AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055498

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055498.t1 MTR_3g099190 97.227 649 18 0 2 650 3 651 0.0 1299
MS.gene055498.t1 MTR_2g013120 78.858 648 129 3 4 650 15 655 0.0 1066
MS.gene055498.t1 MTR_2g027220 83.387 626 85 5 7 628 3 613 0.0 1061
MS.gene055498.t1 MTR_6g004200 25.561 579 364 20 79 621 6 553 2.10e-35 141
MS.gene055498.t1 MTR_7g069540 24.552 558 364 20 34 569 11 533 2.28e-20 95.9
MS.gene055498.t1 MTR_5g046610 23.364 535 361 17 58 569 27 535 6.88e-20 94.4
MS.gene055498.t1 MTR_4g017200 23.377 539 364 17 54 569 23 535 9.27e-20 94.0
MS.gene055498.t1 MTR_2g009330 22.046 567 368 19 91 625 64 588 1.46e-17 87.0
MS.gene055498.t1 MTR_2g027200 53.226 62 10 1 550 611 1 43 4.17e-16 73.2
MS.gene055498.t1 MTR_2g015560 22.610 544 353 17 54 567 3 508 7.01e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055498.t1 AT3G48560 83.276 586 98 0 65 650 85 670 0.0 1036
MS.gene055498.t1 AT5G17380 27.931 580 358 17 73 621 7 557 3.21e-47 176
MS.gene055498.t1 AT5G01330 24.760 521 322 18 83 569 36 520 5.68e-23 103
MS.gene055498.t1 AT5G01320 23.623 563 361 17 42 569 3 531 6.93e-23 103
MS.gene055498.t1 AT4G33070 23.552 518 332 15 83 569 51 535 1.63e-20 96.3
MS.gene055498.t1 AT5G54960 23.506 502 348 15 83 567 51 533 1.27e-17 87.4

Find 199 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTTGGTGCTATGGGTTT+TGG 0.185895 3.2:+82544976 MS.gene055498:CDS
AGTGATCTGTTGCTTGCTTT+TGG 0.224503 3.2:+82544541 MS.gene055498:CDS
TAAATACCCGGTTAGCTTAA+TGG 0.255425 3.2:-82544260 None:intergenic
GAGAATGTTACGGATGGTTT+TGG 0.263072 3.2:-82543849 None:intergenic
GGTGGAAGGTGGTGCGGTGG+AGG 0.278151 3.2:-82543666 None:intergenic
TTCGCCTCAGTATGCTATTC+AGG 0.285179 3.2:+82544837 MS.gene055498:CDS
ATAGATTCTACAAGGCAAAT+AGG 0.295018 3.2:+82545178 MS.gene055498:CDS
GTGAGTGTGGTGGTGCGTTT+AGG 0.296862 3.2:-82543569 None:intergenic
AGGTTTGATGATAGAGTTAC+TGG 0.302099 3.2:+82544568 MS.gene055498:CDS
TTTGGATTACCTGCTGCTAT+TGG 0.306470 3.2:+82544994 MS.gene055498:CDS
TTATCTTGGTGACCCTTCTA+AGG 0.316866 3.2:+82545209 MS.gene055498:CDS
TCAGCAAATCCAAGCATGTT+AGG 0.319955 3.2:-82545246 None:intergenic
GGAAGGTCTTAATAGAGTTT+TGG 0.325965 3.2:+82544708 MS.gene055498:CDS
GGCGTTTGTATCGCCACTTC+TGG 0.330304 3.2:+82543935 MS.gene055498:CDS
GAGTTGTTGTTGAACATCTT+TGG 0.336827 3.2:-82544215 None:intergenic
GGTAACGCCTTCGCGTTCTA+AGG 0.337243 3.2:-82543768 None:intergenic
AAAATCTCATCCTCCTTAGA+AGG 0.349687 3.2:-82545222 None:intergenic
TCCTGTTGCTAGTACTTTGA+TGG 0.351983 3.2:+82544429 MS.gene055498:CDS
GCTCGCTCATCCGGTCTTCC+CGG 0.355441 3.2:+82543914 MS.gene055498:CDS
TTCTGGTGGACTTGGTGCTA+TGG 0.360161 3.2:+82544969 MS.gene055498:CDS
AAATACCCGGTTAGCTTAAT+GGG 0.368189 3.2:-82544259 None:intergenic
GATATTGATTCAGCTGAGAT+TGG 0.373548 3.2:+82544634 MS.gene055498:CDS
ATCCTTGAATGAACCATTGC+TGG 0.373588 3.2:-82545406 None:intergenic
GTCCCTCTCATCGCTATTAC+CGG 0.374961 3.2:+82544010 MS.gene055498:CDS
GCTAGTACTTTGATGGGATT+AGG 0.375995 3.2:+82544436 MS.gene055498:CDS
GTTGTTGAATAATCAACATC+TGG 0.376276 3.2:+82545134 MS.gene055498:CDS
GGATTAGGTTGTTACCCTAT+TGG 0.378851 3.2:+82544451 MS.gene055498:CDS
GGTGGTGGAAGGTGGTGCGG+TGG 0.379417 3.2:-82543669 None:intergenic
TGCGCCTCACTAGGAATCTT+AGG 0.383660 3.2:-82544292 None:intergenic
ATCTCCATGGAAGCGCCGCC+AGG 0.383879 3.2:-82543806 None:intergenic
AACTTCGGGCCGCCCCGGCC+CGG 0.389700 3.2:+82544177 MS.gene055498:CDS
AACCGGTTTGTGGAGTTAAC+TGG 0.389714 3.2:+82544403 MS.gene055498:CDS
CGGCCTCGCAGACGCTTTGA+TGG 0.390497 3.2:+82543982 MS.gene055498:CDS
AGAGAATGTTCACCTCCAAT+AGG 0.394457 3.2:-82544466 None:intergenic
TGGTTAACTTCTGGTGGACT+TGG 0.398980 3.2:+82544961 MS.gene055498:CDS
