AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054423

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054423.t1 MTR_7g112490 96.817 377 12 0 1 377 19 395 0.0 766
MS.gene054423.t1 MTR_7g112490 96.817 377 12 0 1 377 1 377 0.0 765
MS.gene054423.t1 MTR_1g083690 77.072 362 72 5 1 362 1 351 0.0 555
MS.gene054423.t1 MTR_4g120410 59.945 362 136 2 1 362 1 353 6.01e-165 466
MS.gene054423.t1 MTR_2g435550 60.331 363 134 3 1 362 1 354 2.44e-164 464
MS.gene054423.t1 MTR_2g435550 63.772 334 112 2 29 362 16 340 1.13e-162 459
MS.gene054423.t1 MTR_2g435550 59.475 343 129 3 1 342 1 334 5.72e-152 434
MS.gene054423.t1 MTR_7g080170 50.898 334 134 3 52 361 57 384 5.23e-111 333
MS.gene054423.t1 MTR_7g021530 49.691 324 150 3 50 362 47 368 3.51e-106 318
MS.gene054423.t1 MTR_7g021530 49.691 324 150 3 50 362 88 409 1.44e-105 318
MS.gene054423.t1 MTR_8g017240 50.799 313 137 5 50 362 45 340 1.42e-103 310
MS.gene054423.t1 MTR_4g037470 45.370 324 170 3 52 370 58 379 5.43e-102 310
MS.gene054423.t1 MTR_2g090190 46.708 319 164 3 55 369 55 371 1.71e-99 303
MS.gene054423.t1 MTR_4g037470 44.144 333 170 4 52 370 58 388 5.49e-99 302
MS.gene054423.t1 MTR_7g070510 44.479 326 173 3 52 371 53 376 1.75e-97 297
MS.gene054423.t1 MTR_7g021530 49.832 297 134 4 77 362 26 318 8.65e-94 285
MS.gene054423.t1 MTR_4g013295 43.269 312 162 4 56 362 43 344 4.05e-91 278
MS.gene054423.t1 MTR_7g021530 49.455 275 127 2 50 313 47 320 6.73e-88 268
MS.gene054423.t1 MTR_7g021530 49.455 275 127 2 50 313 88 361 2.93e-87 268
MS.gene054423.t1 MTR_7g080170 48.936 282 114 3 104 361 1 276 1.37e-82 257
MS.gene054423.t1 MTR_1g016620 42.671 307 157 5 60 362 38 329 2.11e-75 237
MS.gene054423.t1 MTR_7g021530 41.905 210 110 2 50 248 47 255 9.97e-48 163
MS.gene054423.t1 MTR_7g021530 41.905 210 110 2 50 248 88 296 3.31e-47 163
MS.gene054423.t1 MTR_6g087000 28.875 329 170 6 62 362 90 382 6.06e-33 130
MS.gene054423.t1 MTR_6g087000 27.179 390 210 7 11 362 29 382 8.01e-33 130
MS.gene054423.t1 MTR_4g118340 26.885 305 171 6 73 359 68 338 4.47e-29 116
MS.gene054423.t1 MTR_2g020970 28.144 334 180 9 57 364 45 344 2.25e-28 114
MS.gene054423.t1 MTR_2g020970 28.144 334 180 9 57 364 45 344 4.19e-28 114
MS.gene054423.t1 MTR_3g105730 31.325 249 117 9 93 338 67 264 4.50e-25 103
MS.gene054423.t1 MTR_3g105730 30.800 250 117 9 93 338 45 242 5.83e-25 103
MS.gene054423.t1 MTR_1g014640 31.727 249 116 9 93 338 110 307 9.64e-25 103
MS.gene054423.t1 MTR_1g013400 31.727 249 116 9 93 338 110 307 9.64e-25 103
MS.gene054423.t1 MTR_2g078760 33.455 275 126 12 88 361 35 253 2.25e-24 100
MS.gene054423.t1 MTR_2g078760 33.455 275 126 12 88 361 114 332 1.12e-23 100
MS.gene054423.t1 MTR_1g115570 30.935 278 130 13 91 366 126 343 2.50e-23 99.8
MS.gene054423.t1 MTR_2g008850 37.931 203 98 10 159 359 56 232 3.74e-23 97.1
MS.gene054423.t1 MTR_6g081850 31.461 267 128 8 94 347 82 306 1.47e-22 97.4
MS.gene054423.t1 MTR_2g008850 39.888 178 82 8 183 359 125 278 1.65e-22 96.3
MS.gene054423.t1 MTR_3g068200 29.483 329 182 11 3 321 33 321 5.01e-22 96.7
MS.gene054423.t1 MTR_3g074610 38.916 203 96 10 159 359 103 279 1.41e-21 94.0
MS.gene054423.t1 MTR_5g063940 37.931 203 98 10 159 359 56 232 4.08e-21 91.7
MS.gene054423.t1 MTR_5g009370 40.541 148 71 4 176 323 150 280 9.30e-21 92.4
MS.gene054423.t1 MTR_5g063940 39.326 178 83 8 183 359 126 279 9.36e-21 91.7
MS.gene054423.t1 MTR_8g463130 30.370 270 131 11 94 362 69 282 1.06e-20 91.3
MS.gene054423.t1 MTR_8g463130 30.370 270 131 11 94 362 41 254 1.10e-20 90.9
MS.gene054423.t1 MTR_4g094208 36.019 211 104 11 154 359 90 274 1.12e-20 91.3
MS.gene054423.t1 MTR_1g050520 26.603 312 173 11 64 369 391 652 2.74e-20 93.2
MS.gene054423.t1 MTR_4g094542 32.683 205 111 10 158 361 186 364 3.24e-20 91.3
MS.gene054423.t1 MTR_4g125810 32.174 230 119 9 91 320 253 445 6.27e-20 91.7
MS.gene054423.t1 MTR_5g080680 30.651 261 133 10 68 321 109 328 6.63e-20 90.9
MS.gene054423.t1 MTR_3g104710 28.679 265 144 8 59 320 262 484 9.79e-18 85.1
MS.gene054423.t1 MTR_3g091060 28.041 296 156 9 65 359 99 338 1.02e-17 84.0
MS.gene054423.t1 MTR_3g464700 29.615 260 132 10 62 320 89 298 7.12e-17 81.3
MS.gene054423.t1 MTR_3g464650 28.339 307 156 13 62 361 65 314 1.52e-16 80.1
MS.gene054423.t1 MTR_2g040500 32.780 241 122 9 91 319 267 479 2.62e-16 80.9
MS.gene054423.t1 MTR_1g116260 27.103 321 152 14 91 367 80 362 3.36e-16 79.7
MS.gene054423.t1 MTR_8g102550 30.870 230 118 8 91 320 152 340 3.48e-16 79.7
MS.gene054423.t1 MTR_3g107880 28.125 288 135 14 91 364 63 292 5.80e-16 78.6
