AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054766

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054766.t1 MTR_5g046790 93.839 211 12 1 1 210 1 211 3.85e-146 406
MS.gene054766.t1 MTR_8g066260 77.350 234 51 2 1 233 1 233 8.57e-120 341
MS.gene054766.t1 MTR_4g109830 69.822 169 51 0 1 169 1 169 4.17e-84 250
MS.gene054766.t1 MTR_7g016630 61.878 181 66 2 1 181 1 178 2.45e-72 221
MS.gene054766.t1 MTR_4g109810 42.149 242 118 6 1 226 1 236 4.81e-53 171
MS.gene054766.t1 MTR_8g097090 53.846 169 77 1 1 168 1 169 6.72e-53 171
MS.gene054766.t1 MTR_3g084980 50.000 174 86 1 1 173 1 174 4.00e-50 164
MS.gene054766.t1 MTR_6g015975 48.851 174 88 1 1 174 1 173 4.59e-50 164
MS.gene054766.t1 MTR_7g016600 43.439 221 116 3 1 213 1 220 6.87e-50 163
MS.gene054766.t1 MTR_7g075850 52.071 169 79 2 1 168 1 168 8.05e-50 163
MS.gene054766.t1 MTR_8g033270 45.588 204 107 4 1 203 1 201 9.27e-48 158
MS.gene054766.t1 MTR_7g075870 49.412 170 85 1 1 170 1 169 1.33e-45 151
MS.gene054766.t1 MTR_2g461760 49.333 150 73 1 63 212 1 147 1.39e-45 150
MS.gene054766.t1 MTR_2g461760 49.664 149 72 1 63 211 1 146 1.82e-45 149
MS.gene054766.t1 MTR_7g075870 48.235 170 88 0 1 170 1 170 6.61e-45 149
MS.gene054766.t1 MTR_6g464720 48.276 174 87 2 1 172 1 173 1.56e-44 150
MS.gene054766.t1 MTR_2g009890 44.767 172 93 2 1 172 1 170 4.63e-44 149
MS.gene054766.t1 MTR_8g033220 40.183 219 109 4 1 203 1 213 9.60e-43 144
MS.gene054766.t1 MTR_8g033220 40.183 219 109 4 1 203 1 213 9.87e-43 144
MS.gene054766.t1 MTR_2g017865 43.889 180 94 2 1 177 16 191 1.02e-42 145
MS.gene054766.t1 MTR_3g452380 42.703 185 99 2 1 182 16 196 1.38e-42 144
MS.gene054766.t1 MTR_8g087860 41.111 180 99 2 1 177 17 192 1.55e-39 137
MS.gene054766.t1 MTR_5g031000 42.442 172 96 2 1 172 1 169 8.74e-39 134
MS.gene054766.t1 MTR_5g031000 42.442 172 96 2 1 172 1 169 1.71e-38 134
MS.gene054766.t1 MTR_1g101970 45.614 171 87 3 1 168 1 168 2.30e-38 132
MS.gene054766.t1 MTR_3g005530 38.764 178 108 1 1 178 1 177 3.97e-38 132
MS.gene054766.t1 MTR_4g102530 45.198 177 84 3 1 171 1 170 9.66e-38 131
MS.gene054766.t1 MTR_5g032520 47.429 175 85 5 1 172 1 171 2.38e-37 130
MS.gene054766.t1 MTR_1g038300 38.393 224 115 9 1 210 1 215 2.90e-36 128
MS.gene054766.t1 MTR_4g036050 36.816 201 118 2 1 200 1 193 3.71e-36 127
MS.gene054766.t1 MTR_1g053070 42.051 195 91 5 1 184 1 184 9.25e-35 124
MS.gene054766.t1 MTR_4g036050 40.506 158 93 1 1 157 1 158 2.70e-34 121
MS.gene054766.t1 MTR_5g032150 41.860 172 99 1 1 172 1 171 3.75e-34 122
MS.gene054766.t1 MTR_4g093970 39.267 191 106 3 1 189 27 209 2.96e-33 120
MS.gene054766.t1 MTR_4g036050 41.379 145 84 1 1 144 1 145 1.80e-32 116
MS.gene054766.t1 MTR_3g088615 43.537 147 77 3 1 146 1 142 2.59e-32 116
MS.gene054766.t1 MTR_4g036050 41.667 144 83 1 1 143 1 144 4.27e-32 116
MS.gene054766.t1 MTR_0003s0590 40.217 184 80 4 1 171 1 167 2.98e-31 115
MS.gene054766.t1 MTR_2g461710 79.032 62 13 0 1 62 1 62 2.35e-30 107
MS.gene054766.t1 MTR_3g113030 33.333 243 117 8 1 233 1 208 1.38e-29 110
MS.gene054766.t1 MTR_5g046870 63.158 76 28 0 1 76 1 76 3.40e-29 106
MS.gene054766.t1 MTR_1g029670 38.235 170 95 5 1 169 1 161 3.51e-28 105
MS.gene054766.t1 MTR_5g066180 36.994 173 104 3 1 172 1 169 3.75e-28 107
MS.gene054766.t1 MTR_5g021270 36.872 179 105 4 1 175 1 175 8.59e-27 103
MS.gene054766.t1 MTR_5g021270 35.393 178 107 4 1 174 1 174 5.99e-25 98.6
MS.gene054766.t1 MTR_4g093030 55.556 72 32 0 1 72 1 72 2.19e-22 90.1
MS.gene054766.t1 MTR_5g066960 64.407 59 21 0 1 59 1 59 4.17e-22 86.3
MS.gene054766.t1 MTR_3g102570 55.128 78 35 0 1 78 1 78 8.81e-21 89.4
MS.gene054766.t1 MTR_4g084740 30.526 190 94 3 1 152 1 190 3.51e-19 85.1
MS.gene054766.t1 MTR_3g052920 41.935 93 49 2 2 89 9 101 1.10e-16 76.6
MS.gene054766.t1 MTR_8g051580 46.479 71 35 1 1 68 1 71 1.72e-16 75.1
MS.gene054766.t1 MTR_1g108510 44.928 69 37 1 2 70 9 76 2.57e-16 75.5
MS.gene054766.t1 MTR_2g030740 47.887 71 34 1 2 69 9 79 3.28e-16 75.5
MS.gene054766.t1 MTR_3g030770 44.928 69 37 1 2 70 9 76 3.49e-16 75.1
MS.gene054766.t1 MTR_1g012570 49.296 71 33 1 2 69 9 79 3.85e-16 75.1
MS.gene054766.t1 MTR_3g052870 46.479 71 35 1 2 69 9 79 5.18e-16 74.3
MS.gene054766.t1 MTR_1g105910 46.479 71 35 1 2 69 9 79 5.97e-16 74.7
MS.gene054766.t1 MTR_1g105920 46.479 71 35 1 2 69 9 79 7.16e-16 74.3
MS.gene054766.t1 MTR_8g043650 46.479 71 35 1 2 69 9 79 9.13e-16 74.3
MS.gene054766.t1 MTR_1g041615 68.182 44 14 0 16 59 20 63 1.17e-15 71.6
MS.gene054766.t1 MTR_5g045560 48.571 70 35 1 1 70 8 76 1.73e-15 73.6
MS.gene054766.t1 MTR_2g093190 43.478 69 38 1 2 70 9 76 2.07e-15 73.2
MS.gene054766.t1 MTR_1g077360 47.826 69 35 1 2 70 9 76 2.49e-15 73.2
MS.gene054766.t1 MTR_0121s0100 53.571 56 26 0 2 57 9 64 2.63e-15 70.5
MS.gene054766.t1 MTR_1g108580 45.588 68 36 1 2 69 9 75 3.57e-15 72.4
MS.gene054766.t1 MTR_4g094632 47.541 61 32 0 1 61 1 61 4.22e-15 70.9
MS.gene054766.t1 MTR_2g085280 47.826 69 35 1 2 70 9 76 4.25e-15 72.4
MS.gene054766.t1 MTR_2g085250 47.826 69 35 1 2 70 9 76 4.47e-15 72.4
MS.gene054766.t1 MTR_8g079502 50.877 57 28 0 1 57 1 57 4.48e-15 71.2
MS.gene054766.t1 MTR_1g054265 50.877 57 28 0 1 57 1 57 9.47e-15 70.1
MS.gene054766.t1 MTR_5g055100 48.529 68 34 1 2 69 9 75 1.01e-14 71.2
MS.gene054766.t1 MTR_5g053390 40.860 93 44 2 2 87 9 97 1.01e-14 71.2
MS.gene054766.t1 MTR_1g075600 53.571 56 26 0 2 57 9 64 1.13e-14 71.2
MS.gene054766.t1 MTR_1g047550 50.877 57 28 0 1 57 1 57 1.59e-14 69.7
MS.gene054766.t1 MTR_1g063160 49.123 57 29 0 1 57 1 57 2.03e-14 69.3
MS.gene054766.t1 MTR_1g106070 36.082 97 44 2 2 95 9 90 2.17e-14 69.3
MS.gene054766.t1 MTR_4g108720 43.038 79 44 1 1 78 1 79 2.87e-14 71.2
MS.gene054766.t1 MTR_5g046830 40.741 81 48 0 94 174 22 102 4.27e-14 68.2
MS.gene054766.t1 MTR_8g086290 52.830 53 25 0 2 54 12 64 7.09e-14 67.8
MS.gene054766.t1 MTR_3g080940 31.452 124 76 3 1 120 8 126 9.56e-14 68.2
MS.gene054766.t1 MTR_4g131030 47.368 57 30 0 1 57 1 57 1.32e-13 67.8
MS.gene054766.t1 MTR_2g105290 49.123 57 29 0 1 57 11 67 1.80e-13 66.6
MS.gene054766.t1 MTR_3g030780 42.029 69 39 1 2 70 9 76 3.20e-13 65.1
MS.gene054766.t1 MTR_7g028448 66.667 42 14 0 16 57 26 67 7.72e-13 64.7
MS.gene054766.t1 MTR_4g036915 66.667 42 14 0 16 57 26 67 7.72e-13 64.7
MS.gene054766.t1 MTR_4g094638 42.373 59 34 0 1 59 1 59 1.02e-12 64.7
MS.gene054766.t1 MTR_5g041650 49.057 53 27 0 1 53 38 90 2.62e-12 65.9
MS.gene054766.t1 MTR_0121s0080 33.645 107 59 3 2 108 9 103 2.67e-12 64.7
MS.gene054766.t1 MTR_8g046350 37.500 72 42 1 1 69 1 72 9.49e-12 61.6
MS.gene054766.t1 MTR_5g066990 30.597 134 87 3 59 192 2 129 4.47e-11 60.1
MS.gene054766.t1 MTR_5g066990 31.579 114 77 1 59 172 2 114 4.57e-11 60.1
MS.gene054766.t1 MTR_8g033250 30.519 154 89 3 66 203 4 155 5.69e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054766.t1 AT1G69120 62.753 247 78 3 1 233 1 247 1.82e-102 298
MS.gene054766.t1 AT1G26310 60.887 248 81 5 1 233 1 247 1.07e-98 288
MS.gene054766.t1 AT1G69120 74.860 179 45 0 1 179 1 179 7.31e-97 283
MS.gene054766.t1 AT5G60910 65.385 182 63 0 1 182 1 182 7.53e-86 255
MS.gene054766.t1 AT1G69120 55.676 185 68 3 63 233 1 185 8.10e-60 187
MS.gene054766.t1 AT3G30260 55.921 152 67 0 1 152 1 152 3.08e-54 174
