | 59.574 | 94 | 38 | 0 | 19 | 112 | 3 | 96 | 9.01e-31 | 109 |
| MS.gene053902.t1 | MTR_3g067875 | 89.286 | 56 | 6 | 0 | 4 | 59 | 1 | 56 | 1.53e-29 | 105 |
| MS.gene053902.t1 | MTR_7g028448 | 38.406 | 138 | 73 | 3 | 8 | 145 | 25 | 150 | 2.88e-28 | 105 |
| MS.gene053902.t1 | MTR_4g036915 | 38.406 | 138 | 73 | 3 | 8 | 145 | 25 | 150 | 2.88e-28 | 105 |
| MS.gene053902.t1 | MTR_8g086290 | 37.179 | 156 | 90 | 4 | 1 | 154 | 18 | 167 | 3.61e-26 | 100 |
| MS.gene053902.t1 | MTR_3g067870 | 74.603 | 63 | 16 | 0 | 2 | 64 | 83 | 145 | 7.20e-25 | 96.3 |
| MS.gene053902.t1 | MTR_1g108500 | 54.167 | 96 | 23 | 1 | 8 | 103 | 110 | 184 | 6.66e-24 | 97.4 |
| MS.gene053902.t1 | MTR_2g105290 | 32.903 | 155 | 100 | 1 | 1 | 155 | 18 | 168 | 9.36e-24 | 93.6 |
| MS.gene053902.t1 | MTR_4g127140 | 31.707 | 164 | 98 | 3 | 8 | 161 | 25 | 184 | 2.16e-22 | 90.5 |
| MS.gene053902.t1 | MTR_8g051580 | 46.000 | 100 | 50 | 2 | 11 | 108 | 18 | 115 | 5.35e-20 | 84.0 |
| MS.gene053902.t1 | MTR_1g047550 | 57.377 | 61 | 26 | 0 | 11 | 71 | 18 | 78 | 1.66e-19 | 82.8 |
| MS.gene053902.t1 | MTR_4g131030 | 37.500 | 120 | 56 | 2 | 11 | 111 | 18 | 137 | 4.69e-19 | 82.4 |
| MS.gene053902.t1 | MTR_8g079502 | 61.818 | 55 | 21 | 0 | 11 | 65 | 18 | 72 | 6.77e-19 | 81.3 |
| MS.gene053902.t1 | MTR_1g063160 | 42.000 | 100 | 56 | 2 | 1 | 98 | 8 | 107 | 1.42e-18 | 80.1 |
| MS.gene053902.t1 | MTR_8g046350 | 55.738 | 61 | 27 | 0 | 11 | 71 | 18 | 78 | 1.34e-17 | 77.0 |
| MS.gene053902.t1 | MTR_1g054265 | 46.575 | 73 | 39 | 0 | 1 | 73 | 8 | 80 | 1.43e-17 | 77.4 |
| MS.gene053902.t1 | MTR_4g102530 | 50.000 | 68 | 34 | 0 | 1 | 68 | 8 | 75 | 1.14e-16 | 75.9 |
| MS.gene053902.t1 | MTR_4g093970 | 41.837 | 98 | 49 | 1 | 1 | 90 | 34 | 131 | 1.76e-16 | 75.9 |
| MS.gene053902.t1 | MTR_4g094632 | 33.099 | 142 | 76 | 4 | 4 | 144 | 11 | 134 | 2.95e-16 | 73.6 |
| MS.gene053902.t1 | MTR_8g033270 | 50.685 | 73 | 35 | 1 | 1 | 72 | 8 | 80 | 3.57e-15 | 72.4 |
| MS.gene053902.t1 | MTR_7g075870 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 4.47e-15 | 71.6 |
| MS.gene053902.t1 | MTR_3g005530 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 9.14e-15 | 70.9 |
| MS.gene053902.t1 | MTR_4g094638 | 50.794 | 63 | 31 | 0 | 1 | 63 | 8 | 70 | 1.18e-14 | 69.7 |
| MS.gene053902.t1 | MTR_8g033220 | 50.000 | 64 | 32 | 0 | 1 | 64 | 8 | 71 | 1.37e-14 | 70.5 |
| MS.gene053902.t1 | MTR_8g033220 | 50.000 | 64 | 32 | 0 | 1 | 64 | 8 | 71 | 1.43e-14 | 70.5 |
| MS.gene053902.t1 | MTR_4g109830 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 1.84e-14 | 70.1 |
| MS.gene053902.t1 | MTR_5g066180 | 29.050 | 179 | 95 | 6 | 1 | 171 | 8 | 162 | 2.00e-14 | 70.1 |
| MS.gene053902.t1 | MTR_1g101970 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 3.10e-14 | 68.9 |
| MS.gene053902.t1 | MTR_6g464720 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 4.53e-14 | 69.3 |
| MS.gene053902.t1 | MTR_4g084740 | 38.400 | 125 | 62 | 4 | 1 | 111 | 8 | 131 | 5.47e-14 | 70.1 |
| MS.gene053902.t1 | MTR_7g075870 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 8.11e-14 | 68.2 |
| MS.gene053902.t1 | MTR_1g053070 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 1.16e-13 | 68.2 |
| MS.gene053902.t1 | MTR_2g009890 | 42.857 | 70 | 40 | 0 | 1 | 70 | 8 | 77 | 2.20e-13 | 67.8 |