MS.gene054423.t1 MTR_3g107880 28.125 288 135 14 91 364 121 350 8.55e-16 78.6
MS.gene054423.t1 MTR_3g107880 28.125 288 135 14 91 364 120 349 8.90e-16 78.6
MS.gene054423.t1 MTR_1g015110 30.901 233 124 9 91 320 290 488 9.45e-16 79.0
MS.gene054423.t1 MTR_8g074930 30.144 209 94 10 193 361 45 241 1.63e-15 76.6
MS.gene054423.t1 MTR_4g116420 26.667 285 157 11 85 364 118 355 1.65e-15 77.8
MS.gene054423.t1 MTR_1g067210 27.742 310 152 12 91 362 76 351 3.31e-15 76.6
MS.gene054423.t1 MTR_5g071550 27.508 309 172 13 54 361 117 374 3.70e-15 76.6
MS.gene054423.t1 MTR_8g074930 30.137 219 101 10 183 361 147 353 3.89e-15 76.6
MS.gene054423.t1 MTR_1g086350 28.571 238 120 11 91 321 118 312 4.67e-15 76.3
MS.gene054423.t1 MTR_1g086350 28.571 238 120 11 91 321 102 296 4.99e-15 76.3
MS.gene054423.t1 MTR_3g032660 26.586 331 153 13 88 369 65 354 5.30e-15 76.3
MS.gene054423.t1 MTR_3g032700 26.586 331 153 13 88 369 65 354 7.71e-15 75.9
MS.gene054423.t1 MTR_1g028300 40.164 122 56 4 200 321 226 330 1.31e-14 75.1
MS.gene054423.t1 MTR_1g014190 26.459 257 142 7 91 321 52 287 2.48e-14 73.9
MS.gene054423.t1 MTR_1g014190 26.459 257 142 7 91 321 90 325 3.16e-14 73.9
MS.gene054423.t1 MTR_1g086350 33.793 145 72 5 182 321 85 210 3.41e-14 72.8
MS.gene054423.t1 MTR_4g123080 25.077 323 177 12 58 363 54 328 4.83e-14 73.2
MS.gene054423.t1 MTR_4g123080 25.077 323 177 12 58 363 72 346 5.49e-14 73.2
MS.gene054423.t1 MTR_3g105880 27.132 258 139 9 91 321 52 287 8.75e-14 72.4
MS.gene054423.t1 MTR_1g112840 27.010 311 151 14 91 361 81 355 8.92e-14 72.4
MS.gene054423.t1 MTR_2g078760 29.956 227 109 10 86 311 112 289 9.46e-14 71.6
MS.gene054423.t1 MTR_3g105880 27.132 258 139 9 91 321 52 287 1.45e-13 71.2
MS.gene054423.t1 MTR_3g032590 29.870 231 109 9 181 369 141 360 2.75e-13 71.2
MS.gene054423.t1 MTR_2g033000 25.725 276 155 9 91 357 100 334 7.66e-13 69.3
MS.gene054423.t1 MTR_1g083750 30.556 216 122 11 165 372 24 219 1.31e-12 68.6
MS.gene054423.t1 MTR_1g083750 30.556 216 122 11 165 372 116 311 1.76e-12 68.6
MS.gene054423.t1 MTR_7g029240 36.496 137 75 5 182 315 135 262 2.23e-12 68.6
MS.gene054423.t1 MTR_4g119830 30.337 178 91 4 170 323 264 432 3.20e-12 68.2
MS.gene054423.t1 MTR_1g110210 27.798 277 147 15 94 364 71 300 3.67e-12 67.0
MS.gene054423.t1 MTR_7g090530 26.165 279 142 12 88 339 66 307 3.97e-12 67.8
MS.gene054423.t1 MTR_4g007440 31.973 147 73 4 183 321 160 287 5.34e-12 67.0
MS.gene054423.t1 MTR_7g112430 35.849 159 84 7 182 335 131 276 7.50e-12 66.6
MS.gene054423.t1 MTR_1g019760 30.198 202 115 10 182 374 128 312 3.17e-11 64.7
MS.gene054423.t1 MTR_1g019760 30.198 202 115 10 182 374 128 312 4.97e-11 64.3
MS.gene054423.t1 MTR_7g100240 24.839 310 161 15 91 362 71 346 9.22e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054423.t1 AT3G05640 72.527 364 84 3 1 362 1 350 0.0 546
MS.gene054423.t1 AT3G05640 72.527 364 84 3 1 362 1 350 0.0 546
MS.gene054423.t1 AT3G05640 72.527 364 84 3 1 362 1 350 0.0 546
MS.gene054423.t1 AT5G27930 70.360 361 98 5 1 360 1 353 0.0 540
MS.gene054423.t1 AT5G27930 70.360 361 98 5 1 360 1 353 0.0 540
MS.gene054423.t1 AT5G27930 70.874 309 81 5 1 308 1 301 8.54e-165 464
MS.gene054423.t1 AT3G16800 54.247 365 150 2 1 363 1 350 8.29e-139 399
MS.gene054423.t1 AT3G16800 54.247 365 150 2 1 363 1 350 8.29e-139 399
MS.gene054423.t1 AT3G16800 54.247 365 150 2 1 363 1 350 8.29e-139 399
MS.gene054423.t1 AT1G79630 45.797 345 154 3 50 362 57 400 1.78e-107 325
MS.gene054423.t1 AT1G79630 45.797 345 154 3 50 362 53 396 2.69e-107 324
MS.gene054423.t1 AT3G16800 57.778 270 99 1 94 363 1 255 1.26e-106 314
MS.gene054423.t1 AT3G16800 57.778 270 99 1 94 363 1 255 1.26e-106 314
MS.gene054423.t1 AT3G02750 43.501 377 180 4 14 361 21 393 3.03e-106 321
MS.gene054423.t1 AT3G02750 43.501 377 180 4 14 361 21 393 3.03e-106 321
MS.gene054423.t1 AT1G16220 45.732 328 159 3 50 362 54 377 3.58e-104 316
MS.gene054423.t1 AT5G36250 46.505 329 158 3 50 361 57 384 1.49e-102 310
MS.gene054423.t1 AT5G36250 44.898 343 157 4 50 361 57 398 1.11e-98 301
MS.gene054423.t1 AT3G02750 39.806 412 180 5 14 361 21 428 1.99e-98 302
MS.gene054423.t1 AT4G03415 47.302 315 156 4 63 370 70 381 3.74e-98 300
MS.gene054423.t1 AT4G03415 47.302 315 156 4 63 370 70 381 3.74e-98 300
MS.gene054423.t1 AT4G03415 47.302 315 156 4 63 370 70 381 3.74e-98 300
MS.gene054423.t1 AT1G79630 46.497 314 135 3 81 362 18 330 1.33e-97 297
MS.gene054423.t1 AT1G79630 46.497 314 135 3 81 362 18 330 1.33e-97 297
MS.gene054423.t1 AT1G03590 46.452 310 161 4 55 361 55 362 1.39e-96 295
MS.gene054423.t1 AT5G01700 43.574 319 168 4 51 368 38 345 3.90e-90 276
