AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054337

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054337.t1 MTR_6g042310 92.625 461 32 1 1 459 1 461 0.0 880
MS.gene054337.t1 MTR_2g046620 73.203 459 123 0 1 459 1 459 0.0 711
MS.gene054337.t1 MTR_4g123553 73.568 454 118 2 7 459 6 458 0.0 706
MS.gene054337.t1 MTR_4g077960 76.552 435 102 0 25 459 1 435 0.0 691
MS.gene054337.t1 MTR_2g008220 71.121 464 125 4 1 458 1 461 0.0 670
MS.gene054337.t1 MTR_2g008225 69.612 464 133 4 1 458 1 462 0.0 660
MS.gene054337.t1 MTR_6g036650 69.723 469 131 4 1 459 1 468 0.0 658
MS.gene054337.t1 MTR_3g435310 64.147 463 116 4 1 459 1 417 0.0 587
MS.gene054337.t1 MTR_2g008226 54.641 474 187 9 8 460 2 468 0.0 520
MS.gene054337.t1 MTR_8g068360 42.208 462 244 6 13 458 9 463 4.69e-126 377
MS.gene054337.t1 MTR_8g068340 41.239 468 249 7 13 462 9 468 5.43e-121 364
MS.gene054337.t1 MTR_8g068330 39.785 465 256 8 13 460 5 462 6.02e-116 351
MS.gene054337.t1 MTR_7g067330 40.044 452 235 9 13 459 6 426 1.59e-109 333
MS.gene054337.t1 MTR_7g067120 39.732 448 240 7 10 455 3 422 4.68e-103 317
MS.gene054337.t1 MTR_8g007565 37.500 464 271 8 14 461 5 465 5.77e-100 310
MS.gene054337.t1 MTR_8g007650 37.500 464 271 8 14 461 5 465 1.02e-99 309
MS.gene054337.t1 MTR_5g066410 35.076 459 264 9 19 461 1 441 1.39e-84 269
MS.gene054337.t1 MTR_4g079270 35.217 460 272 15 15 459 7 455 2.35e-71 235
MS.gene054337.t1 MTR_4g079250 35.870 460 269 16 15 459 7 455 9.98e-71 233
MS.gene054337.t1 MTR_1g090270 32.128 470 287 9 9 460 8 463 2.21e-67 225
MS.gene054337.t1 MTR_2g014900 31.602 462 287 13 15 460 6 454 1.07e-66 223
MS.gene054337.t1 MTR_2g083430 31.965 463 285 14 15 460 7 456 1.08e-56 196
MS.gene054337.t1 MTR_2g083480 32.258 465 277 14 15 458 7 454 2.42e-55 192
MS.gene054337.t1 MTR_2g083380 32.340 470 282 15 10 459 19 472 3.94e-55 192
MS.gene054337.t1 MTR_2g083490 32.340 470 282 16 10 459 2 455 8.23e-55 191
MS.gene054337.t1 MTR_2g083420 29.694 458 274 17 15 458 7 430 2.81e-48 173
MS.gene054337.t1 MTR_2g083390 28.976 459 276 17 15 458 7 430 1.89e-46 168
MS.gene054337.t1 MTR_8g009055 30.087 462 275 16 13 443 3 447 9.66e-43 159
MS.gene054337.t1 MTR_4g485630 29.067 461 286 16 9 440 3 451 1.61e-41 155
MS.gene054337.t1 MTR_4g059370 33.013 312 187 8 159 460 91 390 2.81e-40 150
MS.gene054337.t1 MTR_8g009063 27.430 463 286 14 13 443 10 454 6.24e-39 148
MS.gene054337.t1 MTR_8g009050 28.814 472 298 14 13 458 3 462 2.00e-38 147
MS.gene054337.t1 MTR_6g488280 28.785 469 288 15 8 450 2 450 2.85e-37 143
MS.gene054337.t1 MTR_0428s0010 28.785 469 288 15 8 450 2 450 2.85e-37 143
MS.gene054337.t1 MTR_5g035560 26.844 488 285 14 8 460 3 453 3.74e-37 144
MS.gene054337.t1 MTR_3g008010 28.696 460 281 18 16 441 10 456 3.97e-37 143
MS.gene054337.t1 MTR_8g008990 29.399 466 275 17 13 443 3 449 7.93e-37 142
MS.gene054337.t1 MTR_6g023665 29.067 461 283 17 3 437 4 446 8.08e-37 142
MS.gene054337.t1 MTR_4g031800 28.043 460 280 15 12 437 5 447 9.70e-37 142
MS.gene054337.t1 MTR_8g009073 27.983 461 284 16 13 443 3 445 9.84e-37 142
MS.gene054337.t1 MTR_2g098430 26.915 457 291 18 17 441 7 452 5.43e-36 140
MS.gene054337.t1 MTR_8g006730 28.051 467 284 16 13 445 3 451 6.65e-36 140
MS.gene054337.t1 MTR_5g087620 26.778 478 290 19 13 447 7 467 1.19e-35 139
MS.gene054337.t1 MTR_7g117170 28.602 472 291 16 17 458 16 471 1.70e-35 139
MS.gene054337.t1 MTR_2g034990 27.155 464 288 14 13 439 8 458 7.83e-35 137
MS.gene054337.t1 MTR_1g019510 26.407 462 277 14 13 437 3 438 1.12e-34 136
MS.gene054337.t1 MTR_8g066610 26.767 467 295 15 15 445 8 463 1.58e-34 136
MS.gene054337.t1 MTR_5g035580 26.122 490 293 15 4 460 2 455 2.01e-34 135
MS.gene054337.t1 MTR_5g045960 26.427 473 291 14 13 442 6 464 3.04e-34 135
MS.gene054337.t1 MTR_1g062380 28.913 460 273 18 14 431 14 461 3.50e-34 135
MS.gene054337.t1 MTR_2g035020 27.586 464 282 16 15 439 10 458 6.72e-34 134
MS.gene054337.t1 MTR_6g014290 27.293 458 286 18 16 439 10 454 9.23e-34 134
MS.gene054337.t1 MTR_1g019520 38.542 192 96 4 270 443 6 193 3.94e-33 126
MS.gene054337.t1 MTR_8g006710 26.749 486 304 18 17 475 7 467 8.94e-33 130
MS.gene054337.t1 MTR_8g032950 26.722 479 269 17 13 439 9 457 1.17e-32 130
MS.gene054337.t1 MTR_8g009067 29.103 457 284 16 13 443 3 445 1.39e-32 130
MS.gene054337.t1 MTR_4g117980 26.882 465 288 17 13 439 8 458 1.42e-32 130
MS.gene054337.t1 MTR_3g049970 28.512 477 297 17 15 460 8 471 1.72e-32 130
MS.gene054337.t1 MTR_5g045970 27.391 460 292 19 14 439 14 465 1.75e-32 130
MS.gene054337.t1 MTR_0078s0010 28.233 464 270 21 12 437 2 440 3.08e-32 129
MS.gene054337.t1 MTR_6g014220 27.473 455 289 17 16 439 10 454 3.85e-32 129
MS.gene054337.t1 MTR_4g117890 27.079 469 291 17 4 439 1 451 4.16e-32 129
MS.gene054337.t1 MTR_7g046490 28.387 465 236 17 16 426 6 427 4.82e-32 129
MS.gene054337.t1 MTR_6g035185 25.427 468 292 14 13 439 8 459 5.80e-32 129
MS.gene054337.t1 MTR_0288s0020 28.132 455 269 17 16 439 10 437 7.27e-32 128
MS.gene054337.t1 MTR_8g008970 27.292 469 287 15 13 449 3 449 7.70e-32 130
MS.gene054337.t1 MTR_8g008970 33.824 204 128 2 240 443 573 769 3.66e-26 113
MS.gene054337.t1 MTR_0184s0030 34.762 210 121 3 243 437 234 442 7.81e-32 128
MS.gene054337.t1 MTR_7g102460 27.189 434 269 18 15 411 8 431 8.21e-32 129
MS.gene054337.t1 MTR_6g033625 27.155 464 302 16 17 456 5 456 8.95e-32 128
MS.gene054337.t1 MTR_1g107350 28.898 481 267 21 15 447 7 460 9.04e-32 128
MS.gene054337.t1 MTR_7g047030 27.571 457 282 16 12 437 2 440 1.10e-31 127
MS.gene054337.t1 MTR_7g047270 27.571 457 282 16 12 437 2 440 1.10e-31 127
MS.gene054337.t1 MTR_7g102490 27.512 418 271 12 15 405 8 420 1.50e-31 128
MS.gene054337.t1 MTR_8g009073 34.450 209 122 3 248 443 110 316 1.86e-31 124
MS.gene054337.t1 MTR_8g027885 26.144 459 271 15 17 437 19 447 3.06e-31 126
MS.gene054337.t1 MTR_8g009067 29.909 331 201 10 134 443 7 327 3.69e-31 124
MS.gene054337.t1 MTR_7g070610 25.536 466 296 15 15 441 12 465 8.31e-31 125
MS.gene054337.t1 MTR_0078s0060 26.154 455 290 15 12 437 2 439 1.04e-30 125
MS.gene054337.t1 MTR_5g019580 35.616 219 117 5 237 436 239 452 1.82e-30 124
MS.gene054337.t1 MTR_5g019580 35.616 219 117 5 237 436 263 476 2.28e-30 124
MS.gene054337.t1 MTR_0184s0040 26.552 467 290 18 4 437 9 455 2.91e-30 124
MS.gene054337.t1 MTR_0078s0190 26.552 467 290 18 4 437 9 455 2.91e-30 124
MS.gene054337.t1 MTR_8g074550 27.063 521 296 18 13 480 5 494 3.52e-30 124
MS.gene054337.t1 MTR_8g006220 26.834 477 276 18 8 437 2 452 3.87e-30 123
MS.gene054337.t1 MTR_8g465670 26.407 462 289 18 8 437 3 445 3.91e-30 123
MS.gene054337.t1 MTR_2g086283 27.111 450 202 15 19 459 1 333 4.15e-30 120
MS.gene054337.t1 MTR_4g094220 24.622 463 296 17 16 439 7 455 4.28e-30 123
MS.gene054337.t1 MTR_8g012745 33.333 243 142 4 216 442 210 448 8.21e-30 122
MS.gene054337.t1 MTR_6g033615 26.882 465 288 15 17 456 5 442 9.12e-30 122
MS.gene054337.t1 MTR_7g117405 28.182 440 276 14 16 425 12 441 9.26e-30 122
MS.gene054337.t1 MTR_6g014250 26.638 458 293 17 16 441 10 456 9.34e-30 122
MS.gene054337.t1 MTR_4g117960 25.161 465 283 16 19 439 14 457 9.86e-30 122
MS.gene054337.t1 MTR_6g013440 26.013 469 286 18 13 439 8 457 1.29e-29 122
MS.gene054337.t1 MTR_6g014040 25.591 465 302 16 9 439 3 457 1.32e-29 122
MS.gene054337.t1 MTR_0009s0240 27.818 417 245 16 16 400 7 399 1.41e-29 121
MS.gene054337.t1 MTR_7g070660 25.108 462 292 15 15 438 10 455 1.68e-29 122