| MS.gene053902.t1 | MTR_5g031000 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.35e-13 | 67.0 |
| MS.gene053902.t1 | MTR_5g031000 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.41e-13 | 67.4 |
| MS.gene053902.t1 | MTR_5g032150 | 29.936 | 157 | 90 | 7 | 1 | 155 | 8 | 146 | 2.76e-13 | 67.0 |
| MS.gene053902.t1 | MTR_3g452380 | 45.161 | 62 | 34 | 0 | 1 | 62 | 23 | 84 | 3.00e-13 | 67.0 |
| MS.gene053902.t1 | MTR_8g022970 | 32.414 | 145 | 73 | 3 | 13 | 145 | 36 | 167 | 3.20e-13 | 65.9 |
| MS.gene053902.t1 | MTR_8g066260 | 29.630 | 162 | 96 | 4 | 1 | 161 | 8 | 152 | 3.74e-13 | 66.6 |
| MS.gene053902.t1 | MTR_3g109930 | 32.609 | 138 | 81 | 3 | 13 | 145 | 20 | 150 | 4.06e-13 | 65.5 |
| MS.gene053902.t1 | MTR_8g087860 | 46.774 | 62 | 33 | 0 | 1 | 62 | 24 | 85 | 4.09e-13 | 66.6 |
| MS.gene053902.t1 | MTR_2g461710 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 4.55e-13 | 62.4 |
| MS.gene053902.t1 | MTR_5g032520 | 50.000 | 64 | 31 | 1 | 1 | 63 | 8 | 71 | 5.91e-13 | 65.9 |
| MS.gene053902.t1 | MTR_0003s0590 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 6.30e-13 | 66.2 |
| MS.gene053902.t1 | MTR_1g029670 | 32.414 | 145 | 74 | 5 | 1 | 143 | 8 | 130 | 7.95e-13 | 64.7 |
| MS.gene053902.t1 | MTR_5g021270 | 33.113 | 151 | 78 | 6 | 1 | 149 | 8 | 137 | 1.04e-12 | 65.5 |
| MS.gene053902.t1 | MTR_3g113030 | 35.398 | 113 | 58 | 4 | 1 | 111 | 8 | 107 | 1.06e-12 | 65.5 |
| MS.gene053902.t1 | MTR_5g021270 | 33.113 | 151 | 78 | 6 | 1 | 149 | 8 | 137 | 1.10e-12 | 65.5 |
| MS.gene053902.t1 | MTR_2g017865 | 46.774 | 62 | 33 | 0 | 1 | 62 | 23 | 84 | 1.12e-12 | 65.9 |
| MS.gene053902.t1 | MTR_6g015975 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 1.66e-12 | 65.1 |
| MS.gene053902.t1 | MTR_3g102570 | 50.000 | 64 | 31 | 1 | 1 | 63 | 8 | 71 | 1.69e-12 | 65.9 |
| MS.gene053902.t1 | MTR_7g016630 | 45.455 | 66 | 35 | 1 | 1 | 65 | 8 | 73 | 1.70e-12 | 65.1 |
| MS.gene053902.t1 | MTR_7g016600 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 2.19e-12 | 64.7 |
| MS.gene053902.t1 | MTR_4g051538 | 30.370 | 135 | 77 | 4 | 9 | 141 | 23 | 142 | 3.75e-12 | 63.9 |
| MS.gene053902.t1 | MTR_5g066960 | 49.020 | 51 | 26 | 0 | 1 | 51 | 8 | 58 | 7.37e-12 | 59.3 |
| MS.gene053902.t1 | MTR_5g046790 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 1.05e-11 | 62.4 |
| MS.gene053902.t1 | MTR_3g437790 | 29.577 | 142 | 85 | 4 | 12 | 145 | 30 | 164 | 1.10e-11 | 62.0 |
| MS.gene053902.t1 | MTR_7g075850 | 46.053 | 76 | 38 | 1 | 1 | 73 | 8 | 83 | 1.12e-11 | 62.8 |
| MS.gene053902.t1 | MTR_3g088615 | 46.667 | 60 | 31 | 1 | 1 | 60 | 8 | 66 | 1.46e-11 | 61.2 |
| MS.gene053902.t1 | MTR_1g041615 | 42.857 | 77 | 43 | 1 | 6 | 81 | 17 | 93 | 1.60e-11 | 60.1 |
| MS.gene053902.t1 | MTR_1g038300 | 46.875 | 64 | 32 | 1 | 1 | 62 | 8 | 71 | 2.54e-11 | 61.6 |
| MS.gene053902.t1 | MTR_5g046870 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 2.86e-11 | 58.9 |
| MS.gene053902.t1 | MTR_4g109810 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 3.02e-11 | 61.6 |
| MS.gene053902.t1 | MTR_8g097090 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 3.94e-11 | 61.2 |
| MS.gene053902.t1 | MTR_3g084980 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 4.35e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053902.t1 | AT5G60440 | 46.995 | 183 | 87 | 4 | 1 | 179 | 13 | 189 | 6.90e-47 | 157 |
