Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054340.t1 | XP_003619118.1 | 92.2 | 205 | 16 | 0 | 1 | 205 | 1 | 205 | 1.10E-95 | 359.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054340.t1 | O81098 | 56.9 | 204 | 87 | 1 | 3 | 205 | 2 | 205 | 3.0e-57 | 223.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054340.t1 | G7KIC7 | 92.2 | 205 | 16 | 0 | 1 | 205 | 1 | 205 | 8.1e-96 | 359.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054340 | MS.gene62426 | 0.815401 | 9.42E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054340.t1 | MTR_6g042230 | 92.195 | 205 | 16 | 0 | 1 | 205 | 1 | 205 | 3.01e-138 | 385 |
| MS.gene054340.t1 | MTR_5g005470 | 62.621 | 206 | 76 | 1 | 1 | 205 | 1 | 206 | 2.95e-87 | 256 |
| MS.gene054340.t1 | MTR_5g016200 | 63.682 | 201 | 71 | 1 | 1 | 201 | 1 | 199 | 2.59e-84 | 248 |
| MS.gene054340.t1 | MTR_5g016220 | 61.765 | 204 | 77 | 1 | 3 | 205 | 128 | 331 | 1.11e-82 | 249 |
| MS.gene054340.t1 | MTR_5g016220 | 49.624 | 133 | 64 | 1 | 1 | 130 | 1 | 133 | 2.35e-35 | 127 |
| MS.gene054340.t1 | MTR_6g088010 | 57.005 | 207 | 86 | 1 | 1 | 204 | 1 | 207 | 2.66e-79 | 236 |
| MS.gene054340.t1 | MTR_6g088020 | 55.825 | 206 | 88 | 1 | 1 | 203 | 1 | 206 | 2.16e-76 | 228 |
| MS.gene054340.t1 | MTR_7g090220 | 42.211 | 199 | 113 | 2 | 7 | 204 | 50 | 247 | 9.79e-47 | 154 |
| MS.gene054340.t1 | MTR_3g058520 | 59.091 | 66 | 26 | 1 | 128 | 193 | 94 | 158 | 9.74e-19 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054340.t1 | AT3G22320 | 56.863 | 204 | 87 | 1 | 3 | 205 | 2 | 205 | 3.96e-79 | 235 |
| MS.gene054340.t1 | AT5G57980 | 45.327 | 214 | 104 | 5 | 1 | 205 | 1 | 210 | 4.33e-54 | 172 |
| MS.gene054340.t1 | AT2G41340 | 39.604 | 202 | 120 | 2 | 4 | 204 | 17 | 217 | 1.87e-43 | 145 |
| MS.gene054340.t1 | AT3G57080 | 34.975 | 203 | 130 | 2 | 3 | 204 | 20 | 221 | 8.80e-39 | 133 |
| MS.gene054340.t1 | AT3G54490 | 35.000 | 200 | 128 | 2 | 7 | 205 | 35 | 233 | 9.70e-35 | 123 |
| MS.gene054340.t1 | AT2G41340 | 36.517 | 178 | 102 | 3 | 4 | 180 | 17 | 184 | 8.72e-29 | 107 |
| MS.gene054340.t1 | AT2G41340 | 38.272 | 162 | 98 | 2 | 4 | 164 | 17 | 177 | 5.70e-28 | 104 |
| MS.gene054340.t1 | AT3G16680 | 50.000 | 66 | 28 | 2 | 94 | 155 | 12 | 76 | 4.64e-11 | 57.4 |
Find 37 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCGCATTGAAGCATTTC+TGG | 0.166532 | 6.1:-23722853 | MS.gene054340:intron |
| GATCCTGTTGCGAAATATTA+TGG | 0.255044 | 6.1:-23721286 | MS.gene054340:CDS |
| CTTTGCTTTGAACTCTTGTT+TGG | 0.257576 | 6.1:+23723100 | None:intergenic |
| ACATACCGAATTGTCGTATA+AGG | 0.293822 | 6.1:-23721202 | None:intergenic |
| GGACGCAACGATGGGGATTT+CGG | 0.293895 | 6.1:-23723219 | None:intergenic |
