Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071092.t1 | XP_003614234.3 | 93.6 | 173 | 10 | 1 | 1 | 172 | 63 | 235 | 4.90E-84 | 320.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071092.t1 | Q6E6S7 | 65.7 | 172 | 56 | 2 | 1 | 171 | 63 | 232 | 1.2e-54 | 214.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071092.t1 | A0A396HSY7 | 93.6 | 173 | 10 | 1 | 1 | 172 | 63 | 235 | 3.5e-84 | 320.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054766 | MS.gene071092 | 0.901564 | 2.36E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071092.t1 | MTR_5g046790 | 93.289 | 149 | 9 | 1 | 1 | 148 | 63 | 211 | 3.41e-99 | 285 |
| MS.gene071092.t1 | MTR_8g066260 | 75.000 | 172 | 41 | 2 | 1 | 171 | 63 | 233 | 1.11e-76 | 229 |
| MS.gene071092.t1 | MTR_2g461760 | 49.333 | 150 | 73 | 1 | 1 | 150 | 1 | 147 | 1.87e-46 | 150 |
| MS.gene071092.t1 | MTR_2g461760 | 49.664 | 149 | 72 | 1 | 1 | 149 | 1 | 146 | 2.38e-46 | 149 |
| MS.gene071092.t1 | MTR_4g109830 | 61.682 | 107 | 41 | 0 | 1 | 107 | 63 | 169 | 6.82e-42 | 140 |
| MS.gene071092.t1 | MTR_7g016630 | 56.303 | 119 | 49 | 2 | 1 | 119 | 63 | 178 | 3.14e-37 | 129 |
| MS.gene071092.t1 | MTR_8g097090 | 42.991 | 107 | 60 | 1 | 1 | 106 | 63 | 169 | 3.09e-17 | 76.6 |
| MS.gene071092.t1 | MTR_7g075850 | 40.385 | 104 | 61 | 1 | 3 | 106 | 66 | 168 | 2.46e-16 | 74.3 |
| MS.gene071092.t1 | MTR_4g109810 | 31.667 | 180 | 101 | 6 | 1 | 164 | 63 | 236 | 8.58e-16 | 72.8 |
| MS.gene071092.t1 | MTR_8g033270 | 36.667 | 120 | 74 | 2 | 22 | 141 | 84 | 201 | 1.39e-15 | 72.4 |
| MS.gene071092.t1 | MTR_6g015975 | 36.607 | 112 | 70 | 1 | 1 | 112 | 63 | 173 | 1.56e-15 | 72.0 |
| MS.gene071092.t1 | MTR_7g016600 | 32.075 | 159 | 99 | 3 | 1 | 151 | 63 | 220 | 2.88e-15 | 71.2 |
| MS.gene071092.t1 | MTR_3g084980 | 38.739 | 111 | 67 | 1 | 1 | 110 | 63 | 173 | 3.99e-15 | 70.9 |
| MS.gene071092.t1 | MTR_5g046830 | 40.741 | 81 | 48 | 0 | 32 | 112 | 22 | 102 | 1.20e-14 | 68.2 |
| MS.gene071092.t1 | MTR_8g033220 | 31.818 | 154 | 87 | 3 | 4 | 141 | 62 | 213 | 4.11e-13 | 65.1 |
| MS.gene071092.t1 | MTR_8g033220 | 31.818 | 154 | 87 | 3 | 4 | 141 | 62 | 213 | 4.76e-13 | 65.1 |
| MS.gene071092.t1 | MTR_7g075870 | 37.037 | 108 | 68 | 0 | 1 | 108 | 62 | 169 | 7.24e-13 | 64.3 |
| MS.gene071092.t1 | MTR_7g075870 | 37.037 | 108 | 68 | 0 | 1 | 108 | 63 | 170 | 7.65e-13 | 64.3 |
| MS.gene071092.t1 | MTR_3g452380 | 36.000 | 100 | 63 | 1 | 21 | 120 | 98 | 196 | 5.23e-12 | 62.4 |
| MS.gene071092.t1 | MTR_2g017865 | 33.945 | 109 | 69 | 1 | 10 | 115 | 83 | 191 | 9.31e-12 | 62.0 |
| MS.gene071092.t1 | MTR_8g033250 | 30.519 | 154 | 89 | 3 | 4 | 141 | 4 | 155 | 1.44e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071092.t1 | AT1G69120 | 55.676 | 185 | 68 | 3 | 1 | 171 | 1 | 185 | 3.87e-60 | 185 |
| MS.gene071092.t1 | AT1G69120 | 55.676 | 185 | 68 | 3 | 1 | 171 | 63 | 247 | 2.14e-59 | 186 |
| MS.gene071092.t1 | AT1G26310 | 53.226 | 186 | 71 | 4 | 1 | 171 | 63 | 247 | 9.37e-57 | 179 |
| MS.gene071092.t1 | AT1G69120 | 70.085 | 117 | 35 | 0 | 1 | 117 | 63 | 179 | 1.07e-53 | 170 |
| MS.gene071092.t1 | AT5G60910 | 55.000 | 120 | 54 | 0 | 1 | 120 | 1 | 120 | 2.01e-44 | 145 |
| MS.gene071092.t1 | AT5G60910 | 55.000 | 120 | 54 | 0 | 1 | 120 | 63 | 182 | 9.04e-44 | 145 |
| MS.gene071092.t1 | AT3G30260 | 41.176 | 119 | 70 | 0 | 1 | 119 | 63 | 181 | 5.64e-17 | 75.9 |
| MS.gene071092.t1 | AT3G61120 | 44.340 | 106 | 56 | 2 | 9 | 112 | 67 | 171 | 6.06e-16 | 73.2 |
| MS.gene071092.t1 | AT2G45650 | 40.566 | 106 | 62 | 1 | 1 | 106 | 62 | 166 | 6.09e-16 | 73.2 |
| MS.gene071092.t1 | AT1G24260 | 38.889 | 108 | 64 | 1 | 1 | 106 | 63 | 170 | 1.19e-15 | 72.4 |
| MS.gene071092.t1 | AT3G02310 | 34.921 | 126 | 82 | 0 | 1 | 126 | 63 | 188 | 1.37e-14 | 69.7 |
| MS.gene071092.t1 | AT1G24260 | 39.450 | 109 | 63 | 2 | 1 | 106 | 63 | 171 | 1.42e-14 | 69.7 |
| MS.gene071092.t1 | AT5G15800 | 35.714 | 112 | 72 | 0 | 1 | 112 | 63 | 174 | 6.21e-14 | 67.8 |
| MS.gene071092.t1 | AT5G15800 | 35.714 | 112 | 72 | 0 | 1 | 112 | 63 | 174 | 6.65e-14 | 67.8 |
| MS.gene071092.t1 | AT3G02310 | 38.318 | 107 | 66 | 0 | 1 | 107 | 63 | 169 | 1.40e-13 | 66.2 |
| MS.gene071092.t1 | AT2G03710 | 27.731 | 119 | 85 | 1 | 1 | 119 | 64 | 181 | 2.19e-13 | 66.2 |
| MS.gene071092.t1 | AT2G03710 | 27.731 | 119 | 85 | 1 | 1 | 119 | 64 | 181 | 2.38e-13 | 66.2 |