MS.gene054766.t1 AT1G24260 51.176 170 81 1 1 168 1 170 4.13e-51 167
MS.gene054766.t1 AT1G24260 51.462 171 80 2 1 168 1 171 5.16e-50 164
MS.gene054766.t1 AT5G15800 48.851 174 89 0 1 174 1 174 8.37e-49 160
MS.gene054766.t1 AT3G02310 46.277 188 101 0 1 188 1 188 1.14e-48 160
MS.gene054766.t1 AT5G15800 48.851 174 89 0 1 174 1 174 1.68e-48 160
MS.gene054766.t1 AT2G45650 51.786 168 79 2 1 168 1 166 2.48e-48 159
MS.gene054766.t1 AT3G02310 49.704 169 85 0 1 169 1 169 7.50e-48 157
MS.gene054766.t1 AT1G24260 52.500 160 73 2 1 157 1 160 7.62e-48 158
MS.gene054766.t1 AT3G61120 51.124 178 80 3 1 176 1 173 8.48e-47 155
MS.gene054766.t1 AT2G03710 42.857 182 102 2 1 181 1 181 8.79e-47 155
MS.gene054766.t1 AT2G03710 42.857 182 102 2 1 181 1 181 9.96e-47 155
MS.gene054766.t1 AT2G03710 44.509 173 94 2 1 172 1 172 2.86e-46 152
MS.gene054766.t1 AT5G60910 55.000 120 54 0 63 182 1 120 2.35e-43 144
MS.gene054766.t1 AT4G37940 42.775 173 97 2 1 173 1 171 1.46e-42 144
MS.gene054766.t1 AT2G14210 45.652 184 97 2 1 182 1 183 1.60e-42 144
MS.gene054766.t1 AT2G14210 45.652 184 97 2 1 182 1 183 1.74e-42 144
MS.gene054766.t1 AT2G42830 41.489 188 103 2 1 185 16 199 6.04e-40 138
MS.gene054766.t1 AT4G37940 41.520 171 98 2 1 171 1 169 1.24e-39 136
MS.gene054766.t1 AT2G45660 45.977 174 83 4 1 169 1 168 2.24e-39 135
MS.gene054766.t1 AT3G58780 42.373 177 95 2 1 174 16 188 2.38e-39 136
MS.gene054766.t1 AT3G58780 42.373 177 95 2 1 174 22 194 2.63e-39 136
MS.gene054766.t1 AT4G18960 41.530 183 92 3 2 177 18 192 4.18e-39 136
MS.gene054766.t1 AT2G42830 42.632 190 100 4 1 185 16 201 4.43e-39 135
MS.gene054766.t1 AT3G57230 41.860 172 98 2 1 172 1 170 1.18e-38 134
MS.gene054766.t1 AT3G57230 41.860 172 98 2 1 172 1 170 1.18e-38 134
MS.gene054766.t1 AT4G37940 45.455 143 76 2 1 143 1 141 4.74e-38 130
MS.gene054766.t1 AT2G22630 41.143 175 97 2 1 173 1 171 9.92e-38 131
MS.gene054766.t1 AT2G22630 41.143 175 97 2 1 173 1 171 9.92e-38 131
MS.gene054766.t1 AT4G22950 44.382 178 87 4 1 175 1 169 1.33e-37 129
MS.gene054766.t1 AT4G22950 44.382 178 87 4 1 175 1 169 3.17e-37 130
MS.gene054766.t1 AT4G22950 44.382 178 87 4 1 175 1 169 3.17e-37 130
MS.gene054766.t1 AT3G58780 40.678 177 91 2 1 174 16 181 3.33e-37 130
MS.gene054766.t1 AT5G13790 43.678 174 93 3 1 174 1 169 3.54e-37 131
MS.gene054766.t1 AT2G45660 46.296 162 80 3 1 159 1 158 3.65e-37 128
MS.gene054766.t1 AT3G57230 45.139 144 77 2 1 144 1 142 6.18e-37 127
MS.gene054766.t1 AT3G58780 38.384 198 98 2 1 174 16 213 6.61e-37 130
MS.gene054766.t1 AT3G57390 41.799 189 82 6 1 172 1 178 1.68e-36 128
MS.gene054766.t1 AT4G09960 39.674 184 96 3 1 177 2 177 1.83e-36 128
MS.gene054766.t1 AT4G09960 39.674 184 96 3 1 177 1 176 1.86e-36 128
MS.gene054766.t1 AT5G51870 39.429 175 100 3 1 172 1 172 1.90e-36 127
MS.gene054766.t1 AT4G09960 39.674 184 96 3 1 177 11 186 1.98e-36 129
MS.gene054766.t1 AT4G11880 48.148 162 73 4 1 157 1 156 2.74e-36 126
MS.gene054766.t1 AT4G11880 48.148 162 73 4 1 157 1 156 2.74e-36 126
MS.gene054766.t1 AT4G09960 39.674 184 96 3 1 177 27 202 3.78e-36 128
MS.gene054766.t1 AT5G51870 39.106 179 102 4 1 175 1 176 4.25e-36 127
MS.gene054766.t1 AT3G57390 41.799 189 82 6 1 172 1 178 4.99e-36 128
MS.gene054766.t1 AT5G51870 39.106 179 102 4 1 175 11 186 6.55e-36 127
MS.gene054766.t1 AT5G13790 42.529 174 92 3 1 174 1 166 8.33e-36 128
MS.gene054766.t1 AT4G11880 47.399 173 80 4 1 168 1 167 2.57e-35 125
MS.gene054766.t1 AT4G11880 47.399 173 80 4 1 168 1 167 2.57e-35 125
MS.gene054766.t1 AT5G51870 43.333 150 79 3 1 147 1 147 3.94e-35 123
MS.gene054766.t1 AT5G51870 43.333 150 79 3 1 147 24 170 1.50e-34 122
MS.gene054766.t1 AT2G22540 44.379 169 91 3 1 168 1 167 1.86e-34 123
MS.gene054766.t1 AT2G22540 44.379 169 91 3 1 168 1 167 1.86e-34 123
MS.gene054766.t1 AT3G58780 44.595 148 75 2 1 145 16 159 1.95e-34 124
MS.gene054766.t1 AT5G62165 41.212 165 96 1 1 165 1 164 2.93e-34 122
MS.gene054766.t1 AT5G62165 41.212 165 96 1 1 165 1 164 2.93e-34 122
MS.gene054766.t1 AT5G62165 41.212 165 96 1 1 165 1 164 2.93e-34 122
MS.gene054766.t1 AT4G09960 43.333 150 70 3 1 143 1 142 2.09e-33 120
MS.gene054766.t1 AT2G22540 44.379 169 86 3 1 168 1 162 3.16e-33 120
MS.gene054766.t1 AT4G09960 41.463 164 81 3 1 157 96 251 3.23e-33 122
MS.gene054766.t1 AT5G20240 39.130 184 102 5 1 183 1 175 4.30e-33 119
MS.gene054766.t1 AT4G24540 37.981 208 121 6 1 204 1 204 8.61e-33 119
MS.gene054766.t1 AT5G62165 40.764 157 92 1 1 157 1 156 1.89e-32 116
MS.gene054766.t1 AT5G62165 40.764 157 92 1 1 157 1 156 1.89e-32 116
MS.gene054766.t1 AT5G62165 40.764 157 92 1 1 157 1 156 1.89e-32 116
MS.gene054766.t1 AT5G51860 36.313 179 106 2 1 175 1 175 3.06e-32 117
MS.gene054766.t1 AT5G51860 36.994 173 101 2 1 169 1 169 1.09e-31 115
MS.gene054766.t1 AT5G65060 35.359 181 109 2 1 181 1 173 2.00e-31 114
MS.gene054766.t1 AT5G20240 42.282 149 80 3 1 148 1 144 2.94e-31 112
MS.gene054766.t1 AT5G65070 40.212 189 97 5 1 183 1 179 3.12e-31 114
MS.gene054766.t1 AT5G62165 40.541 148 87 1 1 148 1 147 5.77e-31 112
MS.gene054766.t1 AT5G62165 40.541 148 87 1 1 148 1 147 5.77e-31 112
MS.gene054766.t1 AT5G62165 40.541 148 87 1 1 148 1 147 5.77e-31 112
MS.gene054766.t1 AT5G62165 40.541 148 87 1 1 148 1 147 5.77e-31 112
MS.gene054766.t1 AT5G62165 40.541 148 87 1 1 148 1 147 5.77e-31 112
MS.gene054766.t1 AT5G65060 37.209 172 100 3 1 172 1 164 6.12e-31 113
MS.gene054766.t1 AT5G65050 34.921 189 114 4 1 188 1 181 6.90e-31 113
MS.gene054766.t1 AT5G23260 35.263 190 113 3 1 189 1 181 7.55e-31 114
MS.gene054766.t1 AT5G23260 35.789 190 112 3 1 189 17 197 1.45e-30 114
MS.gene054766.t1 AT5G62165 40.127 157 93 1 1 157 1 156 3.98e-30 111
MS.gene054766.t1 AT5G62165 40.127 157 93 1 1 157 1 156 3.98e-30 111
MS.gene054766.t1 AT1G71692 39.779 181 102 1 1 174 1 181 6.06e-30 111
MS.gene054766.t1 AT5G65050 36.047 172 102 3 1 172 1 164 8.04e-30 110
MS.gene054766.t1 AT5G65070 34.762 210 110 4 1 183 1 210 1.41e-29 110
MS.gene054766.t1 AT5G65060 34.807 181 99 4 1 181 1 162 3.45e-29 108
MS.gene054766.t1 AT5G10140 38.365 159 86 3 1 157 1 149 4.25e-29 108
MS.gene054766.t1 AT5G65050 34.392 189 104 4 1 188 1 170 4.65e-29 108
MS.gene054766.t1 AT5G10140 37.158 183 103 3 1 181 1 173 1.73e-28 107
MS.gene054766.t1 AT5G10140 38.506 174 95 3 1 172 1 164 1.91e-28 105
MS.gene054766.t1 AT5G65080 37.736 159 87 3 1 157 8 156 6.49e-28 105
MS.gene054766.t1 AT5G23260 35.789 190 107 4 1 189 17 192 6.98e-28 107
MS.gene054766.t1 AT5G10140 37.931 174 96 3 1 172 1 164 8.21e-28 105
MS.gene054766.t1 AT5G65050 37.179 156 90 3 1 156 1 148 3.36e-27 103
MS.gene054766.t1 AT1G77080 38.286 175 100 3 1 175 1 167 6.46e-27 102
MS.gene054766.t1 AT5G23260 38.667 150 88 2 1 149 1 147 1.27e-26 103
MS.gene054766.t1 AT1G77080 37.791 172 99 3 1 172 1 164 2.75e-26 100
MS.gene054766.t1 AT1G77080 36.628 172 101 2 1 172 1 164 6.16e-26 100
MS.gene054766.t1 AT5G65070 35.294 221 95 7 1 183 1 211 8.87e-26 100
MS.gene054766.t1 AT5G65070 35.000 180 94 3 1 157 1 180 9.76e-26 100
MS.gene054766.t1 AT3G54340 35.593 177 93 6 1 168 1 165 1.62e-25 100
MS.gene054766.t1 AT5G65070 40.940 149 76 4 1 147 1 139 1.26e-24 95.5
MS.gene054766.t1 AT5G65080 35.754 179 106 3 1 179 8 177 1.30e-24 97.1