| GGATCCGTCAGCAGCATTCT+AGG | 0.337631 | 6.1:+23721304 | None:intergenic |
| TGCCTGCTGTCTCACTTTGC+CGG | 0.346861 | 6.1:+23721233 | None:intergenic |
| AGTCCATAATATTTCGCAAC+AGG | 0.384158 | 6.1:+23721283 | None:intergenic |
| GACAAGTTGTCCGGATAATC+CGG | 0.393789 | 6.1:-23721252 | MS.gene054340:CDS |
| GGTGTAGGAGGATGAACTTC+TGG | 0.404596 | 6.1:-23722098 | MS.gene054340:intron |
| GCGGTGAGCACTTGATGTTC+CGG | 0.411314 | 6.1:+23722049 | None:intergenic |
| TCTCACTTTGCCGGATTATC+CGG | 0.415858 | 6.1:+23721242 | None:intergenic |
| GTTCAGCTCGGATCGTGCTT+TGG | 0.418124 | 6.1:+23722887 | None:intergenic |
| GAAATCCTTATACGACAATT+CGG | 0.465599 | 6.1:+23721197 | None:intergenic |
| CAATGCGAACTTCAGAGAAA+AGG | 0.466018 | 6.1:+23722865 | None:intergenic |
| TTTCGTGATGATGGCAAACT+TGG | 0.481792 | 6.1:-23722996 | MS.gene054340:CDS |
| TATGTGTTCTTTCGTGATGA+TGG | 0.491128 | 6.1:-23723005 | MS.gene054340:CDS |
| CAAGAGTTCAAAGCAAAGTT+CGG | 0.497834 | 6.1:-23723095 | MS.gene054340:CDS |
| GATGGGGATTTCGGAGGAAG+AGG | 0.499436 | 6.1:-23723210 | MS.gene054340:CDS |
| AAAGAACTCATTGTCGGTGA+GGG | 0.504580 | 6.1:-23722951 | MS.gene054340:CDS |
| GCTATCAAAGAACTCATTGT+CGG | 0.508987 | 6.1:-23722957 | MS.gene054340:CDS |
| TAAAGCGTGGACAAGTTGTC+CGG | 0.515202 | 6.1:-23721261 | MS.gene054340:CDS |
| AAGAACTCATTGTCGGTGAG+GGG | 0.535656 | 6.1:-23722950 | MS.gene054340:CDS |
| ACATGTTTACCTCGGAGTCT+AGG | 0.546900 | 6.1:+23723123 | None:intergenic |
| AACAGAGCATGTGCTAGTGC+CGG | 0.578402 | 6.1:-23722068 | MS.gene054340:CDS |
| TTGTTTGGACATGTTTACCT+CGG | 0.592527 | 6.1:+23723115 | None:intergenic |
| TTCAGAGAAAAGGTTCAGCT+CGG | 0.596409 | 6.1:+23722875 | None:intergenic |
| ATCCGGCAAAGTGAGACAGC+AGG | 0.597444 | 6.1:-23721235 | MS.gene054340:CDS |
| ATACACTGTCAAAGAAACTC+AGG | 0.599555 | 6.1:-23721999 | MS.gene054340:intron |
| CAAGTCTTTCTTCTCAGCAG+CGG | 0.610322 | 6.1:+23722030 | None:intergenic |
| CAAAGAACTCATTGTCGGTG+AGG | 0.613545 | 6.1:-23722952 | MS.gene054340:CDS |
| AAATATTATGGACTAAAGCG+TGG | 0.623203 | 6.1:-23721274 | MS.gene054340:CDS |
| AGAACTCATTGTCGGTGAGG+GGG | 0.627512 | 6.1:-23722949 | MS.gene054340:CDS |
| GCTACCTAGAATGCTGCTGA+CGG | 0.633823 | 6.1:-23721308 | MS.gene054340:CDS |
| CGCAACGATGGGGATTTCGG+AGG | 0.678819 | 6.1:-23723216 | None:intergenic |
| TTACCTCGGAGTCTAGGACA+TGG | 0.719913 | 6.1:+23723129 | None:intergenic |
| CTACCATGTCCTAGACTCCG+AGG | 0.738073 | 6.1:-23723132 | MS.gene054340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTATAATCTAATATTTA+TGG | - | chr6.1:23723071-23723090 | MS.gene054340:CDS | 10.0% |
| !! | AGAATATTATAATTGCAAAT+AGG | + | chr6.1:23723030-23723049 | None:intergenic | 15.0% |
| !! | ATAATGTCAATTCATAAATT+TGG | + | chr6.1:23721704-23721723 | None:intergenic | 15.0% |