MS.gene054337.t1 MTR_7g102450 26.503 449 265 17 16 426 11 432 1.90e-29 121
MS.gene054337.t1 MTR_1g107375 28.000 450 275 14 14 439 6 430 2.17e-29 121
MS.gene054337.t1 MTR_3g009510 25.751 466 288 14 17 439 6 456 4.10e-29 120
MS.gene054337.t1 MTR_6g033725 27.703 444 286 16 17 437 5 436 4.29e-29 120
MS.gene054337.t1 MTR_5g029800 23.491 464 301 16 13 439 8 454 4.92e-29 120
MS.gene054337.t1 MTR_2g008210 26.754 456 291 15 16 440 11 454 5.34e-29 120
MS.gene054337.t1 MTR_5g067170 23.110 463 306 11 13 439 8 456 5.89e-29 120
MS.gene054337.t1 MTR_6g014270 24.026 462 300 16 16 439 7 455 8.84e-29 119
MS.gene054337.t1 MTR_8g071070 30.120 415 248 17 16 400 7 409 9.95e-29 119
MS.gene054337.t1 MTR_2g083360 25.110 454 219 13 15 458 28 370 1.33e-28 117
MS.gene054337.t1 MTR_0036s0220 25.658 456 297 17 16 441 12 455 1.60e-28 119
MS.gene054337.t1 MTR_4g117950 25.319 470 293 15 13 449 3 447 1.62e-28 119
MS.gene054337.t1 MTR_6g038240 25.000 428 300 11 16 434 11 426 1.79e-28 118
MS.gene054337.t1 MTR_7g102550 26.694 487 280 22 1 437 1 460 2.01e-28 118
MS.gene054337.t1 MTR_4g024020 27.368 475 279 22 15 440 8 465 2.08e-28 119
MS.gene054337.t1 MTR_6g013990 30.796 289 175 12 162 439 180 454 2.42e-28 118
MS.gene054337.t1 MTR_8g012635 32.083 240 142 5 216 437 210 446 2.44e-28 118
MS.gene054337.t1 MTR_7g070780 24.894 470 287 18 15 438 10 459 2.47e-28 118
MS.gene054337.t1 MTR_6g011340 26.419 458 292 15 16 439 10 456 2.66e-28 118
MS.gene054337.t1 MTR_7g071040 24.784 464 302 14 15 441 16 469 2.99e-28 118
MS.gene054337.t1 MTR_8g027870 25.000 472 260 14 17 437 19 447 3.34e-28 117
MS.gene054337.t1 MTR_6g005600 36.269 193 104 5 269 443 258 449 4.59e-28 117
MS.gene054337.t1 MTR_7g070800 24.565 460 298 14 15 438 5 451 5.05e-28 117
MS.gene054337.t1 MTR_0536s0010 25.325 462 288 15 13 441 18 455 7.22e-28 117
MS.gene054337.t1 MTR_8g012730 36.181 199 108 4 257 437 86 283 7.98e-28 114
MS.gene054337.t1 MTR_6g038300 22.650 468 287 15 16 445 11 441 1.08e-27 116
MS.gene054337.t1 MTR_8g006270 28.000 375 218 11 87 431 81 433 1.15e-27 116
MS.gene054337.t1 MTR_7g070930 25.362 414 279 13 15 404 13 420 1.69e-27 116
MS.gene054337.t1 MTR_1g107315 28.605 430 267 15 16 418 8 424 1.76e-27 115
MS.gene054337.t1 MTR_6g014187 24.622 463 304 16 13 441 7 458 2.21e-27 115
MS.gene054337.t1 MTR_7g102560 25.979 485 304 20 15 458 8 478 2.35e-27 115
MS.gene054337.t1 MTR_4g485620 26.535 456 268 16 28 440 1 432 2.38e-27 115
MS.gene054337.t1 MTR_0536s0020 26.350 463 282 17 13 438 15 455 3.00e-27 115
MS.gene054337.t1 MTR_6g013960 24.204 471 296 16 13 441 7 458 3.21e-27 115
MS.gene054337.t1 MTR_5g464810 26.696 457 291 18 16 441 12 455 3.40e-27 115
MS.gene054337.t1 MTR_5g064240 26.696 457 291 18 16 441 12 455 3.40e-27 115
MS.gene054337.t1 MTR_8g059425 25.658 456 296 18 16 439 10 454 3.70e-27 115
MS.gene054337.t1 MTR_8g012630 36.898 187 99 4 269 437 205 390 4.36e-27 114
MS.gene054337.t1 MTR_7g055710 24.783 460 300 16 15 438 10 459 4.37e-27 114
MS.gene054337.t1 MTR_7g102520 27.873 409 236 16 15 384 11 399 4.70e-27 114
MS.gene054337.t1 MTR_6g014170 26.067 445 296 15 16 441 10 440 5.09e-27 114
MS.gene054337.t1 MTR_1g029540 29.508 244 147 6 217 443 205 440 5.17e-27 114
MS.gene054337.t1 MTR_6g014020 26.464 461 288 19 16 439 10 456 5.58e-27 114
MS.gene054337.t1 MTR_1g032490 27.664 441 291 14 8 427 2 435 5.70e-27 114
MS.gene054337.t1 MTR_7g070860 23.799 458 294 15 13 438 4 438 6.56e-27 114
MS.gene054337.t1 MTR_7g070940 23.593 462 296 17 13 437 6 447 6.90e-27 114
MS.gene054337.t1 MTR_6g038230 25.855 468 298 16 16 458 11 454 7.45e-27 113
MS.gene054337.t1 MTR_8g012650 31.250 240 144 5 216 437 210 446 1.03e-26 113
MS.gene054337.t1 MTR_7g011470 25.166 453 296 15 13 439 7 442 1.31e-26 113
MS.gene054337.t1 MTR_8g064880 26.304 441 301 11 15 433 8 446 1.47e-26 113
MS.gene054337.t1 MTR_5g090660 26.594 549 301 25 13 507 2 502 3.07e-26 112
MS.gene054337.t1 MTR_5g464760 25.000 492 316 17 1 460 1 471 3.23e-26 112
MS.gene054337.t1 MTR_6g033675 26.353 425 254 17 17 404 5 407 3.52e-26 112
MS.gene054337.t1 MTR_6g013450 24.619 459 300 17 16 439 10 457 3.57e-26 112
MS.gene054337.t1 MTR_7g070910 24.464 466 295 16 15 438 10 460 6.36e-26 111
MS.gene054337.t1 MTR_5g016660 24.059 478 294 19 8 437 2 458 6.99e-26 111
MS.gene054337.t1 MTR_4g128690 37.113 194 102 6 269 461 265 439 8.85e-26 110
MS.gene054337.t1 MTR_4g064987 24.053 449 290 14 10 437 2 420 9.43e-26 110
MS.gene054337.t1 MTR_3g079480 26.696 457 280 19 16 434 21 460 9.90e-26 110
MS.gene054337.t1 MTR_4g008630 28.968 252 153 7 208 442 200 442 1.15e-25 110
MS.gene054337.t1 MTR_4g064987 24.295 461 280 16 10 437 2 426 1.35e-25 110
MS.gene054337.t1 MTR_7g070810 24.678 466 293 18 12 438 5 451 1.41e-25 110
MS.gene054337.t1 MTR_4g485590 26.396 394 245 11 16 393 9 373 1.42e-25 109
MS.gene054337.t1 MTR_8g090095 35.233 193 108 6 269 445 272 463 1.73e-25 110
MS.gene054337.t1 MTR_7g080900 25.219 456 290 19 5 436 1 429 2.11e-25 109
MS.gene054337.t1 MTR_5g040030 23.568 454 301 16 5 422 3 446 2.60e-25 109
MS.gene054337.t1 MTR_7g070740 24.138 464 298 16 15 438 10 459 3.84e-25 108
MS.gene054337.t1 MTR_1g107360 26.068 468 302 14 15 455 8 458 4.58e-25 108
MS.gene054337.t1 MTR_6g014050 26.362 459 291 17 16 439 11 457 4.76e-25 108
MS.gene054337.t1 MTR_8g064870 26.027 438 304 10 15 434 10 445 6.12e-25 108
MS.gene054337.t1 MTR_1g107380 30.180 222 144 7 223 437 230 447 7.20e-25 108
MS.gene054337.t1 MTR_7g071050 24.161 447 273 13 15 438 12 415 7.25e-25 107
MS.gene054337.t1 MTR_8g007585 24.711 433 243 17 16 439 10 368 8.89e-25 106
MS.gene054337.t1 MTR_7g011470 24.835 455 291 17 13 439 7 438 1.01e-24 107
MS.gene054337.t1 MTR_8g466240 25.000 452 291 14 16 438 8 440 1.06e-24 107
MS.gene054337.t1 MTR_6g033660 35.632 174 105 3 270 437 266 438 1.15e-24 107
MS.gene054337.t1 MTR_1g040310 24.242 462 294 21 15 437 14 458 1.29e-24 107
MS.gene054337.t1 MTR_4g108250 23.992 471 294 17 15 438 10 463 1.29e-24 107
MS.gene054337.t1 MTR_3g069710 24.946 465 278 16 5 437 1 426 1.35e-24 107
MS.gene054337.t1 MTR_8g044140 25.537 419 254 17 45 422 6 407 1.38e-24 107
MS.gene054337.t1 MTR_3g479520 25.702 463 287 20 16 439 15 459 1.60e-24 107
MS.gene054337.t1 MTR_6g035265 23.043 460 300 14 15 439 10 450 1.89e-24 107
MS.gene054337.t1 MTR_3g069690 24.729 461 287 18 13 444 5 434 2.75e-24 106
MS.gene054337.t1 MTR_4g128720 39.264 163 91 4 270 431 269 424 2.83e-24 105
MS.gene054337.t1 MTR_6g013900 25.652 460 296 17 16 441 10 457 3.03e-24 106
MS.gene054337.t1 MTR_6g014310 26.258 457 294 17 16 439 11 457 3.40e-24 106
MS.gene054337.t1 MTR_4g485640 24.685 397 266 11 26 404 219 600 5.46e-24 106
MS.gene054337.t1 MTR_2g035040 31.982 222 126 8 240 439 145 363 5.73e-24 104
MS.gene054337.t1 MTR_1g107365 26.174 447 276 14 15 434 44 463 6.87e-24 105
MS.gene054337.t1 MTR_5g090580 26.585 489 258 19 13 439 2 451 1.63e-23 103
MS.gene054337.t1 MTR_7g013180 24.508 457 308 12 16 455 5 441 2.03e-23 103
MS.gene054337.t1 MTR_3g479470 27.027 407 245 14 16 384 13 405 2.24e-23 103
MS.gene054337.t1 MTR_8g077590 36.264 182 102 4 269 437 261 441 3.04e-23 103
MS.gene054337.t1 MTR_7g012120 32.353 204 116 6 255 439 260 460 3.47e-23 103
MS.gene054337.t1 MTR_6g014200 24.301 465 293 17 16 439 7 453 4.64e-23 102
MS.gene054337.t1 MTR_5g090620 26.957 345 217 10 121 439 117 452 6.40e-23 102