MS.gene054766.t1 AT1G77080 35.465 172 99 2 1 172 1 160 6.26e-23 92.4
MS.gene054766.t1 AT1G77080 32.642 193 107 3 1 172 1 191 8.94e-23 92.8
MS.gene054766.t1 AT5G62165 56.164 73 31 1 1 73 1 72 2.22e-22 88.6
MS.gene054766.t1 AT1G31140 33.133 166 104 3 1 160 1 165 8.62e-21 87.4
MS.gene054766.t1 AT1G31140 33.533 167 104 3 1 160 1 167 2.25e-20 86.3
MS.gene054766.t1 AT1G22130 31.053 190 93 2 1 152 1 190 9.41e-20 86.7
MS.gene054766.t1 AT1G77080 37.107 159 88 3 1 159 1 147 1.96e-19 82.0
MS.gene054766.t1 AT1G77980 48.718 78 40 0 1 78 1 78 2.65e-18 82.8
MS.gene054766.t1 AT1G77950 47.436 78 41 0 1 78 1 78 9.17e-17 77.4
MS.gene054766.t1 AT1G77950 47.436 78 41 0 1 78 1 78 9.17e-17 77.4
MS.gene054766.t1 AT1G77950 47.436 78 41 0 1 78 1 78 9.17e-17 77.4
MS.gene054766.t1 AT1G77950 47.436 78 41 0 1 78 1 78 9.17e-17 77.4
MS.gene054766.t1 AT2G34440 37.736 106 60 3 1 105 1 101 1.50e-16 75.1
MS.gene054766.t1 AT1G65360 38.462 117 56 4 1 108 6 115 3.23e-16 75.1
MS.gene054766.t1 AT1G18750 41.772 79 45 1 1 78 1 79 3.32e-16 77.0
MS.gene054766.t1 AT1G18750 41.772 79 45 1 1 78 1 79 3.50e-16 77.0
MS.gene054766.t1 AT1G18750 41.772 79 45 1 1 78 1 79 4.30e-16 77.0
MS.gene054766.t1 AT4G37435 43.182 88 48 1 1 88 1 86 4.38e-16 73.9
MS.gene054766.t1 AT1G01530 41.667 84 41 2 1 77 6 88 9.89e-16 74.3
MS.gene054766.t1 AT4G36590 50.769 65 32 0 2 66 7 71 7.75e-15 72.0
MS.gene054766.t1 AT2G24840 45.714 70 37 1 1 70 62 130 3.04e-14 70.5
MS.gene054766.t1 AT5G60440 44.928 69 35 1 2 67 7 75 4.23e-14 70.5
MS.gene054766.t1 AT2G03060 41.772 79 45 1 1 78 1 79 7.88e-14 70.1
MS.gene054766.t1 AT2G03060 41.772 79 45 1 1 78 1 79 7.88e-14 70.1
MS.gene054766.t1 AT2G03060 41.772 79 45 1 1 78 1 79 7.88e-14 70.1
MS.gene054766.t1 AT2G03060 41.772 79 45 1 1 78 1 79 8.81e-14 70.1
MS.gene054766.t1 AT3G66656 45.614 57 31 0 1 57 1 57 7.41e-13 65.1
MS.gene054766.t1 AT1G69540 31.507 146 84 4 1 142 1 134 2.52e-12 65.9
MS.gene054766.t1 AT1G72350 43.478 69 38 1 2 69 43 111 2.53e-12 64.7
MS.gene054766.t1 AT1G69540 52.830 53 25 0 1 53 1 53 3.03e-12 65.5
MS.gene054766.t1 AT3G04100 39.706 68 40 1 2 69 14 80 3.75e-12 63.9
MS.gene054766.t1 AT2G26320 41.463 82 38 1 1 72 17 98 3.86e-12 61.6
MS.gene054766.t1 AT1G47760 35.443 79 50 1 1 79 1 78 5.03e-12 63.2
MS.gene054766.t1 AT4G37940 31.532 111 75 1 63 173 1 110 6.99e-11 59.7

Find 54 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGACATTGAAGCTCTTTA+AGG 0.118825 5.3:-34118424 None:intergenic
TTGATTATCTTCTCTGATAA+TGG 0.219392 5.3:+34115868 MS.gene054766:CDS
CATTTCTGAACTTCAGAAAA+AGG 0.294721 5.3:+34120246 MS.gene054766:CDS
TTGATTATTCAACTGATTCA+TGG 0.302916 5.3:+34115899 MS.gene054766:CDS
GACAGGTTACTTTCTCAAAA+AGG 0.314822 5.3:+34115785 MS.gene054766:CDS
TTTGTAATTCAGGCACTATA+TGG 0.332000 5.3:+34118379 MS.gene054766:intron
CCGCATAGCCATACCTTTCA+TGG 0.344722 5.3:-34117800 None:intergenic
TATTTATTCAGTGGCAATTA+CGG 0.363630 5.3:+34122073 MS.gene054766:intron
CACAAGAATTGGGGAGGAAC+GGG 0.388252 5.3:+34122104 MS.gene054766:CDS
ATTAATAATATAGTGGTTCC+AGG 0.389303 5.3:-34122138 None:intergenic
TGTACGTTATTCAGGAAAAC+TGG 0.392322 5.3:+34118100 MS.gene054766:intron
TTACTACAAAATCCACTTCC+CGG 0.394416 5.3:+34121888 MS.gene054766:CDS
GATGTATCAACCCTGTAGTT+TGG 0.401883 5.3:-34121861 None:intergenic
TATTCAGGAAAACTGGACTA+TGG 0.406161 5.3:+34118107 MS.gene054766:intron
GGTGAGGGAGCACAAGAATT+GGG 0.408222 5.3:+34122094 MS.gene054766:CDS
AAACAGCATGGAGCAGATAC+TGG 0.413144 5.3:+34117773 MS.gene054766:intron
TTCAAGAATTAATAATATAG+TGG 0.414683 5.3:-34122145 None:intergenic
CGGTGAGGGAGCACAAGAAT+TGG 0.414947 5.3:+34122093 MS.gene054766:CDS
ACCCTACCCCATGTTCAAAC+CGG 0.420746 5.3:-34121907 None:intergenic
CACAAGAGGCTGCTTGTCAA+TGG 0.422774 5.3:+34121832 MS.gene054766:CDS
AACTATTATGGGAAGGAGTA+AGG 0.437650 5.3:+34115729 None:intergenic
TTGTAATTCAGGCACTATAT+GGG 0.444407 5.3:+34118380 MS.gene054766:intron
AATATAGTGGTTCCAGGGTC+AGG 0.449271 5.3:-34122132 None:intergenic
TCCACTTCCCGGTTTGAACA+TGG 0.470827 5.3:+34121899 MS.gene054766:CDS
CTAGAGCAGCAGTTAGATAC+TGG 0.477948 5.3:+34118443 MS.gene054766:CDS
AATGGGAGCAGCCAAACTAC+AGG 0.479756 5.3:+34121850 MS.gene054766:CDS
GGAGTAAGGTGCAGCTAAAA+CGG 0.485976 5.3:+34115743 MS.gene054766:CDS
AGGAAATGATACTAATACTC+AGG 0.501066 5.3:+34117836 MS.gene054766:CDS
GGAGAAGGTTGTTGCACAAG+AGG 0.506368 5.3:+34121818 MS.gene054766:CDS
AGAATTGGGGAGGAACGGGC+TGG 0.508159 5.3:+34122108 MS.gene054766:CDS
TTCAGTGGCAATTACGGTGA+GGG 0.511387 5.3:+34122079 MS.gene054766:intron
GAACGGGCTGGACCTGACCC+TGG 0.516728 5.3:+34122120 MS.gene054766:CDS
ACAAGAGGCTGCTTGTCAAT+GGG 0.517963 5.3:+34121833 MS.gene054766:CDS
CCCATGTTCAAACCGGGAAG+TGG 0.518713 5.3:-34121900 None:intergenic
TATGCGGAGAGACTACTTGT+AGG 0.519529 5.3:+34117816 MS.gene054766:CDS
GCACAAGAATTGGGGAGGAA+CGG 0.522070 5.3:+34122103 MS.gene054766:CDS
ATTAAGAATGTGTACTCTGC+GGG 0.530211 5.3:-34118483 None:intergenic
CCACTTCCCGGTTTGAACAT+GGG 0.530849 5.3:+34121900 MS.gene054766:CDS
CACTTCCCGGTTTGAACATG+GGG 0.536584 5.3:+34121901 MS.gene054766:CDS
ATGAAATTAGATAAAGGAGA+AGG 0.537915 5.3:+34121797 MS.gene054766:intron
CCCTACCCCATGTTCAAACC+GGG 0.556961 5.3:-34121906 None:intergenic
CTGGAACGCCATGAAAGGTA+TGG 0.567577 5.3:+34117792 MS.gene054766:CDS
GCAGAATAACATGCTCTCAA+AGG 0.574546 5.3:+34120385 MS.gene054766:CDS
TTAGATAAAGGAGAAGGAGA+AGG 0.578474 5.3:+34121803 MS.gene054766:intron
TAAAATAAACTATTATGGGA+AGG 0.581699 5.3:+34115722 None:intergenic
AGATACTGGAACGCCATGAA+AGG 0.582088 5.3:+34117787 MS.gene054766:CDS
CGACAACAAGATCAATCGAC+AGG 0.587118 5.3:+34115768 MS.gene054766:CDS
GTGAGGGAGCACAAGAATTG+GGG 0.596580 5.3:+34122095 MS.gene054766:CDS
TTAATAATATAGTGGTTCCA+GGG 0.614066 5.3:-34122137 None:intergenic
GAATAACATGCTCTCAAAGG+AGG 0.623531 5.3:+34120388 MS.gene054766:CDS
ATGGGAGCAGCCAAACTACA+GGG 0.654027 5.3:+34121851 MS.gene054766:CDS
ATTCAGTGGCAATTACGGTG+AGG 0.654082 5.3:+34122078 MS.gene054766:intron
CCATGAAAGGTATGGCTATG+CGG 0.669287 5.3:+34117800 MS.gene054766:CDS
AGGGAGCACAAGAATTGGGG+AGG 0.679020 5.3:+34122098 MS.gene054766:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAAAAATAAAAAT+AGG + chr5.3:34119171-34119190 MS.gene054766:intron 0.0%
!! AAAATTAATAATATTTGTGA+TGG - chr5.3:34116566-34116585 None:intergenic 10.0%
!! AATTTACTTAATTTATTATC+GGG + chr5.3:34119282-34119301 MS.gene054766:intron 10.0%
!! ATTATTATAAAAATGTTTGA+TGG - chr5.3:34120127-34120146 None:intergenic 10.0%
!! TGATCAAATTAAAATTATAT+CGG - chr5.3:34118300-34118319 None:intergenic 10.0%
!! TTCAAAAATATACTTTAAAT+AGG + chr5.3:34121661-34121680 MS.gene054766:intron 10.0%
!!! AATAATTATTTTACCATTTA+AGG - chr5.3:34121728-34121747 None:intergenic 10.0%
!!! ATTTGTTTTTTTTTTTTTGA+AGG - chr5.3:34116278-34116297 None:intergenic 10.0%
!!! CAATGATAATTTTTTTTTTA+AGG - chr5.3:34121409-34121428 None:intergenic 10.0%
!!! GATTTATATGTTTTTATTTT+AGG - chr5.3:34119084-34119103 None:intergenic 10.0%
!!! TACTCTATAATATTTAATTT+TGG - chr5.3:34117686-34117705 None:intergenic 10.0%
!!! TATTTTAGGAAAATTATATA+TGG - chr5.3:34121329-34121348 None:intergenic 10.0%
!!! TCACAATTTAATTTTATTTT+AGG - chr5.3:34121343-34121362 None:intergenic 10.0%
!!! TGTTCTAATATATTTTTTTT+TGG + chr5.3:34116740-34116759 MS.gene054766:intron 10.0%