| !! | TGATTATAAATTTCAATTGA+AGG | + | chr6.1:23721775-23721794 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTGTTAGAATAGA+TGG | - | chr6.1:23722212-23722231 | MS.gene054340:intron | 15.0% |
| !!! | GTCTTTTAAATTTAACAAAT+AGG | - | chr6.1:23721741-23721760 | MS.gene054340:intron | 15.0% |
| !! | TTCATTTAACCTAAACTATA+AGG | - | chr6.1:23721933-23721952 | MS.gene054340:intron | 20.0% |
| !!! | TATTAGTTTTTTGAATAGTG+AGG | + | chr6.1:23721365-23721384 | None:intergenic | 20.0% |
| !!! | TTTTTTGAATGGATAAACTA+CGG | - | chr6.1:23722086-23722105 | MS.gene054340:CDS | 20.0% |
| ! | ACATTCATATAACTTTGCAA+GGG | + | chr6.1:23722011-23722030 | None:intergenic | 25.0% |
| ! | ACATTTGAAAAACTGTTCTA+CGG | + | chr6.1:23721248-23721267 | None:intergenic | 25.0% |
| ! | AGCTATATAGTTGTTAAAAC+AGG | - | chr6.1:23721624-23721643 | MS.gene054340:intron | 25.0% |
| ! | ATGAATGTATAGAAAATGAC+AGG | - | chr6.1:23722023-23722042 | MS.gene054340:CDS | 25.0% |
| ! | CGTTTGTTTAATCTAGAAAA+TGG | + | chr6.1:23722882-23722901 | None:intergenic | 25.0% |
| ! | GCTATATAGTTGTTAAAACA+GGG | - | chr6.1:23721625-23721644 | MS.gene054340:intron | 25.0% |
| ! | GTTCTCATCTACATATTAAA+AGG | + | chr6.1:23722527-23722546 | None:intergenic | 25.0% |
| ! | TACATTCATATAACTTTGCA+AGG | + | chr6.1:23722012-23722031 | None:intergenic | 25.0% |
| ! | TTAACCTAAACTATAAGGTA+AGG | - | chr6.1:23721938-23721957 | MS.gene054340:intron | 25.0% |
| ! | TTTAATCTAGAAAATGGATC+AGG | + | chr6.1:23722876-23722895 | None:intergenic | 25.0% |
| !! | AAAGAACACATAGATTTTGT+CGG | + | chr6.1:23721400-23721419 | None:intergenic | 25.0% |
| !! | ATTTTGCAATTTCGTAAAAC+CGG | - | chr6.1:23721865-23721884 | MS.gene054340:intron | 25.0% |
| !! | TCTTCATCTTATAGATGTTT+TGG | - | chr6.1:23722983-23723002 | MS.gene054340:CDS | 25.0% |
| !! | TTTTCTAGATTAAACAAACG+AGG | - | chr6.1:23722882-23722901 | MS.gene054340:CDS | 25.0% |
| !!! | GTTTTAACAACTATATAGCT+AGG | + | chr6.1:23721624-23721643 | None:intergenic | 25.0% |
| AATTCTATTTACATGCACCT+TGG | - | chr6.1:23722646-23722665 | MS.gene054340:intron | 30.0% | |
| ATAGTATAAGGGAAAACAAC+AGG | - | chr6.1:23722144-23722163 | MS.gene054340:intron | 30.0% | |
| ATATAGCTAGGTAGTGATTT+AGG | + | chr6.1:23721612-23721631 | None:intergenic | 30.0% | |
| ATGAAGAGATCCAATTCAAT+TGG | + | chr6.1:23722752-23722771 | None:intergenic | 30.0% | |
| ATTCTGCAATCCAATTGAAT+TGG | - | chr6.1:23722739-23722758 | MS.gene054340:intron | 30.0% | |
| GAATATATTTCTTCGTGTGT+TGG | - | chr6.1:23722257-23722276 | MS.gene054340:intron | 30.0% | |
| GAATGAATAATGTCCAAACT+TGG | + | chr6.1:23722914-23722933 | None:intergenic | 30.0% | |