| MS.gene053902.t1 | AT2G24840 | 45.223 | 157 | 71 | 4 | 1 | 149 | 69 | 218 | 1.03e-35 | 127 |
| MS.gene053902.t1 | AT1G01530 | 43.503 | 177 | 90 | 4 | 3 | 178 | 15 | 182 | 2.78e-34 | 123 |
| MS.gene053902.t1 | AT1G65360 | 42.135 | 178 | 92 | 5 | 3 | 178 | 15 | 183 | 9.92e-33 | 118 |
| MS.gene053902.t1 | AT4G36590 | 41.935 | 155 | 78 | 4 | 1 | 146 | 13 | 164 | 4.84e-27 | 104 |
| MS.gene053902.t1 | AT1G72350 | 40.496 | 121 | 44 | 3 | 1 | 95 | 49 | 167 | 4.42e-18 | 80.1 |
| MS.gene053902.t1 | AT3G04100 | 37.931 | 116 | 63 | 4 | 1 | 113 | 20 | 129 | 6.46e-18 | 79.3 |
| MS.gene053902.t1 | AT2G34440 | 49.231 | 65 | 33 | 0 | 1 | 65 | 8 | 72 | 1.27e-17 | 77.4 |
| MS.gene053902.t1 | AT2G45660 | 55.556 | 63 | 28 | 0 | 1 | 63 | 8 | 70 | 1.96e-17 | 76.6 |
| MS.gene053902.t1 | AT2G45660 | 55.556 | 63 | 28 | 0 | 1 | 63 | 8 | 70 | 5.93e-17 | 76.6 |
| MS.gene053902.t1 | AT3G66656 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 1.56e-16 | 74.7 |
| MS.gene053902.t1 | AT4G22950 | 47.059 | 68 | 36 | 0 | 1 | 68 | 8 | 75 | 1.96e-16 | 74.3 |
| MS.gene053902.t1 | AT2G45650 | 56.452 | 62 | 27 | 0 | 1 | 62 | 8 | 69 | 4.35e-16 | 75.1 |
| MS.gene053902.t1 | AT4G22950 | 48.485 | 66 | 34 | 0 | 1 | 66 | 8 | 73 | 8.60e-16 | 73.6 |
| MS.gene053902.t1 | AT4G22950 | 48.485 | 66 | 34 | 0 | 1 | 66 | 8 | 73 | 8.60e-16 | 73.6 |
| MS.gene053902.t1 | AT5G51870 | 32.374 | 139 | 64 | 2 | 1 | 109 | 8 | 146 | 2.24e-15 | 72.4 |
| MS.gene053902.t1 | AT5G51870 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 4.08e-15 | 70.9 |
| MS.gene053902.t1 | AT5G51870 | 32.374 | 139 | 64 | 2 | 1 | 109 | 18 | 156 | 4.60e-15 | 72.0 |
| MS.gene053902.t1 | AT5G51870 | 32.374 | 139 | 64 | 2 | 1 | 109 | 8 | 146 | 4.69e-15 | 71.6 |
| MS.gene053902.t1 | AT3G54340 | 35.345 | 116 | 63 | 2 | 1 | 105 | 8 | 122 | 7.75e-15 | 71.2 |
| MS.gene053902.t1 | AT5G51870 | 53.226 | 62 | 29 | 0 | 1 | 62 | 31 | 92 | 9.95e-15 | 70.5 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.06e-14 | 68.2 |
| MS.gene053902.t1 | AT3G57230 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 1.26e-14 | 68.9 |
| MS.gene053902.t1 | AT2G22540 | 30.460 | 174 | 101 | 5 | 1 | 171 | 8 | 164 | 1.27e-14 | 70.9 |
| MS.gene053902.t1 | AT2G22540 | 30.460 | 174 | 101 | 5 | 1 | 171 | 8 | 164 | 1.27e-14 | 70.9 |
| MS.gene053902.t1 | AT1G28460 | 30.000 | 150 | 99 | 2 | 1 | 147 | 14 | 160 | 1.44e-14 | 69.7 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.54e-14 | 68.9 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.54e-14 | 68.9 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.54e-14 | 68.9 |
| MS.gene053902.t1 | AT4G37940 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 2.12e-14 | 69.7 |
| MS.gene053902.t1 | AT4G37940 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 2.16e-14 | 70.1 |
| MS.gene053902.t1 | AT4G37940 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 2.19e-14 | 68.9 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.94e-14 | 68.2 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.94e-14 | 68.2 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.94e-14 | 68.2 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.94e-14 | 68.2 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.94e-14 | 68.2 |