MS.gene054423.t1 AT5G01700 44.737 304 156 4 66 368 4 296 1.56e-89 273
MS.gene054423.t1 AT5G36250 46.918 292 136 4 50 323 57 347 3.78e-86 265
MS.gene054423.t1 AT1G79630 45.361 291 126 3 104 362 1 290 1.03e-83 260
MS.gene054423.t1 AT1G79630 45.361 291 126 3 104 362 1 290 1.03e-83 260
MS.gene054423.t1 AT1G79630 45.361 291 126 3 104 362 1 290 1.03e-83 260
MS.gene054423.t1 AT1G79630 45.361 291 126 3 104 362 1 290 1.03e-83 260
MS.gene054423.t1 AT4G32950 42.444 311 150 5 59 368 41 323 5.18e-77 241
MS.gene054423.t1 AT5G26010 43.042 309 154 6 60 367 43 330 3.02e-73 231
MS.gene054423.t1 AT3G16800 48.718 234 103 2 1 232 1 219 3.75e-70 220
MS.gene054423.t1 AT4G32950 43.426 251 113 5 59 308 41 263 2.93e-59 193
MS.gene054423.t1 AT2G20050 29.052 327 167 8 62 361 109 397 1.93e-32 129
MS.gene054423.t1 AT2G20050 29.052 327 167 8 62 361 109 397 2.14e-32 129
MS.gene054423.t1 AT3G06270 29.373 303 155 8 50 326 40 309 4.33e-29 115
MS.gene054423.t1 AT2G20630 32.609 276 123 12 88 359 60 276 1.44e-25 104
MS.gene054423.t1 AT2G20630 34.191 272 122 13 88 358 60 275 4.01e-25 103
MS.gene054423.t1 AT5G10740 30.882 272 134 8 91 362 64 281 9.78e-25 103
MS.gene054423.t1 AT5G10740 30.882 272 134 8 91 362 64 281 9.78e-25 103
MS.gene054423.t1 AT5G24940 30.996 271 133 8 91 361 64 280 1.34e-24 104
MS.gene054423.t1 AT4G31750 31.349 252 122 9 93 344 66 266 4.14e-24 101
MS.gene054423.t1 AT4G31750 31.746 252 121 10 93 344 66 266 5.31e-24 101
MS.gene054423.t1 AT4G31750 31.746 252 121 10 93 344 66 266 5.31e-24 101
MS.gene054423.t1 AT4G28400 38.122 181 87 9 183 362 105 261 1.04e-23 99.4
MS.gene054423.t1 AT4G28400 38.122 181 87 9 183 362 127 283 1.33e-23 99.4
MS.gene054423.t1 AT5G59220 33.755 237 109 9 91 321 148 342 2.93e-21 94.7
MS.gene054423.t1 AT1G78200 34.314 204 111 8 157 359 54 235 2.72e-20 89.4
MS.gene054423.t1 AT1G78200 34.314 204 111 8 157 359 54 235 2.72e-20 89.4
MS.gene054423.t1 AT2G25620 29.514 288 149 12 91 372 128 367 4.43e-20 91.3
MS.gene054423.t1 AT2G25620 29.514 288 149 12 91 372 128 367 4.43e-20 91.3
MS.gene054423.t1 AT1G78200 34.314 204 111 8 157 359 99 280 4.66e-20 89.7
MS.gene054423.t1 AT1G78200 34.314 204 111 8 157 359 99 280 4.66e-20 89.7
MS.gene054423.t1 AT1G78200 34.314 204 111 8 157 359 99 280 4.66e-20 89.7
MS.gene054423.t1 AT1G07430 32.468 231 123 9 91 321 157 354 4.77e-20 91.7
MS.gene054423.t1 AT1G34750 36.111 180 90 8 183 361 126 281 5.32e-20 89.4
MS.gene054423.t1 AT1G34750 36.111 180 90 8 183 361 126 281 5.32e-20 89.4
MS.gene054423.t1 AT1G34750 36.111 180 90 8 183 361 126 281 5.32e-20 89.4
MS.gene054423.t1 AT1G43900 30.364 247 121 9 91 336 154 350 1.12e-19 89.7
MS.gene054423.t1 AT5G53140 27.324 355 200 13 9 362 52 349 1.73e-19 89.7
MS.gene054423.t1 AT5G53140 27.324 355 200 13 9 362 52 349 1.73e-19 89.7
MS.gene054423.t1 AT3G15260 37.640 178 86 8 183 359 133 286 7.49e-19 86.3
MS.gene054423.t1 AT3G15260 37.640 178 86 8 183 359 133 286 7.49e-19 86.3
MS.gene054423.t1 AT3G62260 30.403 273 140 13 91 357 27 255 8.86e-19 86.3
MS.gene054423.t1 AT3G11410 30.864 243 125 8 87 320 133 341 9.51e-19 87.4
MS.gene054423.t1 AT2G40180 27.900 319 158 15 58 362 126 386 1.40e-18 87.0
MS.gene054423.t1 AT3G62260 30.182 275 142 13 91 359 117 347 2.36e-18 86.3
MS.gene054423.t1 AT3G62260 30.182 275 142 13 91 359 116 346 2.45e-18 86.3
MS.gene054423.t1 AT5G57050 31.304 230 120 9 91 320 120 311 1.60e-17 83.6
MS.gene054423.t1 AT4G26080 32.353 238 121 9 83 320 164 361 1.87e-17 84.0
MS.gene054423.t1 AT5G57050 31.304 230 120 9 91 320 160 351 1.92e-17 84.0
MS.gene054423.t1 AT2G34740 34.078 179 94 9 182 359 177 332 3.60e-17 82.0
MS.gene054423.t1 AT3G51370 26.861 309 154 13 91 361 79 353 7.08e-17 81.6
MS.gene054423.t1 AT3G51370 26.861 309 154 13 91 361 79 353 7.08e-17 81.6
MS.gene054423.t1 AT3G51370 30.435 207 96 8 193 361 72 268 1.97e-16 79.3
MS.gene054423.t1 AT3G55050 31.731 208 88 10 196 362 165 359 2.91e-16 80.1
MS.gene054423.t1 AT3G55050 31.731 208 88 10 196 362 165 359 2.91e-16 80.1
MS.gene054423.t1 AT1G22280 34.270 178 92 8 183 359 125 278 3.77e-16 78.6
MS.gene054423.t1 AT1G22280 34.270 178 92 8 183 359 131 284 3.77e-16 78.6
MS.gene054423.t1 AT1G48040 29.617 287 150 12 91 369 116 358 4.12e-16 79.3
MS.gene054423.t1 AT5G51760 38.000 150 76 4 171 320 189 321 5.80e-16 79.0
MS.gene054423.t1 AT5G51760 38.000 150 76 4 171 320 219 351 6.79e-16 79.0
MS.gene054423.t1 AT1G67820 28.521 284 153 11 49 332 75 308 7.69e-16 79.0
MS.gene054423.t1 AT3G17250 25.000 292 162 10 89 369 156 401 8.46e-16 79.0
MS.gene054423.t1 AT1G67820 28.938 273 144 11 49 321 111 333 1.23e-15 78.6