| GTTACCTTACCTTATAGTTT+AGG | + | chr6.1:23721945-23721964 | None:intergenic | 30.0% | |
| GTTTGATCGTTAATATTGCA+AGG | + | chr6.1:23721907-23721926 | None:intergenic | 30.0% | |
| TAGAAAATGACAGGAAATTG+AGG | - | chr6.1:23722032-23722051 | MS.gene054340:CDS | 30.0% | |
| TAGTATAAGGGAAAACAACA+GGG | - | chr6.1:23722145-23722164 | MS.gene054340:intron | 30.0% | |
| TATAGCTAGGTAGTGATTTA+GGG | + | chr6.1:23721611-23721630 | None:intergenic | 30.0% | |
| ! | AAATATTATGGACTAAAGCG+TGG | - | chr6.1:23723139-23723158 | MS.gene054340:CDS | 30.0% |
| !!! | AGCGAAAGACTTTTTTTGAA+TGG | - | chr6.1:23722075-23722094 | MS.gene054340:CDS | 30.0% |
| AGGATCAACAATTTACTCTC+CGG | + | chr6.1:23721887-23721906 | None:intergenic | 35.0% | |
| AGTCCATAATATTTCGCAAC+AGG | + | chr6.1:23723133-23723152 | None:intergenic | 35.0% | |
| AGTTTCCAATTCAGGTATCA+AGG | + | chr6.1:23722565-23722584 | None:intergenic | 35.0% | |
| ATACACTGTCAAAGAAACTC+AGG | - | chr6.1:23722414-23722433 | MS.gene054340:intron | 35.0% | |
| ATAGCTAGGTAGTGATTTAG+GGG | + | chr6.1:23721610-23721629 | None:intergenic | 35.0% | |
| ATGTGAGCTGAATTTCTGAA+TGG | + | chr6.1:23722614-23722633 | None:intergenic | 35.0% | |
| CAAGAGTTCAAAGCAAAGTT+CGG | - | chr6.1:23721318-23721337 | MS.gene054340:intron | 35.0% | |
| CCACATTTCATTACTCATTG+GGG | - | chr6.1:23722188-23722207 | MS.gene054340:intron | 35.0% | |
| GATCCTGTTGCGAAATATTA+TGG | - | chr6.1:23723127-23723146 | MS.gene054340:CDS | 35.0% | |
| GATTTAGGGGTTAGAAGAAA+GGG | + | chr6.1:23721597-23721616 | None:intergenic | 35.0% | |
| GCCACATTTCATTACTCATT+GGG | - | chr6.1:23722187-23722206 | MS.gene054340:intron | 35.0% | |
| GCTATCAAAGAACTCATTGT+CGG | - | chr6.1:23721456-23721475 | MS.gene054340:intron | 35.0% | |
| GGACATGGGAAAAAATTGAA+TGG | - | chr6.1:23722687-23722706 | MS.gene054340:intron | 35.0% | |
| GGACATTATTCATTCAAGCA+TGG | - | chr6.1:23722919-23722938 | MS.gene054340:CDS | 35.0% | |
| GTACTCAAGAATTGTTGAGA+GGG | - | chr6.1:23721647-23721666 | MS.gene054340:intron | 35.0% | |
| TAATGCCTTGATACCTGAAT+TGG | - | chr6.1:23722557-23722576 | MS.gene054340:intron | 35.0% | |
| TATGTGTTCTTTCGTGATGA+TGG | - | chr6.1:23721408-23721427 | MS.gene054340:intron | 35.0% | |
| TCATGTTAGATGGAACACAA+CGG | - | chr6.1:23722768-23722787 | MS.gene054340:intron | 35.0% | |
| TGAATGGATAAACTACGGAT+AGG | - | chr6.1:23722091-23722110 | MS.gene054340:CDS | 35.0% | |
| TGATACCTGAATTGGAAACT+AGG | - | chr6.1:23722565-23722584 | MS.gene054340:intron | 35.0% | |
| TGATTTAGGGGTTAGAAGAA+AGG | + | chr6.1:23721598-23721617 | None:intergenic | 35.0% | |
| TGCCACATTTCATTACTCAT+TGG | - | chr6.1:23722186-23722205 | MS.gene054340:intron | 35.0% | |
| TTGGATCTCTTCATGTTAGA+TGG | - | chr6.1:23722758-23722777 | MS.gene054340:intron | 35.0% | |