| MS.gene071092.t1 | AT1G24260 | 39.796 | 98 | 56 | 2 | 1 | 95 | 63 | 160 | 1.51e-12 | 63.9 |
| MS.gene071092.t1 | AT2G03710 | 29.091 | 110 | 77 | 1 | 1 | 110 | 64 | 172 | 1.74e-12 | 62.8 |
| MS.gene071092.t1 | AT4G37940 | 31.532 | 111 | 75 | 1 | 1 | 111 | 1 | 110 | 1.91e-11 | 59.7 |
| MS.gene071092.t1 | AT4G37940 | 31.532 | 111 | 75 | 1 | 1 | 111 | 62 | 171 | 3.48e-11 | 60.1 |
| MS.gene071092.t1 | AT2G45660 | 42.105 | 76 | 44 | 0 | 32 | 107 | 93 | 168 | 5.46e-11 | 59.3 |
Find 47 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGACATTGAAGCTCTTTA+AGG | 0.118825 | 5.1:-34731636 | None:intergenic |
| CATTTCTGAACTTCAGAAAA+AGG | 0.294721 | 5.1:+34733460 | MS.gene071092:CDS |
| TTTGTAATTCAGGCACTATA+TGG | 0.332000 | 5.1:+34731591 | MS.gene071092:intron |
| CCGCATAGCCATACCTTTCA+TGG | 0.344722 | 5.1:-34731012 | None:intergenic |
| TATTTATTCAGTGGCAATTA+CGG | 0.363630 | 5.1:+34735287 | MS.gene071092:intron |
| CACAAGAATTGGGGAGGAAC+GGG | 0.388252 | 5.1:+34735318 | MS.gene071092:CDS |
| ATTAATAATATAGTGGTTCC+AGG | 0.389303 | 5.1:-34735352 | None:intergenic |
| TGTACGTTATTCAGGAAAAC+TGG | 0.392322 | 5.1:+34731312 | MS.gene071092:intron |
| TTACTACAAAATCCACTTCC+CGG | 0.394416 | 5.1:+34735102 | MS.gene071092:CDS |
| GATGTATCAACCCTGTAGTT+TGG | 0.401883 | 5.1:-34735075 | None:intergenic |
| TATTCAGGAAAACTGGACTA+TGG | 0.406161 | 5.1:+34731319 | MS.gene071092:intron |
| GGTGAGGGAGCACAAGAATT+GGG | 0.408222 | 5.1:+34735308 | MS.gene071092:CDS |
| AAACAGCATGGAGCAGATAC+TGG | 0.413144 | 5.1:+34730985 | None:intergenic |
| TTCAAGAATTAATAATATAG+TGG | 0.414683 | 5.1:-34735359 | None:intergenic |
| CGGTGAGGGAGCACAAGAAT+TGG | 0.414947 | 5.1:+34735307 | MS.gene071092:CDS |
| ACCCTACCCCATGTTCAAAC+CGG | 0.420746 | 5.1:-34735121 | None:intergenic |
| CACAAGAGGCTGCTTGTCAA+TGG | 0.422774 | 5.1:+34735046 | MS.gene071092:CDS |
| TTGTAATTCAGGCACTATAT+GGG | 0.444407 | 5.1:+34731592 | MS.gene071092:intron |
| AATATAGTGGTTCCAGGGTC+AGG | 0.449271 | 5.1:-34735346 | None:intergenic |
| TCCACTTCCCGGTTTGAACA+TGG | 0.470827 | 5.1:+34735113 | MS.gene071092:CDS |
| CTAGAGCAGCAGTTAGATAC+TGG | 0.477948 | 5.1:+34731655 | MS.gene071092:CDS |
| AATGGGAGCAGCCAAACTAC+AGG | 0.479756 | 5.1:+34735064 | MS.gene071092:CDS |
| AGGAAATGATACTAATACTC+AGG | 0.501066 | 5.1:+34731048 | MS.gene071092:CDS |
| GGAGAAGGTTGTTGCACAAG+AGG | 0.506368 | 5.1:+34735032 | MS.gene071092:CDS |
| AGAATTGGGGAGGAACGGGC+TGG | 0.508159 | 5.1:+34735322 | MS.gene071092:CDS |
| TTCAGTGGCAATTACGGTGA+GGG | 0.511387 | 5.1:+34735293 | MS.gene071092:intron |
| GAACGGGCTGGACCTGACCC+TGG | 0.516728 | 5.1:+34735334 | MS.gene071092:CDS |
| ACAAGAGGCTGCTTGTCAAT+GGG | 0.517963 | 5.1:+34735047 | MS.gene071092:CDS |
| CCCATGTTCAAACCGGGAAG+TGG | 0.518713 | 5.1:-34735114 | None:intergenic |
| TATGCGGAGAGACTACTTGT+AGG | 0.519529 | 5.1:+34731028 | MS.gene071092:CDS |
| GCACAAGAATTGGGGAGGAA+CGG | 0.522070 | 5.1:+34735317 | MS.gene071092:CDS |
| ATTAAGAATGTGTACTCTGC+GGG | 0.530211 | 5.1:-34731695 | None:intergenic |
| CCACTTCCCGGTTTGAACAT+GGG | 0.530849 | 5.1:+34735114 | MS.gene071092:CDS |
| CACTTCCCGGTTTGAACATG+GGG | 0.536584 | 5.1:+34735115 | MS.gene071092:CDS |
| ATGAAATTAGATAAAGGAGA+AGG | 0.537915 | 5.1:+34735011 | MS.gene071092:intron |
| CCCTACCCCATGTTCAAACC+GGG | 0.556961 | 5.1:-34735120 | None:intergenic |
| CTGGAACGCCATGAAAGGTA+TGG | 0.567577 | 5.1:+34731004 | MS.gene071092:CDS |
| GCAGAATAACATGCTCTCAA+AGG | 0.574546 | 5.1:+34733599 | MS.gene071092:CDS |
| TTAGATAAAGGAGAAGGAGA+AGG | 0.578474 | 5.1:+34735017 | MS.gene071092:intron |
| AGATACTGGAACGCCATGAA+AGG | 0.582088 | 5.1:+34730999 | MS.gene071092:CDS |
| GTGAGGGAGCACAAGAATTG+GGG | 0.596580 | 5.1:+34735309 | MS.gene071092:CDS |
| TTAATAATATAGTGGTTCCA+GGG | 0.614066 | 5.1:-34735351 | None:intergenic |
| GAATAACATGCTCTCAAAGG+AGG | 0.623531 | 5.1:+34733602 | MS.gene071092:CDS |
| ATGGGAGCAGCCAAACTACA+GGG | 0.654027 | 5.1:+34735065 | MS.gene071092:CDS |
| ATTCAGTGGCAATTACGGTG+AGG | 0.654082 | 5.1:+34735292 | MS.gene071092:intron |
| CCATGAAAGGTATGGCTATG+CGG | 0.669287 | 5.1:+34731012 | MS.gene071092:CDS |
| AGGGAGCACAAGAATTGGGG+AGG | 0.679020 | 5.1:+34735312 | MS.gene071092:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAAATAAAAAT+AGG | + | chr5.1:34732383-34732402 | MS.gene071092:intron | 0.0% |