AGTTGTTGTTGAACATCTTT+GGG 0.400294 3.2:-82544214 None:intergenic
TCCGAGCCCATTAAGCTAAC+CGG 0.409009 3.2:+82544253 MS.gene055498:CDS
GAACATTCTCTTTCAATGTT+GGG 0.410408 3.2:+82544478 MS.gene055498:CDS
CTCGTCGTCGGTGGTGGTGG+TGG 0.414914 3.2:-82543684 None:intergenic
TGAGTGTGGTGGTGCGTTTA+GGG 0.415471 3.2:-82543568 None:intergenic
AACAACTCGCTGTTCCGAAT+TGG 0.416644 3.2:+82544230 MS.gene055498:CDS
GTGGAAGGTGGTGCGGTGGA+GGG 0.417842 3.2:-82543665 None:intergenic
GATGTTGATTATTCAACAAC+AGG 0.420055 3.2:-82545131 None:intergenic
GAACCATTGCTGGGAATCAT+TGG 0.422917 3.2:-82545396 None:intergenic
TAGATTCTACAAGGCAAATA+GGG 0.425555 3.2:+82545179 MS.gene055498:CDS
TTTGGAGAGTAAAGGAATCA+AGG 0.425848 3.2:+82544726 MS.gene055498:CDS
CTTGCAACTTCGGGCCGCCC+CGG 0.427247 3.2:+82544172 MS.gene055498:CDS
TGGCTCGTCGTCGGTGGTGG+TGG 0.430411 3.2:-82543687 None:intergenic
GGTGGTGCGTTTAGGGAAAG+TGG 0.430981 3.2:-82543561 None:intergenic
TGAACATTCTCTTTCAATGT+TGG 0.431403 3.2:+82544477 MS.gene055498:CDS
ACATCAATGAGAACCGGGCC+GGG 0.431424 3.2:-82544190 None:intergenic
GAAGGCTACGCTCGCTCATC+CGG 0.435119 3.2:+82543905 MS.gene055498:CDS
AGCTAACCGGGTATTTATCC+AGG 0.435277 3.2:+82544266 MS.gene055498:CDS
CCTAGGCAGTGGTTAACTTC+TGG 0.436210 3.2:+82544952 MS.gene055498:CDS
GGTGGTGGTGGAAGGTGGTG+CGG 0.436889 3.2:-82543672 None:intergenic
CATTCTCCGGGGAACTTGAC+CGG 0.442229 3.2:-82544029 None:intergenic
TTGATGTTGAAGATATTCCT+AGG 0.443087 3.2:+82544128 MS.gene055498:CDS
AATAGGGCTCATACTTATCT+TGG 0.443101 3.2:+82545195 MS.gene055498:CDS
GACTCCACCTTGTTCGTGAC+GGG 0.443115 3.2:-82543873 None:intergenic
ATATCAACGACTATTGCATC+AGG 0.443402 3.2:-82545033 None:intergenic
TTCAACAACAGGATCTTAAC+CGG 0.445446 3.2:-82545120 None:intergenic
ATCGGTTCCGATCATTCTCC+GGG 0.445677 3.2:-82544041 None:intergenic
TCGTCGGTGGTGGTGGTGGA+AGG 0.447050 3.2:-82543680 None:intergenic
TGGTGCGGTGGAGGGTTTGA+GGG 0.447339 3.2:-82543657 None:intergenic
TAGTGAGGCGCAGTTAGAAC+AGG 0.448177 3.2:+82544303 MS.gene055498:CDS
ATCTGGGTATGGTTGTTCAA+TGG 0.448201 3.2:+82545151 MS.gene055498:CDS
TTGGGTACATCAATGAGAAC+CGG 0.448716 3.2:-82544196 None:intergenic
TCTGGTGGACTTGGTGCTAT+GGG 0.449060 3.2:+82544970 MS.gene055498:CDS
CATCGGTTCCGATCATTCTC+CGG 0.449609 3.2:-82544042 None:intergenic
GTGGTGCGGTGGAGGGTTTG+AGG 0.449683 3.2:-82543658 None:intergenic
CCCATCAAAGTACTAGCAAC+AGG 0.449704 3.2:-82544430 None:intergenic
CCCGGTTAGCTTAATGGGCT+CGG 0.459364 3.2:-82544254 None:intergenic
TCTGGGTATGGTTGTTCAAT+GGG 0.460755 3.2:+82545152 MS.gene055498:CDS
GCTGACTAAGTTGGTGGCAC+CGG 0.460794 3.2:-82543960 None:intergenic
CAATAGTCGTTGATATTGAC+GGG 0.462837 3.2:+82545040 MS.gene055498:CDS
CTTTCAATGTTGGGTATGCA+TGG 0.465046 3.2:+82544487 MS.gene055498:CDS
TGAGGAATTGAACCGGTTTG+TGG 0.466094 3.2:+82544393 MS.gene055498:CDS
CCTGTTGCTAGTACTTTGAT+GGG 0.469144 3.2:+82544430 MS.gene055498:CDS
GTGGTGCGTTTAGGGAAAGT+GGG 0.473107 3.2:-82543560 None:intergenic
GAGAATGTTCACCTCCAATA+GGG 0.474646 3.2:-82544465 None:intergenic
CAGAAAATGTTGGACACTCC+TGG 0.475840 3.2:+82545327 MS.gene055498:CDS
CTTGGATTTGCTGATGCTTG+CGG 0.477480 3.2:+82545255 MS.gene055498:CDS
CAGAAGTTGAAATTTCCTCT+TGG 0.480563 3.2:+82544790 MS.gene055498:CDS
CCACCACCAACATATAAAAC+AGG 0.484903 3.2:-82544355 None:intergenic
TCCTCCACCCAACCCCGAAA+AGG 0.485931 3.2:+82543725 MS.gene055498:CDS
ATATTGATTCAGCTGAGATT+GGG 0.489098 3.2:+82544635 MS.gene055498:CDS
TTGTTGAGAATGGGAGAGAG+AGG 0.489147 3.2:-82543596 None:intergenic
TTACCCTGGCGGCGCTTCCA+TGG 0.491095 3.2:+82543802 MS.gene055498:CDS
TCCCAGCAATGGTTCATTCA+AGG 0.491125 3.2:+82545404 MS.gene055498:CDS
TACATCAATGAGAACCGGGC+CGG 0.491527 3.2:-82544191 None:intergenic
TATAATGAACGTTCAAGAGT+TGG 0.491642 3.2:+82545074 MS.gene055498:CDS