| TTGTTTGGACATGTTTACCT+CGG | + | chr6.1:23721301-23721320 | None:intergenic | 35.0% | |
| ! | AACACATAGATTTTGTCGGA+AGG | + | chr6.1:23721396-23721415 | None:intergenic | 35.0% |
| ! | ATATTTCTTCGTGTGTTGGT+AGG | - | chr6.1:23722261-23722280 | MS.gene054340:intron | 35.0% |
| ! | CTTTGCTTTGAACTCTTGTT+TGG | + | chr6.1:23721316-23721335 | None:intergenic | 35.0% |
| AAAGAACTCATTGTCGGTGA+GGG | - | chr6.1:23721462-23721481 | MS.gene054340:intron | 40.0% | |
| AACAATGCATGCAAGGACAT+GGG | - | chr6.1:23722673-23722692 | MS.gene054340:intron | 40.0% | |
| AGGTAAGGTAACACTTGTAG+TGG | - | chr6.1:23721953-23721972 | MS.gene054340:intron | 40.0% | |
| ATGGATAAACTACGGATAGG+TGG | - | chr6.1:23722094-23722113 | MS.gene054340:CDS | 40.0% | |
| CAATGCGAACTTCAGAGAAA+AGG | + | chr6.1:23721551-23721570 | None:intergenic | 40.0% | |
| CCCCAATGAGTAATGAAATG+TGG | + | chr6.1:23722191-23722210 | None:intergenic | 40.0% | |
| GGTACTCAAGAATTGTTGAG+AGG | - | chr6.1:23721646-23721665 | MS.gene054340:intron | 40.0% | |
| TAACGGTTTGATGTATGTGC+TGG | - | chr6.1:23722291-23722310 | MS.gene054340:intron | 40.0% | |
| TCTATGACAAACTTCTGCTG+CGG | - | chr6.1:23723047-23723066 | MS.gene054340:CDS | 40.0% | |
| TGCATGCATTGTTCAATCCA+AGG | + | chr6.1:23722666-23722685 | None:intergenic | 40.0% | |
| TGCGCGATTGCATAGTATAA+GGG | - | chr6.1:23722133-23722152 | MS.gene054340:intron | 40.0% | |
| TGGATTGAACAATGCATGCA+AGG | - | chr6.1:23722666-23722685 | MS.gene054340:intron | 40.0% | |
| TTATACTATGCAATCGCGCA+CGG | + | chr6.1:23722133-23722152 | None:intergenic | 40.0% | |
| TTCAGAGAAAAGGTTCAGCT+CGG | + | chr6.1:23721541-23721560 | None:intergenic | 40.0% | |
| ! | AACGAGGTATCTACCAAGTT+TGG | - | chr6.1:23722898-23722917 | MS.gene054340:CDS | 40.0% |
| ! | AGTTCGCATTGAAGCATTTC+TGG | - | chr6.1:23721560-23721579 | MS.gene054340:intron | 40.0% |
| ! | GGTATCAAGGCATTACAATG+CGG | + | chr6.1:23722552-23722571 | None:intergenic | 40.0% |
| ! | TGTTGGTAGGTTGTCGTTAA+CGG | - | chr6.1:23722274-23722293 | MS.gene054340:intron | 40.0% |
| !! | TTTCGTGATGATGGCAAACT+TGG | - | chr6.1:23721417-23721436 | MS.gene054340:intron | 40.0% |
| AAGAACTCATTGTCGGTGAG+GGG | - | chr6.1:23721463-23721482 | MS.gene054340:intron | 45.0% | |
| ACATGTTTACCTCGGAGTCT+AGG | + | chr6.1:23721293-23721312 | None:intergenic | 45.0% | |
| CAAAGAACTCATTGTCGGTG+AGG | - | chr6.1:23721461-23721480 | MS.gene054340:intron | 45.0% | |
| CAAGTCTTTCTTCTCAGCAG+CGG | + | chr6.1:23722386-23722405 | None:intergenic | 45.0% | |
| CAGAGCCTAGTTTCCAATTC+AGG | + | chr6.1:23722573-23722592 | None:intergenic | 45.0% | |
| GAACAATGCATGCAAGGACA+TGG | - | chr6.1:23722672-23722691 | MS.gene054340:intron | 45.0% | |
