Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055407.t1 | XP_013443850.1 | 95.1 | 409 | 20 | 0 | 1 | 409 | 1 | 409 | 2.40E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055407.t1 | O23179 | 46.0 | 391 | 181 | 8 | 21 | 383 | 7 | 395 | 3.8e-83 | 310.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055407.t1 | A0A072TWK0 | 95.1 | 409 | 20 | 0 | 1 | 409 | 1 | 409 | 1.7e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055407 | MS.gene48401 | 0.808965 | 2.39E-50 | -1.69E-46 |
| MS.gene055407 | MS.gene99149 | 0.981469 | 1.15E-152 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055407.t1 | MTR_8g007140 | 95.110 | 409 | 20 | 0 | 1 | 409 | 1 | 409 | 0.0 | 770 |
| MS.gene055407.t1 | MTR_8g007095 | 57.109 | 422 | 153 | 12 | 5 | 402 | 4 | 421 | 5.23e-155 | 444 |
| MS.gene055407.t1 | MTR_8g007090 | 56.635 | 422 | 155 | 12 | 5 | 402 | 4 | 421 | 4.63e-153 | 439 |
| MS.gene055407.t1 | MTR_8g007040 | 54.265 | 422 | 166 | 9 | 5 | 405 | 4 | 419 | 1.54e-147 | 426 |
| MS.gene055407.t1 | MTR_8g007065 | 55.344 | 421 | 160 | 10 | 5 | 405 | 4 | 416 | 2.67e-146 | 422 |
| MS.gene055407.t1 | MTR_8g007125 | 57.213 | 409 | 153 | 8 | 5 | 397 | 4 | 406 | 1.44e-140 | 407 |
| MS.gene055407.t1 | MTR_1g019940 | 46.582 | 395 | 173 | 9 | 22 | 383 | 10 | 399 | 4.01e-106 | 320 |
| MS.gene055407.t1 | MTR_1g019940 | 46.329 | 395 | 172 | 10 | 22 | 383 | 10 | 397 | 1.54e-103 | 313 |
| MS.gene055407.t1 | MTR_3g101410 | 46.272 | 389 | 179 | 7 | 23 | 383 | 10 | 396 | 2.88e-98 | 299 |
| MS.gene055407.t1 | MTR_3g101400 | 46.015 | 389 | 180 | 7 | 23 | 383 | 10 | 396 | 8.07e-96 | 293 |
| MS.gene055407.t1 | MTR_5g017670 | 43.750 | 384 | 186 | 10 | 31 | 385 | 14 | 396 | 2.88e-95 | 291 |
| MS.gene055407.t1 | MTR_5g017680 | 43.570 | 381 | 187 | 7 | 31 | 383 | 8 | 388 | 5.78e-95 | 290 |
| MS.gene055407.t1 | MTR_1g019940 | 44.604 | 278 | 127 | 6 | 130 | 383 | 6 | 280 | 2.99e-67 | 216 |
| MS.gene055407.t1 | MTR_1g095165 | 29.870 | 385 | 222 | 16 | 33 | 383 | 75 | 445 | 5.01e-32 | 126 |
| MS.gene055407.t1 | MTR_1g072190 | 31.489 | 235 | 144 | 7 | 35 | 254 | 32 | 264 | 3.58e-26 | 108 |
| MS.gene055407.t1 | MTR_7g094940 | 30.085 | 236 | 146 | 7 | 35 | 254 | 32 | 264 | 1.22e-22 | 99.0 |
| MS.gene055407.t1 | MTR_2g029510 | 28.729 | 362 | 219 | 14 | 33 | 383 | 69 | 402 | 3.04e-21 | 95.5 |
| MS.gene055407.t1 | MTR_0368s0010 | 30.769 | 247 | 147 | 12 | 151 | 383 | 45 | 281 | 5.76e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055407.t1 | AT4G37070 | 45.524 | 391 | 183 | 8 | 21 | 383 | 7 | 395 | 1.60e-103 | 313 |
| MS.gene055407.t1 | AT2G26560 | 47.165 | 388 | 174 | 8 | 24 | 383 | 10 | 394 | 4.27e-103 | 311 |
| MS.gene055407.t1 | AT4G37070 | 45.646 | 379 | 176 | 8 | 21 | 371 | 7 | 383 | 8.17e-100 | 302 |
| MS.gene055407.t1 | AT4G37070 | 45.646 | 379 | 176 | 8 | 21 | 371 | 7 | 383 | 8.17e-100 | 302 |
| MS.gene055407.t1 | AT4G37060 | 44.051 | 395 | 191 | 7 | 26 | 392 | 12 | 404 | 1.86e-99 | 302 |
| MS.gene055407.t1 | AT4G37060 | 40.376 | 426 | 193 | 7 | 26 | 392 | 12 | 435 | 1.48e-93 | 288 |
| MS.gene055407.t1 | AT4G37070 | 43.915 | 378 | 173 | 8 | 21 | 371 | 7 | 372 | 2.60e-93 | 285 |
| MS.gene055407.t1 | AT4G37050 | 43.622 | 392 | 187 | 8 | 26 | 383 | 28 | 419 | 2.97e-86 | 269 |
| MS.gene055407.t1 | AT5G43590 | 45.455 | 385 | 183 | 9 | 26 | 385 | 7 | 389 | 4.94e-85 | 265 |
| MS.gene055407.t1 | AT5G43590 | 45.455 | 385 | 183 | 9 | 26 | 385 | 74 | 456 | 1.10e-84 | 266 |
| MS.gene055407.t1 | AT3G54950 | 31.250 | 400 | 238 | 16 | 11 | 383 | 66 | 455 | 4.02e-37 | 141 |
| MS.gene055407.t1 | AT2G39220 | 31.989 | 372 | 221 | 15 | 33 | 383 | 108 | 468 | 2.73e-35 | 136 |
| MS.gene055407.t1 | AT3G63200 | 33.473 | 239 | 130 | 9 | 35 | 253 | 32 | 261 | 8.40e-28 | 113 |
| MS.gene055407.t1 | AT4G29800 | 29.351 | 385 | 226 | 14 | 33 | 383 | 121 | 493 | 2.90e-26 | 110 |
| MS.gene055407.t1 | AT4G29800 | 29.024 | 379 | 234 | 12 | 33 | 383 | 121 | 492 | 4.43e-25 | 107 |
Find 82 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGACAATAACAAGATTT+TGG | 0.236725 | 8.1:+86558617 | None:intergenic |
| TTAATTTCTCAGCAGCATTT+TGG | 0.243279 | 8.1:-86558548 | MS.gene055407:CDS |
| TTAAAATTTGAGAATATAAC+TGG | 0.264691 | 8.1:+86559435 | None:intergenic |
| ATCAACTTCTACAATAAATA+TGG | 0.318962 | 8.1:-86561385 | MS.gene055407:CDS |
| TGATGGTGCTGAATTCAATT+TGG | 0.328620 | 8.1:-86559215 | MS.gene055407:CDS |
| TATAGGATGTGGAGCTAAAA+TGG | 0.330220 | 8.1:-86558598 | MS.gene055407:CDS |
| AGAGGACGAGTAGGGTCATT+TGG | 0.330231 | 8.1:+86561427 | None:intergenic |
| CCACTTGGAAAAGGCTCTTC+AGG | 0.330775 | 8.1:-86562026 | MS.gene055407:intron |
| ATTGATGGTGGTGGTATTAG+AGG | 0.339376 | 8.1:-86562073 | MS.gene055407:CDS |
| TGTGGAGCTAAAATGGTTAC+AGG | 0.363590 | 8.1:-86558591 | MS.gene055407:CDS |
| TTTGCTAGTCAGCTTATTGC+TGG | 0.380190 | 8.1:-86562151 | MS.gene055407:CDS |
| GCTGAATTCAATTTGGTTGA+TGG | 0.381802 | 8.1:-86559208 | MS.gene055407:CDS |