MS.gene054423.t1 AT3G51470 25.217 345 174 13 50 372 12 294 1.30e-15 77.4
MS.gene054423.t1 AT3G51470 25.217 345 174 13 50 372 56 338 1.87e-15 77.4
MS.gene054423.t1 AT1G72770 30.677 251 111 10 91 320 238 446 2.36e-15 77.8
MS.gene054423.t1 AT1G72770 30.677 251 111 10 91 320 238 446 2.36e-15 77.8
MS.gene054423.t1 AT1G72770 30.677 251 111 10 91 320 238 446 2.36e-15 77.8
MS.gene054423.t1 AT1G47380 32.653 196 109 9 182 372 127 304 2.94e-15 77.4
MS.gene054423.t1 AT2G30020 26.537 309 161 13 62 361 141 392 3.72e-15 76.6
MS.gene054423.t1 AT2G33700 27.869 305 141 12 39 320 58 306 6.39e-15 75.9
MS.gene054423.t1 AT1G07160 27.184 309 160 13 62 361 124 376 1.61e-14 74.7
MS.gene054423.t1 AT2G40860 28.440 218 128 8 158 369 363 558 1.83e-14 75.1
MS.gene054423.t1 AT2G40860 28.440 218 128 8 158 369 461 656 2.15e-14 75.1
MS.gene054423.t1 AT1G18030 25.338 296 166 9 61 339 75 332 4.32e-14 73.2
MS.gene054423.t1 AT1G17550 27.572 243 128 6 91 319 237 445 8.15e-14 73.2
MS.gene054423.t1 AT1G17550 27.572 243 128 6 91 319 237 445 8.15e-14 73.2
MS.gene054423.t1 AT5G66080 29.902 204 95 9 196 361 59 252 1.23e-13 71.2
MS.gene054423.t1 AT5G66080 29.902 204 95 9 196 361 163 356 2.00e-13 71.6
MS.gene054423.t1 AT2G34740 33.113 151 83 8 182 330 191 325 2.53e-13 70.5
MS.gene054423.t1 AT2G34740 33.113 151 83 8 182 330 173 307 2.76e-13 70.5
MS.gene054423.t1 AT2G25070 27.237 257 140 9 91 321 52 287 4.09e-13 70.5
MS.gene054423.t1 AT2G25070 27.237 257 140 9 91 321 52 287 4.09e-13 70.5
MS.gene054423.t1 AT4G31860 26.744 258 140 9 91 321 52 287 4.13e-13 70.5
MS.gene054423.t1 AT4G31860 26.744 258 140 9 91 321 52 287 4.66e-13 69.7
MS.gene054423.t1 AT1G18030 25.379 264 146 8 61 311 75 300 4.87e-13 69.7
MS.gene054423.t1 AT3G12620 31.373 204 92 9 196 361 164 357 5.46e-13 70.1
MS.gene054423.t1 AT3G12620 31.373 204 92 9 196 361 164 357 5.46e-13 70.1
MS.gene054423.t1 AT4G28400 36.154 130 65 7 183 311 127 239 6.52e-13 68.6
MS.gene054423.t1 AT5G02760 28.230 209 94 8 196 363 153 346 1.04e-12 69.3
MS.gene054423.t1 AT4G38520 30.244 205 93 10 196 361 162 355 1.07e-12 69.3
MS.gene054423.t1 AT4G38520 30.244 205 93 10 196 361 162 355 1.07e-12 69.3
MS.gene054423.t1 AT2G40860 28.415 183 110 6 158 334 461 628 2.36e-12 68.9
MS.gene054423.t1 AT5G06750 28.141 199 110 7 195 361 162 359 2.94e-11 64.7
MS.gene054423.t1 AT5G06750 28.141 199 110 7 195 361 162 359 2.94e-11 64.7
MS.gene054423.t1 AT5G06750 29.808 208 95 10 195 361 80 277 4.25e-11 63.9

Find 74 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTAAATTATAGGAATT+TGG 0.150752 7.4:+4206289 MS.gene054423:intron
GATTATTGTATTAAAGATTA+TGG 0.199525 7.4:+4207405 MS.gene054423:CDS
CTTGCCATGTCAAGGGCTTT+TGG 0.208056 7.4:+4207381 MS.gene054423:CDS
AGTTCCTTTCTGACCTCTTT+TGG 0.209433 7.4:-4205945 None:intergenic
CATTGACTCTCTTACTCTTT+TGG 0.217341 7.4:-4206377 None:intergenic
AAGTACTAACGAGGTAAATT+TGG 0.252923 7.4:-4207184 None:intergenic
ATACAATGTCTACTGCTTCT+TGG 0.291789 7.4:-4208032 None:intergenic
AGCAACAAAGATTCAATATA+TGG 0.299537 7.4:+4206506 MS.gene054423:CDS
ATCCTCTATGTTCAATGGTT+TGG 0.312680 7.4:+4205763 MS.gene054423:CDS
GTCTATTTAACAGTTTCAAT+TGG 0.327269 7.4:-4208204 None:intergenic
TCTGGCACTATTAATGTTGA+TGG 0.338334 7.4:+4205896 MS.gene054423:CDS
GCTATCTTGCTCAGGGGAAA+TGG 0.343840 7.4:-4208181 None:intergenic
CATTTATCCTCTATGTTCAA+TGG 0.363846 7.4:+4205758 MS.gene054423:CDS
ATATTCCTCTGAGTTACTTC+AGG 0.378333 7.4:-4207441 None:intergenic
ATCAGACGATGATGGAAGTT+TGG 0.397912 7.4:+4207132 MS.gene054423:CDS
CAAGGTCTTTGCTATGCAAT+TGG 0.407044 7.4:+4206401 MS.gene054423:CDS
TTTGTTGTGCTTGCCACTGA+TGG 0.408199 7.4:+4207480 MS.gene054423:CDS
TCAATTGGGCTATCTTGCTC+AGG 0.413365 7.4:-4208189 None:intergenic
CTATCTTGCTCAGGGGAAAT+GGG 0.431506 7.4:-4208180 None:intergenic
TGGCGACTCTCGTGCAGTAC+TGG 0.436747 7.4:+4207102 MS.gene054423:CDS
TCTATTTAACAGTTTCAATT+GGG 0.444557 7.4:-4208203 None:intergenic
GCCCTTGACATGGCAAGTCC+TGG 0.445151 7.4:-4207375 None:intergenic
AGCAAAATCAGCTAAACGTT+TGG 0.451570 7.4:+4208071 MS.gene054423:CDS
TATTTGATGGACATGGGCCA+TGG 0.461413 7.4:+4206341 MS.gene054423:CDS
ATGCTCAAGTTCTTGATCAA+TGG 0.462238 7.4:-4206557 None:intergenic
AATGTCTACTGCTTCTTGGT+TGG 0.470931 7.4:-4208028 None:intergenic
TTGTTGTGCTTGCCACTGAT+GGG 0.475803 7.4:+4207481 MS.gene054423:CDS
TGCCCTCTCAATTGTTAGAC+AGG 0.479242 7.4:+4206615 MS.gene054423:CDS
CAGTGGCAAGCACAACAAAC+TGG 0.480296 7.4:-4207476 None:intergenic
AACCAGGAGTGCATAGGGTC+TGG 0.482895 7.4:+4207334 MS.gene054423:CDS
AACCAGACCCTATGCACTCC+TGG 0.483257 7.4:-4207336 None:intergenic