| !! | AATTTACTTAATTTATTATC+GGG | + | chr5.1:34732494-34732513 | MS.gene071092:intron | 10.0% |
| !! | ATTATTATAAAAATGTTTGA+TGG | - | chr5.1:34733341-34733360 | None:intergenic | 10.0% |
| !! | TGATCAAATTAAAATTATAT+CGG | - | chr5.1:34731512-34731531 | None:intergenic | 10.0% |
| !! | TTCAAAAATATACTTTAAAT+AGG | + | chr5.1:34734875-34734894 | MS.gene071092:intron | 10.0% |
| !!! | AATAATTTTTTTACCATTTA+AGG | - | chr5.1:34734942-34734961 | None:intergenic | 10.0% |
| !!! | CAATGATAATTTTTTTTTTA+AGG | - | chr5.1:34734623-34734642 | None:intergenic | 10.0% |
| !!! | GATTTATATGTTTTTATTTT+AGG | - | chr5.1:34732296-34732315 | None:intergenic | 10.0% |
| !!! | TATTTTAGGAAAATTATATA+TGG | - | chr5.1:34734543-34734562 | None:intergenic | 10.0% |
| !!! | TCACAATTTAATTTTATTTT+AGG | - | chr5.1:34734557-34734576 | None:intergenic | 10.0% |
| !!! | TTGATTTTGATTTTAATTAT+AGG | + | chr5.1:34732753-34732772 | MS.gene071092:intron | 10.0% |
| !!! | TTGATTTTGATTTTTTTTAT+TGG | + | chr5.1:34732701-34732720 | MS.gene071092:intron | 10.0% |
| !!! | TTTTGAATTTATTTAGTTTT+TGG | + | chr5.1:34732045-34732064 | MS.gene071092:intron | 10.0% |
| !! | AAATAAAGAGTTGTTATATA+TGG | + | chr5.1:34734395-34734414 | MS.gene071092:intron | 15.0% |
| !! | AATCGTTATTTAATATACTT+CGG | + | chr5.1:34734846-34734865 | MS.gene071092:intron | 15.0% |
| !! | ACATAACAAAATTATTGAAA+TGG | + | chr5.1:34734035-34734054 | MS.gene071092:intron | 15.0% |
| !! | AGAATAGAACTATAAAATAT+GGG | + | chr5.1:34734248-34734267 | MS.gene071092:intron | 15.0% |
| !! | ATAAAAATAGGTTATTAATG+AGG | + | chr5.1:34732395-34732414 | MS.gene071092:intron | 15.0% |
| !! | ATAAAAGAATGTTTAAACTA+TGG | - | chr5.1:34732674-34732693 | None:intergenic | 15.0% |
| !! | ATTATGCATTAATATAAACT+TGG | - | chr5.1:34731472-34731491 | None:intergenic | 15.0% |
| !! | TAAAAGAATGTTTAAACTAT+GGG | - | chr5.1:34732673-34732692 | None:intergenic | 15.0% |
| !! | TAAATAAATTCAAAAACTCA+TGG | - | chr5.1:34732040-34732059 | None:intergenic | 15.0% |
| !! | TTACAATTTACTTAAATAGT+AGG | - | chr5.1:34733133-34733152 | None:intergenic | 15.0% |
| !!! | AAATATTGTACTCTTTTATA+TGG | + | chr5.1:34733556-34733575 | MS.gene071092:intron | 15.0% |
| !!! | AATTAATCTTTTTGTAATTC+AGG | + | chr5.1:34731581-34731600 | MS.gene071092:intron | 15.0% |
| !!! | AGTTTTTTATTTTAGTAGTT+TGG | + | chr5.1:34734755-34734774 | MS.gene071092:intron | 15.0% |
| !!! | ATGTATGATTTATGAAATTT+TGG | - | chr5.1:34732137-34732156 | None:intergenic | 15.0% |
| !!! | ATGTTTTTATTTTAGGAATT+GGG | - | chr5.1:34732289-34732308 | None:intergenic | 15.0% |
| !!! | TATGTTTTTATTTTAGGAAT+TGG | - | chr5.1:34732290-34732309 | None:intergenic | 15.0% |
| !!! | TGGATATATTTTAATGTTTA+AGG | - | chr5.1:34731079-34731098 | None:intergenic | 15.0% |
| !!! | TTAAGTTGATTTTTTTTCTT+TGG | - | chr5.1:34732927-34732946 | None:intergenic | 15.0% |
| !! | AACACATAAAGTTTAAACTA+GGG | + | chr5.1:34731938-34731957 | MS.gene071092:intron | 20.0% |
| !! | AATCGATGTAAAAAAATTAG+AGG | - | chr5.1:34734424-34734443 | None:intergenic | 20.0% |
| !! | AGAAGAAGAAAAAAAGATTA+TGG | + | chr5.1:34731446-34731465 | MS.gene071092:intron | 20.0% |
| !! | AGAGGATAATAATGATATAA+AGG | - | chr5.1:34731416-34731435 | None:intergenic | 20.0% |
| !! | ATCATACTTCTTTAAATAAC+AGG | - | chr5.1:34733944-34733963 | None:intergenic | 20.0% |
| !! | CAGAATAGAACTATAAAATA+TGG | + | chr5.1:34734247-34734266 | MS.gene071092:intron | 20.0% |
| !! | CTAATGAATAAGACAAAATA+TGG | + | chr5.1:34734351-34734370 | MS.gene071092:intron | 20.0% |
| !! | GAAAAAAAATCAACTTAAAG+AGG | + | chr5.1:34732929-34732948 | MS.gene071092:intron | 20.0% |
| !! | GAGGATAATAATGATATAAA+GGG | - | chr5.1:34731415-34731434 | None:intergenic | 20.0% |
| !! | GTGTCTATATATGTATATAA+AGG | - | chr5.1:34733044-34733063 | None:intergenic | 20.0% |
| !! | TAACACATAAAGTTTAAACT+AGG | + | chr5.1:34731937-34731956 | MS.gene071092:intron | 20.0% |
| !! | TGTGATATGAAATTAGATAA+AGG | + | chr5.1:34735005-34735024 | MS.gene071092:intron | 20.0% |
| !! | TTTAAATAACAGGACAAAAT+AGG | - | chr5.1:34733934-34733953 | None:intergenic | 20.0% |
| !!! | AAAAATTGTCTATTTTGTGA+AGG | + | chr5.1:34734060-34734079 | MS.gene071092:intron | 20.0% |
| !!! | AAAATAACGACATTTTATCA+CGG | - | chr5.1:34733788-34733807 | None:intergenic | 20.0% |