TGTATCGCCACTTCTGGTCC+CGG 0.495694 3.2:+82543941 MS.gene055498:CDS
CGGTGTTTCTTGAAAAGCAT+CGG 0.498339 3.2:-82544059 None:intergenic
CAGCAAATCCAAGCATGTTA+GGG 0.498452 3.2:-82545245 None:intergenic
CAAGTTCCCCGGAGAATGAT+CGG 0.499099 3.2:+82544034 MS.gene055498:CDS
GTGCGAATAGAAAGGAGATC+TGG 0.502437 3.2:-82543537 None:intergenic
TTGGAGAGTAAAGGAATCAA+GGG 0.505762 3.2:+82544727 MS.gene055498:CDS
ACAATAACATCAAGAAGATA+AGG 0.511351 3.2:-82545351 None:intergenic
AGATCTGGAAGGAGTAGTAG+TGG 0.512532 3.2:-82543522 None:intergenic
TTTACAAGTATAAGAGACCT+AGG 0.514340 3.2:+82544935 MS.gene055498:CDS
GGTGATGCTATTGTTAGTAC+TGG 0.514392 3.2:+82544880 MS.gene055498:CDS
TCGGTGGTGGTGGTGGAAGG+TGG 0.514483 3.2:-82543677 None:intergenic
CATCAATGAGAACCGGGCCG+GGG 0.517234 3.2:-82544189 None:intergenic
CACCAGTTAACTCCACAAAC+CGG 0.519366 3.2:-82544405 None:intergenic
TATAAGAGTAGAGAATCTTC+CGG 0.519396 3.2:+82545101 MS.gene055498:CDS
GATATGAAGGTGGCGTTGGA+AGG 0.519636 3.2:+82544691 MS.gene055498:CDS
CTATTACCGGTCAAGTTCCC+CGG 0.520429 3.2:+82544023 MS.gene055498:CDS
GATACAAACGCCGGGAAGAC+CGG 0.522460 3.2:-82543924 None:intergenic
ACAGCAGCACCAATAGCAGC+AGG 0.523328 3.2:-82545003 None:intergenic
GCAATAGTCGTTGATATTGA+CGG 0.523932 3.2:+82545039 MS.gene055498:CDS
ACTAGGAATCTTAGGTAACC+TGG 0.525532 3.2:-82544284 None:intergenic
GGATGAGCGAGCGTAGCCTT+CGG 0.525610 3.2:-82543903 None:intergenic
AGAAGCCATTCAGAAAATGT+TGG 0.526335 3.2:+82545317 MS.gene055498:CDS
TGTTCTAACTGCGCCTCACT+AGG 0.528037 3.2:-82544301 None:intergenic
CTGACTAAGTTGGTGGCACC+GGG 0.530079 3.2:-82543959 None:intergenic
GGTGGCACCGGGACCAGAAG+TGG 0.531046 3.2:-82543948 None:intergenic
TCACTGAGGGTGATGGAAGA+AGG 0.531460 3.2:+82545433 MS.gene055498:CDS
GAATGGCTCGTCGTCGGTGG+TGG 0.531865 3.2:-82543690 None:intergenic
ATTCTAGTGAGGAATTGAAC+CGG 0.535594 3.2:+82544386 MS.gene055498:CDS
AAAGCTTCTTTGACAACCCT+AGG 0.536257 3.2:-82544145 None:intergenic
TTAGGTTGTTACCCTATTGG+AGG 0.536424 3.2:+82544454 MS.gene055498:CDS
CTTCTTGGTCACACGAGCAG+CGG 0.539848 3.2:-82545283 None:intergenic
TGCGAGGCCGCTGACTAAGT+TGG 0.540117 3.2:-82543969 None:intergenic
TGCGGATATGAAGGTGGCGT+TGG 0.543600 3.2:+82544687 MS.gene055498:CDS
GGTGGAGTCTTCGCCGCCGA+AGG 0.545206 3.2:+82543887 MS.gene055498:CDS
CGGGGCGGCCCGAAGTTGCA+AGG 0.550870 3.2:-82544171 None:intergenic
TGATGTTGAAGATATTCCTA+GGG 0.552117 3.2:+82544129 MS.gene055498:CDS
TGTTGAGAATGGGAGAGAGA+GGG 0.553154 3.2:-82543595 None:intergenic
GTCGATTTGTGCGGATATGA+AGG 0.553853 3.2:+82544678 MS.gene055498:CDS
TGGAACGGGTGAGAGCTTGG+TGG 0.554430 3.2:-82543829 None:intergenic
GAGGAGAAACGAGAGATGAA+TGG 0.554571 3.2:-82543707 None:intergenic
ACCAACGTCTTCGCTTACCC+TGG 0.560240 3.2:+82543788 MS.gene055498:CDS
AGTAGTAGTGGTGGCTGCCA+TGG 0.560243 3.2:-82543510 None:intergenic
TTCTTGGTCACACGAGCAGC+GGG 0.560773 3.2:-82545282 None:intergenic
CAATGAGAACCGGGCCGGGG+CGG 0.561210 3.2:-82544186 None:intergenic
TTAATGGGCTCGGACCAATT+CGG 0.564583 3.2:-82544244 None:intergenic
GAGAGCTTGGTGGATCTCCA+TGG 0.565285 3.2:-82543819 None:intergenic
GATCTCGTTACTTCAACTAT+CGG 0.566066 3.2:-82544079 None:intergenic
GAGGCCGCTGACTAAGTTGG+TGG 0.569458 3.2:-82543966 None:intergenic
AGAGAGAGGGAATGTGAGTG+TGG 0.569950 3.2:-82543582 None:intergenic
AAAGTGGGGTGCGAATAGAA+AGG 0.570405 3.2:-82543545 None:intergenic
CCGAGCCCATTAAGCTAACC+GGG 0.571969 3.2:+82544254 MS.gene055498:CDS
GTCGTTGATATTGACGGGGA+TGG 0.574168 3.2:+82545045 MS.gene055498:CDS
TTGTTGAATAATCAACATCT+GGG 0.577937 3.2:+82545135 MS.gene055498:CDS
AGACTCCACCTTGTTCGTGA+CGG 0.580662 3.2:-82543874 None:intergenic
GAATAATCAACATCTGGGTA+TGG 0.582765 3.2:+82545140 MS.gene055498:CDS
GCTATTGTTAGTACTGGTGT+TGG 0.584499 3.2:+82544886 MS.gene055498:CDS