CGCAAAATATCATGTCCTCT+TGG 0.484795 7.4:-4206315 None:intergenic
TGCGGTATATTTGATGGACA+TGG 0.485213 7.4:+4206334 MS.gene054423:CDS
ATCAAGATTGTTGCATAGTG+TGG 0.493460 7.4:+4205969 MS.gene054423:CDS
AATAGCAGAAATATCATCAA+TGG 0.495485 7.4:-4208139 None:intergenic
CTCCAGGACTTGCCATGTCA+AGG 0.496930 7.4:+4207373 MS.gene054423:CDS
TTCTCCAAAAGAGGTCAGAA+AGG 0.500364 7.4:+4205941 MS.gene054423:CDS
ATTTGATGGACATGGGCCAT+GGG 0.504758 7.4:+4206342 MS.gene054423:CDS
AGTCCTGGAGACTCTACATC+TGG 0.508363 7.4:-4207360 None:intergenic
TGATGAACCAGGAGTGCATA+GGG 0.509549 7.4:+4207329 MS.gene054423:CDS
TTACCAGATGTAGAGTCTCC+AGG 0.526827 7.4:+4207357 MS.gene054423:CDS
ATCACTTGATGATCATGTAA+AGG 0.527386 7.4:+4206450 MS.gene054423:CDS
TGCATGGAAACGCAAGAGAA+GGG 0.527483 7.4:+4208110 MS.gene054423:CDS
GAGAGAATAATTCAGTGTCA+AGG 0.530299 7.4:+4207288 MS.gene054423:CDS
CAATTGGGCTATCTTGCTCA+GGG 0.538157 7.4:-4208188 None:intergenic
GAGAGAAGCTGTTGAAGCAA+TGG 0.555010 7.4:+4205835 MS.gene054423:CDS
TCCAGGACTTGCCATGTCAA+GGG 0.561968 7.4:+4207374 MS.gene054423:CDS
ATGCATGGAAACGCAAGAGA+AGG 0.563663 7.4:+4208109 MS.gene054423:CDS
GCTACGACATCAGACGATGA+TGG 0.564719 7.4:+4207124 MS.gene054423:CDS
TACCTGTCTAACAATTGAGA+GGG 0.565339 7.4:-4206617 None:intergenic
GCGGTATATTTGATGGACAT+GGG 0.566355 7.4:+4206335 MS.gene054423:CDS
AAAATCAGCTAAACGTTTGG+TGG 0.569397 7.4:+4208074 MS.gene054423:CDS
TGCCAAACCATTGAACATAG+AGG 0.573400 7.4:-4205765 None:intergenic
TCAAGATTGTTGCATAGTGT+GGG 0.575353 7.4:+4205970 MS.gene054423:CDS
CAATTGCATAGCAAAGACCT+TGG 0.578108 7.4:-4206400 None:intergenic
GAAATTCTGTGAGATGTGAA+AGG 0.584077 7.4:+4205813 MS.gene054423:CDS
CTTGCTCAGGGGAAATGGGA+GGG 0.592417 7.4:-4208176 None:intergenic
AGAGAATAATTCAGTGTCAA+GGG 0.594886 7.4:+4207289 MS.gene054423:CDS
TCTTGCTCAGGGGAAATGGG+AGG 0.601493 7.4:-4208177 None:intergenic
TGTTGTGCTTGCCACTGATG+GGG 0.603053 7.4:+4207482 MS.gene054423:CDS
TTACCTGTCTAACAATTGAG+AGG 0.603400 7.4:-4206618 None:intergenic
TTGGCTACAAAGTGACCCCA+TGG 0.606377 7.4:-4206358 None:intergenic
GAGTAAGAGAGTCAATGCCA+AGG 0.613440 7.4:+4206383 MS.gene054423:CDS
ATGATGAACCAGGAGTGCAT+AGG 0.615902 7.4:+4207328 MS.gene054423:CDS
ATCTCCAAAAGCCCTTGACA+TGG 0.615912 7.4:-4207385 None:intergenic
TGGAATGTGCAGTACATGCA+TGG 0.626814 7.4:+4208094 MS.gene054423:CDS
AGATTGTTGCATAGTGTGGG+AGG 0.647216 7.4:+4205973 MS.gene054423:CDS
GCATGGAAACGCAAGAGAAG+GGG 0.652422 7.4:+4208111 MS.gene054423:CDS
TTCTGTTTAAATGATGAACC+AGG 0.665974 7.4:+4207318 MS.gene054423:CDS
CAAGATACTTACCCCATCAG+TGG 0.666268 7.4:-4207493 None:intergenic
ATAGGAATTTGGATGCCAAG+AGG 0.678718 7.4:+4206300 MS.gene054423:intron
TTTGATGGACATGGGCCATG+GGG 0.681042 7.4:+4206343 MS.gene054423:CDS
AATTGGGCTATCTTGCTCAG+GGG 0.712499 7.4:-4208187 None:intergenic
CAGTACCTGAAGTAACTCAG+AGG 0.714319 7.4:+4207436 MS.gene054423:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGAGATTAAATATGT+TGG + chr7.4:4207676-4207695 MS.gene054423:intron 15.0%
!! ACAAATAAATAAATAATCAC+CGG + chr7.4:4207836-4207855 MS.gene054423:intron 15.0%
!! ATGATTAAATTATAGGAATT+TGG + chr7.4:4206289-4206308 MS.gene054423:intron 15.0%
!! GATTATTGTATTAAAGATTA+TGG + chr7.4:4207405-4207424 MS.gene054423:CDS 15.0%
!! TATATCAAAGACAAATAAAA+TGG - chr7.4:4206218-4206237 None:intergenic 15.0%
!!! AGTTAATTATGTTTTTAGTT+TGG - chr7.4:4207930-4207949 None:intergenic 15.0%
!!! TCTATTGATGATTAAATTAT+AGG + chr7.4:4206282-4206301 MS.gene054423:intron 15.0%
!!! TTATCTATTTATTTGTTATC+TGG - chr7.4:4207776-4207795 None:intergenic 15.0%
!! TAAAATGGTTGATCTTAAAT+AGG - chr7.4:4206203-4206222 None:intergenic 20.0%
!! TAATTTAATCATCAATAGAC+AGG - chr7.4:4206281-4206300 None:intergenic 20.0%
!! TTAAATTTATTGCTGAAATG+TGG + chr7.4:4207951-4207970 MS.gene054423:intron 20.0%
!! TTTGATATAGAATTCAATTC+TGG + chr7.4:4206229-4206248 MS.gene054423:intron 20.0%
!!! TTATTTTATAATGGTTTGCA+GGG + chr7.4:4207055-4207074 MS.gene054423:intron 20.0%
!!! TTTATTTTATAATGGTTTGC+AGG + chr7.4:4207054-4207073 MS.gene054423:intron 20.0%
! AATAGCAGAAATATCATCAA+TGG - chr7.4:4208142-4208161 None:intergenic 25.0%
! AGCAACAAAGATTCAATATA+TGG + chr7.4:4206506-4206525 MS.gene054423:CDS 25.0%
! ATTTGTTCATGTTACAAGTT+TGG - chr7.4:4206905-4206924 None:intergenic 25.0%
! TCTGCTAACTAGTATATATA+CGG - chr7.4:4206700-4206719 None:intergenic 25.0%
! TGAGACATTTAGATTATGAT+TGG + chr7.4:4207734-4207753 MS.gene054423:intron 25.0%
!! AATCACAGTAACTAGTTTAT+AGG - chr7.4:4207520-4207539 None:intergenic 25.0%
!! AGATCATTTTCACTAAAGAA+AGG + chr7.4:4205788-4205807 MS.gene054423:CDS 25.0%