!!! TTGATTTTGATTTTAATTAT+AGG + chr5.3:34119541-34119560 MS.gene054766:intron 10.0%
!!! TTGATTTTGATTTTTTTTAT+TGG + chr5.3:34119489-34119508 MS.gene054766:intron 10.0%
!!! TTTTGAATTTATTTAGTTTT+TGG + chr5.3:34118833-34118852 MS.gene054766:intron 10.0%
!! AAATAAAGAGTTGTTATATA+TGG + chr5.3:34121181-34121200 MS.gene054766:intron 15.0%
!! AATCGTTATTTAATATACTT+CGG + chr5.3:34121632-34121651 MS.gene054766:intron 15.0%
!! ACATAACAAAATTATTGAAA+TGG + chr5.3:34120821-34120840 MS.gene054766:intron 15.0%
!! AGAATAGAACTATAAAATAT+GGG + chr5.3:34121034-34121053 MS.gene054766:intron 15.0%
!! ATAAAAATAGGTTATTAATG+AGG + chr5.3:34119183-34119202 MS.gene054766:intron 15.0%
!! ATAAAAGAATGTTTAAACTA+TGG - chr5.3:34119462-34119481 None:intergenic 15.0%
!! ATTATGCATTAATATAAACT+TGG - chr5.3:34118260-34118279 None:intergenic 15.0%
!! GATTAAAAAAAAGTTATTCT+TGG - chr5.3:34118861-34118880 None:intergenic 15.0%
!! TAAAAGAATGTTTAAACTAT+GGG - chr5.3:34119461-34119480 None:intergenic 15.0%
!! TAAATAAATTCAAAAACTCA+TGG - chr5.3:34118828-34118847 None:intergenic 15.0%
!! TTACAATTTACTTAAATAGT+AGG - chr5.3:34119919-34119938 None:intergenic 15.0%
!! TTTCGTTTAATATATGATTT+AGG - chr5.3:34116963-34116982 None:intergenic 15.0%
!!! AAATATTGTACTCTTTTATA+TGG + chr5.3:34120342-34120361 MS.gene054766:intron 15.0%
!!! AATTAATCTTTTTGTAATTC+AGG + chr5.3:34118369-34118388 MS.gene054766:intron 15.0%
!!! AGGTTAGTTTTTTTTTTTTA+AGG - chr5.3:34116373-34116392 None:intergenic 15.0%
!!! ATAATTTTTAAACAAACGAA+GGG - chr5.3:34116469-34116488 None:intergenic 15.0%
!!! ATGTATGATTTATGAAATTT+TGG - chr5.3:34118925-34118944 None:intergenic 15.0%
!!! ATGTTTTTATTTTAGGAATT+GGG - chr5.3:34119077-34119096 None:intergenic 15.0%
!!! TAAGTTGAATATTTTTTTTC+TGG - chr5.3:34116811-34116830 None:intergenic 15.0%
!!! TATGTTTTTATTTTAGGAAT+TGG - chr5.3:34119078-34119097 None:intergenic 15.0%
!!! TGATATATGATTTTAAATTG+CGG - chr5.3:34117644-34117663 None:intergenic 15.0%
!!! TGGATATATTTTAATGTTTA+AGG - chr5.3:34117867-34117886 None:intergenic 15.0%
!!! TTAAGTTGATTTTTTTTCTT+TGG - chr5.3:34119715-34119734 None:intergenic 15.0%
!!! TTTTTTTAAGGAAGATTAAA+AGG - chr5.3:34116361-34116380 None:intergenic 15.0%
!!! TTTTTTTTTAAGCAAAAGAT+GGG + chr5.3:34116911-34116930 MS.gene054766:intron 15.0%
!!! TTTTTTTTTTAAGCAAAAGA+TGG + chr5.3:34116910-34116929 MS.gene054766:intron 15.0%
!! AACACATAAAGTTTAAACTA+GGG + chr5.3:34118726-34118745 MS.gene054766:intron 20.0%
!! AAGTACTAAGTTAGATTAAA+AGG - chr5.3:34116393-34116412 None:intergenic 20.0%
!! AATCGATGTAAAAAAATTAG+AGG - chr5.3:34121210-34121229 None:intergenic 20.0%
!! AATCTCTCTCTATATATATA+TGG + chr5.3:34119789-34119808 MS.gene054766:intron 20.0%
!! ACATATGCAAATATATAAGA+AGG - chr5.3:34115942-34115961 None:intergenic 20.0%
!! AGAAGAAGAAAAAAAGATTA+TGG + chr5.3:34118234-34118253 MS.gene054766:intron 20.0%
!! AGAGGATAATAATGATATAA+AGG - chr5.3:34118204-34118223 None:intergenic 20.0%
!! AGATTATTTGTAGTAATACA+TGG - chr5.3:34121768-34121787 None:intergenic 20.0%
!! ATCATACTTCTTTAAATAAC+AGG - chr5.3:34120730-34120749 None:intergenic 20.0%
!! ATTATTCAGTTGAAACTTAA+GGG - chr5.3:34117717-34117736 None:intergenic 20.0%
!! CAGAATAGAACTATAAAATA+TGG + chr5.3:34121033-34121052 MS.gene054766:intron 20.0%
!! CATATGCAAATATATAAGAA+GGG - chr5.3:34115941-34115960 None:intergenic 20.0%
!! CTAATGAATAAGACAAAATA+TGG + chr5.3:34121137-34121156 MS.gene054766:intron 20.0%
!! GAAAAAAAATCAACTTAAAG+AGG + chr5.3:34119717-34119736 MS.gene054766:intron 20.0%
!! GAGGATAATAATGATATAAA+GGG - chr5.3:34118203-34118222 None:intergenic 20.0%
!! GTGTCTATATATGTATATAA+AGG - chr5.3:34119830-34119849 None:intergenic 20.0%
!! TAACACATAAAGTTTAAACT+AGG + chr5.3:34118725-34118744 MS.gene054766:intron 20.0%
!! TAATAAAAAAGCGAACAAAT+GGG - chr5.3:34118702-34118721 None:intergenic 20.0%
!! TATTATTCAGTTGAAACTTA+AGG - chr5.3:34117718-34117737 None:intergenic 20.0%
!! TGTGATATGAAATTAGATAA+AGG + chr5.3:34121791-34121810 MS.gene054766:intron 20.0%
!! TTTAAATAACAGGACAAAAT+AGG - chr5.3:34120720-34120739 None:intergenic 20.0%
!!! AAAAATTGTCTATTTTGTGA+AGG + chr5.3:34120846-34120865 MS.gene054766:intron 20.0%
!!! AAAATAACGACATTTTATCA+CGG - chr5.3:34120574-34120593 None:intergenic 20.0%
!!! AACACCAATCAAATAATTTT+AGG + chr5.3:34120502-34120521 MS.gene054766:intron 20.0%
!!! AATTGCAATTTTCTTTTCTT+AGG + chr5.3:34121685-34121704 MS.gene054766:intron 20.0%
!!! ACAAAAATAAAGCTACATTT+TGG + chr5.3:34120166-34120185 MS.gene054766:intron 20.0%
!!! ACTTTGTTTTATTTATTCAG+TGG + chr5.3:34122064-34122083 MS.gene054766:intron 20.0%
!!! AGAATTTGTTCTAACTTAAA+AGG + chr5.3:34116233-34116252 MS.gene054766:intron 20.0%
!!! ATGATTTATGAAATTTTGGA+AGG - chr5.3:34118921-34118940 None:intergenic 20.0%
!!! ATTGATAATAATGCTCTATT+GGG - chr5.3:34117563-34117582 None:intergenic 20.0%
!!! CATAATTTTTAAACAAACGA+AGG - chr5.3:34116470-34116489 None:intergenic 20.0%
!!! TAAGAATCATGAATTTTTTG+TGG - chr5.3:34118951-34118970 None:intergenic 20.0%
!!! TATTGATAATAATGCTCTAT+TGG - chr5.3:34117564-34117583 None:intergenic 20.0%
!!! TGATATTTTACACTTTCATT+AGG + chr5.3:34121957-34121976 MS.gene054766:intron 20.0%
!!! TTTGTTTTTTATTTTGCTCA+TGG + chr5.3:34116097-34116116 MS.gene054766:intron 20.0%
!!! TTTTGTTTTGCTTTTACAAA+GGG - chr5.3:34117026-34117045 None:intergenic 20.0%
!!! TTTTTGCTTTCTATATGTTT+TGG - chr5.3:34117049-34117068 None:intergenic 20.0%
! AAAAACCTCTTGAGAATAAT+TGG + chr5.3:34118014-34118033 MS.gene054766:intron 25.0%
! AAAACAAATCATTCTTCTAG+AGG + chr5.3:34116289-34116308 MS.gene054766:intron 25.0%
! AAATAAAAAAGAGCTAGCAT+AGG - chr5.3:34116063-34116082 None:intergenic 25.0%
! AAATAAAGCCTTGATAAACT+TGG - chr5.3:34120287-34120306 None:intergenic 25.0%
! AAATTCAAAAACTCATGGTA+CGG - chr5.3:34118823-34118842 None:intergenic 25.0%
! AACCACTTAAACTATGTATT+AGG + chr5.3:34121600-34121619 MS.gene054766:intron 25.0%
! AATAACCAATTATTCTCAAG+AGG - chr5.3:34118022-34118041 None:intergenic 25.0%
! AATATCAGATACAATTCCTT+TGG - chr5.3:34117366-34117385 None:intergenic 25.0%
! ACCACTTAAACTATGTATTA+GGG + chr5.3:34121601-34121620 MS.gene054766:intron 25.0%
! ACTTAATTTATTATCGGGTA+TGG + chr5.3:34119287-34119306 MS.gene054766:intron 25.0%
! ATATTATATGGATATGGACA+CGG - chr5.3:34119341-34119360 None:intergenic 25.0%
! ATGAAATTAGATAAAGGAGA+AGG + chr5.3:34121797-34121816 MS.gene054766:intron 25.0%
! ATTATCAATAACTGCTTTAG+TGG + chr5.3:34117574-34117593 MS.gene054766:intron 25.0%
! ATTGTGTCCTATAGATTTAT+GGG + chr5.3:34121300-34121319 MS.gene054766:intron 25.0%
! CAAATGAAGTTATTGAAGTT+TGG - chr5.3:34119050-34119069 None:intergenic 25.0%
! CAAATTACATTCACCTTAAA+TGG + chr5.3:34121712-34121731 MS.gene054766:intron 25.0%
! CAGACCTAAAATTATTTGAT+TGG - chr5.3:34120509-34120528 None:intergenic 25.0%
! CTGATTACAATCTATTATGA+AGG + chr5.3:34120526-34120545 MS.gene054766:intron 25.0%
! CTTAATTTATTATCGGGTAT+GGG + chr5.3:34119288-34119307 MS.gene054766:intron 25.0%
! CTTATTCATTAGAGAGAATA+AGG - chr5.3:34121129-34121148 None:intergenic 25.0%
! CTTGAGAATAATTGGTTATT+GGG + chr5.3:34118022-34118041 MS.gene054766:intron 25.0%
! GGTAACATTTCAATTTCTTT+AGG - chr5.3:34116790-34116809 None:intergenic 25.0%
! GTAATAAAAAAGCGAACAAA+TGG - chr5.3:34118703-34118722 None:intergenic 25.0%