| AAAATCTTGTTATTGTCTAT+AGG | 0.388026 | 8.1:-86558615 | MS.gene055407:CDS |
| CTAGTTTCATTGAATATTGA+AGG | 0.397004 | 8.1:+86561361 | None:intergenic |
| TTGTCTGAAGATTGGAGGCC+TGG | 0.402391 | 8.1:+86558447 | None:intergenic |
| CCCTATTACTTTGAAAATGA+TGG | 0.406023 | 8.1:-86559232 | MS.gene055407:CDS |
| TCAAAACTGGTTTGCTCAGA+AGG | 0.410182 | 8.1:+86557776 | None:intergenic |
| TATACTATACCTGAATTCTA+AGG | 0.412151 | 8.1:+86558421 | None:intergenic |
| AGACAACTACCTTAGAATTC+AGG | 0.413443 | 8.1:-86558430 | MS.gene055407:intron |
| TAAGGTAGTTGTCTGAAGAT+TGG | 0.415393 | 8.1:+86558439 | None:intergenic |
| GTGATTACATTTCCATAGGT+TGG | 0.416976 | 8.1:+86562106 | None:intergenic |
| CCTTAACTTGCAGTAGCAAA+AGG | 0.420725 | 8.1:+86557586 | None:intergenic |
| AAGTGGTCAAGAATTATTGC+TGG | 0.426493 | 8.1:+86562043 | None:intergenic |
| AAGAACTTGCCGTCATACTT+TGG | 0.438213 | 8.1:+86559552 | None:intergenic |
| TAATAGGGTGGTAGATAAGT+TGG | 0.438851 | 8.1:+86559247 | None:intergenic |
| ATCACCATTCTCAGTATTGA+TGG | 0.441301 | 8.1:-86562088 | MS.gene055407:CDS |
| TGCTGAGGCTCTTGAAAAGT+TGG | 0.441624 | 8.1:-86557701 | MS.gene055407:CDS |
| AGCAATAATTCTTGACCACT+TGG | 0.445434 | 8.1:-86562041 | MS.gene055407:CDS |
| AATTCTTGACCACTTGGAAA+AGG | 0.448564 | 8.1:-86562035 | MS.gene055407:CDS |
| GAGGACGAGTAGGGTCATTT+GGG | 0.449668 | 8.1:+86561428 | None:intergenic |
| GCAACATCTGGTCTTGCAAC+TGG | 0.461298 | 8.1:-86558525 | MS.gene055407:CDS |
| TTGGAGGCCTGGGAAGACTT+TGG | 0.463091 | 8.1:+86558458 | None:intergenic |
| ACTTCTTGATGTCAAATGTT+GGG | 0.466922 | 8.1:+86559463 | None:intergenic |
| TAGAAGTTGATTACTTCTGC+AGG | 0.477024 | 8.1:+86561397 | None:intergenic |
| GGAGTAAATAGAGGACGAGT+AGG | 0.481881 | 8.1:+86561418 | None:intergenic |
| GAGCTACCACCTCCAACCTA+TGG | 0.487732 | 8.1:-86562118 | MS.gene055407:CDS |
| CTTCAATATTCAATGAAACT+AGG | 0.502447 | 8.1:-86561360 | MS.gene055407:intron |
| AATGGTGATTACATTTCCAT+AGG | 0.502697 | 8.1:+86562102 | None:intergenic |
| TTGTTATTGTCTATAGGATG+TGG | 0.503253 | 8.1:-86558609 | MS.gene055407:CDS |
| TACCTTGCCAAAGTCTTCCC+AGG | 0.511516 | 8.1:-86558465 | MS.gene055407:CDS |
| GGATCCATCCATGGATTCCA+TGG | 0.511524 | 8.1:-86557848 | MS.gene055407:CDS |
| AACTTCTTGATGTCAAATGT+TGG | 0.516027 | 8.1:+86559462 | None:intergenic |
| TGTCTGAAGATTGGAGGCCT+GGG | 0.518431 | 8.1:+86558448 | None:intergenic |
| AAATGTTGGGATTACTACAT+TGG | 0.518986 | 8.1:+86559476 | None:intergenic |
| ACCACCATCAATACTGAGAA+TGG | 0.522131 | 8.1:+86562084 | None:intergenic |
| GTGATAGCTGGGACTAGCAC+TGG | 0.525514 | 8.1:-86561484 | MS.gene055407:CDS |
| TGCTTGTGTAGCATTATCCA+TGG | 0.528981 | 8.1:+86557831 | None:intergenic |
| TTGAACATTATACAGTGGTT+GGG | 0.529201 | 8.1:-86559592 | MS.gene055407:intron |
| TTGCCGTCATACTTTGGACC+CGG | 0.533505 | 8.1:+86559558 | None:intergenic |
| TTGATGGTGGTGGTATTAGA+GGG | 0.533729 | 8.1:-86562072 | MS.gene055407:CDS |
| TTAGAAAATCTTGCAAAGGT+AGG | 0.537048 | 8.1:-86557805 | MS.gene055407:CDS |
| AGCATTATCCATGGAATCCA+TGG | 0.538932 | 8.1:+86557840 | None:intergenic |
| CTTAACTTGCAGTAGCAAAA+GGG | 0.540262 | 8.1:+86557587 | None:intergenic |
| AAATTGTCAGATATATGCAT+TGG | 0.540624 | 8.1:-86559283 | MS.gene055407:CDS |
| ATTACATTTCCATAGGTTGG+AGG | 0.542243 | 8.1:+86562109 | None:intergenic |
| ACTTCTGCAGGAGTAAATAG+AGG | 0.549216 | 8.1:+86561409 | None:intergenic |
| TAATGTGTAGGAATATAACT+TGG | 0.549716 | 8.1:-86557869 | MS.gene055407:intron |
| GGTAGTTGTCTGAAGATTGG+AGG | 0.556190 | 8.1:+86558442 | None:intergenic |
| AGGTGTGGCTGCATGTAATC+CGG | 0.561900 | 8.1:-86559185 | MS.gene055407:intron |
| ACATTTCCATAGGTTGGAGG+TGG | 0.563266 | 8.1:+86562112 | None:intergenic |
| AAGTGATAAATCAGCAGAAG+GGG | 0.566674 | 8.1:-86558647 | MS.gene055407:CDS |
| CAATTTGGTTGATGGAGGTG+TGG | 0.567512 | 8.1:-86559200 | MS.gene055407:CDS |
| TGCCGTCATACTTTGGACCC+GGG | 0.573615 | 8.1:+86559559 | None:intergenic |
| TGAAGTGATAAATCAGCAGA+AGG | 0.579980 | 8.1:-86558649 | MS.gene055407:CDS |
| ATATAACTTGGATCCATCCA+TGG | 0.582027 | 8.1:-86557857 | MS.gene055407:CDS |
| CGAGTAGGGTCATTTGGGTG+AGG | 0.582448 | 8.1:+86561433 | None:intergenic |
| GAGTAAATAGAGGACGAGTA+GGG | 0.588277 | 8.1:+86561419 | None:intergenic |
| TGGTTGGGATGCTACATACC+CGG | 0.590159 | 8.1:-86559577 | MS.gene055407:CDS |
| ATTCTCAGTATTGATGGTGG+TGG | 0.592026 | 8.1:-86562082 | MS.gene055407:CDS |
| GATAAATCAGCAGAAGGGGA+AGG | 0.597486 | 8.1:-86558643 | MS.gene055407:CDS |
| AATGTGATAGTTTCAAGAAG+TGG | 0.598372 | 8.1:+86557610 | None:intergenic |
| GAAGTGATAAATCAGCAGAA+GGG | 0.599216 | 8.1:-86558648 | MS.gene055407:CDS |
| GAATTCAATTTGGTTGATGG+AGG | 0.600308 | 8.1:-86559205 | MS.gene055407:CDS |
| AAACTTAGAAAATCTTGCAA+AGG | 0.605492 | 8.1:-86557809 | MS.gene055407:CDS |
| TTATCCATGGAATCCATGGA+TGG | 0.623832 | 8.1:+86557844 | None:intergenic |
| GGTTGGGATGCTACATACCC+GGG | 0.628193 | 8.1:-86559576 | MS.gene055407:CDS |
| TGTAGATACCAATGTGCCAG+AGG | 0.633921 | 8.1:-86557746 | MS.gene055407:CDS |