!! ATATTTTGCGGTATATTTGA+TGG + chr7.4:4206328-4206347 MS.gene054423:CDS 25.0%
!! GAGTTTATTGTTGTCAATTT+TGG - chr7.4:4207640-4207659 None:intergenic 25.0%
!!! AATAAATAGAAGTACTAACG+AGG - chr7.4:4207196-4207215 None:intergenic 25.0%
!!! TATTTTATAATGGTTTGCAG+GGG + chr7.4:4207056-4207075 MS.gene054423:intron 25.0%
AACAATATAGTTGCGATGTT+AGG + chr7.4:4206729-4206748 MS.gene054423:intron 30.0%
AAGTACTAACGAGGTAAATT+TGG - chr7.4:4207187-4207206 None:intergenic 30.0%
ACAATATAGTTGCGATGTTA+GGG + chr7.4:4206730-4206749 MS.gene054423:intron 30.0%
AGAGAATAATTCAGTGTCAA+GGG + chr7.4:4207289-4207308 MS.gene054423:CDS 30.0%
CATTTATCCTCTATGTTCAA+TGG + chr7.4:4205758-4205777 MS.gene054423:CDS 30.0%
GATATAGAATTCAATTCTGG+TGG + chr7.4:4206232-4206251 MS.gene054423:intron 30.0%
GTAATCCAATTCCATCAAAT+AGG - chr7.4:4206802-4206821 None:intergenic 30.0%
GTTACAAGTTTGGTAAATGT+AGG - chr7.4:4206895-4206914 None:intergenic 30.0%
TAATTGCATAATTGCAGAAG+AGG + chr7.4:4207263-4207282 MS.gene054423:intron 30.0%
TACATGTTTGTATACACGTT+GGG - chr7.4:4206163-4206182 None:intergenic 30.0%
TTCTGTTTAAATGATGAACC+AGG + chr7.4:4207318-4207337 MS.gene054423:CDS 30.0%
TTGAAGGTTAAACAAACTCA+CGG - chr7.4:4206101-4206120 None:intergenic 30.0%
! AATAAGTGCTGTGATAACAA+TGG + chr7.4:4206769-4206788 MS.gene054423:intron 30.0%
! ATCACTTGATGATCATGTAA+AGG + chr7.4:4206450-4206469 MS.gene054423:CDS 30.0%
!! AACAACTTTTGAGAATTCGT+AGG + chr7.4:4206650-4206669 MS.gene054423:intron 30.0%
!! ACAACTTTTGAGAATTCGTA+GGG + chr7.4:4206651-4206670 MS.gene054423:intron 30.0%
!! ATTTTATAATGGTTTGCAGG+GGG + chr7.4:4207057-4207076 MS.gene054423:intron 30.0%
AAAATCAGCTAAACGTTTGG+TGG + chr7.4:4208074-4208093 MS.gene054423:CDS 35.0%
AAAGCAAGAACTTCACTGAT+TGG - chr7.4:4207015-4207034 None:intergenic 35.0%
AACAATAAACTCTCACACAC+AGG + chr7.4:4207648-4207667 MS.gene054423:intron 35.0%
ACATGAACAAATTGACGACA+TGG + chr7.4:4206913-4206932 MS.gene054423:intron 35.0%
AGCAAAATCAGCTAAACGTT+TGG + chr7.4:4208071-4208090 MS.gene054423:CDS 35.0%
ATACAATGTCTACTGCTTCT+TGG - chr7.4:4208035-4208054 None:intergenic 35.0%
ATATTCCTCTGAGTTACTTC+AGG - chr7.4:4207444-4207463 None:intergenic 35.0%
ATCAAGATTGTTGCATAGTG+TGG + chr7.4:4205969-4205988 MS.gene054423:CDS 35.0%
ATCCTCTATGTTCAATGGTT+TGG + chr7.4:4205763-4205782 MS.gene054423:CDS 35.0%
ATGCTCAAGTTCTTGATCAA+TGG - chr7.4:4206560-4206579 None:intergenic 35.0%
CTCTTGTAGAAATGAAACTC+TGG + chr7.4:4207610-4207629 MS.gene054423:intron 35.0%
GAAATTCTGTGAGATGTGAA+AGG + chr7.4:4205813-4205832 MS.gene054423:CDS 35.0%
GAGAGAATAATTCAGTGTCA+AGG + chr7.4:4207288-4207307 MS.gene054423:CDS 35.0%
GGAGTTACATTAAGTACTTG+TGG + chr7.4:4207972-4207991 MS.gene054423:intron 35.0%
GTACATGTTTGTATACACGT+TGG - chr7.4:4206164-4206183 None:intergenic 35.0%
TACCTGTCTAACAATTGAGA+GGG - chr7.4:4206620-4206639 None:intergenic 35.0%
TCAAGATTGTTGCATAGTGT+GGG + chr7.4:4205970-4205989 MS.gene054423:CDS 35.0%
TCACCGGTCATATTACAATT+CGG + chr7.4:4207852-4207871 MS.gene054423:intron 35.0%
TCATATTACAATTCGGCAGT+TGG + chr7.4:4207859-4207878 MS.gene054423:intron 35.0%
TCTGGCACTATTAATGTTGA+TGG + chr7.4:4205896-4205915 MS.gene054423:CDS 35.0%
TCTGTCCTATTTGATGGAAT+TGG + chr7.4:4206794-4206813 MS.gene054423:intron 35.0%
TTACCTGTCTAACAATTGAG+AGG - chr7.4:4206621-4206640 None:intergenic 35.0%
TTTGACAAGCTACACTTTGA+AGG - chr7.4:4206117-4206136 None:intergenic 35.0%
! AAGTGTAGCTTGTCAAAATC+AGG + chr7.4:4206120-4206139 MS.gene054423:intron 35.0%
! ACGGTTTTCATAGCAAATGT+TGG + chr7.4:4207082-4207101 MS.gene054423:CDS 35.0%
! CAAGAGGACATGATATTTTG+CGG + chr7.4:4206316-4206335 MS.gene054423:CDS 35.0%
!! AAGTTTGACTCGTTTTACAG+TGG + chr7.4:4206586-4206605 MS.gene054423:CDS 35.0%
!! TTAGCTGATTTTGCTTTGTC+TGG - chr7.4:4208066-4208085 None:intergenic 35.0%
!! TTGTTTTGTGATGCAGGTTT+GGG + chr7.4:4207996-4208015 MS.gene054423:intron 35.0%
!! TTTAGTTTGGTTCAACCAGT+TGG - chr7.4:4207917-4207936 None:intergenic 35.0%
!!! CATTGACTCTCTTACTCTTT+TGG - chr7.4:4206380-4206399 None:intergenic 35.0%
!!! TTTGTTTTGTGATGCAGGTT+TGG + chr7.4:4207995-4208014 MS.gene054423:intron 35.0%
AATGTCTACTGCTTCTTGGT+TGG - chr7.4:4208031-4208050 None:intergenic 40.0%
ATAGGAATTTGGATGCCAAG+AGG + chr7.4:4206300-4206319 MS.gene054423:intron 40.0%
ATCGTGATCAAATACCGATC+TGG - chr7.4:4206942-4206961 None:intergenic 40.0%
ATGGCATCTGTCCTATTTGA+TGG + chr7.4:4206788-4206807 MS.gene054423:intron 40.0%
CAATTGCATAGCAAAGACCT+TGG - chr7.4:4206403-4206422 None:intergenic 40.0%
CGCAAAATATCATGTCCTCT+TGG - chr7.4:4206318-4206337 None:intergenic 40.0%
CTGCCGAATTGTAATATGAC+CGG - chr7.4:4207858-4207877 None:intergenic 40.0%