MS.gene054337.t1 MTR_3g479490 23.667 469 295 18 13 439 3 450 6.70e-23 102
MS.gene054337.t1 MTR_6g038200 24.116 481 311 17 5 458 1 454 6.85e-23 102
MS.gene054337.t1 MTR_5g090630 24.946 461 292 15 13 439 2 442 8.77e-23 101
MS.gene054337.t1 MTR_5g027210 27.925 265 156 6 207 444 205 461 1.18e-22 101
MS.gene054337.t1 MTR_8g006260 32.474 194 115 4 270 448 263 455 1.62e-22 100
MS.gene054337.t1 MTR_1g107285 33.043 230 141 8 217 439 217 440 1.82e-22 100
MS.gene054337.t1 MTR_5g098930 25.678 479 268 22 13 439 2 444 2.16e-22 100
MS.gene054337.t1 MTR_2g046750 25.238 420 260 14 15 400 4 403 3.33e-22 100
MS.gene054337.t1 MTR_7g080935 24.520 469 313 16 15 463 10 457 3.53e-22 99.8
MS.gene054337.t1 MTR_1g090280 35.556 180 106 5 290 459 133 312 3.67e-22 97.8
MS.gene054337.t1 MTR_5g039900 23.207 474 312 18 4 439 1 460 4.00e-22 100
MS.gene054337.t1 MTR_6g038220 23.629 474 300 15 16 458 11 453 4.12e-22 99.8
MS.gene054337.t1 MTR_5g058320 34.078 179 105 6 266 439 271 441 4.32e-22 99.8
MS.gene054337.t1 MTR_4g118000 25.397 441 260 15 20 422 16 425 6.15e-22 99.4
MS.gene054337.t1 MTR_5g072860 23.556 450 301 17 16 443 18 446 8.37e-22 99.0
MS.gene054337.t1 MTR_7g070870 25.815 399 261 14 13 391 16 399 1.25e-21 98.2
MS.gene054337.t1 MTR_5g016480 38.583 127 73 2 269 391 274 399 1.48e-21 98.2
MS.gene054337.t1 MTR_7g080950 23.198 444 306 12 15 443 5 428 1.56e-21 97.8
MS.gene054337.t1 MTR_5g072810 22.777 461 313 16 3 446 2 436 1.74e-21 97.8
MS.gene054337.t1 MTR_6g035295 22.979 470 303 16 14 439 10 464 1.84e-21 97.8
MS.gene054337.t1 MTR_2g059240 24.714 437 278 16 16 417 13 433 2.53e-21 97.4
MS.gene054337.t1 MTR_6g014190 32.571 175 109 5 270 441 97 265 3.92e-21 94.4
MS.gene054337.t1 MTR_8g083290 27.195 467 259 20 17 436 5 437 5.31e-21 96.3
MS.gene054337.t1 MTR_6g014150 23.516 455 291 15 13 427 4 441 6.14e-21 96.3
MS.gene054337.t1 MTR_6g013920 24.946 465 293 19 16 441 10 457 7.64e-21 95.9
MS.gene054337.t1 MTR_8g083280 30.493 223 143 7 215 434 220 433 8.05e-21 95.9
MS.gene054337.t1 MTR_2g046820 26.687 326 215 9 93 400 81 400 1.49e-20 94.7
MS.gene054337.t1 MTR_7g470610 31.250 224 130 6 217 426 76 289 1.72e-20 92.4
MS.gene054337.t1 MTR_7g070583 31.250 224 130 6 217 426 76 289 1.72e-20 92.4
MS.gene054337.t1 MTR_3g084540 30.041 243 152 6 217 442 212 453 1.97e-20 94.7
MS.gene054337.t1 MTR_3g031400 22.197 437 295 14 16 437 18 424 2.22e-20 94.4
MS.gene054337.t1 MTR_8g043470 31.395 172 109 4 269 437 187 352 2.66e-20 93.2
MS.gene054337.t1 MTR_8g028755 26.667 270 147 7 165 431 9 230 3.39e-20 90.1
MS.gene054337.t1 MTR_5g090600 34.615 182 103 7 267 439 256 430 5.24e-20 93.2
MS.gene054337.t1 MTR_5g090670 23.625 491 272 19 13 439 2 453 5.64e-20 93.2
MS.gene054337.t1 MTR_5g072830 21.842 467 309 17 16 454 10 448 6.32e-20 92.8
MS.gene054337.t1 MTR_3g009490 32.804 189 96 6 295 457 4 187 1.90e-19 86.7
MS.gene054337.t1 MTR_8g088560 22.573 443 316 11 8 436 2 431 2.76e-19 90.9
MS.gene054337.t1 MTR_8g009840 32.386 176 100 2 285 443 333 506 3.30e-19 91.3
MS.gene054337.t1 MTR_7g013200 23.673 452 304 13 16 448 5 434 4.17e-19 90.1
MS.gene054337.t1 MTR_4g094920 23.651 482 322 14 4 456 17 481 4.79e-19 90.5
MS.gene054337.t1 MTR_5g072820 21.915 470 313 16 16 460 10 450 4.91e-19 90.1
MS.gene054337.t1 MTR_7g080940 23.583 441 294 12 15 436 10 426 5.11e-19 90.1
MS.gene054337.t1 MTR_5g090610 31.579 228 122 9 234 437 218 435 9.07e-19 89.4
MS.gene054337.t1 MTR_3g084520 29.412 238 147 8 217 436 212 446 9.55e-19 89.4
MS.gene054337.t1 MTR_5g090700 30.870 230 125 9 234 439 234 453 1.03e-18 89.4
MS.gene054337.t1 MTR_2g040530 26.578 301 187 8 121 400 115 402 1.11e-18 89.4
MS.gene054337.t1 MTR_0891s0010 28.814 236 146 8 217 439 40 266 1.19e-18 87.0
MS.gene054337.t1 MTR_4g095008 23.031 508 312 18 14 475 9 483 1.48e-18 89.4
MS.gene054337.t1 MTR_5g070040 24.508 457 297 21 13 439 8 446 1.60e-18 88.6
MS.gene054337.t1 MTR_4g082820 30.583 206 129 5 199 392 191 394 5.93e-18 87.0
MS.gene054337.t1 MTR_3g084530 29.389 262 158 11 217 455 212 469 8.31e-18 86.7
MS.gene054337.t1 MTR_5g072840 21.286 451 306 16 16 446 10 431 9.65e-18 86.3
MS.gene054337.t1 MTR_5g004940 35.260 173 102 4 269 432 198 369 1.54e-17 85.1
MS.gene054337.t1 MTR_3g031450 21.670 443 292 15 16 437 18 426 3.09e-17 84.7
MS.gene054337.t1 MTR_0477s0010 30.000 190 123 5 255 439 109 293 3.47e-17 83.2
MS.gene054337.t1 MTR_3g479610 31.313 198 117 8 217 400 63 255 4.07e-17 82.8
MS.gene054337.t1 MTR_5g075440 22.363 474 313 14 16 467 10 450 4.47e-17 84.3
MS.gene054337.t1 MTR_5g031840 23.951 405 269 14 16 393 5 397 7.19e-17 83.6
MS.gene054337.t1 MTR_7g013240 30.818 159 106 3 269 426 251 406 9.89e-17 83.2
MS.gene054337.t1 MTR_7g039550 27.397 219 137 7 223 422 5 220 1.19e-16 80.9
MS.gene054337.t1 MTR_4g082810 29.353 201 134 3 199 392 197 396 2.12e-16 81.6
MS.gene054337.t1 MTR_5g098960 31.527 203 117 10 232 426 225 413 2.79e-16 81.6
MS.gene054337.t1 MTR_6g014240 28.000 175 117 5 266 437 253 421 3.55e-16 81.3
MS.gene054337.t1 MTR_6g014300 22.807 456 301 19 11 437 7 440 7.39e-16 80.5
MS.gene054337.t1 MTR_7g013260 29.560 159 108 3 269 426 252 407 1.28e-15 79.7
MS.gene054337.t1 MTR_5g090690 33.333 159 87 5 240 383 166 320 4.32e-15 77.4
MS.gene054337.t1 MTR_5g031830 23.210 405 274 13 16 393 12 406 5.48e-15 77.8
MS.gene054337.t1 MTR_5g072850 27.835 194 124 6 216 404 160 342 6.21e-15 77.0
MS.gene054337.t1 MTR_5g031860 33.600 125 81 2 270 393 282 405 1.19e-14 76.6
MS.gene054337.t1 MTR_7g013220 22.096 439 288 13 16 426 5 417 2.08e-14 75.9
MS.gene054337.t1 MTR_5g070090 27.273 231 148 11 217 437 216 436 7.59e-14 74.3
MS.gene054337.t1 MTR_7g070760 26.904 197 110 6 217 404 34 205 2.23e-13 69.7
MS.gene054337.t1 MTR_4g079280 27.111 225 120 6 19 241 1 183 3.21e-13 68.6
MS.gene054337.t1 MTR_6g013680 24.706 255 130 8 189 437 153 351 3.74e-13 71.6
MS.gene054337.t1 MTR_6g014185 25.403 248 139 9 206 445 117 326 5.30e-13 70.9
MS.gene054337.t1 MTR_4g114260 49.275 69 34 1 88 156 1 68 9.20e-13 63.9
MS.gene054337.t1 MTR_1g061740 49.275 69 34 1 88 156 1 68 9.20e-13 63.9
MS.gene054337.t1 MTR_2086s0010 28.571 154 100 5 290 439 1 148 9.38e-13 67.0
MS.gene054337.t1 MTR_1996s0010 28.571 154 100 5 290 439 1 148 9.38e-13 67.0
MS.gene054337.t1 MTR_6g014160 25.540 278 164 10 155 425 155 396 1.98e-12 69.3
MS.gene054337.t1 MTR_6g078320 25.121 207 137 5 205 398 215 416 1.75e-11 67.0
MS.gene054337.t1 MTR_0536s0030 34.375 128 72 4 323 438 200 327 1.84e-11 66.2
MS.gene054337.t1 MTR_8g056740 25.701 214 146 5 223 429 121 328 6.19e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054337.t1 AT2G22590 41.949 472 254 8 1 458 1 466 6.08e-127 379
MS.gene054337.t1 AT5G65550 40.564 461 252 10 15 460 8 461 2.87e-117 354
MS.gene054337.t1 AT5G49690 39.035 456 257 6 15 460 9 453 2.39e-107 328
MS.gene054337.t1 AT4G27570 32.604 457 280 14 15 460 6 445 1.15e-61 209
MS.gene054337.t1 AT5G53990 32.415 472 272 15 13 466 3 445 3.16e-60 205
MS.gene054337.t1 AT4G27560 32.166 457 282 14 15 460 6 445 3.23e-60 206
MS.gene054337.t1 AT3G29630 32.755 461 272 14 15 460 5 442 6.57e-60 204
MS.gene054337.t1 AT4G09500 31.729 457 277 13 15 459 5 438 1.30e-59 204
MS.gene054337.t1 AT2G22930 30.786 458 284 12 14 460 4 439 1.76e-59 203
MS.gene054337.t1 AT1G64910 31.169 462 279 15 13 460 3 439 5.44e-58 199
MS.gene054337.t1 AT1G64920 30.277 469 278 12 13 460 3 443 3.22e-55 192
MS.gene054337.t1 AT5G54010 31.020 461 281 16 15 459 5 444 3.85e-55 192