| !!! | AACACCAATCAAATAATTTT+AGG | + | chr5.1:34733716-34733735 | MS.gene071092:intron | 20.0% |
| !!! | AATTGCAATTTTCTTTTCTT+AGG | + | chr5.1:34734899-34734918 | MS.gene071092:intron | 20.0% |
| !!! | ACAAAAATAAAGCTACATTT+TGG | + | chr5.1:34733380-34733399 | MS.gene071092:intron | 20.0% |
| !!! | ACTTTGTTTTATTTATTCAG+TGG | + | chr5.1:34735278-34735297 | MS.gene071092:intron | 20.0% |
| !!! | ATGATTTATGAAATTTTGGA+AGG | - | chr5.1:34732133-34732152 | None:intergenic | 20.0% |
| !!! | TAAGAATCATGAATTTTTTG+TGG | - | chr5.1:34732163-34732182 | None:intergenic | 20.0% |
| !!! | TGATATTTTACACTTTCATT+AGG | + | chr5.1:34735171-34735190 | MS.gene071092:intron | 20.0% |
| ! | AAAAACCTCTTGAGAATAAT+TGG | + | chr5.1:34731226-34731245 | MS.gene071092:intron | 25.0% |
| ! | AAATAAAGCCTTGATAAACT+TGG | - | chr5.1:34733501-34733520 | None:intergenic | 25.0% |
| ! | AAATTCAAAAACTCATGGTA+CGG | - | chr5.1:34732035-34732054 | None:intergenic | 25.0% |
| ! | AACCACTTAAACTATGTATT+AGG | + | chr5.1:34734814-34734833 | MS.gene071092:intron | 25.0% |
| ! | AATAACCAATTATTCTCAAG+AGG | - | chr5.1:34731234-34731253 | None:intergenic | 25.0% |
| ! | ACCACTTAAACTATGTATTA+GGG | + | chr5.1:34734815-34734834 | MS.gene071092:intron | 25.0% |
| ! | ACTTAATTTATTATCGGGTA+TGG | + | chr5.1:34732499-34732518 | MS.gene071092:intron | 25.0% |
| ! | ATATTATATGGATATGGACA+CGG | - | chr5.1:34732553-34732572 | None:intergenic | 25.0% |
| ! | ATGAAATTAGATAAAGGAGA+AGG | + | chr5.1:34735011-34735030 | MS.gene071092:intron | 25.0% |
| ! | ATTGTGTCCTATAGATTTAT+GGG | + | chr5.1:34734514-34734533 | MS.gene071092:intron | 25.0% |
| ! | CAAATGAAGTTATTGAAGTT+TGG | - | chr5.1:34732262-34732281 | None:intergenic | 25.0% |
| ! | CAAATTACATTCACCTTAAA+TGG | + | chr5.1:34734926-34734945 | MS.gene071092:intron | 25.0% |
| ! | CAGACCTAAAATTATTTGAT+TGG | - | chr5.1:34733723-34733742 | None:intergenic | 25.0% |
| ! | CTGATTACAATCTATTATGA+AGG | + | chr5.1:34733740-34733759 | MS.gene071092:intron | 25.0% |
| ! | CTTAATTTATTATCGGGTAT+GGG | + | chr5.1:34732500-34732519 | MS.gene071092:intron | 25.0% |
| ! | CTTATTCATTAGAGAGAATA+AGG | - | chr5.1:34734343-34734362 | None:intergenic | 25.0% |
| ! | CTTGAGAATAATTGGTTATT+GGG | + | chr5.1:34731234-34731253 | MS.gene071092:intron | 25.0% |
| ! | GTCCATATCCATATAATATT+GGG | + | chr5.1:34732554-34732573 | MS.gene071092:intron | 25.0% |
| ! | GTGTTAGTGTAATAAAAAAG+CGG | - | chr5.1:34731923-34731942 | None:intergenic | 25.0% |
| ! | TAATAAAAAAGCGGACAAAT+GGG | - | chr5.1:34731914-34731933 | None:intergenic | 25.0% |
| ! | TACCCAATATTATATGGATA+TGG | - | chr5.1:34732559-34732578 | None:intergenic | 25.0% |
| ! | TATAGTGATAGTTCAACTAT+AGG | - | chr5.1:34735230-34735249 | None:intergenic | 25.0% |
| ! | TATTTATTCAGTGGCAATTA+CGG | + | chr5.1:34735287-34735306 | MS.gene071092:intron | 25.0% |
| ! | TCTCTCTCTCTATATATATA+TGG | + | chr5.1:34733003-34733022 | MS.gene071092:intron | 25.0% |
| ! | TCTTGAGAATAATTGGTTAT+TGG | + | chr5.1:34731233-34731252 | MS.gene071092:intron | 25.0% |
| ! | TGAATAAGACAAAATATGGA+TGG | + | chr5.1:34734355-34734374 | MS.gene071092:intron | 25.0% |
| ! | TGTCCATATCCATATAATAT+TGG | + | chr5.1:34732553-34732572 | MS.gene071092:intron | 25.0% |
| ! | TTAATAATATAGTGGTTCCA+GGG | - | chr5.1:34735354-34735373 | None:intergenic | 25.0% |
| ! | TTTGACTACCCAATATTATA+TGG | - | chr5.1:34732565-34732584 | None:intergenic | 25.0% |
| !! | AAATAACGACATTTTATCAC+GGG | - | chr5.1:34733787-34733806 | None:intergenic | 25.0% |
| !! | AATAAAACTCCTGACTTTTT+CGG | + | chr5.1:34734219-34734238 | MS.gene071092:intron | 25.0% |
| !! | AATTTAATTTCCCAAAATCG+AGG | + | chr5.1:34732875-34732894 | MS.gene071092:intron | 25.0% |
| !! | ATCATTTGTTAGATAGTGAT+TGG | + | chr5.1:34734674-34734693 | MS.gene071092:intron | 25.0% |
| !! | ATTTAATTTCCCAAAATCGA+GGG | + | chr5.1:34732876-34732895 | MS.gene071092:intron | 25.0% |
| !! | TTATGTTTTCAGTCAAGAAT+GGG | - | chr5.1:34734021-34734040 | None:intergenic | 25.0% |
| !! | TTTTCAATGGAGTATGTTAT+AGG | - | chr5.1:34733898-34733917 | None:intergenic | 25.0% |
| !!! | AATTTTGGAAGGATTATGTA+TGG | - | chr5.1:34732122-34732141 | None:intergenic | 25.0% |
| !!! | CTTCATTTAATGAGTTTTAG+TGG | - | chr5.1:34734165-34734184 | None:intergenic | 25.0% |