| MS.gene053902.t1 | AT4G09960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.26e-14 | 69.3 |
| MS.gene053902.t1 | AT4G09960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.44e-14 | 69.7 |
| MS.gene053902.t1 | AT1G17310 | 56.140 | 57 | 23 | 1 | 11 | 67 | 64 | 118 | 3.70e-14 | 69.3 |
| MS.gene053902.t1 | AT4G09960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 9 | 70 | 3.71e-14 | 69.3 |
| MS.gene053902.t1 | AT4G09960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 18 | 79 | 4.10e-14 | 69.3 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.12e-14 | 68.6 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.12e-14 | 68.6 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.45e-14 | 68.9 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.45e-14 | 68.9 |
| MS.gene053902.t1 | AT5G62165 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.45e-14 | 68.9 |
| MS.gene053902.t1 | AT4G09960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 34 | 95 | 5.15e-14 | 69.3 |
| MS.gene053902.t1 | AT1G17310 | 56.140 | 57 | 23 | 1 | 11 | 67 | 75 | 129 | 5.54e-14 | 68.9 |
| MS.gene053902.t1 | AT3G57230 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 6.07e-14 | 68.9 |
| MS.gene053902.t1 | AT3G57230 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 6.07e-14 | 68.9 |
| MS.gene053902.t1 | AT4G24540 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 7.55e-14 | 68.6 |
| MS.gene053902.t1 | AT4G09960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 103 | 164 | 8.88e-14 | 69.7 |
| MS.gene053902.t1 | AT3G30260 | 30.935 | 139 | 66 | 4 | 1 | 109 | 8 | 146 | 1.06e-13 | 68.6 |
| MS.gene053902.t1 | AT3G57390 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 1.15e-13 | 68.2 |
| MS.gene053902.t1 | AT5G51860 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.17e-13 | 67.4 |
| MS.gene053902.t1 | AT4G11880 | 47.761 | 67 | 34 | 1 | 1 | 66 | 8 | 74 | 1.46e-13 | 67.0 |
| MS.gene053902.t1 | AT4G11880 | 47.761 | 67 | 34 | 1 | 1 | 66 | 8 | 74 | 1.46e-13 | 67.0 |
| MS.gene053902.t1 | AT5G51860 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.71e-13 | 67.4 |
| MS.gene053902.t1 | AT4G11880 | 47.761 | 67 | 34 | 1 | 1 | 66 | 8 | 74 | 1.72e-13 | 67.4 |
| MS.gene053902.t1 | AT4G11880 | 47.761 | 67 | 34 | 1 | 1 | 66 | 8 | 74 | 1.72e-13 | 67.4 |
| MS.gene053902.t1 | AT3G57390 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 2.28e-13 | 67.8 |
| MS.gene053902.t1 | AT2G22630 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.09e-13 | 67.0 |
| MS.gene053902.t1 | AT2G22630 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.09e-13 | 67.0 |
| MS.gene053902.t1 | AT5G13790 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 4.19e-13 | 67.0 |
| MS.gene053902.t1 | AT5G13790 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 4.45e-13 | 67.0 |
| MS.gene053902.t1 | AT2G42830 | 46.774 | 62 | 33 | 0 | 1 | 62 | 23 | 84 | 5.46e-13 | 66.6 |
| MS.gene053902.t1 | AT1G77980 | 42.683 | 82 | 46 | 1 | 1 | 81 | 8 | 89 | 5.53e-13 | 67.4 |
| MS.gene053902.t1 | AT2G42830 | 46.774 | 62 | 33 | 0 | 1 | 62 | 23 | 84 | 5.81e-13 | 66.2 |
| MS.gene053902.t1 | AT4G18960 | 46.774 | 62 | 33 | 0 | 1 | 62 | 24 | 85 | 5.84e-13 | 66.6 |
| MS.gene053902.t1 | AT3G58780 | 46.774 | 62 | 33 | 0 | 1 | 62 | 23 | 84 | 6.55e-13 | 66.2 |