MS.gene054337.t1 AT3G29630 30.937 459 257 13 15 460 5 416 3.60e-54 189
MS.gene054337.t1 AT4G09500 30.416 457 258 16 15 459 5 413 4.24e-50 177
MS.gene054337.t1 AT1G50580 31.140 456 282 17 15 459 5 439 8.55e-50 177
MS.gene054337.t1 AT5G54060 30.407 467 297 13 5 454 3 458 2.05e-48 174
MS.gene054337.t1 AT5G12890 29.424 469 274 17 13 441 7 458 6.55e-39 149
MS.gene054337.t1 AT4G34131 27.292 469 289 16 13 443 7 461 2.35e-38 147
MS.gene054337.t1 AT4G34135 26.906 446 280 15 13 423 8 442 4.14e-37 143
MS.gene054337.t1 AT3G53150 27.565 497 307 14 13 468 19 503 1.07e-36 143
MS.gene054337.t1 AT2G16890 29.158 463 269 21 16 443 9 447 3.15e-36 141
MS.gene054337.t1 AT2G36760 26.531 441 281 16 15 427 13 438 1.69e-35 139
MS.gene054337.t1 AT2G36780 29.821 446 262 19 14 427 12 438 4.93e-35 137
MS.gene054337.t1 AT3G50740 26.580 459 282 17 16 437 7 447 8.93e-35 137
MS.gene054337.t1 AT4G34138 26.767 467 287 16 15 443 10 459 1.21e-34 136
MS.gene054337.t1 AT2G15480 25.000 468 307 13 10 443 4 461 1.58e-34 136
MS.gene054337.t1 AT2G15490 25.216 464 309 12 11 443 2 458 2.04e-34 135
MS.gene054337.t1 AT2G15490 25.054 467 309 12 11 443 2 461 9.27e-34 134
MS.gene054337.t1 AT4G01070 28.172 465 273 15 10 437 2 442 5.28e-33 132
MS.gene054337.t1 AT2G15480 24.686 478 306 14 10 443 4 471 9.36e-33 131
MS.gene054337.t1 AT1G10400 27.119 472 302 20 13 460 4 457 2.16e-32 130
MS.gene054337.t1 AT2G16890 29.425 435 248 21 16 415 9 419 2.50e-32 129
MS.gene054337.t1 AT2G36770 26.577 444 277 16 15 427 13 438 3.82e-32 129
MS.gene054337.t1 AT1G05680 25.527 474 291 18 16 454 6 452 2.25e-31 127
MS.gene054337.t1 AT2G36800 26.077 441 284 16 15 427 11 437 2.46e-31 127
MS.gene054337.t1 AT3G53160 25.793 473 301 18 15 451 7 465 2.67e-31 127
MS.gene054337.t1 AT1G05675 25.581 473 292 17 16 454 6 452 2.75e-31 126
MS.gene054337.t1 AT2G36750 26.116 448 273 16 15 427 9 433 3.26e-31 127
MS.gene054337.t1 AT2G18570 28.540 459 269 17 16 437 5 441 5.03e-31 126
MS.gene054337.t1 AT1G51210 27.650 434 283 14 16 438 20 433 1.11e-30 124
MS.gene054337.t1 AT2G29730 23.913 460 299 15 13 441 2 441 2.16e-30 124
MS.gene054337.t1 AT5G14860 26.623 462 289 16 14 440 6 452 1.02e-29 122
MS.gene054337.t1 AT5G66690 25.551 454 286 14 16 437 7 440 1.62e-29 122
MS.gene054337.t1 AT5G59590 24.550 444 300 12 8 437 2 424 2.82e-29 120
MS.gene054337.t1 AT2G28080 24.947 469 303 15 20 458 22 471 1.03e-28 119
MS.gene054337.t1 AT2G36790 26.490 453 266 15 15 427 12 437 1.93e-28 119
MS.gene054337.t1 AT4G36770 26.681 461 279 15 15 439 3 440 2.15e-28 118
MS.gene054337.t1 AT5G26310 25.771 454 285 15 16 437 7 440 2.24e-28 118
MS.gene054337.t1 AT3G46650 24.512 461 295 17 16 458 10 435 3.31e-28 117
MS.gene054337.t1 AT4G15480 27.293 458 301 15 1 434 1 450 4.38e-28 117
MS.gene054337.t1 AT1G07250 27.160 486 298 20 13 458 3 472 1.50e-27 116
MS.gene054337.t1 AT2G36970 22.645 499 310 15 8 466 2 464 2.33e-27 115
MS.gene054337.t1 AT3G46670 25.431 464 304 15 16 458 9 451 3.05e-27 114
MS.gene054337.t1 AT2G23260 27.803 446 277 16 16 440 10 431 4.47e-27 114
MS.gene054337.t1 AT5G05880 25.910 467 302 19 10 455 2 445 4.80e-27 114
MS.gene054337.t1 AT1G73880 26.637 443 255 18 5 406 3 416 5.59e-27 114
MS.gene054337.t1 AT1G01420 33.649 211 121 4 242 437 235 441 6.99e-27 114
MS.gene054337.t1 AT1G22360 24.625 467 302 16 16 447 10 461 7.19e-27 114
MS.gene054337.t1 AT2G18560 34.016 244 133 6 214 437 116 351 7.94e-27 112
MS.gene054337.t1 AT1G01420 33.649 211 121 4 242 437 238 444 8.03e-27 114
MS.gene054337.t1 AT3G46680 24.301 465 307 13 16 467 9 441 8.19e-27 113
MS.gene054337.t1 AT3G16520 27.536 345 198 14 122 438 121 441 9.64e-27 113
MS.gene054337.t1 AT3G16520 27.536 345 198 14 122 438 121 441 9.95e-27 113
MS.gene054337.t1 AT4G15490 26.049 453 287 14 13 435 5 439 1.03e-26 113
MS.gene054337.t1 AT3G16520 27.536 345 198 14 122 438 121 441 1.04e-26 113
MS.gene054337.t1 AT2G23250 25.858 437 291 12 19 443 1 416 1.07e-26 113
MS.gene054337.t1 AT5G03490 25.383 457 290 15 6 444 9 432 2.04e-26 112
MS.gene054337.t1 AT5G17050 33.846 195 119 4 270 460 270 458 2.72e-26 112
MS.gene054337.t1 AT5G59580 24.138 464 308 15 16 459 9 448 4.50e-26 111
MS.gene054337.t1 AT2G31790 25.000 476 305 17 12 458 4 456 4.77e-26 111
MS.gene054337.t1 AT5G38010 24.385 447 281 13 8 427 2 418 5.97e-26 110
MS.gene054337.t1 AT2G29710 25.164 457 297 19 13 441 2 441 9.53e-26 110
MS.gene054337.t1 AT1G22340 24.536 485 307 17 11 454 8 474 1.58e-25 110
MS.gene054337.t1 AT1G22400 25.514 486 285 21 11 447 8 465 1.68e-25 110
MS.gene054337.t1 AT2G31750 28.947 266 163 10 213 459 201 459 2.42e-25 109
MS.gene054337.t1 AT2G31750 30.638 235 147 8 213 437 201 429 2.98e-25 108
MS.gene054337.t1 AT3G02100 24.619 459 300 15 6 441 3 438 5.60e-25 108
MS.gene054337.t1 AT1G22380 25.926 459 284 19 16 436 13 453 5.65e-25 108
MS.gene054337.t1 AT2G30150 25.117 426 267 14 16 426 13 401 7.16e-25 107
MS.gene054337.t1 AT3G46700 24.771 436 277 16 16 431 9 413 7.50e-25 107
MS.gene054337.t1 AT4G15550 24.838 463 298 17 4 434 1 445 1.25e-24 107
MS.gene054337.t1 AT2G43840 25.446 448 269 18 16 434 7 418 1.35e-24 107
MS.gene054337.t1 AT2G43840 25.446 448 269 18 16 434 7 418 1.87e-24 106
MS.gene054337.t1 AT1G78270 24.236 458 293 15 16 436 13 453 1.87e-24 107
MS.gene054337.t1 AT5G05900 24.222 450 286 18 10 435 2 420 2.29e-24 106
MS.gene054337.t1 AT1G30530 34.524 168 104 3 270 437 264 425 2.89e-24 105
MS.gene054337.t1 AT3G46690 24.091 440 292 12 16 437 9 424 3.35e-24 105
MS.gene054337.t1 AT1G06000 25.346 434 251 15 11 418 5 391 5.20e-24 105
MS.gene054337.t1 AT4G15500 25.714 455 275 14 16 435 9 435 6.37e-24 105
MS.gene054337.t1 AT4G15280 24.672 458 302 14 15 439 3 450 1.93e-23 103
MS.gene054337.t1 AT2G30140 23.431 478 313 17 7 460 4 452 2.89e-23 103
MS.gene054337.t1 AT4G15280 25.054 459 299 15 15 439 35 482 2.95e-23 103
MS.gene054337.t1 AT2G30140 23.517 472 321 17 7 460 4 453 3.67e-23 102
MS.gene054337.t1 AT1G22360 24.601 439 281 16 16 419 10 433 5.10e-23 102
MS.gene054337.t1 AT5G05870 26.211 454 267 20 16 435 8 427 5.24e-23 102
MS.gene054337.t1 AT2G30150 24.645 422 266 14 20 426 1 385 7.10e-23 101
MS.gene054337.t1 AT4G14090 24.330 485 310 18 1 466 1 447 1.03e-22 101
MS.gene054337.t1 AT1G01390 25.105 478 267 11 16 441 8 446 1.15e-22 101
MS.gene054337.t1 AT1G01390 25.105 478 267 11 16 441 25 463 1.32e-22 101
MS.gene054337.t1 AT3G46660 25.536 466 301 16 17 458 15 458 1.67e-22 100
MS.gene054337.t1 AT1G22370 25.783 415 268 16 16 400 13 417 2.10e-22 100
MS.gene054337.t1 AT3G21790 31.967 244 139 7 217 439 218 455 2.71e-22 100
MS.gene054337.t1 AT5G05890 24.009 454 299 17 10 441 2 431 1.38e-21 98.2
MS.gene054337.t1 AT5G17030 30.102 196 126 4 242 437 246 430 1.56e-21 97.8
MS.gene054337.t1 AT3G11340 23.678 435 301 14 17 441 10 423 1.85e-21 97.4
MS.gene054337.t1 AT3G46720 24.654 434 294 13 10 434 3 412 2.02e-21 97.4
MS.gene054337.t1 AT1G24100 24.416 471 305 15 16 458 11 458 2.20e-21 97.4
MS.gene054337.t1 AT5G05860 25.551 454 274 20 10 435 3 420 2.75e-21 97.1
MS.gene054337.t1 AT1G05530 24.736 473 280 17 16 445 5 444 4.18e-21 96.7
MS.gene054337.t1 AT5G38040 23.579 475 280 17 24 458 18 449 6.50e-21 95.9
MS.gene054337.t1 AT5G17040 29.146 199 129 4 262 460 245 431 1.27e-20 95.1
MS.gene054337.t1 AT1G07240 36.207 174 100 5 264 432 268 435 1.38e-20 95.1