| AAATGAAGTTCACTTACACA+GGG | + | chr5.1:34734177-34734196 | MS.gene071092:intron | 30.0% | |
| AACAACTAAAGTATGTCTAC+TGG | - | chr5.1:34734735-34734754 | None:intergenic | 30.0% | |
| AAGAATGTTTAAACTATGGG+TGG | - | chr5.1:34732670-34732689 | None:intergenic | 30.0% | |
| AATTAAGAATGTGTACTCTG+CGG | - | chr5.1:34731699-34731718 | None:intergenic | 30.0% | |
| AATTCAAAAACTCATGGTAC+GGG | - | chr5.1:34732034-34732053 | None:intergenic | 30.0% | |
| ACAACTAAAGTATGTCTACT+GGG | - | chr5.1:34734734-34734753 | None:intergenic | 30.0% | |
| ACACATGCAAATGTTTAAGA+GGG | - | chr5.1:34731537-34731556 | None:intergenic | 30.0% | |
| AGGAAATGATACTAATACTC+AGG | + | chr5.1:34731048-34731067 | MS.gene071092:CDS | 30.0% | |
| AGTATGATGCAATTGTTCTA+AGG | + | chr5.1:34733956-34733975 | MS.gene071092:intron | 30.0% | |
| ATATATCTTCCCTCAATTTC+TGG | + | chr5.1:34731123-34731142 | MS.gene071092:intron | 30.0% | |
| ATCTACAAAGAGAAATGCTA+GGG | + | chr5.1:34733853-34733872 | MS.gene071092:intron | 30.0% | |
| CAAGAATGGGAAAATATAAC+AGG | - | chr5.1:34734008-34734027 | None:intergenic | 30.0% | |
| CATTGTGTCCTATAGATTTA+TGG | + | chr5.1:34734513-34734532 | MS.gene071092:intron | 30.0% | |
| CATTTCTGAACTTCAGAAAA+AGG | + | chr5.1:34733460-34733479 | MS.gene071092:CDS | 30.0% | |
| GGGAAAATATAACAGGATAT+AGG | - | chr5.1:34734001-34734020 | None:intergenic | 30.0% | |
| GGTTATTAATGAGGAATCTT+AGG | + | chr5.1:34732404-34732423 | MS.gene071092:intron | 30.0% | |
| GGTTGTTAGAACTAAACAAA+GGG | + | chr5.1:34733645-34733664 | MS.gene071092:intron | 30.0% | |
| GTAATAAAAAAGCGGACAAA+TGG | - | chr5.1:34731915-34731934 | None:intergenic | 30.0% | |
| GTTTGGTATAGTATGTCAAA+TGG | + | chr5.1:34733310-34733329 | MS.gene071092:intron | 30.0% | |
| TAAATGAAGTTCACTTACAC+AGG | + | chr5.1:34734176-34734195 | MS.gene071092:intron | 30.0% | |
| TATTAATGAGGAATCTTAGG+TGG | + | chr5.1:34732407-34732426 | MS.gene071092:intron | 30.0% | |
| TCCCTAATACATAGTTTAAG+TGG | - | chr5.1:34734819-34734838 | None:intergenic | 30.0% | |
| TCGATGATGTGATAGAAAAA+CGG | - | chr5.1:34731796-34731815 | None:intergenic | 30.0% | |
| TCTAAACTCCAAGTTTATCA+AGG | + | chr5.1:34733490-34733509 | MS.gene071092:intron | 30.0% | |
| TGGTTGTTAGAACTAAACAA+AGG | + | chr5.1:34733644-34733663 | MS.gene071092:intron | 30.0% | |
| TTGATAAACTTGGAGTTTAG+AGG | - | chr5.1:34733491-34733510 | None:intergenic | 30.0% | |
| TTGTAATTCAGGCACTATAT+GGG | + | chr5.1:34731592-34731611 | MS.gene071092:intron | 30.0% | |
| TTGTCGAAGGTCATTATTTA+AGG | - | chr5.1:34733814-34733833 | None:intergenic | 30.0% | |
| TTTAAACTAGGGATGTCAAT+GGG | + | chr5.1:34731949-34731968 | MS.gene071092:intron | 30.0% | |
| TTTGTAATTCAGGCACTATA+TGG | + | chr5.1:34731591-34731610 | MS.gene071092:intron | 30.0% | |
| ! | AAGTATATGCTCCAAAGTTT+TGG | - | chr5.1:34731177-34731196 | None:intergenic | 30.0% |
| ! | AATAACGACATTTTATCACG+GGG | - | chr5.1:34733786-34733805 | None:intergenic | 30.0% |
| ! | ATGATGTGGCTAATTTTCAA+TGG | - | chr5.1:34733911-34733930 | None:intergenic | 30.0% |
| ! | ATTGTACTCTTTTATATGGC+AGG | + | chr5.1:34733560-34733579 | MS.gene071092:intron | 30.0% |
| ! | GTTATGTTTTCAGTCAAGAA+TGG | - | chr5.1:34734022-34734041 | None:intergenic | 30.0% |
| ! | TATGTTATAGGAGTGTGTTA+GGG | - | chr5.1:34733886-34733905 | None:intergenic | 30.0% |
| ! | TCATTGTCATGTTGATTGTT+TGG | - | chr5.1:34732332-34732351 | None:intergenic | 30.0% |
| !! | ATAAAACTCCTGACTTTTTC+GGG | + | chr5.1:34734220-34734239 | MS.gene071092:intron | 30.0% |
| !! | GTAAGCAACATCACTTTTAA+TGG | + | chr5.1:34733624-34733643 | MS.gene071092:intron | 30.0% |
| !!! | CTTTTTCTGAAGTTCAGAAA+TGG | - | chr5.1:34733462-34733481 | None:intergenic | 30.0% |
| AACAGAGAGTAATGTGATAG+AGG | - | chr5.1:34731826-34731845 | None:intergenic | 35.0% | |
| ATGGATGCCCATAAATCTAT+AGG | - | chr5.1:34734524-34734543 | None:intergenic | 35.0% | |
| ATTAAGAATGTGTACTCTGC+GGG | - | chr5.1:34731698-34731717 | None:intergenic | 35.0% | |
| CACACATGCAAATGTTTAAG+AGG | - | chr5.1:34731538-34731557 | None:intergenic | 35.0% | |
| CATCTACAAAGAGAAATGCT+AGG | + | chr5.1:34733852-34733871 | MS.gene071092:intron | 35.0% | |
| CGGTAAAATTTCCTTCAACA+AGG | + | chr5.1:34732431-34732450 | MS.gene071092:intron | 35.0% | |