TTCAAGGATGTGATCACTGA+GGG 0.586917 3.2:+82545420 MS.gene055498:CDS
CGCTGCTCGTGTGACCAAGA+AGG 0.589712 3.2:+82545284 MS.gene055498:CDS
TCTCCATGGAAGCGCCGCCA+GGG 0.592923 3.2:-82543805 None:intergenic
AGGCAGTGGTTAACTTCTGG+TGG 0.593875 3.2:+82544955 MS.gene055498:CDS
AGAGATGAATGGCTCGTCGT+CGG 0.597419 3.2:-82543696 None:intergenic
GATGAATGGCTCGTCGTCGG+TGG 0.598166 3.2:-82543693 None:intergenic
TTGCCAATGATTCCCAGCAA+TGG 0.598579 3.2:+82545393 MS.gene055498:CDS
TCTTGGTGACCCTTCTAAGG+AGG 0.602410 3.2:+82545212 MS.gene055498:CDS
CCAGAAGTTAACCACTGCCT+AGG 0.604243 3.2:-82544952 None:intergenic
GATTCCGACACGAGAGTGAG+TGG 0.607991 3.2:-82543627 None:intergenic
AGTATAAGAGACCTAGGCAG+TGG 0.611210 3.2:+82544941 MS.gene055498:CDS
AAAACCACTCACTCTCGTGT+CGG 0.612194 3.2:+82543623 MS.gene055498:CDS
TCAAATGTCTTAAAACCAAG+AGG 0.614018 3.2:-82544805 None:intergenic
AAATCTCATCCTCCTTAGAA+GGG 0.616731 3.2:-82545221 None:intergenic
TCCTTGAATGAACCATTGCT+GGG 0.619533 3.2:-82545405 None:intergenic
TGGTTGTTTGAATTCTAGTG+AGG 0.619960 3.2:+82544375 MS.gene055498:CDS
TGAGCGAGCGTAGCCTTCGG+CGG 0.621739 3.2:-82543900 None:intergenic
GGCAATACATGCTCTTGATG+AGG 0.622360 3.2:-82545375 None:intergenic
TAAGGCTTCAACGAGAATGT+CGG 0.623788 3.2:-82543750 None:intergenic
CTCCACCTTGTTCGTGACGG+GGG 0.626976 3.2:-82543871 None:intergenic
TGGAGAGTAAAGGAATCAAG+GGG 0.627686 3.2:+82544728 MS.gene055498:CDS
TGGGTACATCAATGAGAACC+GGG 0.630749 3.2:-82544195 None:intergenic
TCCACATGTGTCGATTTGTG+CGG 0.632739 3.2:+82544669 MS.gene055498:CDS
ACTCCACCTTGTTCGTGACG+GGG 0.634468 3.2:-82543872 None:intergenic
GACCGGTAATAGCGATGAGA+GGG 0.634896 3.2:-82544012 None:intergenic
ATGGGAGGATAGATTCTACA+AGG 0.638443 3.2:+82545170 MS.gene055498:CDS
GTTACCTAAGATTCCTAGTG+AGG 0.640530 3.2:+82544288 MS.gene055498:CDS
GAGAGGGAATGTGAGTGTGG+TGG 0.641228 3.2:-82543579 None:intergenic
GAAGTGGCGATACAAACGCC+GGG 0.644811 3.2:-82543932 None:intergenic
GGTGCCACCAACTTAGTCAG+CGG 0.645852 3.2:+82543962 MS.gene055498:CDS
GATGTGATCACTGAGGGTGA+TGG 0.648791 3.2:+82545426 MS.gene055498:CDS
AGGTAACCTGGATAAATACC+CGG 0.649250 3.2:-82544272 None:intergenic
GGGTATGGTTGTTCAATGGG+AGG 0.651476 3.2:+82545155 MS.gene055498:CDS
TGACCGGTAATAGCGATGAG+AGG 0.651599 3.2:-82544013 None:intergenic
ACATCAAGAAGATAAGGACC+AGG 0.655550 3.2:-82545345 None:intergenic
TCCGCACAAATCGACACATG+TGG 0.659601 3.2:-82544670 None:intergenic
GTTGAAGCCTTAGAACGCGA+AGG 0.665145 3.2:+82543761 MS.gene055498:CDS
AACGTCTTCGCTTACCCTGG+CGG 0.670998 3.2:+82543791 MS.gene055498:CDS
TCTGGAAGGAGTAGTAGTGG+TGG 0.671721 3.2:-82543519 None:intergenic
TATCAACGACTATTGCATCA+GGG 0.673446 3.2:-82545032 None:intergenic
GAATAGAAAGGAGATCTGGA+AGG 0.682671 3.2:-82543533 None:intergenic
TATCCATCAAAGCGTCTGCG+AGG 0.682987 3.2:-82543985 None:intergenic
GTGCTTGATGAATTGACGAA+TGG 0.687054 3.2:+82544859 MS.gene055498:CDS
TGGTGCGTTTAGGGAAAGTG+GGG 0.694082 3.2:-82543559 None:intergenic
AGAAGTGGCGATACAAACGC+CGG 0.706676 3.2:-82543933 None:intergenic
AGCACCTGAATAGCATACTG+AGG 0.708235 3.2:-82544841 None:intergenic
GATTTGTGCGGATATGAAGG+TGG 0.709634 3.2:+82544681 MS.gene055498:CDS
GTGTTGGACAGCATCAAATG+TGG 0.727126 3.2:+82544902 MS.gene055498:CDS
GCCAGGGTAAGCGAAGACGT+TGG 0.733609 3.2:-82543789 None:intergenic
ATTCAAGGATGTGATCACTG+AGG 0.744694 3.2:+82545419 MS.gene055498:CDS
AATAGTCGTTGATATTGACG+GGG 0.747018 3.2:+82545041 MS.gene055498:CDS
TCGGTTCCGATCATTCTCCG+GGG 0.760009 3.2:-82544040 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAACCTGTTTTATATGT+TGG + chr3.2:82544349-82544368 MS.gene055498:CDS 20.0%
! ACAATAACATCAAGAAGATA+AGG - chr3.2:82545354-82545373 None:intergenic 25.0%
! TTGTTGAATAATCAACATCT+GGG + chr3.2:82545135-82545154 MS.gene055498:CDS 25.0%