MS.gene054337.t1 AT1G07260 31.878 229 135 9 224 439 228 448 1.38e-20 95.1
MS.gene054337.t1 AT5G17040 29.146 199 129 4 262 460 143 329 1.79e-20 93.2
MS.gene054337.t1 AT2G29750 30.204 245 154 8 227 461 239 476 1.82e-20 94.7
MS.gene054337.t1 AT2G26480 30.472 233 142 7 211 434 196 417 2.00e-20 94.4
MS.gene054337.t1 AT1G05560 24.550 444 289 16 16 436 5 425 2.65e-20 94.4
MS.gene054337.t1 AT1G05560 25.280 447 282 17 16 436 55 475 3.16e-20 94.4
MS.gene054337.t1 AT2G29740 30.544 239 148 9 227 457 239 467 3.81e-20 94.0
MS.gene054337.t1 AT4G34135 24.625 333 212 12 13 317 8 329 1.12e-19 90.9
MS.gene054337.t1 AT3G21560 24.895 474 320 15 16 462 12 476 1.13e-19 92.4
MS.gene054337.t1 AT2G43820 31.361 169 109 5 270 436 257 420 3.19e-19 90.9
MS.gene054337.t1 AT4G15260 29.675 246 142 8 216 439 95 331 1.03e-18 88.2
MS.gene054337.t1 AT3G21800 30.488 246 143 7 216 439 213 452 1.30e-18 89.0
MS.gene054337.t1 AT3G55700 24.726 457 301 18 10 445 2 436 3.19e-18 87.8
MS.gene054337.t1 AT3G21760 29.218 243 148 7 217 439 219 457 6.00e-18 87.0
MS.gene054337.t1 AT2G22930 27.778 234 149 9 14 240 4 224 9.04e-17 81.3
MS.gene054337.t1 AT3G55710 24.411 467 294 17 10 445 2 440 1.32e-16 82.8
MS.gene054337.t1 AT3G21750 28.767 219 126 8 242 437 232 443 2.90e-15 78.6
MS.gene054337.t1 AT2G16890 27.864 323 181 17 16 307 9 310 3.90e-15 77.0
MS.gene054337.t1 AT2G16890 27.864 323 181 17 16 307 9 310 3.90e-15 77.0
MS.gene054337.t1 AT1G22370 32.847 137 84 5 269 400 114 247 4.53e-15 76.6
MS.gene054337.t1 AT3G21780 29.146 199 124 4 217 402 209 403 2.65e-14 75.9
MS.gene054337.t1 AT5G37950 25.279 269 167 8 134 384 99 351 3.15e-14 74.7
MS.gene054337.t1 AT5G37950 25.475 263 168 8 134 384 99 345 8.24e-14 73.2

Find 137 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTAGGTTACCTTTCTTT+TGG 0.176851 6.1:+23818477 MS.gene054337:CDS
AGGTAACCAGTTAGGTTTAA+TGG 0.190987 6.1:-23817837 None:intergenic
AAATGAAAGGTTATGACTTA+TGG 0.208619 6.1:-23819720 None:intergenic
AAGTCATAACCTTTCATTTC+CGG 0.220083 6.1:+23819724 MS.gene054337:CDS
TCTATTGTTTACATTGGATT+TGG 0.227229 6.1:+23818398 MS.gene054337:CDS
CTCATGGAATTGAGCTTTCT+AGG 0.248262 6.1:+23818462 MS.gene054337:CDS
GATGAATGGTTGAAGTGTTT+TGG 0.279334 6.1:-23817748 None:intergenic
GACAACCTTTCCCATTTCTT+TGG 0.284100 6.1:-23818867 None:intergenic
CTATTGTTTACATTGGATTT+GGG 0.294596 6.1:+23818399 MS.gene054337:CDS
CAAAAGAACGCGGAATTGTT+TGG 0.299446 6.1:+23818558 MS.gene054337:CDS
TATTACCAACCTCAATGTTT+TGG 0.301536 6.1:-23818810 None:intergenic
AAACATTGGTCTAGTAAATA+AGG 0.303786 6.1:-23818701 None:intergenic
GTTCGTTCCTCGAATCCTTT+AGG 0.315143 6.1:-23818536 None:intergenic
AATGAAAGGTTATGACTTAT+GGG 0.319344 6.1:-23819719 None:intergenic
AATGTTCCATTAAACCTAAC+TGG 0.336194 6.1:+23817831 MS.gene054337:CDS
CTAACTTAAGGTAACCAGTT+AGG 0.345808 6.1:-23817845 None:intergenic
TCAGCTATGAAGAATGATTC+TGG 0.347322 6.1:+23818137 MS.gene054337:CDS
CAGGAACAATGCCAAAGAAA+TGG 0.350191 6.1:+23818856 MS.gene054337:CDS
GCCAAGATTCTTGCTCAAAA+TGG 0.354651 6.1:+23817669 MS.gene054337:CDS
GTTATGACTTATGGGTTTGT+AGG 0.356084 6.1:-23819711 None:intergenic
ATCTTAACTCATGGATCAAT+TGG 0.359511 6.1:+23818605 MS.gene054337:CDS
TAGAGGTTCTGAAAAGAAAA+AGG 0.368077 6.1:-23818208 None:intergenic
CCTTGTAGTTCTTCTATGTA+TGG 0.374866 6.1:-23817792 None:intergenic
AACATTGAGGTTGGTAATAG+TGG 0.376551 6.1:+23818814 MS.gene054337:CDS
GCGGAATTGTTTGGAAAACT+TGG 0.382355 6.1:+23818567 MS.gene054337:CDS
ATAGGGCAAGCTTGGAGCTT+GGG 0.383665 6.1:+23818002 MS.gene054337:CDS
CTGTCGGTTCGTTCCCTTGG+TGG 0.385914 6.1:-23818035 None:intergenic
CATGAGTTAAGATCTTAAAC+TGG 0.387177 6.1:-23818595 None:intergenic
GTTTGAGATGAATGGTTGTT+TGG 0.389311 6.1:-23818091 None:intergenic
CAAAACTTCAAAGCCTGATT+GGG 0.395265 6.1:+23817905 MS.gene054337:CDS
TCAAAACTTCAAAGCCTGAT+TGG 0.396669 6.1:+23817904 MS.gene054337:CDS
TCTCTGTCGGTTCGTTCCCT+TGG 0.399007 6.1:-23818038 None:intergenic
ATACAAGGTTCCAGTGGTTC+CGG 0.405611 6.1:+23818271 MS.gene054337:CDS
TACCTTAAGTTAGCTTATGA+TGG 0.408451 6.1:+23817855 MS.gene054337:CDS
AACCATCATAAGCTAACTTA+AGG 0.410038 6.1:-23817857 None:intergenic
GCCCCATCTGGCTCACTCCT+TGG 0.433394 6.1:-23818767 None:intergenic
CTCGTAACGTTTGAGATGAA+TGG 0.433785 6.1:-23818099 None:intergenic
CAAGTCTCTTCATGTTGTAA+TGG 0.438409 6.1:+23817602 MS.gene054337:CDS
ATGAGGAAGGAAGTATTTAC+AGG 0.441472 6.1:+23818837 MS.gene054337:CDS
AGCATCTCAATGACTGAACT+TGG 0.451628 6.1:-23818650 None:intergenic
AGGAACAATGCCAAAGAAAT+GGG 0.454855 6.1:+23818857 MS.gene054337:CDS
CATAGGGCAAGCTTGGAGCT+TGG 0.456409 6.1:+23818001 MS.gene054337:CDS
GCCGAAGTCGGCGGTGAAGA+TGG 0.457738 6.1:-23819788 None:intergenic
TCCCTAGTGATAGCCCCATC+TGG 0.459222 6.1:-23818779 None:intergenic
AGCCAGATGGGGCTATCACT+AGG 0.467286 6.1:+23818777 MS.gene054337:CDS
GTATCTCGGTAACATGGTCT+TGG 0.467758 6.1:-23817881 None:intergenic
ATTATTAACAATTGAAGCCA+TGG 0.471650 6.1:-23817565 None:intergenic
TCATCTTCTATTGTTTACAT+TGG 0.472355 6.1:+23818392 MS.gene054337:CDS
CTCAATTCCATGAGCTAACT+CGG 0.476428 6.1:-23818453 None:intergenic
GAAGATGGAGGTGACGCGGC+TGG 0.476756 6.1:-23819773 None:intergenic
AGCAACCCGACCGGAACCAC+TGG 0.477995 6.1:-23818281 None:intergenic
ATTACAGCATAGGGCAAGCT+TGG 0.481084 6.1:+23817994 MS.gene054337:CDS
AATACTTGCATATAGTTTGT+CGG 0.484012 6.1:-23818183 None:intergenic
AGGTTCCAGTGGTTCCGGTC+GGG 0.484391 6.1:+23818276 MS.gene054337:CDS
GAGGTTGGTAATAGTGGATG+AGG 0.488112 6.1:+23818820 MS.gene054337:CDS
TCCATCTTCACCGCCGACTT+CGG 0.489714 6.1:+23819787 MS.gene054337:CDS
GAACCACTGGAACCTTGTAT+TGG 0.491686 6.1:-23818268 None:intergenic
CGGAATTGTTTGGAAAACTT+GGG 0.492448 6.1:+23818568 MS.gene054337:CDS
AAGATGAAAAGAATCATGAC+TGG 0.497222 6.1:+23818336 MS.gene054337:CDS
AGGTCGCGTAACAGAGGAAA+AGG 0.498543 6.1:-23819691 None:intergenic
AATGGTCCCATGGCTAGCTA+TGG 0.500203 6.1:+23817620 MS.gene054337:CDS
ACAAGGAATGTTGAAACTCT+TGG 0.501135 6.1:-23817967 None:intergenic
TACCAAGGAGTGAGCCAGAT+GGG 0.501584 6.1:+23818765 MS.gene054337:CDS
CCTTGTGCGTATTACAGCAT+AGG 0.505721 6.1:+23817984 MS.gene054337:CDS
CTAGAGAACTTGAAGGTGAA+TGG 0.505793 6.1:+23818228 MS.gene054337:CDS
TCGTCATCTCTTATCTGCAT+AGG 0.507800 6.1:-23818311 None:intergenic
ACAGAGGAAGCGTTAAAGTC+TGG 0.509241 6.1:-23819626 None:intergenic
ACATCACAGAAAACCCAATC+AGG 0.510823 6.1:-23817918 None:intergenic
TGGAAAGGAACCCACTTTGG+TGG 0.511359 6.1:-23818071 None:intergenic
CTTGTGCGTATTACAGCATA+GGG 0.513381 6.1:+23817985 MS.gene054337:CDS
TCTGTGATGTGGTATCAGAT+TGG 0.519826 6.1:+23817931 MS.gene054337:CDS
GGTACACTTGAATTACCTAA+AGG 0.524004 6.1:+23818521 MS.gene054337:CDS
TTAACTCATGGATCAATTGG+TGG 0.524361 6.1:+23818608 MS.gene054337:CDS
GTTTGGAAAGGAACCCACTT+TGG 0.524386 6.1:-23818074 None:intergenic
GGTGAAAATCAAGGAATGGT+TGG 0.525226 6.1:+23818358 MS.gene054337:CDS
TTCATGTTGTAATGGTCCCA+TGG 0.527374 6.1:+23817610 MS.gene054337:CDS
TGAATTACCTAAAGGATTCG+AGG 0.527492 6.1:+23818529 MS.gene054337:CDS
TCATGACTGGGTGAAAATCA+AGG 0.527664 6.1:+23818349 MS.gene054337:CDS
ACTTCAACCATTCATCAAGT+TGG 0.529133 6.1:+23817755 MS.gene054337:CDS
CAGTTTAAGATCTTAACTCA+TGG 0.529456 6.1:+23818596 MS.gene054337:CDS
AATCGGCCGCCGGAAATGAA+AGG 0.532728 6.1:-23819733 None:intergenic
AGTTCTTCTATGTATGGTAA+AGG 0.536100 6.1:-23817786 None:intergenic
TTGGTAATAGTGGATGAGGA+AGG 0.536451 6.1:+23818824 MS.gene054337:CDS
ATACTCTTGCAAACAAACAT+TGG 0.536762 6.1:-23818715 None:intergenic
AGTATTAGAAGAAAAGAAAG+TGG 0.537242 6.1:+23818733 MS.gene054337:CDS