! GTCCATATCCATATAATATT+GGG + chr5.3:34119342-34119361 MS.gene054766:intron 25.0%
! TACCCAATATTATATGGATA+TGG - chr5.3:34119347-34119366 None:intergenic 25.0%
! TATAGTGATAGTTCAACTAT+AGG - chr5.3:34122016-34122035 None:intergenic 25.0%
! TATTTATTCAGTGGCAATTA+CGG + chr5.3:34122073-34122092 MS.gene054766:intron 25.0%
! TCTTGAGAATAATTGGTTAT+TGG + chr5.3:34118021-34118040 MS.gene054766:intron 25.0%
! TGAATAAGACAAAATATGGA+TGG + chr5.3:34121141-34121160 MS.gene054766:intron 25.0%
! TGTCCATATCCATATAATAT+TGG + chr5.3:34119341-34119360 MS.gene054766:intron 25.0%
! TTAATAATATAGTGGTTCCA+GGG - chr5.3:34122140-34122159 None:intergenic 25.0%
! TTATCAATGGAGTATGTTAT+AGG - chr5.3:34120684-34120703 None:intergenic 25.0%
! TTGATTATCTTCTCTGATAA+TGG + chr5.3:34115868-34115887 MS.gene054766:CDS 25.0%
! TTTGACTACCCAATATTATA+TGG - chr5.3:34119353-34119372 None:intergenic 25.0%
!! AAAAAAAGTACAAAGAAGAG+GGG + chr5.3:34116984-34117003 MS.gene054766:intron 25.0%
!! AAATAACGACATTTTATCAC+GGG - chr5.3:34120573-34120592 None:intergenic 25.0%
!! AATAAAACTCCTGACTTTTT+CGG + chr5.3:34121005-34121024 MS.gene054766:intron 25.0%
!! AATTTAATTTCCCAAAATCG+AGG + chr5.3:34119663-34119682 MS.gene054766:intron 25.0%
!! AGAAAAAAAGTACAAAGAAG+AGG + chr5.3:34116982-34117001 MS.gene054766:intron 25.0%
!! ATCATTTGTTAGATAGTGAT+TGG + chr5.3:34121460-34121479 MS.gene054766:intron 25.0%
!! ATTTAATTTCCCAAAATCGA+GGG + chr5.3:34119664-34119683 MS.gene054766:intron 25.0%
!! GAAAAAAAGTACAAAGAAGA+GGG + chr5.3:34116983-34117002 MS.gene054766:intron 25.0%
!! TTATGTTTTCAGTCAAGAAT+GGG - chr5.3:34120807-34120826 None:intergenic 25.0%
!! TTGATTATTCAACTGATTCA+TGG + chr5.3:34115899-34115918 MS.gene054766:CDS 25.0%
!!! AATTTTGGAAGGATTATGTA+TGG - chr5.3:34118910-34118929 None:intergenic 25.0%
!!! AGTTTTAGGAATTGATTCTA+CGG - chr5.3:34117273-34117292 None:intergenic 25.0%
!!! CTTCATTTAATGAGTTTTAG+TGG - chr5.3:34120951-34120970 None:intergenic 25.0%
!!! GTTTTGTTTTGCTTTTACAA+AGG - chr5.3:34117027-34117046 None:intergenic 25.0%
!!! TTTTATTTTGCTCATGGAAA+GGG + chr5.3:34116103-34116122 MS.gene054766:intron 25.0%
!!! TTTTCAGATCTAAAATGTGA+TGG + chr5.3:34116505-34116524 MS.gene054766:intron 25.0%
!!! TTTTTATTTTGCTCATGGAA+AGG + chr5.3:34116102-34116121 MS.gene054766:intron 25.0%
AAATGAAGTTCACTTACACA+GGG + chr5.3:34120963-34120982 MS.gene054766:intron 30.0%
AACAACTAAAGTATGTCTAC+TGG - chr5.3:34121521-34121540 None:intergenic 30.0%
AAGAATGTTTAAACTATGGG+TGG - chr5.3:34119458-34119477 None:intergenic 30.0%
AATAATTGTTAACGAGAGGA+AGG - chr5.3:34116673-34116692 None:intergenic 30.0%
AATATTACCCTGACCATAAA+GGG + chr5.3:34117442-34117461 MS.gene054766:intron 30.0%
AATTAAGAATGTGTACTCTG+CGG - chr5.3:34118487-34118506 None:intergenic 30.0%
AATTCAAAAACTCATGGTAC+GGG - chr5.3:34118822-34118841 None:intergenic 30.0%
ACAACTAAAGTATGTCTACT+GGG - chr5.3:34121520-34121539 None:intergenic 30.0%
ACACATGCAAATGTTTAAGA+GGG - chr5.3:34118325-34118344 None:intergenic 30.0%
AGGAAATGATACTAATACTC+AGG + chr5.3:34117836-34117855 MS.gene054766:CDS 30.0%
AGTATGATGCAATTGTTCTA+AGG + chr5.3:34120742-34120761 MS.gene054766:intron 30.0%
ATCTACAAAGAGAAATGCTA+GGG + chr5.3:34120639-34120658 MS.gene054766:intron 30.0%
ATGATGTGGCTAATTATCAA+TGG - chr5.3:34120697-34120716 None:intergenic 30.0%
CAAGAATGGGAAAATATAAC+AGG - chr5.3:34120794-34120813 None:intergenic 30.0%
CATTGTGTCCTATAGATTTA+TGG + chr5.3:34121299-34121318 MS.gene054766:intron 30.0%
CATTTCTGAACTTCAGAAAA+AGG + chr5.3:34120246-34120265 MS.gene054766:CDS 30.0%
CTTTACATGCTAGAAATTGA+GGG - chr5.3:34117923-34117942 None:intergenic 30.0%
GCAAAAAAAGCAAACTAATG+AGG + chr5.3:34117062-34117081 MS.gene054766:intron 30.0%
GGGAAAATATAACAGGATAT+AGG - chr5.3:34120787-34120806 None:intergenic 30.0%
GGTTATTAATGAGGAATCTT+AGG + chr5.3:34119192-34119211 MS.gene054766:intron 30.0%
GGTTGTTAGAACTAAACAAA+GGG + chr5.3:34120431-34120450 MS.gene054766:intron 30.0%
GTTTGGTATAGTATGTCAAA+TGG + chr5.3:34120096-34120115 MS.gene054766:intron 30.0%
TAAATGAAGTTCACTTACAC+AGG + chr5.3:34120962-34120981 MS.gene054766:intron 30.0%
TAGAAAATTCACCGTTTGTT+GGG + chr5.3:34117244-34117263 MS.gene054766:intron 30.0%
TATTAATGAGGAATCTTAGG+TGG + chr5.3:34119195-34119214 MS.gene054766:intron 30.0%
TCCCTAATACATAGTTTAAG+TGG - chr5.3:34121605-34121624 None:intergenic 30.0%
TCGATGATGTGATAGAAAAA+CGG - chr5.3:34118584-34118603 None:intergenic 30.0%
TCTAAACTCCAAGTTTATCA+AGG + chr5.3:34120276-34120295 MS.gene054766:intron 30.0%
TGACAATAATTGTTAACGAG+AGG - chr5.3:34116677-34116696 None:intergenic 30.0%
TGGTTGTTAGAACTAAACAA+AGG + chr5.3:34120430-34120449 MS.gene054766:intron 30.0%
TTAGAAAATTCACCGTTTGT+TGG + chr5.3:34117243-34117262 MS.gene054766:intron 30.0%
TTCTTGAGTTTCTTCTTTCT+AGG + chr5.3:34117137-34117156 MS.gene054766:intron 30.0%
TTGATAAACTTGGAGTTTAG+AGG - chr5.3:34120277-34120296 None:intergenic 30.0%
TTGTAATTCAGGCACTATAT+GGG + chr5.3:34118380-34118399 MS.gene054766:intron 30.0%
TTGTCGAAGGTCATTATTTA+AGG - chr5.3:34120600-34120619 None:intergenic 30.0%
TTTAAACTAGGGATGTCAAT+GGG + chr5.3:34118737-34118756 MS.gene054766:intron 30.0%
TTTGTAATTCAGGCACTATA+TGG + chr5.3:34118379-34118398 MS.gene054766:intron 30.0%
! AAAAAAGTACAAAGAAGAGG+GGG + chr5.3:34116985-34117004 MS.gene054766:intron 30.0%
! AAGTATATGCTCCAAAGTTT+TGG - chr5.3:34117965-34117984 None:intergenic 30.0%
! AATAACGACATTTTATCACG+GGG - chr5.3:34120572-34120591 None:intergenic 30.0%
! ATTCATGACATGCAAGTTTT+AGG - chr5.3:34117287-34117306 None:intergenic 30.0%
! ATTGTACTCTTTTATATGGC+AGG + chr5.3:34120346-34120365 MS.gene054766:intron 30.0%
! GAACGATGAAATTGTTGATT+TGG - chr5.3:34117198-34117217 None:intergenic 30.0%
! GTTATGTTTTCAGTCAAGAA+TGG - chr5.3:34120808-34120827 None:intergenic 30.0%
! GTTTCATTGATTAAACAGCA+TGG + chr5.3:34117761-34117780 MS.gene054766:intron 30.0%
! TATGTTATAGGAGTGTGTTA+GGG - chr5.3:34120672-34120691 None:intergenic 30.0%
! TCATTGTCATGTTGATTGTT+TGG - chr5.3:34119120-34119139 None:intergenic 30.0%
!! ATAAAACTCCTGACTTTTTC+GGG + chr5.3:34121006-34121025 MS.gene054766:intron 30.0%
!! GTAAGCAACATCACTTTTAA+TGG + chr5.3:34120410-34120429 MS.gene054766:intron 30.0%
!! TTTGCTTTTACAAAGGGTTT+TGG - chr5.3:34117020-34117039 None:intergenic 30.0%
!!! CTTTTTCTGAAGTTCAGAAA+TGG - chr5.3:34120248-34120267 None:intergenic 30.0%
!!! TTTAGCTTTTTTGAGCAAAC+CGG - chr5.3:34115815-34115834 None:intergenic 30.0%
AAAAAGCGAACAAATGGGTA+CGG - chr5.3:34118697-34118716 None:intergenic 35.0%
AACAGAGAGTAATGTGATAG+AGG - chr5.3:34118614-34118633 None:intergenic 35.0%
AAGTGAATCATGAGCTAACA+TGG - chr5.3:34117225-34117244 None:intergenic 35.0%
ACTTTCTCAAAAAGGAGAAC+CGG + chr5.3:34115793-34115812 MS.gene054766:CDS 35.0%
AGATATATAGAGAGAGAGAG+AGG + chr5.3:34116019-34116038 MS.gene054766:intron 35.0%
AGTCATTCTTCTCGAGATAA+GGG - chr5.3:34116440-34116459 None:intergenic 35.0%
ATATTACCCTGACCATAAAG+GGG + chr5.3:34117443-34117462 MS.gene054766:intron 35.0%
ATGGATGCCCATAAATCTAT+AGG - chr5.3:34121310-34121329 None:intergenic 35.0%
ATGTCAAGATGTTCATCAAG+AGG - chr5.3:34117393-34117412 None:intergenic 35.0%
ATTAAGAATGTGTACTCTGC+GGG - chr5.3:34118486-34118505 None:intergenic 35.0%
CAATATTACCCTGACCATAA+AGG + chr5.3:34117441-34117460 MS.gene054766:intron 35.0%