ATAGATTCTACAAGGCAAAT+AGG + chr3.2:82545178-82545197 MS.gene055498:CDS 30.0%
GAACATTCTCTTTCAATGTT+GGG + chr3.2:82544478-82544497 MS.gene055498:CDS 30.0%
GTTGTTGAATAATCAACATC+TGG + chr3.2:82545134-82545153 MS.gene055498:CDS 30.0%
TAGATTCTACAAGGCAAATA+GGG + chr3.2:82545179-82545198 MS.gene055498:CDS 30.0%
TATAAGAGTAGAGAATCTTC+CGG + chr3.2:82545101-82545120 MS.gene055498:CDS 30.0%
TATAATGAACGTTCAAGAGT+TGG + chr3.2:82545074-82545093 MS.gene055498:CDS 30.0%
TCAAATGTCTTAAAACCAAG+AGG - chr3.2:82544808-82544827 None:intergenic 30.0%
TGAACATTCTCTTTCAATGT+TGG + chr3.2:82544477-82544496 MS.gene055498:CDS 30.0%
TGATGTTGAAGATATTCCTA+GGG + chr3.2:82544129-82544148 MS.gene055498:CDS 30.0%
TTGATGTTGAAGATATTCCT+AGG + chr3.2:82544128-82544147 MS.gene055498:CDS 30.0%
TTTACAAGTATAAGAGACCT+AGG + chr3.2:82544935-82544954 MS.gene055498:CDS 30.0%
! AAACCTGTTTTATATGTTGG+TGG + chr3.2:82544352-82544371 MS.gene055498:CDS 30.0%
! AGTTGTTGTTGAACATCTTT+GGG - chr3.2:82544217-82544236 None:intergenic 30.0%
! GATGTTGATTATTCAACAAC+AGG - chr3.2:82545134-82545153 None:intergenic 30.0%
!! ATATTGATTCAGCTGAGATT+GGG + chr3.2:82544635-82544654 MS.gene055498:CDS 30.0%
!!! AATAGAGTTTTGGAGAGTAA+AGG + chr3.2:82544718-82544737 MS.gene055498:CDS 30.0%
!!! GTTTTTGGTTTGTTGAGAAT+GGG - chr3.2:82543608-82543627 None:intergenic 30.0%
!!! TCTTGGTTTTAAGACATTTG+AGG + chr3.2:82544807-82544826 MS.gene055498:CDS 30.0%
AAAATCTCATCCTCCTTAGA+AGG - chr3.2:82545225-82545244 None:intergenic 35.0%
AAATCTCATCCTCCTTAGAA+GGG - chr3.2:82545224-82545243 None:intergenic 35.0%
AATAGGGCTCATACTTATCT+TGG + chr3.2:82545195-82545214 MS.gene055498:CDS 35.0%
AATAGTCGTTGATATTGACG+GGG + chr3.2:82545041-82545060 MS.gene055498:CDS 35.0%
AGAAGCCATTCAGAAAATGT+TGG + chr3.2:82545317-82545336 MS.gene055498:CDS 35.0%
ATATCAACGACTATTGCATC+AGG - chr3.2:82545036-82545055 None:intergenic 35.0%
ATTCTAGTGAGGAATTGAAC+CGG + chr3.2:82544386-82544405 MS.gene055498:CDS 35.0%
CAATAGTCGTTGATATTGAC+GGG + chr3.2:82545040-82545059 MS.gene055498:CDS 35.0%
CAGAAGTTGAAATTTCCTCT+TGG + chr3.2:82544790-82544809 MS.gene055498:CDS 35.0%
GAATAATCAACATCTGGGTA+TGG + chr3.2:82545140-82545159 MS.gene055498:CDS 35.0%
GATCTCGTTACTTCAACTAT+CGG - chr3.2:82544082-82544101 None:intergenic 35.0%
GCAATAGTCGTTGATATTGA+CGG + chr3.2:82545039-82545058 MS.gene055498:CDS 35.0%
TATCAACGACTATTGCATCA+GGG - chr3.2:82545035-82545054 None:intergenic 35.0%
TGGTTGTTTGAATTCTAGTG+AGG + chr3.2:82544375-82544394 MS.gene055498:CDS 35.0%
TTCAACAACAGGATCTTAAC+CGG - chr3.2:82545123-82545142 None:intergenic 35.0%
TTGGAGAGTAAAGGAATCAA+GGG + chr3.2:82544727-82544746 MS.gene055498:CDS 35.0%
TTTGGAGAGTAAAGGAATCA+AGG + chr3.2:82544726-82544745 MS.gene055498:CDS 35.0%
! AGGTTTGATGATAGAGTTAC+TGG + chr3.2:82544568-82544587 MS.gene055498:CDS 35.0%
! AGTGTCCAACATTTTCTGAA+TGG - chr3.2:82545325-82545344 None:intergenic 35.0%
! AGTTAGAAGCTTTTGCTAGT+AGG + chr3.2:82544593-82544612 MS.gene055498:CDS 35.0%
! GAGTTGTTGTTGAACATCTT+TGG - chr3.2:82544218-82544237 None:intergenic 35.0%
! GGAAGGTCTTAATAGAGTTT+TGG + chr3.2:82544708-82544727 MS.gene055498:CDS 35.0%
! GTTAGAAGCTTTTGCTAGTA+GGG + chr3.2:82544594-82544613 MS.gene055498:CDS 35.0%
! TTCTCTAAGCTTTTCCTTCT+TGG - chr3.2:82545301-82545320 None:intergenic 35.0%
!! AAATACCCGGTTAGCTTAAT+GGG - chr3.2:82544262-82544281 None:intergenic 35.0%
!! GATATTGATTCAGCTGAGAT+TGG + chr3.2:82544634-82544653 MS.gene055498:CDS 35.0%
!! TAAATACCCGGTTAGCTTAA+TGG - chr3.2:82544263-82544282 None:intergenic 35.0%
!!! AGCTTTTTTCCTTGCAACTT+CGG + chr3.2:82544162-82544181 MS.gene055498:CDS 35.0%
!!! GGTTTTTGGTTTGTTGAGAA+TGG - chr3.2:82543609-82543628 None:intergenic 35.0%
AAAGCTTCTTTGACAACCCT+AGG - chr3.2:82544148-82544167 None:intergenic 40.0%