TCTCTTATCTGCATAGGTGG+TGG 0.540244 6.1:-23818305 None:intergenic
TTATATTTCTGACCAATACA+AGG 0.540863 6.1:+23818256 MS.gene054337:CDS
CTTGTATAGCCCACCAAAGT+GGG 0.542786 6.1:+23818061 MS.gene054337:CDS
TCTTTCAAAGCCCAAAAGAA+AGG 0.546449 6.1:-23818488 None:intergenic
AGATGAATGGTTGTTTGGAA+AGG 0.550390 6.1:-23818086 None:intergenic
GGAAAGGAACCCACTTTGGT+GGG 0.550485 6.1:-23818070 None:intergenic
GGCTTTGAAAGATCTTAAAG+AGG 0.553468 6.1:+23818499 MS.gene054337:CDS
AGAACCTCTAGAGAACTTGA+AGG 0.555029 6.1:+23818221 MS.gene054337:CDS
AAGGTTCCAGTGGTTCCGGT+CGG 0.555756 6.1:+23818275 MS.gene054337:CDS
GATATAACCGAGTTAGCTCA+TGG 0.558850 6.1:+23818446 MS.gene054337:CDS
AATGAGTGACAACTGACAAT+CGG 0.561261 6.1:-23819750 None:intergenic
CGATCCAACTAAAAGAGAGA+AGG 0.562121 6.1:-23819815 None:intergenic
TTATTAACAATTGAAGCCAT+GGG 0.566540 6.1:-23817564 None:intergenic
ATGGTCCCATGGCTAGCTAT+GGG 0.569152 6.1:+23817621 MS.gene054337:CDS
GGGAAAGGTTGTCAGTTCAA+AGG 0.572302 6.1:+23818877 MS.gene054337:CDS
TTCACCTTCAAGTTCTCTAG+AGG 0.574211 6.1:-23818225 None:intergenic
ATGTGTCCCATAGCTAGCCA+TGG 0.577673 6.1:-23817627 None:intergenic
TGTTGCCAAAACATTGAGGT+TGG 0.582806 6.1:+23818805 MS.gene054337:CDS
GACAACTGACAATCGGCCGC+CGG 0.587666 6.1:-23819743 None:intergenic
ACTCTGTTGCCAAAACATTG+AGG 0.588124 6.1:+23818801 MS.gene054337:CDS
AGAAAAGAAAGTGGCTGTTG+AGG 0.589309 6.1:+23818742 MS.gene054337:CDS
AGAGAAGGGAGTGCCGAAGT+CGG 0.589786 6.1:-23819800 None:intergenic
GCCAGATGGGGCTATCACTA+GGG 0.598419 6.1:+23818778 MS.gene054337:CDS
GGGTTTCTTTAATCCACCAA+GGG 0.599138 6.1:+23818022 MS.gene054337:CDS
ATGAGTTAAGATCTTAAACT+GGG 0.610830 6.1:-23818594 None:intergenic
GCTTTGAAAGATCTTAAAGA+GGG 0.611607 6.1:+23818500 MS.gene054337:CDS
GGTGGTGGAAGCAACCCGAC+CGG 0.612956 6.1:-23818290 None:intergenic
GAAGGGAGTGCCGAAGTCGG+CGG 0.615014 6.1:-23819797 None:intergenic
TTGAAACTCTTGGCTATCGA+CGG 0.616830 6.1:-23817957 None:intergenic
TGTGTCCCATAGCTAGCCAT+GGG 0.617525 6.1:-23817626 None:intergenic
GATCCAACTAAAAGAGAGAA+GGG 0.619975 6.1:-23819814 None:intergenic
GAGGAAGCGTTAAAGTCTGG+TGG 0.622690 6.1:-23819623 None:intergenic
ACTTGTATAGCCCACCAAAG+TGG 0.625022 6.1:+23818060 MS.gene054337:CDS
AAGTGGCTGTTGAGGTACCA+AGG 0.625935 6.1:+23818750 MS.gene054337:CDS
TGGGCTATACAAGTCTCTGT+CGG 0.627710 6.1:-23818051 None:intergenic
TCATCTCTTATCTGCATAGG+TGG 0.628699 6.1:-23818308 None:intergenic
TGGGTTTCTTTAATCCACCA+AGG 0.631561 6.1:+23818021 MS.gene054337:CDS
CAATGCCAAAGAAATGGGAA+AGG 0.631704 6.1:+23818862 MS.gene054337:CDS
CGGTGAAGATGGAGGTGACG+CGG 0.632901 6.1:-23819777 None:intergenic
TGACCAATACAAGGTTCCAG+TGG 0.637627 6.1:+23818265 MS.gene054337:CDS
AGATGAAAAGAATCATGACT+GGG 0.639137 6.1:+23818337 MS.gene054337:CDS
GTACCAAGGAGTGAGCCAGA+TGG 0.642683 6.1:+23818764 MS.gene054337:CDS
GGTGGTTGTATGACTCATTG+TGG 0.643696 6.1:+23818626 MS.gene054337:CDS
CCTATGCTGTAATACGCACA+AGG 0.645135 6.1:-23817984 None:intergenic
CCATACATAGAAGAACTACA+AGG 0.646424 6.1:+23817792 MS.gene054337:CDS
TCATAACCTTTCATTTCCGG+CGG 0.647233 6.1:+23819727 MS.gene054337:CDS
GTTTGTAGGTCGCGTAACAG+AGG 0.647618 6.1:-23819697 None:intergenic
ACCAAGGAGTGAGCCAGATG+GGG 0.649556 6.1:+23818766 MS.gene054337:CDS
ACTGGGTGAAAATCAAGGAA+TGG 0.661292 6.1:+23818354 MS.gene054337:CDS
GAAGTCGGCGGTGAAGATGG+AGG 0.663772 6.1:-23819785 None:intergenic
TGAGTTAAGATCTTAAACTG+GGG 0.692657 6.1:-23818593 None:intergenic
GAGGAACGAACAAAAGAACG+CGG 0.779735 6.1:+23818548 MS.gene054337:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATATTTTTTTTAT+AGG + chr6.1:23819554-23819573 MS.gene054337:intron 0.0%
!!! AAAAATATATTTTTTTTATA+GGG + chr6.1:23819555-23819574 MS.gene054337:intron 0.0%
!!! ATAAAAAAAATATATTTTTT+GGG - chr6.1:23819554-23819573 None:intergenic 0.0%
!!! TATAAAAAAAATATATTTTT+TGG - chr6.1:23819555-23819574 None:intergenic 0.0%
!! AGAAAAATAAAATATGATAA+GGG - chr6.1:23819595-23819614 None:intergenic 10.0%
!! GATAAAAAAAAAAAATTGAA+AGG - chr6.1:23819145-23819164 None:intergenic 10.0%
!!! AAAAAAAATATATTTTTTGG+GGG - chr6.1:23819552-23819571 None:intergenic 10.0%
!! GAGAAAAATAAAATATGATA+AGG - chr6.1:23819596-23819615 None:intergenic 15.0%
!! TTTGAACTTTCAAAAATAAT+GGG - chr6.1:23819305-23819324 None:intergenic 15.0%
!!! AAAAAAATATATTTTTTGGG+GGG - chr6.1:23819551-23819570 None:intergenic 15.0%
!!! TATGTATTTAGTTCAAATTT+TGG + chr6.1:23819366-23819385 MS.gene054337:intron 15.0%
!!! TTTTGAACTTTCAAAAATAA+TGG - chr6.1:23819306-23819325 None:intergenic 15.0%
!! ATATTCCATATAATTCTTTG+TGG + chr6.1:23819453-23819472 MS.gene054337:intron 20.0%
!!! CATATTTTATTTTTCTCAAG+TGG + chr6.1:23819599-23819618 MS.gene054337:intron 20.0%
! AAATGAAAGGTTATGACTTA+TGG - chr6.1:23819723-23819742 None:intergenic 25.0%
! AATGAAAGGTTATGACTTAT+GGG - chr6.1:23819722-23819741 None:intergenic 25.0%
! AGTATCCACAAAGAATTATA+TGG - chr6.1:23819461-23819480 None:intergenic 25.0%
! AGTATTAGAAGAAAAGAAAG+TGG + chr6.1:23818733-23818752 MS.gene054337:CDS 25.0%
! ATGAGTTAAGATCTTAAACT+GGG - chr6.1:23818597-23818616 None:intergenic 25.0%
! CATATTTCATATACTTCTTC+CGG + chr6.1:23818972-23818991 MS.gene054337:intron 25.0%
! CTATTGTTTACATTGGATTT+GGG + chr6.1:23818399-23818418 MS.gene054337:CDS 25.0%
! TCATCTTCTATTGTTTACAT+TGG + chr6.1:23818392-23818411 MS.gene054337:CDS 25.0%
! TCTATTGTTTACATTGGATT+TGG + chr6.1:23818398-23818417 MS.gene054337:CDS 25.0%
!! AAACATTGGTCTAGTAAATA+AGG - chr6.1:23818704-23818723 None:intergenic 25.0%
!! AATACTTGCATATAGTTTGT+CGG - chr6.1:23818186-23818205 None:intergenic 25.0%
!! ATCTAGTCTTTATTATAGAC+TGG + chr6.1:23819046-23819065 MS.gene054337:intron 25.0%
!! GTTTTACTTATAATAGTGAC+CGG + chr6.1:23819103-23819122 MS.gene054337:intron 25.0%
!! GTTTTGCTTATAATAATGAC+CGG - chr6.1:23818994-23819013 None:intergenic 25.0%
!! TTATATTTCTGACCAATACA+AGG + chr6.1:23818256-23818275 MS.gene054337:CDS 25.0%
!!! CATTTGATCAATGTTTTTAG+GGG - chr6.1:23817718-23817737 None:intergenic 25.0%
!!! GCATTTGATCAATGTTTTTA+GGG - chr6.1:23817719-23817738 None:intergenic 25.0%
AACCATCATAAGCTAACTTA+AGG - chr6.1:23817860-23817879 None:intergenic 30.0%
AAGATGAAAAGAATCATGAC+TGG + chr6.1:23818336-23818355 MS.gene054337:CDS 30.0%
AAGTCATAACCTTTCATTTC+CGG + chr6.1:23819724-23819743 MS.gene054337:CDS 30.0%
AATGTTCCATTAAACCTAAC+TGG + chr6.1:23817831-23817850 MS.gene054337:CDS 30.0%
AGATGAAAAGAATCATGACT+GGG + chr6.1:23818337-23818356 MS.gene054337:CDS 30.0%
AGTTCTTCTATGTATGGTAA+AGG - chr6.1:23817789-23817808 None:intergenic 30.0%
ATACTCTTGCAAACAAACAT+TGG - chr6.1:23818718-23818737 None:intergenic 30.0%
ATCTTAACTCATGGATCAAT+TGG + chr6.1:23818605-23818624 MS.gene054337:CDS 30.0%
CATGAGTTAAGATCTTAAAC+TGG - chr6.1:23818598-23818617 None:intergenic 30.0%
TAACTAGAGCCATGAATTAA+TGG + chr6.1:23819480-23819499 MS.gene054337:intron 30.0%
TGAGTTAAGATCTTAAACTG+GGG - chr6.1:23818596-23818615 None:intergenic 30.0%
! ATGGTAATGATCATGTTACA+AGG - chr6.1:23819263-23819282 None:intergenic 30.0%
! CAGTTTAAGATCTTAACTCA+TGG + chr6.1:23818596-23818615 MS.gene054337:CDS 30.0%
! GATTTTACCAACTTGATGAA+TGG - chr6.1:23817765-23817784 None:intergenic 30.0%
! GGCATTTGATCAATGTTTTT+AGG - chr6.1:23817720-23817739 None:intergenic 30.0%
! TACCTTAAGTTAGCTTATGA+TGG + chr6.1:23817855-23817874 MS.gene054337:CDS 30.0%
! TATTACCAACCTCAATGTTT+TGG - chr6.1:23818813-23818832 None:intergenic 30.0%
! TGGTAATGATCATGTTACAA+GGG - chr6.1:23819262-23819281 None:intergenic 30.0%