| TACCCGGGTCCAAAGTATGA+CGG | 0.646210 | 8.1:-86559561 | MS.gene055407:CDS |
| GTGGAGCTAAAATGGTTACA+GGG | 0.657226 | 8.1:-86558590 | MS.gene055407:CDS |
| ACCATTCTCAGTATTGATGG+TGG | 0.665174 | 8.1:-86562085 | MS.gene055407:CDS |
| GGCCTGGGAAGACTTTGGCA+AGG | 0.667341 | 8.1:+86558463 | None:intergenic |
| ATAGCTGGGACTAGCACTGG+AGG | 0.681155 | 8.1:-86561481 | MS.gene055407:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTTTCTTGAATTAA+GGG | - | chr8.1:86559754-86559773 | MS.gene055407:intron | 10.0% |
| !!! | ACATTATTTTTAATCTATAT+AGG | + | chr8.1:86560042-86560061 | None:intergenic | 10.0% |
| !!! | ATTTAGCATTATTTTTTTTT+TGG | + | chr8.1:86560838-86560857 | None:intergenic | 10.0% |
| !!! | CATTATTTTTAATCTATATA+GGG | + | chr8.1:86560041-86560060 | None:intergenic | 10.0% |
| !!! | TAATTTATTTTCTTGAATTA+AGG | - | chr8.1:86559753-86559772 | MS.gene055407:intron | 10.0% |
| !!! | TAATTTTTTTATTATAATCC+AGG | - | chr8.1:86558866-86558885 | MS.gene055407:intron | 10.0% |
| !!! | TATTTTCTTTATTTCATTTA+TGG | + | chr8.1:86558669-86558688 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAGATAAATACA+AGG | + | chr8.1:86559140-86559159 | None:intergenic | 10.0% |
| !! | AATAGTTCTTTATCATAATT+TGG | - | chr8.1:86558685-86558704 | MS.gene055407:intron | 15.0% |
| !! | AATGATAAAAAAAATAGAAG+AGG | - | chr8.1:86558836-86558855 | MS.gene055407:intron | 15.0% |
| !! | ATAAATTGATTATCATAGAA+CGG | + | chr8.1:86558618-86558637 | None:intergenic | 15.0% |
| !! | ATAATGAGTTAATTAATTAC+CGG | + | chr8.1:86560609-86560628 | None:intergenic | 15.0% |
| !! | CAAATGATAAATAGTAAAAT+AGG | + | chr8.1:86559278-86559297 | None:intergenic | 15.0% |
| !! | TCAAGAAAATAAATTATAGT+GGG | + | chr8.1:86559749-86559768 | None:intergenic | 15.0% |
| !! | TGCTAAATATATGTTATAAA+TGG | - | chr8.1:86560850-86560869 | MS.gene055407:intron | 15.0% |
| !! | TTAAAATTTGAGAATATAAC+TGG | + | chr8.1:86560340-86560359 | None:intergenic | 15.0% |
| !! | TTAAACTAAGAGAAAATAAA+AGG | - | chr8.1:86558578-86558597 | MS.gene055407:CDS | 15.0% |
| !! | TTCAAGAAAATAAATTATAG+TGG | + | chr8.1:86559750-86559769 | None:intergenic | 15.0% |
| !!! | AAAGTGCATTTAATTTTAAT+TGG | + | chr8.1:86559894-86559913 | None:intergenic | 15.0% |
| !!! | AACTTATTAATGTTTTTTTG+AGG | - | chr8.1:86560139-86560158 | MS.gene055407:intron | 15.0% |
| !!! | AGTTATATTCTCAAATTTTA+AGG | - | chr8.1:86560339-86560358 | MS.gene055407:intron | 15.0% |
| !!! | ATATAGCAGATATTTTAATT+TGG | - | chr8.1:86558209-86558228 | MS.gene055407:intron | 15.0% |
| !!! | CATTTAATTTTAATTGGAAA+TGG | + | chr8.1:86559888-86559907 | None:intergenic | 15.0% |
| !!! | TGATAAAATTAGTTTGAATT+TGG | + | chr8.1:86561766-86561785 | None:intergenic | 15.0% |
| !! | AAATAATTAATCTGTGTTTG+TGG | - | chr8.1:86559315-86559334 | MS.gene055407:intron | 20.0% |
| !! | AAATTGATCATGGAAAAATT+GGG | - | chr8.1:86562135-86562154 | MS.gene055407:CDS | 20.0% |
| !! | ACAAACACAGATTAATTATT+TGG | + | chr8.1:86559316-86559335 | None:intergenic | 20.0% |
| !! | ATACATGTTTGGATAAAAAT+GGG | + | chr8.1:86559803-86559822 | None:intergenic | 20.0% |
| !! | ATAGGAAATATGATTATAAC+AGG | + | chr8.1:86559260-86559279 | None:intergenic | 20.0% |
| !! | ATCAACTTCTACAATAAATA+TGG | - | chr8.1:86558387-86558406 | MS.gene055407:intron | 20.0% |
| !! | CAGATTAATTATTTGGATTT+AGG | + | chr8.1:86559309-86559328 | None:intergenic | 20.0% |
| !! | TAAATTGATTATCATAGAAC+GGG | + | chr8.1:86558617-86558636 | None:intergenic | 20.0% |
| !! | TAGGAAATATGATTATAACA+GGG | + | chr8.1:86559259-86559278 | None:intergenic | 20.0% |
| !! | TATTAAAGTGATCAATTCTT+TGG | - | chr8.1:86559712-86559731 | MS.gene055407:intron | 20.0% |
| !! | TGGGTATTAAAAAAAAATTG+AGG | + | chr8.1:86558946-86558965 | None:intergenic | 20.0% |
| !! | TTATAATATTGTCACAAACA+AGG | - | chr8.1:86560657-86560676 | MS.gene055407:intron | 20.0% |
| !!! | AAAATCTTGTTATTGTCTAT+AGG | - | chr8.1:86561157-86561176 | MS.gene055407:intron | 20.0% |
| !!! | AAATCTCATGATTTTTTTAC+GGG | - | chr8.1:86558710-86558729 | MS.gene055407:intron | 20.0% |
| !!! | AAATTGAATGATTTTACTCA+AGG | - | chr8.1:86560754-86560773 | MS.gene055407:intron | 20.0% |
| !!! | AAATTTTTTTTTTTGAGGGA+AGG | + | chr8.1:86557815-86557834 | None:intergenic | 20.0% |
| !!! | AACATGATTTTATATAACCT+CGG | + | chr8.1:86557933-86557952 | None:intergenic | 20.0% |
| !!! | CAAATCTCATGATTTTTTTA+CGG | - | chr8.1:86558709-86558728 | MS.gene055407:intron | 20.0% |
| !!! | TACTTCATGTATTTTTGTTT+TGG | + | chr8.1:86559449-86559468 | None:intergenic | 20.0% |
| !!! | TATAGACAATAACAAGATTT+TGG | + | chr8.1:86561158-86561177 | None:intergenic | 20.0% |
| ! | AAAATCACAATCAAAATCGA+TGG | - | chr8.1:86560910-86560929 | MS.gene055407:intron | 25.0% |
| ! | AAACTTAGAAAATCTTGCAA+AGG | - | chr8.1:86561963-86561982 | MS.gene055407:intron | 25.0% |
| ! | AAATTGTCAGATATATGCAT+TGG | - | chr8.1:86560489-86560508 | MS.gene055407:intron | 25.0% |
| ! | AACAATGATTAGATTGAGAT+CGG | + | chr8.1:86561517-86561536 | None:intergenic | 25.0% |