| MS.gene053902.t1 | AT3G58780 | 46.774 | 62 | 33 | 0 | 1 | 62 | 29 | 90 | 7.00e-13 | 66.2 |
| MS.gene053902.t1 | AT5G10140 | 46.970 | 66 | 34 | 1 | 1 | 65 | 8 | 73 | 7.35e-13 | 64.7 |
| MS.gene053902.t1 | AT5G60910 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 7.84e-13 | 65.9 |
| MS.gene053902.t1 | AT2G14210 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 8.19e-13 | 65.9 |
| MS.gene053902.t1 | AT5G10140 | 46.970 | 66 | 34 | 1 | 1 | 65 | 8 | 73 | 9.75e-13 | 64.7 |
| MS.gene053902.t1 | AT2G14210 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 1.08e-12 | 65.5 |
| MS.gene053902.t1 | AT3G61120 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.13e-12 | 65.5 |
| MS.gene053902.t1 | AT1G77950 | 46.875 | 64 | 33 | 1 | 1 | 63 | 8 | 71 | 1.17e-12 | 65.5 |
| MS.gene053902.t1 | AT1G77950 | 46.875 | 64 | 33 | 1 | 1 | 63 | 8 | 71 | 1.17e-12 | 65.5 |
| MS.gene053902.t1 | AT1G77950 | 46.875 | 64 | 33 | 1 | 1 | 63 | 8 | 71 | 1.17e-12 | 65.5 |
| MS.gene053902.t1 | AT1G77950 | 46.875 | 64 | 33 | 1 | 1 | 63 | 8 | 71 | 1.17e-12 | 65.5 |
| MS.gene053902.t1 | AT5G10140 | 46.970 | 66 | 34 | 1 | 1 | 65 | 8 | 73 | 1.22e-12 | 64.7 |
| MS.gene053902.t1 | AT1G22130 | 38.095 | 105 | 61 | 2 | 1 | 101 | 8 | 112 | 1.25e-12 | 66.2 |
| MS.gene053902.t1 | AT5G10140 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 1.46e-12 | 64.3 |
| MS.gene053902.t1 | AT3G58780 | 46.774 | 62 | 33 | 0 | 1 | 62 | 23 | 84 | 1.69e-12 | 65.5 |
| MS.gene053902.t1 | AT2G22540 | 31.609 | 174 | 94 | 7 | 1 | 171 | 8 | 159 | 2.14e-12 | 64.7 |
| MS.gene053902.t1 | AT1G26310 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 2.30e-12 | 64.7 |
| MS.gene053902.t1 | AT1G71692 | 48.438 | 64 | 32 | 1 | 1 | 63 | 8 | 71 | 2.46e-12 | 63.9 |
| MS.gene053902.t1 | AT5G23260 | 44.872 | 78 | 37 | 2 | 1 | 72 | 24 | 101 | 2.53e-12 | 64.7 |
| MS.gene053902.t1 | AT5G23260 | 44.872 | 78 | 37 | 2 | 1 | 72 | 24 | 101 | 2.69e-12 | 64.7 |
| MS.gene053902.t1 | AT5G23260 | 44.872 | 78 | 37 | 2 | 1 | 72 | 8 | 85 | 2.69e-12 | 64.7 |
| MS.gene053902.t1 | AT5G23260 | 44.872 | 78 | 37 | 2 | 1 | 72 | 8 | 85 | 2.84e-12 | 64.3 |
| MS.gene053902.t1 | AT1G69120 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 3.00e-12 | 64.3 |
| MS.gene053902.t1 | AT1G29962 | 28.105 | 153 | 101 | 4 | 1 | 147 | 14 | 163 | 3.58e-12 | 63.2 |
| MS.gene053902.t1 | AT1G69120 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 5.07e-12 | 63.9 |
| MS.gene053902.t1 | AT5G15800 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 5.27e-12 | 63.9 |
| MS.gene053902.t1 | AT5G15800 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 8.02e-12 | 63.5 |
| MS.gene053902.t1 | AT5G20240 | 45.312 | 64 | 33 | 1 | 1 | 62 | 8 | 71 | 1.36e-11 | 62.0 |
| MS.gene053902.t1 | AT2G03710 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 1.51e-11 | 61.6 |
| MS.gene053902.t1 | AT5G20240 | 45.312 | 64 | 33 | 1 | 1 | 62 | 8 | 71 | 1.73e-11 | 60.5 |
| MS.gene053902.t1 | AT1G24260 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 2.83e-11 | 61.6 |
| MS.gene053902.t1 | AT1G24260 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 2.93e-11 | 61.6 |
| MS.gene053902.t1 | AT1G24260 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 3.04e-11 | 61.6 |
| MS.gene053902.t1 | AT2G03710 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 3.41e-11 | 61.6 |