CACACATGCAAATGTTTAAG+AGG - chr5.3:34118326-34118345 None:intergenic 35.0%
CATCTACAAAGAGAAATGCT+AGG + chr5.3:34120638-34120657 MS.gene054766:intron 35.0%
CCTTTACATGCTAGAAATTG+AGG - chr5.3:34117924-34117943 None:intergenic 35.0%
CGGTAAAATTTCCTTCAACA+AGG + chr5.3:34119219-34119238 MS.gene054766:intron 35.0%
CTAGACATTGAAGCTCTTTA+AGG - chr5.3:34118427-34118446 None:intergenic 35.0%
GAGAATTTGAGTGATTTAGC+AGG - chr5.3:34117476-34117495 None:intergenic 35.0%
GTTTAAACTAGGGATGTCAA+TGG + chr5.3:34118736-34118755 MS.gene054766:intron 35.0%
TAGTCATTCTTCTCGAGATA+AGG - chr5.3:34116441-34116460 None:intergenic 35.0%
TATCATACTATTTGTGCCCA+TGG - chr5.3:34118765-34118784 None:intergenic 35.0%
TATTCAGGAAAACTGGACTA+TGG + chr5.3:34118107-34118126 MS.gene054766:intron 35.0%
TCAGATACAATTCCTTTGGA+AGG - chr5.3:34117362-34117381 None:intergenic 35.0%
TGAAGTTGTTACCTTGTTGA+AGG - chr5.3:34119233-34119252 None:intergenic 35.0%
TGTACGTTATTCAGGAAAAC+TGG + chr5.3:34118100-34118119 MS.gene054766:intron 35.0%
TTACTACAAAATCCACTTCC+CGG + chr5.3:34121888-34121907 MS.gene054766:CDS 35.0%
TTAGATAAAGGAGAAGGAGA+AGG + chr5.3:34121803-34121822 MS.gene054766:intron 35.0%
TTCACTGCAATTATGGTCAA+TGG - chr5.3:34116841-34116860 None:intergenic 35.0%
TTGACATACTATACCAAACC+AGG - chr5.3:34120095-34120114 None:intergenic 35.0%
TTGATATTGCGATAAAGTGC+TGG - chr5.3:34116879-34116898 None:intergenic 35.0%
! AAAAAGTACAAAGAAGAGGG+GGG + chr5.3:34116986-34117005 MS.gene054766:intron 35.0%
! AACAAACTTACCCTCGATTT+TGG - chr5.3:34119677-34119696 None:intergenic 35.0%
! ACAAACTTACCCTCGATTTT+GGG - chr5.3:34119676-34119695 None:intergenic 35.0%
! AGAGAAAACAAGGTGTTCAA+TGG - chr5.3:34118555-34118574 None:intergenic 35.0%
! CTTTTATATGGCAGGAGAAA+GGG + chr5.3:34120354-34120373 MS.gene054766:intron 35.0%
! GAATCTTTTGCAGATCATGA+GGG + chr5.3:34116316-34116335 MS.gene054766:intron 35.0%
! GACAGGTTACTTTCTCAAAA+AGG + chr5.3:34115785-34115804 MS.gene054766:CDS 35.0%
! GAGAAAACAAGGTGTTCAAT+GGG - chr5.3:34118554-34118573 None:intergenic 35.0%
! GAGTCAACCTTTTCAATTGT+TGG - chr5.3:34117165-34117184 None:intergenic 35.0%
! GTATGTTATAGGAGTGTGTT+AGG - chr5.3:34120673-34120692 None:intergenic 35.0%
! TCTTTTATATGGCAGGAGAA+AGG + chr5.3:34120353-34120372 MS.gene054766:intron 35.0%
! TGAATCTTTTGCAGATCATG+AGG + chr5.3:34116315-34116334 MS.gene054766:intron 35.0%
! TGTTTCTGCAACCAAAACTT+TGG + chr5.3:34117951-34117970 MS.gene054766:intron 35.0%
!! ATCTGAGCACTGGTATATAA+AGG - chr5.3:34118667-34118686 None:intergenic 35.0%
!! CAGTGTCACTTAGTATCATA+TGG + chr5.3:34118346-34118365 MS.gene054766:intron 35.0%
!! CCTCAATTTCTAGCATGTAA+AGG + chr5.3:34117921-34117940 MS.gene054766:intron 35.0%
!! GTACTATCTGTCTTTTTGAG+AGG + chr5.3:34121076-34121095 MS.gene054766:intron 35.0%
AAGCAAAAGATGGGATGTAG+AGG + chr5.3:34116920-34116939 MS.gene054766:intron 40.0%
AAGCAAACTAATGAGGCGAA+CGG + chr5.3:34117069-34117088 MS.gene054766:intron 40.0%
AATCATGAGCTAACATGGCT+CGG - chr5.3:34117220-34117239 None:intergenic 40.0%
AATGAGGAATCTTAGGTGGA+CGG + chr5.3:34119199-34119218 MS.gene054766:intron 40.0%
ACAATGGAGTTACCTTCCAA+AGG + chr5.3:34117347-34117366 MS.gene054766:intron 40.0%
ACGGAGATAGAGAGAAAACA+AGG - chr5.3:34118565-34118584 None:intergenic 40.0%
ACTCAAGAAGAAGCAACATG+AGG - chr5.3:34117126-34117145 None:intergenic 40.0%
AGCAAAAGATGGGATGTAGA+GGG + chr5.3:34116921-34116940 MS.gene054766:intron 40.0%
CAGCTATGTGTACGTTATTC+AGG + chr5.3:34118092-34118111 MS.gene054766:intron 40.0%
CAGGACAAAATAGGATGATG+TGG - chr5.3:34120711-34120730 None:intergenic 40.0%
CTAGGCACCAACAATTGAAA+AGG + chr5.3:34117155-34117174 MS.gene054766:intron 40.0%
CTGCTTCTTTGTGAGAGAAA+CGG + chr5.3:34120879-34120898 MS.gene054766:intron 40.0%
GAAGTGGTTCACTGCAATTA+TGG - chr5.3:34116848-34116867 None:intergenic 40.0%
GAATAACATGCTCTCAAAGG+AGG + chr5.3:34120388-34120407 MS.gene054766:CDS 40.0%
GATGTATCAACCCTGTAGTT+TGG - chr5.3:34121864-34121883 None:intergenic 40.0%
GCAGAATAACATGCTCTCAA+AGG + chr5.3:34120385-34120404 MS.gene054766:CDS 40.0%
GCTCTATTGGGATTTGTGAA+TGG - chr5.3:34117551-34117570 None:intergenic 40.0%
GGTAAAATTCAGCATGGACA+CGG - chr5.3:34119405-34119424 None:intergenic 40.0%
TAACGTACACATAGCTGCTT+AGG - chr5.3:34118089-34118108 None:intergenic 40.0%
TTCACTTACACAGGGAAGAT+GGG + chr5.3:34120971-34120990 MS.gene054766:intron 40.0%
TTTGGAAGGTAACTCCATTG+TGG - chr5.3:34117348-34117367 None:intergenic 40.0%
! AAAAGTACAAAGAAGAGGGG+GGG + chr5.3:34116987-34117006 MS.gene054766:intron 40.0%
! GAAACGGTTAGAAAAGCACA+CGG + chr5.3:34120895-34120914 MS.gene054766:intron 40.0%
! GAAAGGGCTTTGGTAAATTG+GGG + chr5.3:34116119-34116138 MS.gene054766:intron 40.0%
! GGAAAGGGCTTTGGTAAATT+GGG + chr5.3:34116118-34116137 MS.gene054766:intron 40.0%
! TGGAAAGGGCTTTGGTAAAT+TGG + chr5.3:34116117-34116136 MS.gene054766:intron 40.0%
! TTTTATGCATCCAGACGACA+TGG - chr5.3:34117513-34117532 None:intergenic 40.0%
!! ACGGGGTTGGTTTATTATGA+AGG - chr5.3:34120555-34120574 None:intergenic 40.0%
!! GGGTTGGTTTATTATGAAGG+AGG - chr5.3:34120552-34120571 None:intergenic 40.0%
!! TAGGGCATATCATTGACTCT+GGG + chr5.3:34120067-34120086 MS.gene054766:intron 40.0%
!! TTAGGGCATATCATTGACTC+TGG + chr5.3:34120066-34120085 MS.gene054766:intron 40.0%
AAAAACTCATGGTACGGGAC+GGG - chr5.3:34118817-34118836 None:intergenic 45.0%
AAACAGCATGGAGCAGATAC+TGG + chr5.3:34117773-34117792 MS.gene054766:intron 45.0%
AAGAAGAAGCAACATGAGGC+AGG - chr5.3:34117122-34117141 None:intergenic 45.0%
AATATAGTGGTTCCAGGGTC+AGG - chr5.3:34122135-34122154 None:intergenic 45.0%
ACAAGAGGCTGCTTGTCAAT+GGG + chr5.3:34121833-34121852 MS.gene054766:CDS 45.0%
ACACGGAGTGGGTAGTTAAA+CGG - chr5.3:34119388-34119407 None:intergenic 45.0%
ACAGAACCCCTTTATGGTCA+GGG - chr5.3:34117452-34117471 None:intergenic 45.0%
AGATACTGGAACGCCATGAA+AGG + chr5.3:34117787-34117806 MS.gene054766:CDS 45.0%
ATTCAGTGGCAATTACGGTG+AGG + chr5.3:34122078-34122097 MS.gene054766:intron 45.0%
CAAAAACTCATGGTACGGGA+CGG - chr5.3:34118818-34118837 None:intergenic 45.0%
CACTAGAAGAGCAATACCTG+TGG - chr5.3:34118176-34118195 None:intergenic 45.0%
CGACAACAAGATCAATCGAC+AGG + chr5.3:34115768-34115787 MS.gene054766:CDS 45.0%
CTAGAGCAGCAGTTAGATAC+TGG + chr5.3:34118443-34118462 MS.gene054766:CDS 45.0%
GCAAAAGATGGGATGTAGAG+GGG + chr5.3:34116922-34116941 MS.gene054766:intron 45.0%
GCAGTGAACCACTTCAAATG+AGG + chr5.3:34116853-34116872 MS.gene054766:intron 45.0%
GGAGTAAGGTGCAGCTAAAA+CGG + chr5.3:34115743-34115762 MS.gene054766:CDS 45.0%
GTCTGAGTTTGTCACCACAA+TGG + chr5.3:34117331-34117350 MS.gene054766:intron 45.0%
GTTCACTTACACAGGGAAGA+TGG + chr5.3:34120970-34120989 MS.gene054766:intron 45.0%
TACAGAACCCCTTTATGGTC+AGG - chr5.3:34117453-34117472 None:intergenic 45.0%
TATGCGGAGAGACTACTTGT+AGG + chr5.3:34117816-34117835 MS.gene054766:CDS 45.0%
TCTGTTCACCCGAAAAAGTC+AGG - chr5.3:34121017-34121036 None:intergenic 45.0%
TCTTTGTAGATGTCGCCTGT+GGG - chr5.3:34120630-34120649 None:intergenic 45.0%
TTCAGTGGCAATTACGGTGA+GGG + chr5.3:34122079-34122098 MS.gene054766:intron 45.0%
TTCTACGGAGACCCAACAAA+CGG - chr5.3:34117258-34117277 None:intergenic 45.0%
TTGATTGTACCCATACCCAC+AGG - chr5.3:34119316-34119335 None:intergenic 45.0%