| ! | ATATACTATTGAACTTGATG+CGG | + | chr8.1:86559987-86560006 | None:intergenic | 25.0% |
| ! | CATACATGTTTGGATAAAAA+TGG | + | chr8.1:86559804-86559823 | None:intergenic | 25.0% |
| ! | CATCAAGTTCAATAGTATAT+TGG | - | chr8.1:86559987-86560006 | MS.gene055407:intron | 25.0% |
| ! | CATTCATTAAATAATGCATG+TGG | + | chr8.1:86559646-86559665 | None:intergenic | 25.0% |
| ! | CTAGTTTCATTGAATATTGA+AGG | + | chr8.1:86558414-86558433 | None:intergenic | 25.0% |
| ! | CTTCAATATTCAATGAAACT+AGG | - | chr8.1:86558412-86558431 | MS.gene055407:intron | 25.0% |
| ! | GAAATTGATCATGGAAAAAT+TGG | - | chr8.1:86562134-86562153 | MS.gene055407:CDS | 25.0% |
| ! | GGGTATTAAAAAAAAATTGG+AGG | + | chr8.1:86558982-86559001 | None:intergenic | 25.0% |
| ! | TAATCCTTCATCTTACAAAT+CGG | - | chr8.1:86560084-86560103 | MS.gene055407:intron | 25.0% |
| ! | TAATGTGTAGGAATATAACT+TGG | - | chr8.1:86561903-86561922 | MS.gene055407:intron | 25.0% |
| ! | TAATGTTGAACATTATACAG+TGG | - | chr8.1:86560175-86560194 | MS.gene055407:intron | 25.0% |
| ! | TATACTATACCTGAATTCTA+AGG | + | chr8.1:86561354-86561373 | None:intergenic | 25.0% |
| ! | TATCTGCTATATATTTGAAC+AGG | + | chr8.1:86558201-86558220 | None:intergenic | 25.0% |
| ! | TCTCAAAGAGACTAAAATAT+GGG | - | chr8.1:86558746-86558765 | MS.gene055407:intron | 25.0% |
| ! | TCTGAAAAAGAAATTGATCA+TGG | - | chr8.1:86562125-86562144 | MS.gene055407:CDS | 25.0% |
| ! | TGCAAACAGATCTTATATAT+AGG | + | chr8.1:86561644-86561663 | None:intergenic | 25.0% |
| !! | ACATGATTTTATATAACCTC+GGG | + | chr8.1:86557932-86557951 | None:intergenic | 25.0% |
| !! | ACCATCATTTTCAAAGTAAT+AGG | + | chr8.1:86560544-86560563 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | + | chr8.1:86559572-86559591 | None:intergenic | 25.0% |
| !! | CCATCATTTTCAAAGTAATA+GGG | + | chr8.1:86560543-86560562 | None:intergenic | 25.0% |
| !! | GGTCACAATTACAAATATTT+TGG | - | chr8.1:86558799-86558818 | MS.gene055407:intron | 25.0% |
| !! | TCTACATTCATTTTCAAAAC+TGG | + | chr8.1:86562012-86562031 | None:intergenic | 25.0% |
| !!! | AAGATACCGATTTTGAAATA+TGG | - | chr8.1:86561486-86561505 | MS.gene055407:CDS | 25.0% |
| !!! | AATTTTGATTGCGATTTTAC+GGG | + | chr8.1:86560739-86560758 | None:intergenic | 25.0% |
| !!! | CAATTTTGATTGCGATTTTA+CGG | + | chr8.1:86560740-86560759 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTCACACAGTT+AGG | + | chr8.1:86561543-86561562 | None:intergenic | 25.0% |
| !!! | TGGGGGTATTAAAAAAAAAT+TGG | + | chr8.1:86558985-86559004 | None:intergenic | 25.0% |
| AAAATCGCAATCAAAATCGA+TGG | - | chr8.1:86560806-86560825 | MS.gene055407:intron | 30.0% | |
| AAATGTTGGGATTACTACAT+TGG | + | chr8.1:86560299-86560318 | None:intergenic | 30.0% | |
| AACTTCTTGATGTCAAATGT+TGG | + | chr8.1:86560313-86560332 | None:intergenic | 30.0% | |
| AATAGTATATTGGATGTGAG+TGG | - | chr8.1:86559997-86560016 | MS.gene055407:intron | 30.0% | |
| AATGATCGATCTTAATGTGT+AGG | - | chr8.1:86561891-86561910 | MS.gene055407:intron | 30.0% | |
| AATGGTGATTACATTTCCAT+AGG | + | chr8.1:86557673-86557692 | None:intergenic | 30.0% | |
| AATGTGATAGTTTCAAGAAG+TGG | + | chr8.1:86562165-86562184 | None:intergenic | 30.0% | |
| ACAAACAAGGTTGTCAAAAT+CGG | - | chr8.1:86560670-86560689 | MS.gene055407:intron | 30.0% | |
| ACTACAAACAAATGACAGTT+TGG | + | chr8.1:86561735-86561754 | None:intergenic | 30.0% | |
| ACTTCTTGATGTCAAATGTT+GGG | + | chr8.1:86560312-86560331 | None:intergenic | 30.0% | |
| CAAAAACGAACACAAACAAA+AGG | + | chr8.1:86557605-86557624 | None:intergenic | 30.0% | |
| CCATAGTAGAATCTCAAAAT+AGG | + | chr8.1:86560942-86560961 | None:intergenic | 30.0% | |
| CTAATTCTAATAGGCCTAAA+AGG | + | chr8.1:86559033-86559052 | None:intergenic | 30.0% | |
| GACAGTCCATATTTCAAAAT+CGG | + | chr8.1:86561495-86561514 | None:intergenic | 30.0% | |
| GGGGTTAAATTCTACATAAT+TGG | + | chr8.1:86558061-86558080 | None:intergenic | 30.0% | |
| GTCTCAAAGAGACTAAAATA+TGG | - | chr8.1:86558745-86558764 | MS.gene055407:intron | 30.0% | |
| GTCTGCAAGATATGATAATT+TGG | + | chr8.1:86561088-86561107 | None:intergenic | 30.0% | |
| GTGTGTGAATAGTTAGAATA+TGG | + | chr8.1:86557987-86558006 | None:intergenic | 30.0% | |
| TAAAACAAGAGGACAGAAAA+TGG | + | chr8.1:86559009-86559028 | None:intergenic | 30.0% | |
| TAAAATATGGGTATACTCCA+AGG | - | chr8.1:86558758-86558777 | MS.gene055407:intron | 30.0% | |
| TATGATGTGACATACATGTT+TGG | + | chr8.1:86559814-86559833 | None:intergenic | 30.0% | |
| TTAGAAAATCTTGCAAAGGT+AGG | - | chr8.1:86561967-86561986 | MS.gene055407:intron | 30.0% | |
| TTGAACATTATACAGTGGTT+GGG | - | chr8.1:86560180-86560199 | MS.gene055407:intron | 30.0% | |
| ! | AGAGAGTATATTTAGTGCAT+AGG | + | chr8.1:86561616-86561635 | None:intergenic | 30.0% |
| ! | ATAAAAATGGGATTAGTGAC+GGG | + | chr8.1:86559791-86559810 | None:intergenic | 30.0% |
| ! | CATTAGAACGTTTTGTACAT+GGG | + | chr8.1:86561875-86561894 | None:intergenic | 30.0% |