| MS.gene053902.t1 | AT2G03710 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 3.50e-11 | 61.6 |
| MS.gene053902.t1 | AT1G46408 | 36.441 | 118 | 65 | 5 | 1 | 114 | 10 | 121 | 4.60e-11 | 61.2 |
| MS.gene053902.t1 | AT1G28450 | 26.220 | 164 | 112 | 4 | 1 | 158 | 14 | 174 | 4.95e-11 | 60.1 |
| MS.gene053902.t1 | AT3G02310 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 6.05e-11 | 60.1 |
Find 47 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGCATAATGTCATCATTT+TGG | 0.101036 | 5.3:-43372313 | None:intergenic |
| TTTATTTGGCTTCAATAATA+TGG | 0.142453 | 5.3:+43372718 | MS.gene053902:CDS |
| ATGTTTCAACCTCATTTATT+TGG | 0.202774 | 5.3:+43372704 | MS.gene053902:CDS |
| ATCGAATCTTGTTCAAGATT+TGG | 0.295271 | 5.3:-43372656 | None:intergenic |
| TCTATGACCGTTTCAACATT+TGG | 0.308343 | 5.3:-43372266 | None:intergenic |
| GGTCAACTTGTCCATTTGAT+AGG | 0.320863 | 5.3:+43372471 | MS.gene053902:CDS |
| TGAATCATTCAAGAAGGCTT+TGG | 0.361264 | 5.3:+43372511 | MS.gene053902:CDS |
| CTATGACCGTTTCAACATTT+GGG | 0.365857 | 5.3:-43372265 | None:intergenic |
| TTATTTGGCTTCAATAATAT+GGG | 0.386621 | 5.3:+43372719 | MS.gene053902:CDS |
| AGTGAGAAGGTCTTCTCATT+TGG | 0.404009 | 5.3:+43372239 | MS.gene053902:CDS |
| GGCAACTGCGAAAGAATAAC+GGG | 0.412211 | 5.3:+43372438 | MS.gene053902:CDS |
| ATGCTCAAACGACATGTTAG+AGG | 0.413822 | 5.3:-43372630 | None:intergenic |
| ATAAATGAGGTTGAAACATT+GGG | 0.423985 | 5.3:-43372700 | None:intergenic |
| AGTGAGCTTTGCACCCTTTG+TGG | 0.424656 | 5.3:+43372185 | MS.gene053902:CDS |
| TAGCAATGAAAGCAACCTTC+AGG | 0.435188 | 5.3:+43372121 | MS.gene053902:CDS |
| ACAAAATTCATCCTATCAAA+TGG | 0.436863 | 5.3:-43372482 | None:intergenic |
| TGCTGATAAGGTTGAAATCC+AGG | 0.437169 | 5.3:+43372562 | MS.gene053902:CDS |
| TGTTGCACATTATGCTGATA+AGG | 0.451161 | 5.3:+43372550 | MS.gene053902:CDS |
| AATAAATGAGGTTGAAACAT+TGG | 0.452635 | 5.3:-43372701 | None:intergenic |
| CATAGATCATTATCTCTCTC+AGG | 0.470831 | 5.3:+43372283 | MS.gene053902:CDS |
| CCTTCTTGAATGATTCAAGT+TGG | 0.473474 | 5.3:-43372505 | None:intergenic |
| CCAACTTGAATCATTCAAGA+AGG | 0.481167 | 5.3:+43372505 | MS.gene053902:CDS |
| ATCATTCAAGAAGGCTTTGG+AGG | 0.496315 | 5.3:+43372514 | MS.gene053902:CDS |
| AATAATATGGGAGGAGAAGG+TGG | 0.510617 | 5.3:+43372731 | MS.gene053902:CDS |
| AGGCAACTGCGAAAGAATAA+CGG | 0.517605 | 5.3:+43372437 | MS.gene053902:CDS |
| TTCAATAATATGGGAGGAGA+AGG | 0.523654 | 5.3:+43372728 | MS.gene053902:CDS |
| TGGTCACCCAAATGTTGAAA+CGG | 0.524927 | 5.3:+43372259 | MS.gene053902:CDS |
| AGCGATATATGCACCACAAA+GGG | 0.537976 | 5.3:-43372198 | None:intergenic |
| GCTCGCGCACACTAGCATTA+CGG | 0.539420 | 5.3:-43372349 | None:intergenic |
| ATGGGAGGAGAAGGTGGGCA+TGG | 0.547684 | 5.3:+43372737 | MS.gene053902:CDS |
| TGACATTATGCGATTCATAG+AGG | 0.556258 | 5.3:+43372322 | MS.gene053902:CDS |
| ACTTTCTCAAAGCGCCGTAG+TGG | 0.560981 | 5.3:+43372146 | MS.gene053902:CDS |
| CTTTCTCAAAGCGCCGTAGT+GGG | 0.568304 | 5.3:+43372147 | MS.gene053902:CDS |
| TTATTGAAGCCAAATAAATG+AGG | 0.584472 | 5.3:-43372713 | None:intergenic |
| TTTGGCTTCAATAATATGGG+AGG | 0.603750 | 5.3:+43372722 | MS.gene053902:CDS |
| TATATTCTCACCTAGTGAGA+AGG | 0.609022 | 5.3:+43372226 | MS.gene053902:CDS |
| ATAATATGGGAGGAGAAGGT+GGG | 0.618375 | 5.3:+43372732 | MS.gene053902:CDS |