| CTAGACATTGAAGCTCTTTA+AGG | - | chr5.1:34731639-34731658 | None:intergenic | 35.0% | |
| CTTTACATGCCAGAAATTGA+GGG | - | chr5.1:34731135-34731154 | None:intergenic | 35.0% | |
| GGTAAAATTCATCATGGACA+CGG | - | chr5.1:34732617-34732636 | None:intergenic | 35.0% | |
| GTTTAAACTAGGGATGTCAA+TGG | + | chr5.1:34731948-34731967 | MS.gene071092:intron | 35.0% | |
| TATCATACTATTTGTGCCCA+TGG | - | chr5.1:34731977-34731996 | None:intergenic | 35.0% | |
| TATTCAGGAAAACTGGACTA+TGG | + | chr5.1:34731319-34731338 | MS.gene071092:intron | 35.0% | |
| TGAAGTTGTTACCTTGTTGA+AGG | - | chr5.1:34732445-34732464 | None:intergenic | 35.0% | |
| TGTACGTTATTCAGGAAAAC+TGG | + | chr5.1:34731312-34731331 | MS.gene071092:intron | 35.0% | |
| TTACTACAAAATCCACTTCC+CGG | + | chr5.1:34735102-34735121 | MS.gene071092:CDS | 35.0% | |
| TTAGATAAAGGAGAAGGAGA+AGG | + | chr5.1:34735017-34735036 | MS.gene071092:intron | 35.0% | |
| TTGACATACTATACCAAACC+AGG | - | chr5.1:34733309-34733328 | None:intergenic | 35.0% | |
| ! | AACAAACTTACCCTCGATTT+TGG | - | chr5.1:34732889-34732908 | None:intergenic | 35.0% |
| ! | ACAAACTTACCCTCGATTTT+GGG | - | chr5.1:34732888-34732907 | None:intergenic | 35.0% |
| ! | AGAGAAAACAAGGTGTTCAA+TGG | - | chr5.1:34731767-34731786 | None:intergenic | 35.0% |
| ! | CTTTTATATGGCAGGAGAAA+GGG | + | chr5.1:34733568-34733587 | MS.gene071092:intron | 35.0% |
| ! | GAGAAAACAAGGTGTTCAAT+GGG | - | chr5.1:34731766-34731785 | None:intergenic | 35.0% |
| ! | GTATGTTATAGGAGTGTGTT+AGG | - | chr5.1:34733887-34733906 | None:intergenic | 35.0% |
| ! | TCTTTTATATGGCAGGAGAA+AGG | + | chr5.1:34733567-34733586 | MS.gene071092:intron | 35.0% |
| ! | TGTTTCTGCAACCAAAACTT+TGG | + | chr5.1:34731163-34731182 | MS.gene071092:intron | 35.0% |
| !! | ATCTGAGCACTGGTATATAA+AGG | - | chr5.1:34731879-34731898 | None:intergenic | 35.0% |
| !! | CAGTGTCACTTAGTTTCATA+TGG | + | chr5.1:34731558-34731577 | MS.gene071092:intron | 35.0% |
| !! | GTACTATCTGTCTTTTTGAG+AGG | + | chr5.1:34734290-34734309 | MS.gene071092:intron | 35.0% |
| AAAAAGCGGACAAATGGGTA+CGG | - | chr5.1:34731909-34731928 | None:intergenic | 40.0% | |
| AATGAGGAATCTTAGGTGGA+CGG | + | chr5.1:34732411-34732430 | MS.gene071092:intron | 40.0% | |
| ACGGAGATAGAGAGAAAACA+AGG | - | chr5.1:34731777-34731796 | None:intergenic | 40.0% | |
| CAGCTATGTGTACGTTATTC+AGG | + | chr5.1:34731304-34731323 | MS.gene071092:intron | 40.0% | |
| CAGGACAAAATAGGATGATG+TGG | - | chr5.1:34733925-34733944 | None:intergenic | 40.0% | |
| CCTTTACATGCCAGAAATTG+AGG | - | chr5.1:34731136-34731155 | None:intergenic | 40.0% | |
| CTGCTTCTTTGTGAGAGAAA+CGG | + | chr5.1:34734093-34734112 | MS.gene071092:intron | 40.0% | |
| GAATAACATGCTCTCAAAGG+AGG | + | chr5.1:34733602-34733621 | MS.gene071092:CDS | 40.0% | |
| GATGTATCAACCCTGTAGTT+TGG | - | chr5.1:34735078-34735097 | None:intergenic | 40.0% | |
| GCAGAATAACATGCTCTCAA+AGG | + | chr5.1:34733599-34733618 | MS.gene071092:CDS | 40.0% | |
| TAACGTACACATAGCTGCTT+AGG | - | chr5.1:34731301-34731320 | None:intergenic | 40.0% | |
| TTCACTTACACAGGGAAGAT+GGG | + | chr5.1:34734185-34734204 | MS.gene071092:intron | 40.0% | |
| ! | CCATGATGAATTTTACCCGT+GGG | + | chr5.1:34732620-34732639 | MS.gene071092:intron | 40.0% |
| ! | GAAACGGTTAGAAAAGCACA+TGG | + | chr5.1:34734109-34734128 | MS.gene071092:intron | 40.0% |
| ! | TCCATGATGAATTTTACCCG+TGG | + | chr5.1:34732619-34732638 | MS.gene071092:intron | 40.0% |
| !! | ACGGGGTTGGTTTATTATGA+AGG | - | chr5.1:34733769-34733788 | None:intergenic | 40.0% |
| !! | AGCACATGGTGTTGTAAGTA+TGG | + | chr5.1:34734123-34734142 | MS.gene071092:intron | 40.0% |
| !! | CCTCAATTTCTGGCATGTAA+AGG | + | chr5.1:34731133-34731152 | MS.gene071092:intron | 40.0% |
| !! | GGGTTGGTTTATTATGAAGG+AGG | - | chr5.1:34733766-34733785 | None:intergenic | 40.0% |
| !! | TAGGGCATATCATTGACTCT+GGG | + | chr5.1:34733281-34733300 | MS.gene071092:intron | 40.0% |
| !! | TTAGGGCATATCATTGACTC+TGG | + | chr5.1:34733280-34733299 | MS.gene071092:intron | 40.0% |
| AATATAGTGGTTCCAGGGTC+AGG | - | chr5.1:34735349-34735368 | None:intergenic | 45.0% | |
| AATTCATCATGGACACGGAG+TGG | - | chr5.1:34732612-34732631 | None:intergenic | 45.0% | |
| ACAAGAGGCTGCTTGTCAAT+GGG | + | chr5.1:34735047-34735066 | MS.gene071092:CDS | 45.0% | |
| ACACGGAGTGGGTAGTTAAA+CGG | - | chr5.1:34732600-34732619 | None:intergenic | 45.0% | |