| ! | CCCTATTACTTTGAAAATGA+TGG | - | chr8.1:86560540-86560559 | MS.gene055407:intron | 30.0% |
| ! | CTTTTAGGCCTATTAGAATT+AGG | - | chr8.1:86559031-86559050 | MS.gene055407:intron | 30.0% |
| ! | GACTTTTGTAGAATCGATAT+AGG | - | chr8.1:86560776-86560795 | MS.gene055407:intron | 30.0% |
| ! | GATAAAAATGGGATTAGTGA+CGG | + | chr8.1:86559792-86559811 | None:intergenic | 30.0% |
| ! | TAATTTCTCAGCAGCATTTT+GGG | - | chr8.1:86561225-86561244 | MS.gene055407:intron | 30.0% |
| ! | TATCTGACAATTTTGCATCT+TGG | + | chr8.1:86560482-86560501 | None:intergenic | 30.0% |
| ! | TCATTAGAACGTTTTGTACA+TGG | + | chr8.1:86561876-86561895 | None:intergenic | 30.0% |
| ! | TCATTTTCAAAGTAATAGGG+TGG | + | chr8.1:86560540-86560559 | None:intergenic | 30.0% |
| ! | TTAATTTCTCAGCAGCATTT+TGG | - | chr8.1:86561224-86561243 | MS.gene055407:intron | 30.0% |
| ! | TTGTTATTGTCTATAGGATG+TGG | - | chr8.1:86561163-86561182 | MS.gene055407:intron | 30.0% |
| ! | TTTTTATTATAATCCAGGCC+CGG | - | chr8.1:86558871-86558890 | MS.gene055407:intron | 30.0% |
| !! | AATCATTTTGATGTGATAGC+TGG | - | chr8.1:86558276-86558295 | MS.gene055407:intron | 30.0% |
| !! | ATAACCGATTTGTAAGATGA+AGG | + | chr8.1:86560091-86560110 | None:intergenic | 30.0% |
| !! | ATCATTTTGATGTGATAGCT+GGG | - | chr8.1:86558277-86558296 | MS.gene055407:intron | 30.0% |
| !!! | CCTATTTTGAGATTCTACTA+TGG | - | chr8.1:86560939-86560958 | MS.gene055407:intron | 30.0% |
| !!! | CTGGATTTTAGGATTTAAGT+CGG | - | chr8.1:86560997-86561016 | MS.gene055407:intron | 30.0% |
| !!! | TGGATTTTAGGATTTAAGTC+GGG | - | chr8.1:86560998-86561017 | MS.gene055407:intron | 30.0% |
| AAAAAATTGAGGTCCATGAC+TGG | + | chr8.1:86558935-86558954 | None:intergenic | 35.0% | |
| AAAAATTGAGGTCCATGACT+GGG | + | chr8.1:86558934-86558953 | None:intergenic | 35.0% | |
| AAACCAAGGTAAAAATGCTG+AGG | - | chr8.1:86562056-86562075 | MS.gene055407:CDS | 35.0% | |
| AAATGACTACCGTATACATG+AGG | + | chr8.1:86559086-86559105 | None:intergenic | 35.0% | |
| AAGAGGTGGGAAAATGATAA+AGG | - | chr8.1:86558099-86558118 | MS.gene055407:intron | 35.0% | |
| AAGTGATAAATCAGCAGAAG+GGG | - | chr8.1:86561125-86561144 | MS.gene055407:intron | 35.0% | |
| AAGTGGTCAAGAATTATTGC+TGG | + | chr8.1:86557732-86557751 | None:intergenic | 35.0% | |
| AATGCACTTTGCTTAGTAGT+AGG | - | chr8.1:86559904-86559923 | MS.gene055407:intron | 35.0% | |
| AATTCTTGACCACTTGGAAA+AGG | - | chr8.1:86557737-86557756 | MS.gene055407:CDS | 35.0% | |
| AGACAACTACCTTAGAATTC+AGG | - | chr8.1:86561342-86561361 | MS.gene055407:intron | 35.0% | |
| AGCAATAATTCTTGACCACT+TGG | - | chr8.1:86557731-86557750 | MS.gene055407:CDS | 35.0% | |
| ATATAACTTGGATCCATCCA+TGG | - | chr8.1:86561915-86561934 | MS.gene055407:intron | 35.0% | |
| ATGCACTTTGCTTAGTAGTA+GGG | - | chr8.1:86559905-86559924 | MS.gene055407:intron | 35.0% | |
| ATTGATTATCATAGAACGGG+AGG | + | chr8.1:86558614-86558633 | None:intergenic | 35.0% | |
| CAAACAAGGTTGTCAAAATC+GGG | - | chr8.1:86560671-86560690 | MS.gene055407:intron | 35.0% | |
| CAAGAGGACCTAATTCTAAT+AGG | + | chr8.1:86559042-86559061 | None:intergenic | 35.0% | |
| CCAGAGGAAAAAATAAACCA+AGG | - | chr8.1:86562042-86562061 | MS.gene055407:CDS | 35.0% | |
| CGACTTAAATCCTAAAATCC+AGG | + | chr8.1:86560999-86561018 | None:intergenic | 35.0% | |
| CTATTCACACACACTTTCAA+TGG | - | chr8.1:86557995-86558014 | MS.gene055407:intron | 35.0% | |
| CTTGTGTATTTGCACATTGA+GGG | + | chr8.1:86558082-86558101 | None:intergenic | 35.0% | |
| GAAGTGATAAATCAGCAGAA+GGG | - | chr8.1:86561124-86561143 | MS.gene055407:intron | 35.0% | |
| GAGATTTGAATTATAACCCG+AGG | - | chr8.1:86557913-86557932 | MS.gene055407:intron | 35.0% | |
| GCTGAATTCAATTTGGTTGA+TGG | - | chr8.1:86560564-86560583 | MS.gene055407:intron | 35.0% | |
| GGATTCGACCATCTTAAAAT+TGG | + | chr8.1:86559509-86559528 | None:intergenic | 35.0% | |
| GTAAACTTTGTTCATGCAGT+TGG | - | chr8.1:86560443-86560462 | MS.gene055407:intron | 35.0% | |
| GTGATTACATTTCCATAGGT+TGG | + | chr8.1:86557669-86557688 | None:intergenic | 35.0% | |
| GTTGAACATTATACAGTGGT+TGG | - | chr8.1:86560179-86560198 | MS.gene055407:intron | 35.0% | |
| TAAGGTAGTTGTCTGAAGAT+TGG | + | chr8.1:86561336-86561355 | None:intergenic | 35.0% | |
| TAATAGGGTGGTAGATAAGT+TGG | + | chr8.1:86560528-86560547 | None:intergenic | 35.0% | |
| TATAGGATGTGGAGCTAAAA+TGG | - | chr8.1:86561174-86561193 | MS.gene055407:intron | 35.0% | |
| TCAATGTGCAAATACACAAG+AGG | - | chr8.1:86558082-86558101 | MS.gene055407:intron | 35.0% | |
| TCACTTTAATATACACCCTC+TGG | + | chr8.1:86559703-86559722 | None:intergenic | 35.0% | |
| TCTTACAAATCGGTTATGCA+AGG | - | chr8.1:86560094-86560113 | MS.gene055407:intron | 35.0% | |
| TCTTGTGTATTTGCACATTG+AGG | + | chr8.1:86558083-86558102 | None:intergenic | 35.0% | |
| TGAAGTGATAAATCAGCAGA+AGG | - | chr8.1:86561123-86561142 | MS.gene055407:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | chr8.1:86559685-86559704 | MS.gene055407:intron | 35.0% | |