| GCTGATAAGGTTGAAATCCA+GGG | 0.621876 | 5.3:+43372563 | MS.gene053902:CDS |
| AATGAGAAGACCTTCTCACT+AGG | 0.625869 | 5.3:-43372236 | None:intergenic |
| CTTTCTTGAAGAGCCCACTA+CGG | 0.627906 | 5.3:-43372160 | None:intergenic |
| GCTTTGAGAAAGTCACCTGA+AGG | 0.631860 | 5.3:-43372136 | None:intergenic |
| GGGGTTGGGTAGAAGTACCC+TGG | 0.634945 | 5.3:-43372580 | None:intergenic |
| GAGCGATATATGCACCACAA+AGG | 0.634962 | 5.3:-43372199 | None:intergenic |
| GTTGCCTCAGATCATTCGCA+CGG | 0.643396 | 5.3:-43372421 | None:intergenic |
| TCTGATCAAAAGAACTCATG+AGG | 0.644620 | 5.3:-43372761 | None:intergenic |
| AGAACCGTGCGAATGATCTG+AGG | 0.656249 | 5.3:+43372417 | MS.gene053902:CDS |
| GCAACTGCGAAAGAATAACG+GGG | 0.785435 | 5.3:+43372439 | MS.gene053902:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCAACAAAAAATGGAA+GGG | - | chr5.3:43372603-43372622 | None:intergenic | 20.0% |
| !!! | TTATTTGGCTTCAATAATAT+GGG | + | chr5.3:43372719-43372738 | MS.gene053902:CDS | 20.0% |
| !!! | TTTATTTGGCTTCAATAATA+TGG | + | chr5.3:43372718-43372737 | MS.gene053902:CDS | 20.0% |
| ! | AATAAATGAGGTTGAAACAT+TGG | - | chr5.3:43372704-43372723 | None:intergenic | 25.0% |
| ! | ACAAAATTCATCCTATCAAA+TGG | - | chr5.3:43372485-43372504 | None:intergenic | 25.0% |
| ! | ATAAATGAGGTTGAAACATT+GGG | - | chr5.3:43372703-43372722 | None:intergenic | 25.0% |
| ! | ATGTTTCAACCTCATTTATT+TGG | + | chr5.3:43372704-43372723 | MS.gene053902:CDS | 25.0% |
| ! | TTATTGAAGCCAAATAAATG+AGG | - | chr5.3:43372716-43372735 | None:intergenic | 25.0% |
| !! | CATTTTCAACAAAAAATGGA+AGG | - | chr5.3:43372604-43372623 | None:intergenic | 25.0% |
| !! | GAACCATTTTCAACAAAAAA+TGG | - | chr5.3:43372608-43372627 | None:intergenic | 25.0% |
| !! | TTTTCAACAAAAAATGGAAG+GGG | - | chr5.3:43372602-43372621 | None:intergenic | 25.0% |
| !!! | CTTCCATTTTTTGTTGAAAA+TGG | + | chr5.3:43372602-43372621 | MS.gene053902:CDS | 25.0% |
| ATCGAATCTTGTTCAAGATT+TGG | - | chr5.3:43372659-43372678 | None:intergenic | 30.0% | |
| GGTTATGTAAAAATTCTGCT+AGG | - | chr5.3:43372682-43372701 | None:intergenic | 30.0% | |
| ! | ATCGCATAATGTCATCATTT+TGG | - | chr5.3:43372316-43372335 | None:intergenic | 30.0% |
| ! | TCGCATAATGTCATCATTTT+GGG | - | chr5.3:43372315-43372334 | None:intergenic | 30.0% |
| AACAAAAAATGGAAGGGGTT+GGG | - | chr5.3:43372597-43372616 | None:intergenic | 35.0% | |
| CATAGATCATTATCTCTCTC+AGG | + | chr5.3:43372283-43372302 | MS.gene053902:CDS | 35.0% | |
| CCAACTTGAATCATTCAAGA+AGG | + | chr5.3:43372505-43372524 | MS.gene053902:CDS | 35.0% | |
| CCTTCTTGAATGATTCAAGT+TGG | - | chr5.3:43372508-43372527 | None:intergenic | 35.0% | |
| CTATGACCGTTTCAACATTT+GGG | - | chr5.3:43372268-43372287 | None:intergenic | 35.0% | |
| TATATTCTCACCTAGTGAGA+AGG | + | chr5.3:43372226-43372245 | MS.gene053902:CDS | 35.0% | |
| TCTATGACCGTTTCAACATT+TGG | - | chr5.3:43372269-43372288 | None:intergenic | 35.0% | |
| TGAATCATTCAAGAAGGCTT+TGG | + | chr5.3:43372511-43372530 | MS.gene053902:CDS | 35.0% | |
| TGACATTATGCGATTCATAG+AGG | + | chr5.3:43372322-43372341 | MS.gene053902:CDS | 35.0% | |
| TGTTGCACATTATGCTGATA+AGG | + | chr5.3:43372550-43372569 | MS.gene053902:CDS | 35.0% | |
| TTCAATAATATGGGAGGAGA+AGG | + | chr5.3:43372728-43372747 | MS.gene053902:CDS | 35.0% | |