| ACACGGGTATCATAAAGGGA+CGG | - | chr5.1:34732007-34732026 | None:intergenic | 45.0% | |
| ACGGACACGGGTATCATAAA+GGG | - | chr5.1:34732011-34732030 | None:intergenic | 45.0% | |
| AGATACTGGAACGCCATGAA+AGG | + | chr5.1:34730999-34731018 | MS.gene071092:CDS | 45.0% | |
| ATTCAGTGGCAATTACGGTG+AGG | + | chr5.1:34735292-34735311 | MS.gene071092:intron | 45.0% | |
| ATTCATCATGGACACGGAGT+GGG | - | chr5.1:34732611-34732630 | None:intergenic | 45.0% | |
| CAAAAACTCATGGTACGGGA+CGG | - | chr5.1:34732030-34732049 | None:intergenic | 45.0% | |
| CACTAGAAGAGCAATACCTG+TGG | - | chr5.1:34731388-34731407 | None:intergenic | 45.0% | |
| CCCACGGGTAAAATTCATCA+TGG | - | chr5.1:34732623-34732642 | None:intergenic | 45.0% | |
| CTAGAGCAGCAGTTAGATAC+TGG | + | chr5.1:34731655-34731674 | MS.gene071092:CDS | 45.0% | |
| GTTCACTTACACAGGGAAGA+TGG | + | chr5.1:34734184-34734203 | MS.gene071092:intron | 45.0% | |
| TATGCGGAGAGACTACTTGT+AGG | + | chr5.1:34731028-34731047 | MS.gene071092:CDS | 45.0% | |
| TCTGTTCACCCGAAAAAGTC+AGG | - | chr5.1:34734231-34734250 | None:intergenic | 45.0% | |
| TCTTTGTAGATGTCGCCTGT+GGG | - | chr5.1:34733844-34733863 | None:intergenic | 45.0% | |
| TTCAGTGGCAATTACGGTGA+GGG | + | chr5.1:34735293-34735312 | MS.gene071092:intron | 45.0% | |
| TTGATTGTACCCATACCCAC+AGG | - | chr5.1:34732528-34732547 | None:intergenic | 45.0% | |
| ! | ACAAGGTGTTCAATGGGTGA+TGG | - | chr5.1:34731760-34731779 | None:intergenic | 45.0% |
| ! | ACGACATTTTATCACGGGGT+TGG | - | chr5.1:34733782-34733801 | None:intergenic | 45.0% |
| ! | AGCTTTTGCAGAGAAACCAC+AGG | + | chr5.1:34731369-34731388 | MS.gene071092:CDS | 45.0% |
| ! | ATAGGAGTGTGTTAGGGAGT+GGG | - | chr5.1:34733880-34733899 | None:intergenic | 45.0% |
| ! | CCATGAAAGGTATGGCTATG+CGG | + | chr5.1:34731012-34731031 | MS.gene071092:CDS | 45.0% |
| ! | CTTCTTCTGAGAGAGCAAAG+AGG | - | chr5.1:34731434-34731453 | None:intergenic | 45.0% |
| ! | TATAGGAGTGTGTTAGGGAG+TGG | - | chr5.1:34733881-34733900 | None:intergenic | 45.0% |
| !! | TATCATTGACTCTGGGAACC+TGG | + | chr5.1:34733288-34733307 | MS.gene071092:intron | 45.0% |
| !! | ATAATTAAGTAATAAATTTA+GGG | + | chr5.1:34733263-34733282 | MS.gene071092:intron | 5.0% |
| !! | ATAGAAAATATTATATAATT+TGG | + | chr5.1:34733411-34733430 | MS.gene071092:intron | 5.0% |
| !! | ATTTATTTGTTTATAAATTA+TGG | - | chr5.1:34731099-34731118 | None:intergenic | 5.0% |
| !! | TAATTTACTTAATTTATTAT+CGG | + | chr5.1:34732493-34732512 | MS.gene071092:intron | 5.0% |
| !! | TATAATTAAGTAATAAATTT+AGG | + | chr5.1:34733262-34733281 | MS.gene071092:intron | 5.0% |
| AATGGGAGCAGCCAAACTAC+AGG | + | chr5.1:34735064-34735083 | MS.gene071092:CDS | 50.0% | |
| ACCCTACCCCATGTTCAAAC+CGG | - | chr5.1:34735124-34735143 | None:intergenic | 50.0% | |
| AGGGATGTCAATGGGTACCA+TGG | + | chr5.1:34731957-34731976 | MS.gene071092:intron | 50.0% | |
| ATGGGAGCAGCCAAACTACA+GGG | + | chr5.1:34735065-34735084 | MS.gene071092:CDS | 50.0% | |
| CACAAGAATTGGGGAGGAAC+GGG | + | chr5.1:34735318-34735337 | MS.gene071092:CDS | 50.0% | |
| CACAAGAGGCTGCTTGTCAA+TGG | + | chr5.1:34735046-34735065 | MS.gene071092:CDS | 50.0% | |
| CACGGAGTGGGTAGTTAAAC+GGG | - | chr5.1:34732599-34732618 | None:intergenic | 50.0% | |
| CACGGGTATCATAAAGGGAC+GGG | - | chr5.1:34732006-34732025 | None:intergenic | 50.0% | |
| CCGCATAGCCATACCTTTCA+TGG | - | chr5.1:34731015-34731034 | None:intergenic | 50.0% | |
| CTCTTTGTAGATGTCGCCTG+TGG | - | chr5.1:34733845-34733864 | None:intergenic | 50.0% | |
| CTGGAACGCCATGAAAGGTA+TGG | + | chr5.1:34731004-34731023 | MS.gene071092:CDS | 50.0% | |
| GACGGACACGGGTATCATAA+AGG | - | chr5.1:34732012-34732031 | None:intergenic | 50.0% | |
| GCACAAGAATTGGGGAGGAA+CGG | + | chr5.1:34735317-34735336 | MS.gene071092:CDS | 50.0% | |
| GGAGAAGGTTGTTGCACAAG+AGG | + | chr5.1:34735032-34735051 | MS.gene071092:CDS | 50.0% | |
| GGGATGTCAATGGGTACCAT+GGG | + | chr5.1:34731958-34731977 | MS.gene071092:intron | 50.0% | |
| GTATCATAAAGGGACGGGCA+CGG | - | chr5.1:34732001-34732020 | None:intergenic | 50.0% | |
| GTATGGGTACCTGTGGGTAT+GGG | + | chr5.1:34732516-34732535 | MS.gene071092:intron | 50.0% | |
| TATCATAAAGGGACGGGCAC+GGG | - | chr5.1:34732000-34732019 | None:intergenic | 50.0% | |