| TTATCATATCTTGCAGACGT+TGG | - | chr8.1:86561090-86561109 | MS.gene055407:intron | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | - | chr8.1:86559684-86559703 | MS.gene055407:intron | 35.0% | |
| TTGTGTATTTGCACATTGAG+GGG | + | chr8.1:86558081-86558100 | None:intergenic | 35.0% | |
| ! | ATCACCATTCTCAGTATTGA+TGG | - | chr8.1:86557684-86557703 | MS.gene055407:CDS | 35.0% |
| ! | ATCGCAAAATCCTGGATTTT+AGG | - | chr8.1:86560986-86561005 | MS.gene055407:intron | 35.0% |
| ! | ATTACATTTCCATAGGTTGG+AGG | + | chr8.1:86557666-86557685 | None:intergenic | 35.0% |
| ! | CAAAATCGGGACTTTATTTC+TGG | - | chr8.1:86560684-86560703 | MS.gene055407:intron | 35.0% |
| ! | TAGAAGTTGATTACTTCTGC+AGG | + | chr8.1:86558378-86558397 | None:intergenic | 35.0% |
| ! | TGATGGTGCTGAATTCAATT+TGG | - | chr8.1:86560557-86560576 | MS.gene055407:intron | 35.0% |
| !! | ATGGTTCTAAGAGTTGTCAT+CGG | + | chr8.1:86557968-86557987 | None:intergenic | 35.0% |
| !! | GAATTCAATTTGGTTGATGG+AGG | - | chr8.1:86560567-86560586 | MS.gene055407:intron | 35.0% |
| !! | GACTTTATTTCTGGTCGAAA+GGG | - | chr8.1:86560693-86560712 | MS.gene055407:intron | 35.0% |
| !! | TACAAGGTGTCGTATATATG+CGG | + | chr8.1:86559124-86559143 | None:intergenic | 35.0% |
| !!! | CCTTGGTTTATTTTTTCCTC+TGG | + | chr8.1:86562045-86562064 | None:intergenic | 35.0% |
| !!! | TATTTTTTCCTCTGGCACAT+TGG | + | chr8.1:86562037-86562056 | None:intergenic | 35.0% |
| !!! | TCCTCTTGTTTTAGCCTTTT+AGG | - | chr8.1:86559016-86559035 | MS.gene055407:intron | 35.0% |
| AAAATTGAGGTCCATGACTG+GGG | + | chr8.1:86558933-86558952 | None:intergenic | 40.0% | |
| AACCCATCCATTCAAAGAGA+AGG | - | chr8.1:86559480-86559499 | MS.gene055407:CDS | 40.0% | |
| AACTTTGTTCATGCAGTTGG+AGG | - | chr8.1:86560446-86560465 | MS.gene055407:intron | 40.0% | |
| AAGAACTTGCCGTCATACTT+TGG | + | chr8.1:86560223-86560242 | None:intergenic | 40.0% | |
| AAGAGGACAGAAAATGGTTG+GGG | + | chr8.1:86559003-86559022 | None:intergenic | 40.0% | |
| ACAAGAGGACAGAAAATGGT+TGG | + | chr8.1:86559005-86559024 | None:intergenic | 40.0% | |
| ACAGTAGCATGCAATGCAAA+AGG | + | chr8.1:86558150-86558169 | None:intergenic | 40.0% | |
| ACCACCATCAATACTGAGAA+TGG | + | chr8.1:86557691-86557710 | None:intergenic | 40.0% | |
| ACCCATCCATTCAAAGAGAA+GGG | - | chr8.1:86559481-86559500 | MS.gene055407:CDS | 40.0% | |
| ACTCCAATTGAGTGCACAAA+AGG | - | chr8.1:86559396-86559415 | MS.gene055407:intron | 40.0% | |
| ACTTCTGCAGGAGTAAATAG+AGG | + | chr8.1:86558366-86558385 | None:intergenic | 40.0% | |
| AGCATTATCCATGGAATCCA+TGG | + | chr8.1:86561935-86561954 | None:intergenic | 40.0% | |
| ATGACCACAAAATTGAGTGC+TGG | + | chr8.1:86561408-86561427 | None:intergenic | 40.0% | |
| ATGTGCAAATACACAAGAGG+TGG | - | chr8.1:86558085-86558104 | MS.gene055407:intron | 40.0% | |
| ATTGAGTGCACAAAAGGTGA+AGG | - | chr8.1:86559402-86559421 | MS.gene055407:intron | 40.0% | |
| CAAGAGGACAGAAAATGGTT+GGG | + | chr8.1:86559004-86559023 | None:intergenic | 40.0% | |
| CTATGGATTTGAGTCGTTGA+AGG | - | chr8.1:86560956-86560975 | MS.gene055407:intron | 40.0% | |
| GAGTAAATAGAGGACGAGTA+GGG | + | chr8.1:86558356-86558375 | None:intergenic | 40.0% | |
| GCCTAAAAGGCTAAAACAAG+AGG | + | chr8.1:86559020-86559039 | None:intergenic | 40.0% | |
| GGTGATGTATGCAAGGATAA+AGG | + | chr8.1:86558129-86558148 | None:intergenic | 40.0% | |
| GTGAAGAAATCGCAAAATCC+TGG | - | chr8.1:86560978-86560997 | MS.gene055407:intron | 40.0% | |
| GTGGAGCTAAAATGGTTACA+GGG | - | chr8.1:86561182-86561201 | MS.gene055407:intron | 40.0% | |
| TATATATGCGGTACACCCAA+AGG | + | chr8.1:86559112-86559131 | None:intergenic | 40.0% | |
| TCTGGTCGAAAGGGAATTAA+TGG | - | chr8.1:86560702-86560721 | MS.gene055407:intron | 40.0% | |
| TGACCACAAAATTGAGTGCT+GGG | + | chr8.1:86561407-86561426 | None:intergenic | 40.0% | |
| TGCAAAAGGTGATGTATGCA+AGG | + | chr8.1:86558136-86558155 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8.1:86559568-86559587 | None:intergenic | 40.0% | |
| TGCTTGTGTAGCATTATCCA+TGG | + | chr8.1:86561944-86561963 | None:intergenic | 40.0% | |
| TGTGCAAATACACAAGAGGT+GGG | - | chr8.1:86558086-86558105 | MS.gene055407:intron | 40.0% | |
| TGTGGAGCTAAAATGGTTAC+AGG | - | chr8.1:86561181-86561200 | MS.gene055407:intron | 40.0% | |
| TGTGTATTTGCACATTGAGG+GGG | + | chr8.1:86558080-86558099 | None:intergenic | 40.0% | |
| TTATCCATGGAATCCATGGA+TGG | + | chr8.1:86561931-86561950 | None:intergenic | 40.0% | |
| TTGAATTAAGGGAAGACCCA+TGG | - | chr8.1:86559765-86559784 | MS.gene055407:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8.1:86559569-86559588 | None:intergenic | 40.0% | |
| TTTGCTAGTCAGCTTATTGC+TGG | - | chr8.1:86557621-86557640 | MS.gene055407:CDS | 40.0% | |
| ! | ATTCCCAGCACTCAATTTTG+TGG | - | chr8.1:86561401-86561420 | MS.gene055407:CDS | 40.0% |
| ! | GAATTAGGTCCTCTTGCTTT+TGG | - | chr8.1:86559046-86559065 | MS.gene055407:intron | 40.0% |
| ! | GACAATTTTGCATCTTGGCT+GGG | + | chr8.1:86560477-86560496 | None:intergenic | 40.0% |