! TTCTAGGTTACCTTTCTTTT+GGG + chr6.1:23818478-23818497 MS.gene054337:CDS 30.0%
! TTTCTAGGTTACCTTTCTTT+TGG + chr6.1:23818477-23818496 MS.gene054337:CDS 30.0%
!! AACTCTAAACTTTTGAAGAG+TGG - chr6.1:23818936-23818955 None:intergenic 30.0%
!! ATGAATGGTTGAAGTGTTTT+GGG - chr6.1:23817750-23817769 None:intergenic 30.0%
!! GCTTTGAAAGATCTTAAAGA+GGG + chr6.1:23818500-23818519 MS.gene054337:CDS 30.0%
!! TAGAGGTTCTGAAAAGAAAA+AGG - chr6.1:23818211-23818230 None:intergenic 30.0%
!!! AAAATATATTTTTTGGGGGG+TGG - chr6.1:23819548-23819567 None:intergenic 30.0%
!!! CATACTACCTTTTTTTGAGT+TGG + chr6.1:23817647-23817666 MS.gene054337:CDS 30.0%
!!! CTTTGAAGTTTTGAGTATCT+CGG - chr6.1:23817898-23817917 None:intergenic 30.0%
AATGAGTGACAACTGACAAT+CGG - chr6.1:23819753-23819772 None:intergenic 35.0%
ACAAGGAATGTTGAAACTCT+TGG - chr6.1:23817970-23817989 None:intergenic 35.0%
ACTTCAACCATTCATCAAGT+TGG + chr6.1:23817755-23817774 MS.gene054337:CDS 35.0%
AGATGAATGGTTGTTTGGAA+AGG - chr6.1:23818089-23818108 None:intergenic 35.0%
AGGAACAATGCCAAAGAAAT+GGG + chr6.1:23818857-23818876 MS.gene054337:CDS 35.0%
AGGTAACCAGTTAGGTTTAA+TGG - chr6.1:23817840-23817859 None:intergenic 35.0%
ATCTTGGCCAACTCAAAAAA+AGG - chr6.1:23817657-23817676 None:intergenic 35.0%
CAAAACTTCAAAGCCTGATT+GGG + chr6.1:23817905-23817924 MS.gene054337:CDS 35.0%
CAAGTCTCTTCATGTTGTAA+TGG + chr6.1:23817602-23817621 MS.gene054337:CDS 35.0%
CCATACATAGAAGAACTACA+AGG + chr6.1:23817792-23817811 MS.gene054337:CDS 35.0%
CCTTGTAGTTCTTCTATGTA+TGG - chr6.1:23817795-23817814 None:intergenic 35.0%
CGGAATTGTTTGGAAAACTT+GGG + chr6.1:23818568-23818587 MS.gene054337:CDS 35.0%
CTAACTTAAGGTAACCAGTT+AGG - chr6.1:23817848-23817867 None:intergenic 35.0%
GGTACACTTGAATTACCTAA+AGG + chr6.1:23818521-23818540 MS.gene054337:CDS 35.0%
GTACTTCTTCCATCCTTAAT+TGG - chr6.1:23819402-23819421 None:intergenic 35.0%
GTTATGACTTATGGGTTTGT+AGG - chr6.1:23819714-23819733 None:intergenic 35.0%
TCAAAACTTCAAAGCCTGAT+TGG + chr6.1:23817904-23817923 MS.gene054337:CDS 35.0%
TCAAACACACCAATTAAGGA+TGG + chr6.1:23819390-23819409 MS.gene054337:intron 35.0%
TCAGCTATGAAGAATGATTC+TGG + chr6.1:23818137-23818156 MS.gene054337:CDS 35.0%
TCTTTCAAAGCCCAAAAGAA+AGG - chr6.1:23818491-23818510 None:intergenic 35.0%
TGAATTACCTAAAGGATTCG+AGG + chr6.1:23818529-23818548 MS.gene054337:CDS 35.0%
TGGATCAAACACACCAATTA+AGG + chr6.1:23819386-23819405 MS.gene054337:intron 35.0%
TTAACTCATGGATCAATTGG+TGG + chr6.1:23818608-23818627 MS.gene054337:CDS 35.0%
TTACTTATAATAGTGACCGG+AGG + chr6.1:23819106-23819125 MS.gene054337:intron 35.0%
! AAGCTTATATGGGCTAAGAT+GGG + chr6.1:23819515-23819534 MS.gene054337:intron 35.0%
! ACCATTTTGAGCAAGAATCT+TGG - chr6.1:23817673-23817692 None:intergenic 35.0%
! GTTTGAGATGAATGGTTGTT+TGG - chr6.1:23818094-23818113 None:intergenic 35.0%
!! AACATTGAGGTTGGTAATAG+TGG + chr6.1:23818814-23818833 MS.gene054337:CDS 35.0%
!! ATGAGGAAGGAAGTATTTAC+AGG + chr6.1:23818837-23818856 MS.gene054337:CDS 35.0%
!! GATGAATGGTTGAAGTGTTT+TGG - chr6.1:23817751-23817770 None:intergenic 35.0%
!! GGCTTTGAAAGATCTTAAAG+AGG + chr6.1:23818499-23818518 MS.gene054337:CDS 35.0%
!! GTTTTTAGGGGAGTTTATGA+AGG - chr6.1:23817706-23817725 None:intergenic 35.0%
!! TGAAGTGTTTTGGGTGTTTT+AGG - chr6.1:23817741-23817760 None:intergenic 35.0%
!! TTTTGAGTATCTCGGTAACA+TGG - chr6.1:23817890-23817909 None:intergenic 35.0%
AACTCTTGTCAATGCACTAC+TGG - chr6.1:23819200-23819219 None:intergenic 40.0%
ACATCACAGAAAACCCAATC+AGG - chr6.1:23817921-23817940 None:intergenic 40.0%
ACTCTGTTGCCAAAACATTG+AGG + chr6.1:23818801-23818820 MS.gene054337:CDS 40.0%
ACTGGGTGAAAATCAAGGAA+TGG + chr6.1:23818354-23818373 MS.gene054337:CDS 40.0%
AGAAAAGAAAGTGGCTGTTG+AGG + chr6.1:23818742-23818761 MS.gene054337:CDS 40.0%
AGCATCTCAATGACTGAACT+TGG - chr6.1:23818653-23818672 None:intergenic 40.0%
AGGGAAACATATACTTCCTC+CGG - chr6.1:23819125-23819144 None:intergenic 40.0%
CAAAAGAACGCGGAATTGTT+TGG + chr6.1:23818558-23818577 MS.gene054337:CDS 40.0%
CAATGCCAAAGAAATGGGAA+AGG + chr6.1:23818862-23818881 MS.gene054337:CDS 40.0%
CAGGAACAATGCCAAAGAAA+TGG + chr6.1:23818856-23818875 MS.gene054337:CDS 40.0%
CTAGAGAACTTGAAGGTGAA+TGG + chr6.1:23818228-23818247 MS.gene054337:CDS 40.0%
CTCAATTCCATGAGCTAACT+CGG - chr6.1:23818456-23818475 None:intergenic 40.0%
CTCATGGAATTGAGCTTTCT+AGG + chr6.1:23818462-23818481 MS.gene054337:CDS 40.0%
CTTGTGCGTATTACAGCATA+GGG + chr6.1:23817985-23818004 MS.gene054337:CDS 40.0%
GACAACCTTTCCCATTTCTT+TGG - chr6.1:23818870-23818889 None:intergenic 40.0%
GATATAACCGAGTTAGCTCA+TGG + chr6.1:23818446-23818465 MS.gene054337:CDS 40.0%
GCCAAGATTCTTGCTCAAAA+TGG + chr6.1:23817669-23817688 MS.gene054337:CDS 40.0%
GCGGAATTGTTTGGAAAACT+TGG + chr6.1:23818567-23818586 MS.gene054337:CDS 40.0%
GGGTTTCTTTAATCCACCAA+GGG + chr6.1:23818022-23818041 MS.gene054337:CDS 40.0%
GGTGAAAATCAAGGAATGGT+TGG + chr6.1:23818358-23818377 MS.gene054337:CDS 40.0%
TCATAACCTTTCATTTCCGG+CGG + chr6.1:23819727-23819746 MS.gene054337:CDS 40.0%
TCATCTCTTATCTGCATAGG+TGG - chr6.1:23818311-23818330 None:intergenic 40.0%
TCATGACTGGGTGAAAATCA+AGG + chr6.1:23818349-23818368 MS.gene054337:CDS 40.0%
TCGTCATCTCTTATCTGCAT+AGG - chr6.1:23818314-23818333 None:intergenic 40.0%
TCTGTGATGTGGTATCAGAT+TGG + chr6.1:23817931-23817950 MS.gene054337:CDS 40.0%
TGGGTTTCTTTAATCCACCA+AGG + chr6.1:23818021-23818040 MS.gene054337:CDS 40.0%
TGTTGCCAAAACATTGAGGT+TGG + chr6.1:23818805-23818824 MS.gene054337:CDS 40.0%
TTCATGTTGTAATGGTCCCA+TGG + chr6.1:23817610-23817629 MS.gene054337:CDS 40.0%
TTGAAACTCTTGGCTATCGA+CGG - chr6.1:23817960-23817979 None:intergenic 40.0%
! AAGGATGGAAGAAGTACGTA+TGG + chr6.1:23819405-23819424 MS.gene054337:intron 40.0%
! AGAACCTCTAGAGAACTTGA+AGG + chr6.1:23818221-23818240 MS.gene054337:CDS 40.0%
! CTCGTAACGTTTGAGATGAA+TGG - chr6.1:23818102-23818121 None:intergenic 40.0%
! GAAGCTTATATGGGCTAAGA+TGG + chr6.1:23819514-23819533 MS.gene054337:intron 40.0%
! GTTTTGTGTACGTGTAACAG+AGG - chr6.1:23819645-23819664 None:intergenic 40.0%
! TGATTGGGTTTTCTGTGATG+TGG + chr6.1:23817920-23817939 MS.gene054337:CDS 40.0%
! TTCACCTTCAAGTTCTCTAG+AGG - chr6.1:23818228-23818247 None:intergenic 40.0%
!! TTGGTAATAGTGGATGAGGA+AGG + chr6.1:23818824-23818843 MS.gene054337:CDS 40.0%
ACTTGTATAGCCCACCAAAG+TGG + chr6.1:23818060-23818079 MS.gene054337:CDS 45.0%
ATACAAGGTTCCAGTGGTTC+CGG + chr6.1:23818271-23818290 MS.gene054337:CDS 45.0%
ATTACAGCATAGGGCAAGCT+TGG + chr6.1:23817994-23818013 MS.gene054337:CDS 45.0%
CCACTGGAGCCATTAATTCA+TGG - chr6.1:23819492-23819511 None:intergenic 45.0%
CCATGAATTAATGGCTCCAG+TGG + chr6.1:23819489-23819508 MS.gene054337:intron 45.0%
CCTATGCTGTAATACGCACA+AGG - chr6.1:23817987-23818006 None:intergenic 45.0%
CCTTGTGCGTATTACAGCAT+AGG + chr6.1:23817984-23818003 MS.gene054337:CDS 45.0%
CTACTGGCATCAACATCACA+TGG - chr6.1:23819184-23819203 None:intergenic 45.0%
CTTGTATAGCCCACCAAAGT+GGG + chr6.1:23818061-23818080 MS.gene054337:CDS 45.0%
GAACCACTGGAACCTTGTAT+TGG - chr6.1:23818271-23818290 None:intergenic 45.0%
GAGGAACGAACAAAAGAACG+CGG + chr6.1:23818548-23818567 MS.gene054337:CDS 45.0%
GGGAAAGGTTGTCAGTTCAA+AGG + chr6.1:23818877-23818896 MS.gene054337:CDS 45.0%
GGTGGTTGTATGACTCATTG+TGG + chr6.1:23818626-23818645 MS.gene054337:CDS 45.0%
GTATCTCGGTAACATGGTCT+TGG - chr6.1:23817884-23817903 None:intergenic 45.0%