TTTGCTCATGGAAAGGGCTT+TGG + chr5.3:34116109-34116128 MS.gene054766:intron 45.0%
! ACAAGGTGTTCAATGGGTGA+TGG - chr5.3:34118548-34118567 None:intergenic 45.0%
! ACGACATTTTATCACGGGGT+TGG - chr5.3:34120568-34120587 None:intergenic 45.0%
! AGCTTTTGCAGAGAAACCAC+AGG + chr5.3:34118157-34118176 MS.gene054766:CDS 45.0%
! ATAGGAGTGTGTTAGGGAGT+GGG - chr5.3:34120666-34120685 None:intergenic 45.0%
! CCATGAAAGGTATGGCTATG+CGG + chr5.3:34117800-34117819 MS.gene054766:CDS 45.0%
! CCATGCTGAATTTTACCCGT+GGG + chr5.3:34119408-34119427 MS.gene054766:intron 45.0%
! CTTCTTCTGAGAGAGCAAAG+AGG - chr5.3:34118222-34118241 None:intergenic 45.0%
! TATAGGAGTGTGTTAGGGAG+TGG - chr5.3:34120667-34120686 None:intergenic 45.0%
! TCCATGCTGAATTTTACCCG+TGG + chr5.3:34119407-34119426 MS.gene054766:intron 45.0%
!! AGCACACGGTGTTGTAAGTA+TGG + chr5.3:34120909-34120928 MS.gene054766:intron 45.0%
!! TATCATTGACTCTGGGAACC+TGG + chr5.3:34120074-34120093 MS.gene054766:intron 45.0%
!! AAATATATACATATTTAAAA+AGG + chr5.3:34116210-34116229 MS.gene054766:intron 5.0%
!! ATAATTAAGTAATAAATTTA+GGG + chr5.3:34120049-34120068 MS.gene054766:intron 5.0%
!! ATAGAAAATATTATATAATT+TGG + chr5.3:34120197-34120216 MS.gene054766:intron 5.0%
!! ATTTATTTGTTTATAAATTA+TGG - chr5.3:34117887-34117906 None:intergenic 5.0%
!! TAATTTACTTAATTTATTAT+CGG + chr5.3:34119281-34119300 MS.gene054766:intron 5.0%
!! TATAATTAAGTAATAAATTT+AGG + chr5.3:34120048-34120067 MS.gene054766:intron 5.0%
AAACTAATGAGGCGAACGGC+TGG + chr5.3:34117073-34117092 MS.gene054766:intron 50.0%
AATGGGAGCAGCCAAACTAC+AGG + chr5.3:34121850-34121869 MS.gene054766:CDS 50.0%
AATTCAGCATGGACACGGAG+TGG - chr5.3:34119400-34119419 None:intergenic 50.0%
ACAATGCCTACGTGTACCCA+CGG - chr5.3:34119427-34119446 None:intergenic 50.0%
ACCCTACCCCATGTTCAAAC+CGG - chr5.3:34121910-34121929 None:intergenic 50.0%
ACGGGCACGGGTATCATAAA+GGG - chr5.3:34118799-34118818 None:intergenic 50.0%
AGGGATGTCAATGGGTACCA+TGG + chr5.3:34118745-34118764 MS.gene054766:intron 50.0%
ATGGGAGCAGCCAAACTACA+GGG + chr5.3:34121851-34121870 MS.gene054766:CDS 50.0%
ATTCAGCATGGACACGGAGT+GGG - chr5.3:34119399-34119418 None:intergenic 50.0%
CACAAGAATTGGGGAGGAAC+GGG + chr5.3:34122104-34122123 MS.gene054766:CDS 50.0%
CACAAGAGGCTGCTTGTCAA+TGG + chr5.3:34121832-34121851 MS.gene054766:CDS 50.0%
CACGGAGTGGGTAGTTAAAC+GGG - chr5.3:34119387-34119406 None:intergenic 50.0%
CACGGGTATCATAAAGGGAC+GGG - chr5.3:34118794-34118813 None:intergenic 50.0%
CCCACGGGTAAAATTCAGCA+TGG - chr5.3:34119411-34119430 None:intergenic 50.0%
CCGCATAGCCATACCTTTCA+TGG - chr5.3:34117803-34117822 None:intergenic 50.0%
CTCTTTGTAGATGTCGCCTG+TGG - chr5.3:34120631-34120650 None:intergenic 50.0%
CTGGAACGCCATGAAAGGTA+TGG + chr5.3:34117792-34117811 MS.gene054766:CDS 50.0%
GCACAAGAATTGGGGAGGAA+CGG + chr5.3:34122103-34122122 MS.gene054766:CDS 50.0%
GCACGGGTATCATAAAGGGA+CGG - chr5.3:34118795-34118814 None:intergenic 50.0%
GCAGGTACAGAACCCCTTTA+TGG - chr5.3:34117458-34117477 None:intergenic 50.0%
GGAGAAGGTTGTTGCACAAG+AGG + chr5.3:34121818-34121837 MS.gene054766:CDS 50.0%
GGGATGTCAATGGGTACCAT+GGG + chr5.3:34118746-34118765 MS.gene054766:intron 50.0%
GTATCATAAAGGGACGGGCA+CGG - chr5.3:34118789-34118808 None:intergenic 50.0%
GTATGGGTACCTGTGGGTAT+GGG + chr5.3:34119304-34119323 MS.gene054766:intron 50.0%
TATCATAAAGGGACGGGCAC+GGG - chr5.3:34118788-34118807 None:intergenic 50.0%
TATCGGGTATGGGTACCTGT+GGG + chr5.3:34119298-34119317 MS.gene054766:intron 50.0%
TTATCGGGTATGGGTACCTG+TGG + chr5.3:34119297-34119316 MS.gene054766:intron 50.0%
! AGGGCTTTGGTAAATTGGGG+TGG + chr5.3:34116122-34116141 MS.gene054766:intron 50.0%
! CACTTCCCGGTTTGAACATG+GGG + chr5.3:34121901-34121920 MS.gene054766:CDS 50.0%
! CCACTTCCCGGTTTGAACAT+GGG + chr5.3:34121900-34121919 MS.gene054766:CDS 50.0%
! GGTGAGGGAGCACAAGAATT+GGG + chr5.3:34122094-34122113 MS.gene054766:CDS 50.0%
! GTGAGGGAGCACAAGAATTG+GGG + chr5.3:34122095-34122114 MS.gene054766:CDS 50.0%
! TCCACTTCCCGGTTTGAACA+TGG + chr5.3:34121899-34121918 MS.gene054766:CDS 50.0%
! TTGACTCTGGGAACCTGGTT+TGG + chr5.3:34120079-34120098 MS.gene054766:intron 50.0%
! TTTTACCCGTGGGTACACGT+AGG + chr5.3:34119418-34119437 MS.gene054766:intron 50.0%
!! AGTGCTGGCCTCATTTGAAG+TGG - chr5.3:34116864-34116883 None:intergenic 50.0%
AAGCAACATGAGGCAGGCAG+AGG - chr5.3:34117116-34117135 None:intergenic 55.0%
CAATGCCTACGTGTACCCAC+GGG - chr5.3:34119426-34119445 None:intergenic 55.0%
CCAGACGACATGGTTGCTCA+AGG - chr5.3:34117503-34117522 None:intergenic 55.0%
CCCATGTTCAAACCGGGAAG+TGG - chr5.3:34121903-34121922 None:intergenic 55.0%
CCCTACCCCATGTTCAAACC+GGG - chr5.3:34121909-34121928 None:intergenic 55.0%
CCTTGAGCAACCATGTCGTC+TGG + chr5.3:34117500-34117519 MS.gene054766:intron 55.0%
GACGGGCACGGGTATCATAA+AGG - chr5.3:34118800-34118819 None:intergenic 55.0%
GGTATGGGTACCTGTGGGTA+TGG + chr5.3:34119303-34119322 MS.gene054766:intron 55.0%
TGAGGCAGGCAGAGGATTCA+AGG - chr5.3:34117108-34117127 None:intergenic 55.0%
TGTGGGAGTGAGGTTGTCGA+AGG - chr5.3:34120613-34120632 None:intergenic 55.0%
TTCGACAACCTCACTCCCAC+AGG + chr5.3:34120612-34120631 MS.gene054766:intron 55.0%
! AGGGAGCACAAGAATTGGGG+AGG + chr5.3:34122098-34122117 MS.gene054766:CDS 55.0%
! CCCGGTTTGAACATGGGGTA+GGG + chr5.3:34121906-34121925 MS.gene054766:intron 55.0%
! CGGTGAGGGAGCACAAGAAT+TGG + chr5.3:34122093-34122112 MS.gene054766:CDS 55.0%
! TCCCGGTTTGAACATGGGGT+AGG + chr5.3:34121905-34121924 MS.gene054766:intron 55.0%
!! CGGAAGTGTCATCTGAGCAC+TGG - chr5.3:34118677-34118696 None:intergenic 55.0%
AGAATTGGGGAGGAACGGGC+TGG + chr5.3:34122108-34122127 MS.gene054766:CDS 60.0%
AGATGTCGCCTGTGGGAGTG+AGG - chr5.3:34120623-34120642 None:intergenic 60.0%
GGCAGGCAGAGGATTCAAGG+TGG - chr5.3:34117105-34117124 None:intergenic 60.0%
CTCATGGTACGGGACGGGCA+CGG - chr5.3:34118812-34118831 None:intergenic 65.0%
TCATGGTACGGGACGGGCAC+GGG - chr5.3:34118811-34118830 None:intergenic 65.0%
!! GAACGGGCTGGACCTGACCC+TGG + chr5.3:34122120-34122139 MS.gene054766:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 34115736 34122159 34115736 ID=MS.gene054766
chr5.3 mRNA 34115736 34122159 34115736 ID=MS.gene054766.t1;Parent=MS.gene054766
chr5.3 exon 34115736 34115920 34115736 ID=MS.gene054766.t1.exon1;Parent=MS.gene054766.t1
chr5.3 CDS 34115736 34115920 34115736 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34117779 34117857 34117779 ID=MS.gene054766.t1.exon2;Parent=MS.gene054766.t1
chr5.3 CDS 34117779 34117857 34117779 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34118114 34118178 34118114 ID=MS.gene054766.t1.exon3;Parent=MS.gene054766.t1
chr5.3 CDS 34118114 34118178 34118114 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34118391 34118490 34118391 ID=MS.gene054766.t1.exon4;Parent=MS.gene054766.t1
chr5.3 CDS 34118391 34118490 34118391 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34120226 34120267 34120226 ID=MS.gene054766.t1.exon5;Parent=MS.gene054766.t1
chr5.3 CDS 34120226 34120267 34120226 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34120368 34120409 34120368 ID=MS.gene054766.t1.exon6;Parent=MS.gene054766.t1
chr5.3 CDS 34120368 34120409 34120368 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34121807 34121922 34121807 ID=MS.gene054766.t1.exon7;Parent=MS.gene054766.t1