CTTGATTTCGTCAAAACCCT+CGG - chr7.4:4206072-4206091 None:intergenic 40.0%
GGATTAGGAACCAGTCAATT+CGG - chr7.4:4207896-4207915 None:intergenic 40.0%
TGCCAAACCATTGAACATAG+AGG - chr7.4:4205768-4205787 None:intergenic 40.0%
TTCTCCAAAAGAGGTCAGAA+AGG + chr7.4:4205941-4205960 MS.gene054423:CDS 40.0%
TTGGTTCAACCAGTTGGATT+AGG - chr7.4:4207911-4207930 None:intergenic 40.0%
! AGTTCCTTTCTGACCTCTTT+TGG - chr7.4:4205948-4205967 None:intergenic 40.0%
! CAAGAACTTCACTGATTGGT+TGG - chr7.4:4207011-4207030 None:intergenic 40.0%
! CAAGGTCTTTGCTATGCAAT+TGG + chr7.4:4206401-4206420 MS.gene054423:CDS 40.0%
! GACTTGATTTTGTGTAGCTC+TGG + chr7.4:4205878-4205897 MS.gene054423:CDS 40.0%
! GCGGTATATTTGATGGACAT+GGG + chr7.4:4206335-4206354 MS.gene054423:CDS 40.0%
! TGCGGTATATTTGATGGACA+TGG + chr7.4:4206334-4206353 MS.gene054423:CDS 40.0%
!! ACCTCTTTTGGAGAAAACTG+AGG - chr7.4:4205936-4205955 None:intergenic 40.0%
!! ATCAGACGATGATGGAAGTT+TGG + chr7.4:4207132-4207151 MS.gene054423:CDS 40.0%
!!! AGAGCTTGTTTTGAATTCCG+AGG + chr7.4:4206052-4206071 MS.gene054423:intron 40.0%
!!! GAGCTTGTTTTGAATTCCGA+GGG + chr7.4:4206053-4206072 MS.gene054423:intron 40.0%
!!! TGTGGTTTGTTTTGTGATGC+AGG + chr7.4:4207990-4208009 MS.gene054423:intron 40.0%
AATTGGGCTATCTTGCTCAG+GGG - chr7.4:4208190-4208209 None:intergenic 45.0%
AGATTGTTGCATAGTGTGGG+AGG + chr7.4:4205973-4205992 MS.gene054423:CDS 45.0%
ATCTCCAAAAGCCCTTGACA+TGG - chr7.4:4207388-4207407 None:intergenic 45.0%
ATGCATGGAAACGCAAGAGA+AGG + chr7.4:4208109-4208128 MS.gene054423:CDS 45.0%
CAAGATACTTACCCCATCAG+TGG - chr7.4:4207496-4207515 None:intergenic 45.0%
CAATTGGGCTATCTTGCTCA+GGG - chr7.4:4208191-4208210 None:intergenic 45.0%
CAGTACCTGAAGTAACTCAG+AGG + chr7.4:4207436-4207455 MS.gene054423:CDS 45.0%
CGTTGGGTTTGACAGAATCA+CGG - chr7.4:4206147-4206166 None:intergenic 45.0%
CTATCTTGCTCAGGGGAAAT+GGG - chr7.4:4208183-4208202 None:intergenic 45.0%
GAGAGAAGCTGTTGAAGCAA+TGG + chr7.4:4205835-4205854 MS.gene054423:CDS 45.0%
GAGTAAGAGAGTCAATGCCA+AGG + chr7.4:4206383-4206402 MS.gene054423:CDS 45.0%
GTTAACCATCTGCATCATCG+TGG + chr7.4:4206254-4206273 MS.gene054423:intron 45.0%
TCAATTGGGCTATCTTGCTC+AGG - chr7.4:4208192-4208211 None:intergenic 45.0%
TGACGACATGGAATCCAGAT+CGG + chr7.4:4206925-4206944 MS.gene054423:intron 45.0%
TGCATGGAAACGCAAGAGAA+GGG + chr7.4:4208110-4208129 MS.gene054423:CDS 45.0%
TGCCCTCTCAATTGTTAGAC+AGG + chr7.4:4206615-4206634 MS.gene054423:CDS 45.0%
TGGAATGTGCAGTACATGCA+TGG + chr7.4:4208094-4208113 MS.gene054423:CDS 45.0%
TTACCAACTGCCGAATTGAC+TGG + chr7.4:4207883-4207902 MS.gene054423:intron 45.0%
TTACCAGATGTAGAGTCTCC+AGG + chr7.4:4207357-4207376 MS.gene054423:CDS 45.0%
TTGTTGTGCTTGCCACTGAT+GGG + chr7.4:4207481-4207500 MS.gene054423:CDS 45.0%
! ATGATGAACCAGGAGTGCAT+AGG + chr7.4:4207328-4207347 MS.gene054423:CDS 45.0%
! ATTTGATGGACATGGGCCAT+GGG + chr7.4:4206342-4206361 MS.gene054423:CDS 45.0%
! GCCTCAGTTTTCTCCAAAAG+AGG + chr7.4:4205932-4205951 MS.gene054423:CDS 45.0%
! TAATGGTTTGCAGGGGGAAA+CGG + chr7.4:4207063-4207082 MS.gene054423:intron 45.0%
! TATTTGATGGACATGGGCCA+TGG + chr7.4:4206341-4206360 MS.gene054423:CDS 45.0%
! TGACTGGTTCCTAATCCAAC+TGG + chr7.4:4207899-4207918 MS.gene054423:intron 45.0%
! TGATGAACCAGGAGTGCATA+GGG + chr7.4:4207329-4207348 MS.gene054423:CDS 45.0%
! TTTGTTGTGCTTGCCACTGA+TGG + chr7.4:4207480-4207499 MS.gene054423:CDS 45.0%
!! CGAGGGTTTTGACGAAATCA+AGG + chr7.4:4206070-4206089 MS.gene054423:intron 45.0%
!! TCATTTATAATTATATAAAT+TGG + chr7.4:4207225-4207244 MS.gene054423:intron 5.0%
!!! TTAGTTAATTTATTTTATAA+TGG + chr7.4:4207046-4207065 MS.gene054423:intron 5.0%
AGTCCTGGAGACTCTACATC+TGG - chr7.4:4207363-4207382 None:intergenic 50.0%
CAGTGGCAAGCACAACAAAC+TGG - chr7.4:4207479-4207498 None:intergenic 50.0%
GAACCAGTCAATTCGGCAGT+TGG - chr7.4:4207889-4207908 None:intergenic 50.0%
GCATGGAAACGCAAGAGAAG+GGG + chr7.4:4208111-4208130 MS.gene054423:CDS 50.0%
GCTACGACATCAGACGATGA+TGG + chr7.4:4207124-4207143 MS.gene054423:CDS 50.0%
GCTATCTTGCTCAGGGGAAA+TGG - chr7.4:4208184-4208203 None:intergenic 50.0%
TCCAGGACTTGCCATGTCAA+GGG + chr7.4:4207374-4207393 MS.gene054423:CDS 50.0%
TGTTGTGCTTGCCACTGATG+GGG + chr7.4:4207482-4207501 MS.gene054423:CDS 50.0%
TTGGCTACAAAGTGACCCCA+TGG - chr7.4:4206361-4206380 None:intergenic 50.0%
! CTTGCCATGTCAAGGGCTTT+TGG + chr7.4:4207381-4207400 MS.gene054423:CDS 50.0%
! TTTGATGGACATGGGCCATG+GGG + chr7.4:4206343-4206362 MS.gene054423:CDS 50.0%
AACCAGACCCTATGCACTCC+TGG - chr7.4:4207339-4207358 None:intergenic 55.0%