GTTCGTTCCTCGAATCCTTT+AGG - chr6.1:23818539-23818558 None:intergenic 45.0%
GTTTGGAAAGGAACCCACTT+TGG - chr6.1:23818077-23818096 None:intergenic 45.0%
TCTCTTATCTGCATAGGTGG+TGG - chr6.1:23818308-23818327 None:intergenic 45.0%
TGAATTAATGGCTCCAGTGG+CGG + chr6.1:23819492-23819511 MS.gene054337:intron 45.0%
TGACCAATACAAGGTTCCAG+TGG + chr6.1:23818265-23818284 MS.gene054337:CDS 45.0%
TGGGCTATACAAGTCTCTGT+CGG - chr6.1:23818054-23818073 None:intergenic 45.0%
!! ACAGAGGAAGCGTTAAAGTC+TGG - chr6.1:23819629-23819648 None:intergenic 45.0%
!! GAGGTTGGTAATAGTGGATG+AGG + chr6.1:23818820-23818839 MS.gene054337:CDS 45.0%
!! ATAAAAAAAAAAAATTGAAA+GGG - chr6.1:23819144-23819163 None:intergenic 5.0%
!!! AAAAAAACATTTTTTATTAA+TGG - chr6.1:23819282-23819301 None:intergenic 5.0%
!!! TAAAAAAAATATATTTTTTG+GGG - chr6.1:23819553-23819572 None:intergenic 5.0%
AGGTCGCGTAACAGAGGAAA+AGG - chr6.1:23819694-23819713 None:intergenic 50.0%
ATAGGGCAAGCTTGGAGCTT+GGG + chr6.1:23818002-23818021 MS.gene054337:CDS 50.0%
ATGTGTCCCATAGCTAGCCA+TGG - chr6.1:23817630-23817649 None:intergenic 50.0%
GGAAAGGAACCCACTTTGGT+GGG - chr6.1:23818073-23818092 None:intergenic 50.0%
GTTTGTAGGTCGCGTAACAG+AGG - chr6.1:23819700-23819719 None:intergenic 50.0%
TACCAAGGAGTGAGCCAGAT+GGG + chr6.1:23818765-23818784 MS.gene054337:CDS 50.0%
TGGAAAGGAACCCACTTTGG+TGG - chr6.1:23818074-23818093 None:intergenic 50.0%
TGTGTCCCATAGCTAGCCAT+GGG - chr6.1:23817629-23817648 None:intergenic 50.0%
! AAGTGGCTGTTGAGGTACCA+AGG + chr6.1:23818750-23818769 MS.gene054337:CDS 50.0%
! AATGGTCCCATGGCTAGCTA+TGG + chr6.1:23817620-23817639 MS.gene054337:CDS 50.0%
! ATATGGGCTAAGATGGGCCA+CGG + chr6.1:23819521-23819540 MS.gene054337:intron 50.0%
! ATGGTCCCATGGCTAGCTAT+GGG + chr6.1:23817621-23817640 MS.gene054337:CDS 50.0%
! CCAGTGGCGGAAGCTTATAT+GGG + chr6.1:23819505-23819524 MS.gene054337:intron 50.0%
! TCCAGTGGCGGAAGCTTATA+TGG + chr6.1:23819504-23819523 MS.gene054337:intron 50.0%
!! GAGGAAGCGTTAAAGTCTGG+TGG - chr6.1:23819626-23819645 None:intergenic 50.0%
AAGGTTCCAGTGGTTCCGGT+CGG + chr6.1:23818275-23818294 MS.gene054337:CDS 55.0%
AATCGGCCGCCGGAAATGAA+AGG - chr6.1:23819736-23819755 None:intergenic 55.0%
ACCAAGGAGTGAGCCAGATG+GGG + chr6.1:23818766-23818785 MS.gene054337:CDS 55.0%
AGCCAGATGGGGCTATCACT+AGG + chr6.1:23818777-23818796 MS.gene054337:CDS 55.0%
CATAGGGCAAGCTTGGAGCT+TGG + chr6.1:23818001-23818020 MS.gene054337:CDS 55.0%
CCCATATAAGCTTCCGCCAC+TGG - chr6.1:23819508-23819527 None:intergenic 55.0%
GCCAGATGGGGCTATCACTA+GGG + chr6.1:23818778-23818797 MS.gene054337:CDS 55.0%
GTACCAAGGAGTGAGCCAGA+TGG + chr6.1:23818764-23818783 MS.gene054337:CDS 55.0%
TCCCTAGTGATAGCCCCATC+TGG - chr6.1:23818782-23818801 None:intergenic 55.0%
! TATGGGCTAAGATGGGCCAC+GGG + chr6.1:23819522-23819541 MS.gene054337:intron 55.0%
!! AGAGAAGGGAGTGCCGAAGT+CGG - chr6.1:23819803-23819822 None:intergenic 55.0%
!! TCCATCTTCACCGCCGACTT+CGG + chr6.1:23819787-23819806 MS.gene054337:CDS 55.0%
!! TCTCTGTCGGTTCGTTCCCT+TGG - chr6.1:23818041-23818060 None:intergenic 55.0%
AGGTTCCAGTGGTTCCGGTC+GGG + chr6.1:23818276-23818295 MS.gene054337:CDS 60.0%
CGGTGAAGATGGAGGTGACG+CGG - chr6.1:23819780-23819799 None:intergenic 60.0%
GAAGTCGGCGGTGAAGATGG+AGG - chr6.1:23819788-23819807 None:intergenic 60.0%
GACAACTGACAATCGGCCGC+CGG - chr6.1:23819746-23819765 None:intergenic 60.0%
!! CTGTCGGTTCGTTCCCTTGG+TGG - chr6.1:23818038-23818057 None:intergenic 60.0%
!!! ATTTTTTGGGGGGTGGCCCG+TGG - chr6.1:23819541-23819560 None:intergenic 60.0%
AGCAACCCGACCGGAACCAC+TGG - chr6.1:23818284-23818303 None:intergenic 65.0%
GAAGATGGAGGTGACGCGGC+TGG - chr6.1:23819776-23819795 None:intergenic 65.0%
GCCGAAGTCGGCGGTGAAGA+TGG - chr6.1:23819791-23819810 None:intergenic 65.0%
! GCCCCATCTGGCTCACTCCT+TGG - chr6.1:23818770-23818789 None:intergenic 65.0%
!! GAAGGGAGTGCCGAAGTCGG+CGG - chr6.1:23819800-23819819 None:intergenic 65.0%
!! GGTGGTGGAAGCAACCCGAC+CGG - chr6.1:23818293-23818312 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 23817567 23819829 23817567 ID=MS.gene054337
chr6.1 mRNA 23817567 23819829 23817567 ID=MS.gene054337.t1;Parent=MS.gene054337
chr6.1 exon 23817567 23818945 23817567 ID=MS.gene054337.t1.exon1;Parent=MS.gene054337.t1
chr6.1 CDS 23817567 23818945 23817567 ID=cds.MS.gene054337.t1;Parent=MS.gene054337.t1
chr6.1 exon 23819619 23819829 23819619 ID=MS.gene054337.t1.exon2;Parent=MS.gene054337.t1
chr6.1 CDS 23819619 23819829 23819619 ID=cds.MS.gene054337.t1;Parent=MS.gene054337.t1
Gene Sequence

>MS.gene054337

ATGGCTTCAATTGTTAATAATGAGAATGAGAATTGCAAGTCTCTTCATGTTGTAATGGTCCCATGGCTAGCTATGGGACACATACTACCTTTTTTTGAGTTGGCCAAGATTCTTGCTCAAAATGGTCACACTGTCACCTTCATAAACTCCCCTAAAAACATTGATCAAATGCCTAAAACACCCAAAACACTTCAACCATTCATCAAGTTGGTAAAATCACCTTTACCATACATAGAAGAACTACAAGGTGCAGAAAGCACTCAAAATGTTCCATTAAACCTAACTGGTTACCTTAAGTTAGCTTATGATGGTTTCCAAGACCATGTTACCGAGATACTCAAAACTTCAAAGCCTGATTGGGTTTTCTGTGATGTGGTATCAGATTGGTTACCGTCGATAGCCAAGAGTTTCAACATTCCTTGTGCGTATTACAGCATAGGGCAAGCTTGGAGCTTGGGTTTCTTTAATCCACCAAGGGAACGAACCGACAGAGACTTGTATAGCCCACCAAAGTGGGTTCCTTTCCAAACAACCATTCATCTCAAACGTTACGAGATTATGAGAATAAAGTCAGCTATGAAGAATGATTCTGGAAAACAACTGAATCGTTCTGATGCCGACAAACTATATGCAAGTATTGACCTTTTTCTTTTCAGAACCTCTAGAGAACTTGAAGGTGAATGGTTAGATTATATTTCTGACCAATACAAGGTTCCAGTGGTTCCGGTCGGGTTGCTTCCACCACCTATGCAGATAAGAGATGACGAAGAAGATGAAAAGAATCATGACTGGGTGAAAATCAAGGAATGGTTGGATTCAAAAGAATCATCTTCTATTGTTTACATTGGATTTGGGAGCGAGTCGAAGTTAAGTCAACAAGATATAACCGAGTTAGCTCATGGAATTGAGCTTTCTAGGTTACCTTTCTTTTGGGCTTTGAAAGATCTTAAAGAGGGTACACTTGAATTACCTAAAGGATTCGAGGAACGAACAAAAGAACGCGGAATTGTTTGGAAAACTTGGGCACCCCAGTTTAAGATCTTAACTCATGGATCAATTGGTGGTTGTATGACTCATTGTGGTCCAAGTTCAGTCATTGAGATGCTTTATCATGAGCATGTTCTTGTGACATTGCCTTATTTACTAGACCAATGTTTGTTTGCAAGAGTATTAGAAGAAAAGAAAGTGGCTGTTGAGGTACCAAGGAGTGAGCCAGATGGGGCTATCACTAGGGACTCTGTTGCCAAAACATTGAGGTTGGTAATAGTGGATGAGGAAGGAAGTATTTACAGGAACAATGCCAAAGAAATGGGAAAGGTTGTCAGTTCAAAGGATATTCACAATGAATACATTGCAAATTTCATTGCCACTCTTCAAAAGTTTAGAGTTCATTCTGAAAATTAAACATATTTCATATACTTCTTCCGGTCATTATTATAAGCAAAACTTCACTTTTTAGATACATTGAATAATTGATGTATCTAGTCTTTATTATAGACTGGACAAATTAATTATTCAATATATCTAAAAAGTGAAGTTTTACTTATAATAGTGACCGGAGGAAGTATATGTTTCCCTTTCAATTTTTTTTTTTTATCTCATTGCAATAATAATCCATGTGATGTTGATGCCAGTAGTGCATTGACAAGAGTTTGACTTTGTAATTTCATGTGACAAAGTTCAAATAGACTACCCTTGTAACATGATCATTACCATTAATAAAAAATGTTTTTTTCCCATTATTTTTGAAAGTTCAAAAGATAAATACTAAATTATTCACTTCGATTCAAATGAAAGTTTATGTATTTAGTTCAAATTTTGGATCAAACACACCAATTAAGGATGGAAGAAGTACGTATGGAATAATCAATATAATTCTTTCACTAATATTCCATATAATTCTTTGTGGATACTAACTAGAGCCATGAATTAATGGCTCCAGTGGCGGAAGCTTATATGGGCTAAGATGGGCCACGGGCCACCCCCCAAAAAATATATTTTTTTTATAGGGAAATTACAAAAATACCCTTATCATATTTTATTTTTCTCAAGTGGTCCACCAGACTTTAACGCTTCCTCTGTTACACGTACACAAAACAAAACTTCTTTGATACTCACTTATTTCCTTTTCCTCTGTTACGCGACCTACAAACCCATAAGTCATAACCTTTCATTTCCGGCGGCCGATTGTCAGTTGTCACTCATTCCAGCCGCGTCACCTCCATCTTCACCGCCGACTTCGGCACTCCCTTCTCTCTTTTAG
Protein sequence

>MS.gene054337.t1

MASIVNNENENCKSLHVVMVPWLAMGHILPFFELAKILAQNGHTVTFINSPKNIDQMPKTPKTLQPFIKLVKSPLPYIEELQGAESTQNVPLNLTGYLKLAYDGFQDHVTEILKTSKPDWVFCDVVSDWLPSIAKSFNIPCAYYSIGQAWSLGFFNPPRERTDRDLYSPPKWVPFQTTIHLKRYEIMRIKSAMKNDSGKQLNRSDADKLYASIDLFLFRTSRELEGEWLDYISDQYKVPVVPVGLLPPPMQIRDDEEDEKNHDWVKIKEWLDSKESSSIVYIGFGSESKLSQQDITELAHGIELSRLPFFWALKDLKEGTLELPKGFEERTKERGIVWKTWAPQFKILTHGSIGGCMTHCGPSSVIEMLYHEHVLVTLPYLLDQCLFARVLEEKKVAVEVPRSEPDGAITRDSVAKTLRLVIVDEEGSIYRNNAKEMGKVVSSKDIHNEYIANFIATLQNGPPDFNASSVTRTQNKTSLILTYFLFLCYATYKPISHNLSFPAADCQLSLIPAASPPSSPPTSALPSLF