ACATCAAGAAGATAAGGACC+AGG - chr3.2:82545348-82545367 None:intergenic 40.0%
ACTAGGAATCTTAGGTAACC+TGG - chr3.2:82544287-82544306 None:intergenic 40.0%
AGAGAATGTTCACCTCCAAT+AGG - chr3.2:82544469-82544488 None:intergenic 40.0%
AGGTAACCTGGATAAATACC+CGG - chr3.2:82544275-82544294 None:intergenic 40.0%
ATCCTTGAATGAACCATTGC+TGG - chr3.2:82545409-82545428 None:intergenic 40.0%
ATCTGGGTATGGTTGTTCAA+TGG + chr3.2:82545151-82545170 MS.gene055498:CDS 40.0%
ATGGGAGGATAGATTCTACA+AGG + chr3.2:82545170-82545189 MS.gene055498:CDS 40.0%
ATTCAAGGATGTGATCACTG+AGG + chr3.2:82545419-82545438 MS.gene055498:CDS 40.0%
CAGCAAATCCAAGCATGTTA+GGG - chr3.2:82545248-82545267 None:intergenic 40.0%
CCACCACCAACATATAAAAC+AGG - chr3.2:82544358-82544377 None:intergenic 40.0%
CCTGTTGCTAGTACTTTGAT+GGG + chr3.2:82544430-82544449 MS.gene055498:CDS 40.0%
CTTTCAATGTTGGGTATGCA+TGG + chr3.2:82544487-82544506 MS.gene055498:CDS 40.0%
GAATAGAAAGGAGATCTGGA+AGG - chr3.2:82543536-82543555 None:intergenic 40.0%
GAGAATGTTCACCTCCAATA+GGG - chr3.2:82544468-82544487 None:intergenic 40.0%
GCTAGTACTTTGATGGGATT+AGG + chr3.2:82544436-82544455 MS.gene055498:CDS 40.0%
GGTGATGCTATTGTTAGTAC+TGG + chr3.2:82544880-82544899 MS.gene055498:CDS 40.0%
GTGCTTGATGAATTGACGAA+TGG + chr3.2:82544859-82544878 MS.gene055498:CDS 40.0%
GTTACCTAAGATTCCTAGTG+AGG + chr3.2:82544288-82544307 MS.gene055498:CDS 40.0%
TAAGGCTTCAACGAGAATGT+CGG - chr3.2:82543753-82543772 None:intergenic 40.0%
TCAGCAAATCCAAGCATGTT+AGG - chr3.2:82545249-82545268 None:intergenic 40.0%
TCCTGTTGCTAGTACTTTGA+TGG + chr3.2:82544429-82544448 MS.gene055498:CDS 40.0%
TCCTTGAATGAACCATTGCT+GGG - chr3.2:82545408-82545427 None:intergenic 40.0%
TCTGGGTATGGTTGTTCAAT+GGG + chr3.2:82545152-82545171 MS.gene055498:CDS 40.0%
TGGAGAGTAAAGGAATCAAG+GGG + chr3.2:82544728-82544747 MS.gene055498:CDS 40.0%
TTCAAGGATGTGATCACTGA+GGG + chr3.2:82545420-82545439 MS.gene055498:CDS 40.0%
TTGGGTACATCAATGAGAAC+CGG - chr3.2:82544199-82544218 None:intergenic 40.0%
TTTGGATTACCTGCTGCTAT+TGG + chr3.2:82544994-82545013 MS.gene055498:CDS 40.0%
! CAAGGGGAAACTTGATTTTG+AGG + chr3.2:82544744-82544763 MS.gene055498:CDS 40.0%
! CGGTGTTTCTTGAAAAGCAT+CGG - chr3.2:82544062-82544081 None:intergenic 40.0%
! GAGAATGTTACGGATGGTTT+TGG - chr3.2:82543852-82543871 None:intergenic 40.0%
! GAGATTTTCCCTAACATGCT+TGG + chr3.2:82545237-82545256 MS.gene055498:CDS 40.0%
! GGATTAGGTTGTTACCCTAT+TGG + chr3.2:82544451-82544470 MS.gene055498:CDS 40.0%
! TTAGGTTGTTACCCTATTGG+AGG + chr3.2:82544454-82544473 MS.gene055498:CDS 40.0%
! TTATCTTGGTGACCCTTCTA+AGG + chr3.2:82545209-82545228 MS.gene055498:CDS 40.0%
!! AGTGATCTGTTGCTTGCTTT+TGG + chr3.2:82544541-82544560 MS.gene055498:CDS 40.0%
!! CCTGTTTTATATGTTGGTGG+TGG + chr3.2:82544355-82544374 MS.gene055498:CDS 40.0%
!! GCTATTGTTAGTACTGGTGT+TGG + chr3.2:82544886-82544905 MS.gene055498:CDS 40.0%
!! GTGATCTGTTGCTTGCTTTT+GGG + chr3.2:82544542-82544561 MS.gene055498:CDS 40.0%
!! TGATCTGTTGCTTGCTTTTG+GGG + chr3.2:82544543-82544562 MS.gene055498:CDS 40.0%
!!! AACTTGATTTTGAGGCATGG+AGG + chr3.2:82544752-82544771 MS.gene055498:CDS 40.0%
!!! GCTTTTTTCCTTGCAACTTC+GGG + chr3.2:82544163-82544182 MS.gene055498:CDS 40.0%
!!! GGAAACTTGATTTTGAGGCA+TGG + chr3.2:82544749-82544768 MS.gene055498:CDS 40.0%
!!! TGTTACGGATGGTTTTGGAA+CGG - chr3.2:82543847-82543866 None:intergenic 40.0%
AAAACCACTCACTCTCGTGT+CGG + chr3.2:82543623-82543642 MS.gene055498:CDS 45.0%
AAAGTGGGGTGCGAATAGAA+AGG - chr3.2:82543548-82543567 None:intergenic 45.0%
AACAACTCGCTGTTCCGAAT+TGG + chr3.2:82544230-82544249 MS.gene055498:CDS 45.0%
AGATCTGGAAGGAGTAGTAG+TGG - chr3.2:82543525-82543544 None:intergenic 45.0%
AGCACCTGAATAGCATACTG+AGG - chr3.2:82544844-82544863 None:intergenic 45.0%