| GACAAGTTGTCCGGATAATC+CGG | - | chr6.1:23723161-23723180 | MS.gene054340:CDS | 45.0% | |
| GTGCGCGATTGCATAGTATA+AGG | - | chr6.1:23722132-23722151 | MS.gene054340:intron | 45.0% | |
| TAAAGCGTGGACAAGTTGTC+CGG | - | chr6.1:23723152-23723171 | MS.gene054340:CDS | 45.0% | |
| TATACTATGCAATCGCGCAC+GGG | + | chr6.1:23722132-23722151 | None:intergenic | 45.0% | |
| TCTCACTTTGCCGGATTATC+CGG | + | chr6.1:23723174-23723193 | None:intergenic | 45.0% | |
| !! | AATTATAATCTAATATTTAT+GGG | - | chr6.1:23723072-23723091 | MS.gene054340:CDS | 5.0% |
| AACAGAGCATGTGCTAGTGC+CGG | - | chr6.1:23722345-23722364 | MS.gene054340:intron | 50.0% | |
| AGAACTCATTGTCGGTGAGG+GGG | - | chr6.1:23721464-23721483 | MS.gene054340:intron | 50.0% | |
| CGGTTTGATGTATGTGCTGG+TGG | - | chr6.1:23722294-23722313 | MS.gene054340:intron | 50.0% | |
| GCTACCTAGAATGCTGCTGA+CGG | - | chr6.1:23723105-23723124 | MS.gene054340:CDS | 50.0% | |
| GGTGTAGGAGGATGAACTTC+TGG | - | chr6.1:23722315-23722334 | MS.gene054340:intron | 50.0% | |
| ! | GATGTATGTGCTGGTGGTGT+AGG | - | chr6.1:23722300-23722319 | MS.gene054340:intron | 50.0% |
| ! | TTACCTCGGAGTCTAGGACA+TGG | + | chr6.1:23721287-23721306 | None:intergenic | 50.0% |
| ATCCGGCAAAGTGAGACAGC+AGG | - | chr6.1:23723178-23723197 | MS.gene054340:CDS | 55.0% | |
| CTACCATGTCCTAGACTCCG+AGG | - | chr6.1:23721281-23721300 | MS.gene054340:CDS | 55.0% | |
| GCGGTGAGCACTTGATGTTC+CGG | + | chr6.1:23722367-23722386 | None:intergenic | 55.0% | |
| GGATCCGTCAGCAGCATTCT+AGG | + | chr6.1:23723112-23723131 | None:intergenic | 55.0% | |
| GTTCAGCTCGGATCGTGCTT+TGG | + | chr6.1:23721529-23721548 | None:intergenic | 55.0% | |
| TGCCTGCTGTCTCACTTTGC+CGG | + | chr6.1:23723183-23723202 | None:intergenic | 55.0% | |
| ! | GTATGTGCTGGTGGTGTAGG+AGG | - | chr6.1:23722303-23722322 | MS.gene054340:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 23721204 | 23723231 | 23721204 | ID=MS.gene054340 |
| chr6.1 | mRNA | 23721204 | 23723231 | 23721204 | ID=MS.gene054340.t1;Parent=MS.gene054340 |
| chr6.1 | exon | 23722854 | 23723231 | 23722854 | ID=MS.gene054340.t1.exon1;Parent=MS.gene054340.t1 |
| chr6.1 | CDS | 23722854 | 23723231 | 23722854 | ID=cds.MS.gene054340.t1;Parent=MS.gene054340.t1 |
| chr6.1 | exon | 23722000 | 23722113 | 23722000 | ID=MS.gene054340.t1.exon2;Parent=MS.gene054340.t1 |
| chr6.1 | CDS | 23722000 | 23722113 | 23722000 | ID=cds.MS.gene054340.t1;Parent=MS.gene054340.t1 |
| chr6.1 | exon | 23721204 | 23721329 | 23721204 | ID=MS.gene054340.t1.exon3;Parent=MS.gene054340.t1 |
| chr6.1 | CDS | 23721204 | 23721329 | 23721204 | ID=cds.MS.gene054340.t1;Parent=MS.gene054340.t1 |
| Gene Sequence |
| Protein sequence |