| ! | GCACTCAATTTTGTGGTCAT+TGG | - | chr8.1:86561408-86561427 | MS.gene055407:CDS | 40.0% |
| ! | TCACCTTTTGTGCACTCAAT+TGG | + | chr8.1:86559402-86559421 | None:intergenic | 40.0% |
| ! | TGACAATTTTGCATCTTGGC+TGG | + | chr8.1:86560478-86560497 | None:intergenic | 40.0% |
| !! | ACCATTCTCAGTATTGATGG+TGG | - | chr8.1:86557687-86557706 | MS.gene055407:CDS | 40.0% |
| !! | ACGGTAGTCATTTTCACCTT+TGG | - | chr8.1:86559093-86559112 | MS.gene055407:intron | 40.0% |
| !! | AGTCGGGATTTTGACAACAA+TGG | - | chr8.1:86561014-86561033 | MS.gene055407:intron | 40.0% |
| !! | ATTCTCAGTATTGATGGTGG+TGG | - | chr8.1:86557690-86557709 | MS.gene055407:CDS | 40.0% |
| !! | ATTGATGGTGGTGGTATTAG+AGG | - | chr8.1:86557699-86557718 | MS.gene055407:CDS | 40.0% |
| !! | CGGTAGTCATTTTCACCTTT+GGG | - | chr8.1:86559094-86559113 | MS.gene055407:intron | 40.0% |
| !! | GAAGGGGACCAATTTTAAGA+TGG | - | chr8.1:86559498-86559517 | MS.gene055407:CDS | 40.0% |
| !! | GGACTTTATTTCTGGTCGAA+AGG | - | chr8.1:86560692-86560711 | MS.gene055407:intron | 40.0% |
| !! | TCAAAACTGGTTTGCTCAGA+AGG | + | chr8.1:86561999-86562018 | None:intergenic | 40.0% |
| !! | TCGGCTTTGGGAATGAAAAT+AGG | + | chr8.1:86559215-86559234 | None:intergenic | 40.0% |
| !! | TTGATGGTGGTGGTATTAGA+GGG | - | chr8.1:86557700-86557719 | MS.gene055407:CDS | 40.0% |
| !!! | TCTTGCTTTTGGTGTTAGGT+GGG | - | chr8.1:86559057-86559076 | MS.gene055407:intron | 40.0% |
| AAATTGAGGTCCATGACTGG+GGG | + | chr8.1:86558932-86558951 | None:intergenic | 45.0% | |
| AGAGGACAGAAAATGGTTGG+GGG | + | chr8.1:86559002-86559021 | None:intergenic | 45.0% | |
| AGGAACCAATATACACCCTC+CGG | - | chr8.1:86559550-86559569 | MS.gene055407:CDS | 45.0% | |
| AGGACCAAGAACAAGACATG+TGG | - | chr8.1:86558778-86558797 | MS.gene055407:intron | 45.0% | |
| CACCTAACACCAAAAGCAAG+AGG | + | chr8.1:86559058-86559077 | None:intergenic | 45.0% | |
| CCCATCCATTCAAAGAGAAG+GGG | - | chr8.1:86559482-86559501 | MS.gene055407:CDS | 45.0% | |
| CCCCTTCTCTTTGAATGGAT+GGG | + | chr8.1:86559485-86559504 | None:intergenic | 45.0% | |
| GAGCCTCCGAATTCTTAGAA+CGG | - | chr8.1:86559233-86559252 | MS.gene055407:CDS | 45.0% | |
| GATAAATCAGCAGAAGGGGA+AGG | - | chr8.1:86561129-86561148 | MS.gene055407:intron | 45.0% | |
| GCAAATCAACTAGTGGCTCA+TGG | + | chr8.1:86559530-86559549 | None:intergenic | 45.0% | |
| GGAGTAAATAGAGGACGAGT+AGG | + | chr8.1:86558357-86558376 | None:intergenic | 45.0% | |
| GGTAGTTGTCTGAAGATTGG+AGG | + | chr8.1:86561333-86561352 | None:intergenic | 45.0% | |
| GGTTCCTGCAAATCAACTAG+TGG | + | chr8.1:86559537-86559556 | None:intergenic | 45.0% | |
| TCCCCTTCTCTTTGAATGGA+TGG | + | chr8.1:86559486-86559505 | None:intergenic | 45.0% | |
| TGCTGAGGCTCTTGAAAAGT+TGG | - | chr8.1:86562071-86562090 | MS.gene055407:CDS | 45.0% | |
| TGGAGGACAGTAGTACTAGT+GGG | + | chr8.1:86558965-86558984 | None:intergenic | 45.0% | |
| TGTAGATACCAATGTGCCAG+AGG | - | chr8.1:86562026-86562045 | MS.gene055407:intron | 45.0% | |
| TTGGAGGACAGTAGTACTAG+TGG | + | chr8.1:86558966-86558985 | None:intergenic | 45.0% | |
| TTGGTCCCCTTCTCTTTGAA+TGG | + | chr8.1:86559490-86559509 | None:intergenic | 45.0% | |
| TTTGGTTGTGAGTTGCATGC+AGG | - | chr8.1:86558227-86558246 | MS.gene055407:intron | 45.0% | |
| ! | ACATTTCCATAGGTTGGAGG+TGG | + | chr8.1:86557663-86557682 | None:intergenic | 45.0% |
| ! | CATGTCTTGTTCTTGGTCCT+TGG | + | chr8.1:86558778-86558797 | None:intergenic | 45.0% |
| ! | GAGCCTCAGCATTTTTACCT+TGG | + | chr8.1:86562062-86562081 | None:intergenic | 45.0% |
| ! | GTGACCACATGTCTTGTTCT+TGG | + | chr8.1:86558785-86558804 | None:intergenic | 45.0% |
| !! | ACAGGGCCGTTCTAAGAATT+CGG | + | chr8.1:86559242-86559261 | None:intergenic | 45.0% |
| !! | CAATTTGGTTGATGGAGGTG+TGG | - | chr8.1:86560572-86560591 | MS.gene055407:intron | 45.0% |
| !! | GTTCTAAGAATTCGGAGGCT+CGG | + | chr8.1:86559234-86559253 | None:intergenic | 45.0% |
| !! | TGAGCCACTAGTTGATTTGC+AGG | - | chr8.1:86559530-86559549 | MS.gene055407:CDS | 45.0% |
| !!! | CTCTTGCTTTTGGTGTTAGG+TGG | - | chr8.1:86559056-86559075 | MS.gene055407:intron | 45.0% |
| !!! | CTTGCTTTTGGTGTTAGGTG+GGG | - | chr8.1:86559058-86559077 | MS.gene055407:intron | 45.0% |
| !!! | GTCCTCTTGCTTTTGGTGTT+AGG | - | chr8.1:86559053-86559072 | MS.gene055407:intron | 45.0% |
| !! | TTATAAATATTTCATTAAAT+CGG | - | chr8.1:86561378-86561397 | MS.gene055407:CDS | 5.0% |
| !!! | AAATAAAATTTTTTTTTTTG+AGG | + | chr8.1:86557820-86557839 | None:intergenic | 5.0% |
| !!! | AATAAAATTTTTTTTTTTGA+GGG | + | chr8.1:86557819-86557838 | None:intergenic | 5.0% |
| !!! | ATTATATATATTTTTTTTGA+AGG | + | chr8.1:86558511-86558530 | None:intergenic | 5.0% |
| AGAGGACGAGTAGGGTCATT+TGG | + | chr8.1:86558348-86558367 | None:intergenic | 50.0% | |
| AGGTGTGGCTGCATGTAATC+CGG | - | chr8.1:86560587-86560606 | MS.gene055407:intron | 50.0% | |
| CCACTTGGAAAAGGCTCTTC+AGG | - | chr8.1:86557746-86557765 | MS.gene055407:CDS | 50.0% | |