AGCTAACCGGGTATTTATCC+AGG + chr3.2:82544266-82544285 MS.gene055498:CDS 45.0%
AGTATAAGAGACCTAGGCAG+TGG + chr3.2:82544941-82544960 MS.gene055498:CDS 45.0%
CACCAGTTAACTCCACAAAC+CGG - chr3.2:82544408-82544427 None:intergenic 45.0%
CAGAAAATGTTGGACACTCC+TGG + chr3.2:82545327-82545346 MS.gene055498:CDS 45.0%
GAACCATTGCTGGGAATCAT+TGG - chr3.2:82545399-82545418 None:intergenic 45.0%
GAGGAGAAACGAGAGATGAA+TGG - chr3.2:82543710-82543729 None:intergenic 45.0%
GATTTGTGCGGATATGAAGG+TGG + chr3.2:82544681-82544700 MS.gene055498:CDS 45.0%
GGCAATACATGCTCTTGATG+AGG - chr3.2:82545378-82545397 None:intergenic 45.0%
GTGCGAATAGAAAGGAGATC+TGG - chr3.2:82543540-82543559 None:intergenic 45.0%
GTGTTGGACAGCATCAAATG+TGG + chr3.2:82544902-82544921 MS.gene055498:CDS 45.0%
TCCCAGCAATGGTTCATTCA+AGG + chr3.2:82545404-82545423 MS.gene055498:CDS 45.0%
TGGGTACATCAATGAGAACC+GGG - chr3.2:82544198-82544217 None:intergenic 45.0%
TGTTGAGAATGGGAGAGAGA+GGG - chr3.2:82543598-82543617 None:intergenic 45.0%
TTCGCCTCAGTATGCTATTC+AGG + chr3.2:82544837-82544856 MS.gene055498:CDS 45.0%
TTGCCAATGATTCCCAGCAA+TGG + chr3.2:82545393-82545412 MS.gene055498:CDS 45.0%
TTGTTGAGAATGGGAGAGAG+AGG - chr3.2:82543599-82543618 None:intergenic 45.0%
! ACACGAGAGTGAGTGGTTTT+TGG - chr3.2:82543623-82543642 None:intergenic 45.0%
! CCCATCAAAGTACTAGCAAC+AGG - chr3.2:82544433-82544452 None:intergenic 45.0%
! CGCAGTTAGAACAGGTTTTG+AGG + chr3.2:82544311-82544330 MS.gene055498:CDS 45.0%
!! AACCGGTTTGTGGAGTTAAC+TGG + chr3.2:82544403-82544422 MS.gene055498:CDS 45.0%
!! CTTGGATTTGCTGATGCTTG+CGG + chr3.2:82545255-82545274 MS.gene055498:CDS 45.0%
!! GTCGATTTGTGCGGATATGA+AGG + chr3.2:82544678-82544697 MS.gene055498:CDS 45.0%
!! TCCACATGTGTCGATTTGTG+CGG + chr3.2:82544669-82544688 MS.gene055498:CDS 45.0%
!! TGAGGAATTGAACCGGTTTG+TGG + chr3.2:82544393-82544412 MS.gene055498:CDS 45.0%
!! TGGTTAACTTCTGGTGGACT+TGG + chr3.2:82544961-82544980 MS.gene055498:CDS 45.0%
!! TTAATGGGCTCGGACCAATT+CGG - chr3.2:82544247-82544266 None:intergenic 45.0%
!!! GTTACGGATGGTTTTGGAAC+GGG - chr3.2:82543846-82543865 None:intergenic 45.0%
!!! TGTTGCTTGCTTTTGGGGTT+AGG + chr3.2:82544548-82544567 MS.gene055498:CDS 45.0%
AGAAGTGGCGATACAAACGC+CGG - chr3.2:82543936-82543955 None:intergenic 50.0%
AGACTCCACCTTGTTCGTGA+CGG - chr3.2:82543877-82543896 None:intergenic 50.0%
AGAGAGAGGGAATGTGAGTG+TGG - chr3.2:82543585-82543604 None:intergenic 50.0%
AGAGATGAATGGCTCGTCGT+CGG - chr3.2:82543699-82543718 None:intergenic 50.0%
AGGCAGTGGTTAACTTCTGG+TGG + chr3.2:82544955-82544974 MS.gene055498:CDS 50.0%
CAAGTTCCCCGGAGAATGAT+CGG + chr3.2:82544034-82544053 MS.gene055498:CDS 50.0%
CCAGAAGTTAACCACTGCCT+AGG - chr3.2:82544955-82544974 None:intergenic 50.0%
CCTAGGCAGTGGTTAACTTC+TGG + chr3.2:82544952-82544971 MS.gene055498:CDS 50.0%
CTATTACCGGTCAAGTTCCC+CGG + chr3.2:82544023-82544042 MS.gene055498:CDS 50.0%
GACCGGTAATAGCGATGAGA+GGG - chr3.2:82544015-82544034 None:intergenic 50.0%
GATGTGATCACTGAGGGTGA+TGG + chr3.2:82545426-82545445 MS.gene055498:CDS 50.0%
GGGTATGGTTGTTCAATGGG+AGG + chr3.2:82545155-82545174 MS.gene055498:CDS 50.0%
GTCCCTCTCATCGCTATTAC+CGG + chr3.2:82544010-82544029 MS.gene055498:CDS 50.0%
GTCGTTGATATTGACGGGGA+TGG + chr3.2:82545045-82545064 MS.gene055498:CDS 50.0%
GTGGTGCGTTTAGGGAAAGT+GGG - chr3.2:82543563-82543582 None:intergenic 50.0%
GTTGAAGCCTTAGAACGCGA+AGG + chr3.2:82543761-82543780 MS.gene055498:CDS 50.0%
TACATCAATGAGAACCGGGC+CGG - chr3.2:82544194-82544213 None:intergenic 50.0%
TAGTGAGGCGCAGTTAGAAC+AGG + chr3.2:82544303-82544322 MS.gene055498:CDS 50.0%
TCCGAGCCCATTAAGCTAAC+CGG + chr3.2:82544253-82544272 MS.gene055498:CDS 50.0%
TCCGCACAAATCGACACATG+TGG - chr3.2:82544673-82544692 None:intergenic 50.0%