chr5.3 CDS 34121807 34121922 34121807 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
chr5.3 exon 34122084 34122159 34122084 ID=MS.gene054766.t1.exon8;Parent=MS.gene054766.t1
chr5.3 CDS 34122084 34122159 34122084 ID=cds.MS.gene054766.t1;Parent=MS.gene054766.t1
Gene Sequence

>MS.gene054766

ATGGGAAGGAGTAAGGTGCAGCTAAAACGGATCGACAACAAGATCAATCGACAGGTTACTTTCTCAAAAAGGAGAACCGGTTTGCTCAAAAAAGCTAAAGAAATATCTGTTCTTTGTGATGCTGAAGTTGCTTTGATTATCTTCTCTGATAATGGAAAGCTCTTTGATTATTCAACTGATTCATGGTAACTAATATACAATACCCTTCTTATATATTTGCATATGTATAATTCATTGAGATCTCTATCATATAAAATTATATATATTTATTTTGAATCGATATAGATATATAGAGAGAGAGAGAGGTAAAAATTAATTATATAACCTATGCTAGCTCTTTTTTATTTATAGCAAATTTTATTTTGTTTTTTATTTTGCTCATGGAAAGGGCTTTGGTAAATTGGGGTGGAAATATAACTCTATTTTTGTTTGCTTTCATCATCAAGTCTAAAAAAAAAAAATATTAATATGTATAAATATATACATATTTAAAAAGGAGAATTTGTTCTAACTTAAAAGGAACAACAAATCATTTTTCTCCTTCAAAAAAAAAAAAACAAATCATTCTTCTAGAGGTGATGAATCTTTTGCAGATCATGAGGGTAGTACAAGCAACAACTAACCTTTTAATCTTCCTTAAAAAAAAAAAACTAACCTTTTAATCTAACTTAGTACTTACAGTTTAACTCAGATTTAGTAGTCCCTTATCTCGAGAAGAATGACTAGCTAACCCTTCGTTTGTTTAAAAATTATGCTTTTTTATTTTAGTTTTTCAGATCTAAAATGTGATGGTCGATCTGCTTCAATTTTTTGTTGTTTTTTTTTATCCATCACAAATATTATTAATTTTTTGTTTAAAAAAAACATTATTAATTTTTATTTGAGTATATCATAAATATTATTTTATATGTAGAAAATAATTTATCATAAATTACCTTCCTCTCGTTAACAATTATTGTCAACTTAAGAATGAATATAACATTGAGTATTTAATTTTTTTTTTATGTTCTAATATATTTTTTTTTGGTCAACTATGTTCTAATATATTAAACCTAAAGAAATTGAAATGTTACCAGAAAAAAAATATTCAACTTAAAGCGTTCCATTGACCATAATTGCAGTGAACCACTTCAAATGAGGCCAGCACTTTATCGCAATATCAAATTTATTAATTTTTTTTTTTTAAGCAAAAGATGGGATGTAGAGGGGTCTTCTGCTGCAGTACCTAAATCATATATTAAACGAAAGAAAAAAAGTACAAAGAAGAGGGGGGGACAAAAACCAAAACCCTTTGTAAAAGCAAAACAAAACCAAAACATATAGAAAGCAAAAAAAGCAAACTAATGAGGCGAACGGCTGGAAGCATCCACCTTGAATCCTCTGCCTGCCTCATGTTGCTTCTTCTTGAGTTTCTTCTTTCTAGGCACCAACAATTGAAAAGGTTGACTCGTGTTTTCGTCCAAATCAACAATTTCATCGTTCCGAGCCATGTTAGCTCATGATTCACTTAGAAAATTCACCGTTTGTTGGGTCTCCGTAGAATCAATTCCTAAAACTTGCATGTCATGAATAACAGATGCTCTAAAGTTTGACAAGTCTGAGTTTGTCACCACAATGGAGTTACCTTCCAAAGGAATTGTATCTGATATTGCTTCCTCTTGATGAACATCTTGACATAAAATATCAGCTGAATCACAATTCATGTCAATATTACCCTGACCATAAAGGGGTTCTGTACCTGCTAAATCACTCAAATTCTCATTACCTTGAGCAACCATGTCGTCTGGATGCATAAAATCAACAACATTAGTACCATTCACAAATCCCAATAGAGCATTATTATCAATAACTGCTTTAGTGGCATTATATGTTACACATTCAACTGATAGTCATATGTAATTGCAGCCGCAATTTAAAATCATATATCAAGATAATCATATTTCGTTACCAAAATTAAATATTATAGAGTAGAGACATGCCCTTAAGTTTCAACTGAATAATATTATAGTGTAATTTTGCTATACTGTTTCATTGATTAAACAGCATGGAGCAGATACTGGAACGCCATGAAAGGTATGGCTATGCGGAGAGACTACTTGTAGGAAATGATACTAATACTCAGGTTTGTCCTTAAACATTAAAATATATCCATAATTTATAAACAAATAAATATACATATATCTTCCCTCAATTTCTAGCATGTAAAGGATCTTAGTGTTTCTGCAACCAAAACTTTGGAGCATATACTTTTACTTTTACATTATCTCTATTTTACATCAAAAACCTCTTGAGAATAATTGGTTATTGGGTAATATACATATAAAATACGAAAAAGTAATGTAATCAAAGACCTAAGCAGCTATGTGTACGTTATTCAGGAAAACTGGACTATGGAATACACAAGACTCAATGCAAAGATTGAGCTTTTGCAGAGAAACCACAGGTATTGCTCTTCTAGTGTACTCCCTTTATATCATTATTATCCTCTTTGCTCTCTCAGAAGAAGAAAAAAAGATTATGGCCAAGTTTATATTAATGCATAATGCATATGCTTTAATTTTCCGATATAATTTTAATTTGATCATTCCCTCTTAAACATTTGCATGTGTGCAGTGTCACTTAGTATCATATGGAATTAATCTTTTTGTAATTCAGGCACTATATGGGAGAAGATTTAGATTCAATGAGCCTTAAAGAGCTTCAATGTCTAGAGCAGCAGTTAGATACTGGTCTCAAGCACATACGTACCCGCAGAGTACACATTCTTAATTACACTCTTTTCAATTTACATATGAGCAGCTTTAAATTTCCATCACCCATTGAACACCTTGTTTTCTCTCTATCTCCGTTTTTCTATCACATCATCGACTTATCACCTCTATCACATTACTCTCTGTTTCTTTTAGATGAATGTCTATTGATCATTTTCCTTTATATACCAGTGCTCAGATGACACTTCCGTACCCATTTGTTCGCTTTTTTATTACACTAACACATAAAGTTTAAACTAGGGATGTCAATGGGTACCATGGGCACAAATAGTATGATACCCGTGCCCGTCCCTTTATGATACCCGTGCCCGTCCCGTACCATGAGTTTTTGAATTTATTTAGTTTTTGGTACCAAGAATAACTTTTTTTTAATCACAAAAAAACTTCAACTTTTAAACATCCATACATAATCCTTCCAAAATTTCATAAATCATACATAATCCACAAAAAATTCATGATTCTTACATAATTCATACAAATTCTTGAAGTAAAATAAAAGCATAAAAACATCGAAATAAACATCTAAATTTTGTATGCATTCCAAACTTCAATAACTTCATTTGACTTCCCAATTCCTAAAATAAAAACATATAAATCTCTGAATAAAAATCCAAACAATCAACATGACAATGATAATTGAAATAAAATCTTATAAGATGAATTAAAAAAATTAAAAATAAAAATAGGTTATTAATGAGGAATCTTAGGTGGACGGTAAAATTTCCTTCAACAAGGTAACAACTTCAAGTAATAAGATATATAAAGATATTTTAGTAATTTACTTAATTTATTATCGGGTATGGGTACCTGTGGGTATGGGTACAATCAAATCCGTGTCCATATCCATATAATATTGGGTAGTCAAATACTCGTTATACCCGTTTAACTACCCACTCCGTGTCCATGCTGAATTTTACCCGTGGGTACACGTAGGCATTGTTATTTTTGCCACCCATAGTTTAAACATTCTTTTATTAAAATTTTGATTTTGATTTTTTTTATTGGTAGAAATTTTGATTTTTTTGATTTTGATTTTGATTTTGATTTTAATTATAGGTATAGATGTATGTGAATTCAAATTGTAACAAATCTTATTTTTCTTTTTAATGACATCAACAATATAATATTACGTTTCTTACTCAAAGATAATATATTTAATTTAATTTCCCAAAATCGAGGGTAAGTTTGTTTAATGACATTTTTTACCAAAGAAAAAAAATCAACTTAAAGAGGTGTATCATAGTTATATATAGATATAGATAGATATACAAATATCTCTCTCAATCTCTCTCTATATATATATGGTTTTGCTAGAAGACACCTTTATATACATATATAGACACATATTTATATACATATTGAAATAAAATTTTATGATTTTTATTTGTGTATCTAAATTTTAACAAGTACCTACTATTTAAGTAAATTGTAATTATTTTATTGAATTTTAAAATATTTGAAATTTTTTACTAAAAAATTTGAAACTGATTTGTGAATAAGTATAGATTGATTACAAATTATTAAAAGTCTATGAATTCGATTATAATTAAGTAATAAATTTAGGGCATATCATTGACTCTGGGAACCTGGTTTGGTATAGTATGTCAAATGGTGTATCCATCAAACATTTTTATAATAATTAACATGTGTGAATTTTTTACAAAAATAAAGCTACATTTTGGTACTAATGATAGAAAATATTATATAATTTGGTGACAGACTCAAGTCATGTATGAAGCCATTTCTGAACTTCAGAAAAAGGTACGTCCTCTAAACTCCAAGTTTATCAAGGCTTTATTTAGTTTTGTCTATTAGATAAAGAAACTAATATGACAAAATATTGTACTCTTTTATATGGCAGGAGAAAGGGATTCAAGAGCAGAATAACATGCTCTCAAAGGAGGTAAGCAACATCACTTTTAATGGTTGTTAGAACTAAACAAAGGGAAATGCTCTAAACTATTTTTCTAATATAAACTTAGATACTTGAATTACAACACCAATCAAATAATTTTAGGTCTGATTACAATCTATTATGAAGGCCTCCTTCATAATAAACCAACCCCGTGATAAAATGTCGTTATTTTGTTCCTTAAATAATGACCTTCGACAACCTCACTCCCACAGGCGACATCTACAAAGAGAAATGCTAGGGACCCACTCCCTAACACACTCCTATAACATACTCCATTGATAATTAGCCACATCATCCTATTTTGTCCTGTTATTTAAAGAAGTATGATGCAATTGTTCTAAGGACAAAACTTAGCACATGTTCCTATATCCTGTTATATTTTCCCATTCTTGACTGAAAACATAACAAAATTATTGAAATGGAAAAAAATTGTCTATTTTGTGAAGGAAAAAAAAAACTGCTTCTTTGTGAGAGAAACGGTTAGAAAAGCACACGGTGTTGTAAGTATGGTTCTTTTTTCTGAATACCACTAAAACTCATTAAATGAAGTTCACTTACACAGGGAAGATGGGTTGTTCGATAAAATAAAACTCCTGACTTTTTCGGGTGAACAGAATAGAACTATAAAATATGGGATAAAACTCACTTTAAAGTGTACTATCTGTCTTTTTGAGAGGTACTATTTTTTTAAGAGAAAACAATAACCTTATTCTCTCTAATGAATAAGACAAAATATGGATGGAGTATATTTTACTAATAAAATAAAGAGTTGTTATATATGGAAACCTCTAATTTTTTTACATCGATTCAACATCTAATTAATATTTATTATCTCTTTTTTCTTATCACATAATAAAAGAATGTATCACATCACTTTCATTGTGTCCTATAGATTTATGGGCATCCATATATAATTTTCCTAAAATAAAATTAAATTGTGATTGTTTTTATTTTAGATAACAAATAATTCTCATTGTATTTTTTCCTTAAAAAAAAAATTATCATTGTAGTTTTGTTCTTGTGCTTTTTCTAGTTCTTATCATTTGTTAGATAGTGATTGGTTTTCAGTATATCAAAACTAAATTCGAAATGTAACCCAGTAGACATACTTTAGTTGTTAGTTTTTTATTTTAGTAGTTTGAATTTGAATATTGAATCTTCTTCAGATGTCTGAACTCAACCACTTAAACTATGTATTAGGGATATCATGAATCGTTATTTAATATACTTCGGTAACTATTCAAAAATATACTTTAAATAGGAAATTGCAATTTTCTTTTCTTAGGTTTACAAATTACATTCACCTTAAATGGTAAAATAATTATTTTGCTCATATATAATTTCCATGTATTACTACAAATAATCTATTTGTGATATGAAATTAGATAAAGGAGAAGGAGAAGGTTGTTGCACAAGAGGCTGCTTGTCAATGGGAGCAGCCAAACTACAGGGTTGATACATCTTTCTTACTACAAAATCCACTTCCCGGTTTGAACATGGGGTAGGGTACAAACTTTTCTTTTACAACATAATATTGATATTTTACACTTTCATTAGGTCTTCTTCTCTAGCTATAACAATTATTATGCTTCCTATAGTTGAACTATCACTATAGTAATTAAAGTAACTTTCTCAGTATGTAACTTTGTTTTATTTATTCAGTGGCAATTACGGTGAGGGAGCACAAGAATTGGGGAGGAACGGGCTGGACCTGACCCTGGAACCACTATATTATTAA
Protein sequence

>MS.gene054766.t1

MGRSKVQLKRIDNKINRQVTFSKRRTGLLKKAKEISVLCDAEVALIIFSDNGKLFDYSTDSCMEQILERHERYGYAERLLVGNDTNTQENWTMEYTRLNAKIELLQRNHRHYMGEDLDSMSLKELQCLEQQLDTGLKHIRTRRTQVMYEAISELQKKEKGIQEQNNMLSKEIKEKEKVVAQEAACQWEQPNYRVDTSFLLQNPLPGLNMGGNYGEGAQELGRNGLDLTLEPLYY