CAGGACCACGATGATGCAGA+TGG - chr7.4:4206262-4206281 None:intergenic 55.0%
CTCCAGGACTTGCCATGTCA+AGG + chr7.4:4207373-4207392 MS.gene054423:CDS 55.0%
CTTGCTCAGGGGAAATGGGA+GGG - chr7.4:4208179-4208198 None:intergenic 55.0%
TCTTGCTCAGGGGAAATGGG+AGG - chr7.4:4208180-4208199 None:intergenic 55.0%
! AACCAGGAGTGCATAGGGTC+TGG + chr7.4:4207334-4207353 MS.gene054423:CDS 55.0%
GCCCTTGACATGGCAAGTCC+TGG - chr7.4:4207378-4207397 None:intergenic 60.0%
TGGCGACTCTCGTGCAGTAC+TGG + chr7.4:4207102-4207121 MS.gene054423:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 4205752 4208224 4205752 ID=MS.gene054423
chr7.4 mRNA 4205752 4208224 4205752 ID=MS.gene054423.t1;Parent=MS.gene054423
chr7.4 exon 4205752 4205994 4205752 ID=MS.gene054423.t1.exon1;Parent=MS.gene054423.t1
chr7.4 CDS 4205752 4205994 4205752 ID=cds.MS.gene054423.t1;Parent=MS.gene054423.t1
chr7.4 exon 4206304 4206636 4206304 ID=MS.gene054423.t1.exon2;Parent=MS.gene054423.t1
chr7.4 CDS 4206304 4206636 4206304 ID=cds.MS.gene054423.t1;Parent=MS.gene054423.t1
chr7.4 exon 4207076 4207196 4207076 ID=MS.gene054423.t1.exon3;Parent=MS.gene054423.t1
chr7.4 CDS 4207076 4207196 4207076 ID=cds.MS.gene054423.t1;Parent=MS.gene054423.t1
chr7.4 exon 4207280 4207503 4207280 ID=MS.gene054423.t1.exon4;Parent=MS.gene054423.t1
chr7.4 CDS 4207280 4207503 4207280 ID=cds.MS.gene054423.t1;Parent=MS.gene054423.t1
chr7.4 exon 4208012 4208224 4208012 ID=MS.gene054423.t1.exon5;Parent=MS.gene054423.t1
chr7.4 CDS 4208012 4208224 4208012 ID=cds.MS.gene054423.t1;Parent=MS.gene054423.t1
Gene Sequence

>MS.gene054423

ATGGGGCATTTATCCTCTATGTTCAATGGTTTGGCAAGATCATTTTCACTAAAGAAAGGAAGAAATTCTGTGAGATGTGAAAGGAGAGAAGCTGTTGAAGCAATGGCAAAAGAAGCTAAGAAAAATGACTTGATTTTGTGTAGCTCTGGCACTATTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGTCAGAAAGGAACTAATCAAGATTGTTGCATAGTGTGGGAGGTATGCACAAAAATTAAATACTATAATCAAAATACAGCTTTTTTTGTTATTGTTTTAAGAGCTTGTTTTGAATTCCGAGGGTTTTGACGAAATCAAGGTGACACCGTGAGTTTGTTTAACCTTCAAAGTGTAGCTTGTCAAAATCAGGACCGTGATTCTGTCAAACCCAACGTGTATACAAACATGTACTTGTTACATTTTTAGTCCTATTTAAGATCAACCATTTTATTTGTCTTTGATATAGAATTCAATTCTGGTGGTTAACCATCTGCATCATCGTGGTCCTGTCTATTGATGATTAAATTATAGGAATTTGGATGCCAAGAGGACATGATATTTTGCGGTATATTTGATGGACATGGGCCATGGGGTCACTTTGTAGCCAAAAGAGTAAGAGAGTCAATGCCAAGGTCTTTGCTATGCAATTGGCAAGAGACACTTGCTGCACAATCTTCATCACTTGATGATCATGTAAAGGATATTGATCATGTTAAGACAGCTGCAGACAACAAGCAACAAAGATTCAATATATGGAAGCACTCTTTCTTGAAGAGTTGTGCTTCCATTGATCAAGAACTTGAGCATTGTCGAAAGTTTGACTCGTTTTACAGTGGAACAACTGCCCTCTCAATTGTTAGACAGGTAAATACATAGAAACAACTTTTGAGAATTCGTAGGGAGAAATTCATTAAAAACAAAGTGCCGTATATATACTAGTTAGCAGATATTTAAATAACAATATAGTTGCGATGTTAGGGTTTTTTATGTCTTTGAAATAAGTGCTGTGATAACAATGGCATCTGTCCTATTTGATGGAATTGGATTACATGCAGTCACACATTTATGTTTTTAACAATCTCAATCATTGATTTTGTTCATACGACTCATATGATAAGACCTACATTTACCAAACTTGTAACATGAACAAATTGACGACATGGAATCCAGATCGGTATTTGATCACGATTTTCTATAATATGAAAAATCGCGACATGACAATGATTATAAATAGACCAACCAATCAGTGAAGTTCTTGCTTTGAAACTTTATCTTAGTTAATTTATTTTATAATGGTTTGCAGGGGGAAACGGTTTTCATAGCAAATGTTGGCGACTCTCGTGCAGTACTGGCTACGACATCAGACGATGATGGAAGTTTGGTAGCAGTACAACTAACAGTTGATTTCAAGCCAAATTTACCTCGTTAGTACTTCTATTTATTCATTCTTTTTCATTTATAATTATATAAATTGGCTTCTCACTATATTATAATTGCATAATTGCAGAAGAGGAAGAGAGAATAATTCAGTGTCAAGGGCGTGTGTTCTGTTTAAATGATGAACCAGGAGTGCATAGGGTCTGGTTACCAGATGTAGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGAGATTATTGTATTAAAGATTATGGTCTTATTTCAGTACCTGAAGTAACTCAGAGGAATATAAGTAGTAAAGACCAGTTTGTTGTGCTTGCCACTGATGGGGTAAGTATCTTGTCCTATAAACTAGTTACTGTGATTGAAATTGATTACAACATCTTACTAGTTAAATTTTTTAGTCACAAAACAAATCTTACTAGTTACATTTAATCTCTTGTAGAAATGAAACTCTGGTATTCCAAAATTGACAACAATAAACTCTCACACACAGGAAGTTAAAATTGAGATTAAATATGTTGGTTTAGTTAAAAACAATGTTGCAAAAACTAAATTAGTGAGACATTTAGATTATGATTGGATTAGTTATGATTGAACCAGATAACAAATAAATAGATAAATTATAGAAATATCATTAAAAAAAGTAAAAGAATAAACAAACAAATAAATAAATAATCACCGGTCATATTACAATTCGGCAGTTGGTTTACCAACTGCCGAATTGACTGGTTCCTAATCCAACTGGTTGAACCAAACTAAAAACATAATTAACTCTTAAATTTATTGCTGAAATGTGGAGTTACATTAAGTACTTGTGGTTTGTTTTGTGATGCAGGTTTGGGATGTGATCTCCAACCAAGAAGCAGTAGACATTGTATCTTCAACACCAGACAAAGCAAAATCAGCTAAACGTTTGGTGGAATGTGCAGTACATGCATGGAAACGCAAGAGAAGGGGTATTGCCATTGATGATATTTCTGCTATTTGTCTCTTTTTGCACCCTCCCATTTCCCCTGAGCAAGATAGCCCAATTGAAACTGTTAAATAG
Protein sequence

>MS.gene054423.t1

MGHLSSMFNGLARSFSLKKGRNSVRCERREAVEAMAKEAKKNDLILCSSGTINVDGSNNFASVFSKRGQKGTNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLAAQSSSLDDHVKDIDHVKTAADNKQQRFNIWKHSFLKSCASIDQELEHCRKFDSFYSGTTALSIVRQGETVFIANVGDSRAVLATTSDDDGSLVAVQLTVDFKPNLPQEEERIIQCQGRVFCLNDEPGVHRVWLPDVESPGLAMSRAFGDYCIKDYGLISVPEVTQRNISSKDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKSAKRLVECAVHAWKRKRRGIAIDDISAICLFLHPPISPEQDSPIETVK