| GAGGACGAGTAGGGTCATTT+GGG | + | chr8.1:86558347-86558366 | None:intergenic | 50.0% | |
| GCAAACAGCTCAACAGAGCT+GGG | - | chr8.1:86558903-86558922 | MS.gene055407:intron | 50.0% | |
| GGATCCATCCATGGATTCCA+TGG | - | chr8.1:86561924-86561943 | MS.gene055407:intron | 50.0% | |
| GGTGGGGTTCCTCATGTATA+CGG | - | chr8.1:86559074-86559093 | MS.gene055407:intron | 50.0% | |
| TACCCGGGTCCAAAGTATGA+CGG | - | chr8.1:86560211-86560230 | MS.gene055407:intron | 50.0% | |
| TACCTTGCCAAAGTCTTCCC+AGG | - | chr8.1:86561307-86561326 | MS.gene055407:intron | 50.0% | |
| TGCAAACAGCTCAACAGAGC+TGG | - | chr8.1:86558902-86558921 | MS.gene055407:intron | 50.0% | |
| TGGTTGGGATGCTACATACC+CGG | - | chr8.1:86560195-86560214 | MS.gene055407:intron | 50.0% | |
| TGTCTGAAGATTGGAGGCCT+GGG | + | chr8.1:86561327-86561346 | None:intergenic | 50.0% | |
| TTGCCGTCATACTTTGGACC+CGG | + | chr8.1:86560217-86560236 | None:intergenic | 50.0% | |
| TTGTCTGAAGATTGGAGGCC+TGG | + | chr8.1:86561328-86561347 | None:intergenic | 50.0% | |
| ! | AGTGACCGGAGGGTGTATAT+TGG | + | chr8.1:86559558-86559577 | None:intergenic | 50.0% |
| ! | CCTGAAGAGCCTTTTCCAAG+TGG | + | chr8.1:86557749-86557768 | None:intergenic | 50.0% |
| ! | GCAGCATTTTGGGCAACATC+TGG | - | chr8.1:86561235-86561254 | MS.gene055407:intron | 50.0% |
| !! | GCAACATCTGGTCTTGCAAC+TGG | - | chr8.1:86561247-86561266 | MS.gene055407:intron | 50.0% |
| AGAATTCGGAGGCTCGGCTT+TGG | + | chr8.1:86559228-86559247 | None:intergenic | 55.0% | |
| CGAGTAGGGTCATTTGGGTG+AGG | + | chr8.1:86558342-86558361 | None:intergenic | 55.0% | |
| GAATTCGGAGGCTCGGCTTT+GGG | + | chr8.1:86559227-86559246 | None:intergenic | 55.0% | |
| GAGCTACCACCTCCAACCTA+TGG | - | chr8.1:86557654-86557673 | MS.gene055407:CDS | 55.0% | |
| GGTTGGGATGCTACATACCC+GGG | - | chr8.1:86560196-86560215 | MS.gene055407:intron | 55.0% | |
| GTTGAGCTGTTTGCACCCCA+GGG | + | chr8.1:86558897-86558916 | None:intergenic | 55.0% | |
| TGCCGTCATACTTTGGACCC+GGG | + | chr8.1:86560216-86560235 | None:intergenic | 55.0% | |
| TGTTGAGCTGTTTGCACCCC+AGG | + | chr8.1:86558898-86558917 | None:intergenic | 55.0% | |
| TTGGAGGCCTGGGAAGACTT+TGG | + | chr8.1:86561317-86561336 | None:intergenic | 55.0% | |
| ! | ATAGCTGGGACTAGCACTGG+AGG | - | chr8.1:86558291-86558310 | MS.gene055407:intron | 55.0% |
| ! | GTGATAGCTGGGACTAGCAC+TGG | - | chr8.1:86558288-86558307 | MS.gene055407:intron | 55.0% |
| !! | ATGGGATTAGTGACGGGCCA+TGG | + | chr8.1:86559785-86559804 | None:intergenic | 55.0% |
| !! | GGGCCGTTCTAAGAATTCGG+AGG | + | chr8.1:86559239-86559258 | None:intergenic | 55.0% |
| !! | TGGGATTAGTGACGGGCCAT+GGG | + | chr8.1:86559784-86559803 | None:intergenic | 55.0% |
| GGCCTGGGAAGACTTTGGCA+AGG | + | chr8.1:86561312-86561331 | None:intergenic | 60.0% | |
| TATAATCCAGGCCCGGCCCT+GGG | - | chr8.1:86558878-86558897 | MS.gene055407:intron | 60.0% | |
| TTATAATCCAGGCCCGGCCC+TGG | - | chr8.1:86558877-86558896 | MS.gene055407:intron | 60.0% | |
| TTGAGGTCCATGACTGGGGG+AGG | + | chr8.1:86558929-86558948 | None:intergenic | 60.0% | |
| AGCTGTTTGCACCCCAGGGC+CGG | + | chr8.1:86558893-86558912 | None:intergenic | 65.0% | |
| ATAATCCAGGCCCGGCCCTG+GGG | - | chr8.1:86558879-86558898 | MS.gene055407:intron | 65.0% | |
| AGCTGGGCCTCCCCCAGTCA+TGG | - | chr8.1:86558919-86558938 | MS.gene055407:intron | 70.0% | |
| GCTGTTTGCACCCCAGGGCC+GGG | + | chr8.1:86558892-86558911 | None:intergenic | 70.0% | |
| ! | TTGCACCCCAGGGCCGGGCC+TGG | + | chr8.1:86558887-86558906 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 86557588 | 86562206 | 86557588 | ID=MS.gene055407 |
| chr8.1 | mRNA | 86557588 | 86562206 | 86557588 | ID=MS.gene055407.t1;Parent=MS.gene055407 |
| chr8.1 | exon | 86562027 | 86562206 | 86562027 | ID=MS.gene055407.t1.exon1;Parent=MS.gene055407.t1 |
| chr8.1 | CDS | 86562027 | 86562206 | 86562027 | ID=cds.MS.gene055407.t1;Parent=MS.gene055407.t1 |
| chr8.1 | exon | 86561361 | 86561545 | 86561361 | ID=MS.gene055407.t1.exon2;Parent=MS.gene055407.t1 |
| chr8.1 | CDS | 86561361 | 86561545 | 86561361 | ID=cds.MS.gene055407.t1;Parent=MS.gene055407.t1 |
| chr8.1 | exon | 86559434 | 86559599 | 86559434 | ID=MS.gene055407.t1.exon3;Parent=MS.gene055407.t1 |
| chr8.1 | CDS | 86559434 | 86559599 | 86559434 | ID=cds.MS.gene055407.t1;Parent=MS.gene055407.t1 |
| chr8.1 | exon | 86559186 | 86559332 | 86559186 | ID=MS.gene055407.t1.exon4;Parent=MS.gene055407.t1 |
| chr8.1 | CDS | 86559186 | 86559332 | 86559186 | ID=cds.MS.gene055407.t1;Parent=MS.gene055407.t1 |
| chr8.1 | exon | 86558431 | 86558688 | 86558431 | ID=MS.gene055407.t1.exon5;Parent=MS.gene055407.t1 |
| chr8.1 | CDS | 86558431 | 86558688 | 86558431 | ID=cds.MS.gene055407.t1;Parent=MS.gene055407.t1 |
| chr8.1 | exon | 86557588 | 86557881 | 86557588 | ID=MS.gene055407.t1.exon6;Parent=MS.gene055407.t1 |
| chr8.1 | CDS | 86557588 | 86557881 | 86557588 | ID=cds.MS.gene055407.t1;Parent=MS.gene055407.t1 |
| Gene Sequence |
| Protein sequence |