| ! | CGCATAATGTCATCATTTTG+GGG | - | chr5.3:43372314-43372333 | None:intergenic | 35.0% |
| ! | TTTGGCTTCAATAATATGGG+AGG | + | chr5.3:43372722-43372741 | MS.gene053902:CDS | 35.0% |
| !! | AGAATAACGGGGCTAATTTT+TGG | + | chr5.3:43372450-43372469 | MS.gene053902:CDS | 35.0% |
| !! | ATAATGTCATCATTTTGGGG+TGG | - | chr5.3:43372311-43372330 | None:intergenic | 35.0% |
| !!! | TAATGTCATCATTTTGGGGT+GGG | - | chr5.3:43372310-43372329 | None:intergenic | 35.0% |
| AATAATATGGGAGGAGAAGG+TGG | + | chr5.3:43372731-43372750 | MS.gene053902:CDS | 40.0% | |
| AATGAGAAGACCTTCTCACT+AGG | - | chr5.3:43372239-43372258 | None:intergenic | 40.0% | |
| AGCGATATATGCACCACAAA+GGG | - | chr5.3:43372201-43372220 | None:intergenic | 40.0% | |
| AGGCAACTGCGAAAGAATAA+CGG | + | chr5.3:43372437-43372456 | MS.gene053902:CDS | 40.0% | |
| AGTGAGAAGGTCTTCTCATT+TGG | + | chr5.3:43372239-43372258 | MS.gene053902:CDS | 40.0% | |
| ATAATATGGGAGGAGAAGGT+GGG | + | chr5.3:43372732-43372751 | MS.gene053902:CDS | 40.0% | |
| ATGCTCAAACGACATGTTAG+AGG | - | chr5.3:43372633-43372652 | None:intergenic | 40.0% | |
| CAACAAAAAATGGAAGGGGT+TGG | - | chr5.3:43372598-43372617 | None:intergenic | 40.0% | |
| GCTGATAAGGTTGAAATCCA+GGG | + | chr5.3:43372563-43372582 | MS.gene053902:CDS | 40.0% | |
| GGTCAACTTGTCCATTTGAT+AGG | + | chr5.3:43372471-43372490 | MS.gene053902:CDS | 40.0% | |
| TAGCAATGAAAGCAACCTTC+AGG | + | chr5.3:43372121-43372140 | MS.gene053902:CDS | 40.0% | |
| TGCTGATAAGGTTGAAATCC+AGG | + | chr5.3:43372562-43372581 | MS.gene053902:CDS | 40.0% | |
| TGGTCACCCAAATGTTGAAA+CGG | + | chr5.3:43372259-43372278 | MS.gene053902:CDS | 40.0% | |
| ! | ATCATTCAAGAAGGCTTTGG+AGG | + | chr5.3:43372514-43372533 | MS.gene053902:CDS | 40.0% |
| CTTTCTTGAAGAGCCCACTA+CGG | - | chr5.3:43372163-43372182 | None:intergenic | 45.0% | |
| GAGCGATATATGCACCACAA+AGG | - | chr5.3:43372202-43372221 | None:intergenic | 45.0% | |
| GCAACTGCGAAAGAATAACG+GGG | + | chr5.3:43372439-43372458 | MS.gene053902:CDS | 45.0% | |
| GGCAACTGCGAAAGAATAAC+GGG | + | chr5.3:43372438-43372457 | MS.gene053902:CDS | 45.0% | |
| !! | GCTTTGAGAAAGTCACCTGA+AGG | - | chr5.3:43372139-43372158 | None:intergenic | 45.0% |
| AGAACCGTGCGAATGATCTG+AGG | + | chr5.3:43372417-43372436 | MS.gene053902:CDS | 50.0% | |
| AGTGAGCTTTGCACCCTTTG+TGG | + | chr5.3:43372185-43372204 | MS.gene053902:CDS | 50.0% | |
| GTTGCCTCAGATCATTCGCA+CGG | - | chr5.3:43372424-43372443 | None:intergenic | 50.0% | |
| !! | ACTTTCTCAAAGCGCCGTAG+TGG | + | chr5.3:43372146-43372165 | MS.gene053902:CDS | 50.0% |
| !! | CTTTCTCAAAGCGCCGTAGT+GGG | + | chr5.3:43372147-43372166 | MS.gene053902:CDS | 50.0% |
| GCTCGCGCACACTAGCATTA+CGG | - | chr5.3:43372352-43372371 | None:intergenic | 55.0% | |
| ATGGGAGGAGAAGGTGGGCA+TGG | + | chr5.3:43372737-43372756 | MS.gene053902:CDS | 60.0% | |
| !! | GGGGTTGGGTAGAAGTACCC+TGG | - | chr5.3:43372583-43372602 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 43372110 | 43372778 | 43372110 | ID=MS.gene053902 |
| chr5.3 | mRNA | 43372110 | 43372778 | 43372110 | ID=MS.gene053902.t1;Parent=MS.gene053902 |
| chr5.3 | exon | 43372110 | 43372778 | 43372110 | ID=MS.gene053902.t1.exon1;Parent=MS.gene053902.t1 |
| chr5.3 | CDS | 43372110 | 43372778 | 43372110 | ID=cds.MS.gene053902.t1;Parent=MS.gene053902.t1 |
| Gene Sequence |
| Protein sequence |