| TATCGGGTATGGGTACCTGT+GGG | + | chr5.1:34732510-34732529 | MS.gene071092:intron | 50.0% | |
| TTATCGGGTATGGGTACCTG+TGG | + | chr5.1:34732509-34732528 | MS.gene071092:intron | 50.0% | |
| ! | CACTTCCCGGTTTGAACATG+GGG | + | chr5.1:34735115-34735134 | MS.gene071092:CDS | 50.0% |
| ! | CCACTTCCCGGTTTGAACAT+GGG | + | chr5.1:34735114-34735133 | MS.gene071092:CDS | 50.0% |
| ! | GGTGAGGGAGCACAAGAATT+GGG | + | chr5.1:34735308-34735327 | MS.gene071092:CDS | 50.0% |
| ! | GTGAGGGAGCACAAGAATTG+GGG | + | chr5.1:34735309-34735328 | MS.gene071092:CDS | 50.0% |
| ! | TCCACTTCCCGGTTTGAACA+TGG | + | chr5.1:34735113-34735132 | MS.gene071092:CDS | 50.0% |
| ! | TTGACTCTGGGAACCTGGTT+TGG | + | chr5.1:34733293-34733312 | MS.gene071092:intron | 50.0% |
| ! | TTTTACCCGTGGGTACACGT+AGG | + | chr5.1:34732630-34732649 | MS.gene071092:intron | 50.0% |
| CCCATGTTCAAACCGGGAAG+TGG | - | chr5.1:34735117-34735136 | None:intergenic | 55.0% | |
| CCCTACCCCATGTTCAAACC+GGG | - | chr5.1:34735123-34735142 | None:intergenic | 55.0% | |
| GGTATGGGTACCTGTGGGTA+TGG | + | chr5.1:34732515-34732534 | MS.gene071092:intron | 55.0% | |
| TGTGGGAGTGAGGTTGTCGA+AGG | - | chr5.1:34733827-34733846 | None:intergenic | 55.0% | |
| TTCGACAACCTCACTCCCAC+AGG | + | chr5.1:34733826-34733845 | MS.gene071092:intron | 55.0% | |
| ! | AGGGAGCACAAGAATTGGGG+AGG | + | chr5.1:34735312-34735331 | MS.gene071092:CDS | 55.0% |
| ! | CCCGGTTTGAACATGGGGTA+GGG | + | chr5.1:34735120-34735139 | MS.gene071092:intron | 55.0% |
| ! | CGGTGAGGGAGCACAAGAAT+TGG | + | chr5.1:34735307-34735326 | MS.gene071092:CDS | 55.0% |
| ! | TCCCGGTTTGAACATGGGGT+AGG | + | chr5.1:34735119-34735138 | MS.gene071092:intron | 55.0% |
| !! | CGGAAGTGTCATCTGAGCAC+TGG | - | chr5.1:34731889-34731908 | None:intergenic | 55.0% |
| AGAATTGGGGAGGAACGGGC+TGG | + | chr5.1:34735322-34735341 | MS.gene071092:CDS | 60.0% | |
| AGATGTCGCCTGTGGGAGTG+AGG | - | chr5.1:34733837-34733856 | None:intergenic | 60.0% | |
| CCATGCCTACGTGTACCCAC+GGG | - | chr5.1:34732638-34732657 | None:intergenic | 60.0% | |
| CCCATGCCTACGTGTACCCA+CGG | - | chr5.1:34732639-34732658 | None:intergenic | 60.0% | |
| CCGTGGGTACACGTAGGCAT+GGG | + | chr5.1:34732636-34732655 | MS.gene071092:intron | 60.0% | |
| CTCATGGTACGGGACGGACA+CGG | - | chr5.1:34732024-34732043 | None:intergenic | 60.0% | |
| TCATGGTACGGGACGGACAC+GGG | - | chr5.1:34732023-34732042 | None:intergenic | 60.0% | |
| CCCGTGGGTACACGTAGGCA+TGG | + | chr5.1:34732635-34732654 | MS.gene071092:intron | 65.0% | |
| !! | GAACGGGCTGGACCTGACCC+TGG | + | chr5.1:34735334-34735353 | MS.gene071092:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 34730992 | 34735373 | 34730992 | ID=MS.gene071092 |
| chr5.1 | mRNA | 34730992 | 34735373 | 34730992 | ID=MS.gene071092.t1;Parent=MS.gene071092 |
| chr5.1 | exon | 34730992 | 34731069 | 34730992 | ID=MS.gene071092.t1.exon1;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34730992 | 34731069 | 34730992 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| chr5.1 | exon | 34731326 | 34731390 | 34731326 | ID=MS.gene071092.t1.exon2;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34731326 | 34731390 | 34731326 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| chr5.1 | exon | 34731603 | 34731702 | 34731603 | ID=MS.gene071092.t1.exon3;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34731603 | 34731702 | 34731603 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| chr5.1 | exon | 34733440 | 34733481 | 34733440 | ID=MS.gene071092.t1.exon4;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34733440 | 34733481 | 34733440 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| chr5.1 | exon | 34733582 | 34733623 | 34733582 | ID=MS.gene071092.t1.exon5;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34733582 | 34733623 | 34733582 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| chr5.1 | exon | 34735021 | 34735136 | 34735021 | ID=MS.gene071092.t1.exon6;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34735021 | 34735136 | 34735021 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| chr5.1 | exon | 34735298 | 34735373 | 34735298 | ID=MS.gene071092.t1.exon7;Parent=MS.gene071092.t1 |
| chr5.1 | CDS | 34735298 | 34735373 | 34735298 | ID=cds.MS.gene071092.t1;Parent=MS.gene071092.t1 |
| Gene Sequence |
| Protein sequence |