TCTGGAAGGAGTAGTAGTGG+TGG - chr3.2:82543522-82543541 None:intergenic 50.0%
TGACCGGTAATAGCGATGAG+AGG - chr3.2:82544016-82544035 None:intergenic 50.0%
TGCGCCTCACTAGGAATCTT+AGG - chr3.2:82544295-82544314 None:intergenic 50.0%
TGGTGCGTTTAGGGAAAGTG+GGG - chr3.2:82543562-82543581 None:intergenic 50.0%
TGTTCTAACTGCGCCTCACT+AGG - chr3.2:82544304-82544323 None:intergenic 50.0%
! AGAATGTCGGAGCCTTTTCG+GGG - chr3.2:82543740-82543759 None:intergenic 50.0%
! ATCGGTTCCGATCATTCTCC+GGG - chr3.2:82544044-82544063 None:intergenic 50.0%
! CGAGAATGTCGGAGCCTTTT+CGG - chr3.2:82543742-82543761 None:intergenic 50.0%
! GAGAATGTCGGAGCCTTTTC+GGG - chr3.2:82543741-82543760 None:intergenic 50.0%
! GATATGAAGGTGGCGTTGGA+AGG + chr3.2:82544691-82544710 MS.gene055498:CDS 50.0%
! TATCCATCAAAGCGTCTGCG+AGG - chr3.2:82543988-82544007 None:intergenic 50.0%
! TCTTGGTGACCCTTCTAAGG+AGG + chr3.2:82545212-82545231 MS.gene055498:CDS 50.0%
! TGAGTGTGGTGGTGCGTTTA+GGG - chr3.2:82543571-82543590 None:intergenic 50.0%
!! CATCGGTTCCGATCATTCTC+CGG - chr3.2:82544045-82544064 None:intergenic 50.0%
!! TCACTGAGGGTGATGGAAGA+AGG + chr3.2:82545433-82545452 MS.gene055498:CDS 50.0%
!! TCTGGTGGACTTGGTGCTAT+GGG + chr3.2:82544970-82544989 MS.gene055498:CDS 50.0%
!! TTCTGGTGGACTTGGTGCTA+TGG + chr3.2:82544969-82544988 MS.gene055498:CDS 50.0%
!!! GGACTTGGTGCTATGGGTTT+TGG + chr3.2:82544976-82544995 MS.gene055498:CDS 50.0%
!!! TGATTTTGAGGCATGGAGGC+AGG + chr3.2:82544756-82544775 MS.gene055498:CDS 50.0%
!!! TTTTGGAACGGGTGAGAGCT+TGG - chr3.2:82543835-82543854 None:intergenic 50.0%
AACGTCTTCGCTTACCCTGG+CGG + chr3.2:82543791-82543810 MS.gene055498:CDS 55.0%
ACAGCAGCACCAATAGCAGC+AGG - chr3.2:82545006-82545025 None:intergenic 55.0%
ACATCAATGAGAACCGGGCC+GGG - chr3.2:82544193-82544212 None:intergenic 55.0%
ACCAACGTCTTCGCTTACCC+TGG + chr3.2:82543788-82543807 MS.gene055498:CDS 55.0%
ACGGGGGAGAATGTTACGGA+TGG - chr3.2:82543858-82543877 None:intergenic 55.0%
ACTCCACCTTGTTCGTGACG+GGG - chr3.2:82543875-82543894 None:intergenic 55.0%
ATTCTCCCCCGTCACGAACA+AGG + chr3.2:82543866-82543885 MS.gene055498:CDS 55.0%
CATTCTCCGGGGAACTTGAC+CGG - chr3.2:82544032-82544051 None:intergenic 55.0%
CCGAGCCCATTAAGCTAACC+GGG + chr3.2:82544254-82544273 MS.gene055498:CDS 55.0%
CTTCTTGGTCACACGAGCAG+CGG - chr3.2:82545286-82545305 None:intergenic 55.0%
GAAGTGGCGATACAAACGCC+GGG - chr3.2:82543935-82543954 None:intergenic 55.0%
GACTCCACCTTGTTCGTGAC+GGG - chr3.2:82543876-82543895 None:intergenic 55.0%
GAGAGGGAATGTGAGTGTGG+TGG - chr3.2:82543582-82543601 None:intergenic 55.0%
GATACAAACGCCGGGAAGAC+CGG - chr3.2:82543927-82543946 None:intergenic 55.0%
GATTCCGACACGAGAGTGAG+TGG - chr3.2:82543630-82543649 None:intergenic 55.0%
GGCGTTTGTATCGCCACTTC+TGG + chr3.2:82543935-82543954 MS.gene055498:CDS 55.0%
GGTAACGCCTTCGCGTTCTA+AGG - chr3.2:82543771-82543790 None:intergenic 55.0%
GGTGGTGCGTTTAGGGAAAG+TGG - chr3.2:82543564-82543583 None:intergenic 55.0%
TCGGTTCCGATCATTCTCCG+GGG - chr3.2:82544043-82544062 None:intergenic 55.0%
TGCGGATATGAAGGTGGCGT+TGG + chr3.2:82544687-82544706 MS.gene055498:CDS 55.0%
TGTATCGCCACTTCTGGTCC+CGG + chr3.2:82543941-82543960 MS.gene055498:CDS 55.0%
TTCTTGGTCACACGAGCAGC+GGG - chr3.2:82545285-82545304 None:intergenic 55.0%
! CGTGACGGGGGAGAATGTTA+CGG - chr3.2:82543862-82543881 None:intergenic 55.0%
! GAGAGCTTGGTGGATCTCCA+TGG - chr3.2:82543822-82543841 None:intergenic 55.0%
! GGTGCCACCAACTTAGTCAG+CGG + chr3.2:82543962-82543981 MS.gene055498:CDS 55.0%
! GTGAGTGTGGTGGTGCGTTT+AGG - chr3.2:82543572-82543591 None:intergenic 55.0%
!! CCCGGTTAGCTTAATGGGCT+CGG - chr3.2:82544257-82544276 None:intergenic 55.0%
!! CTGACTAAGTTGGTGGCACC+GGG - chr3.2:82543962-82543981 None:intergenic 55.0%
!! GCTGACTAAGTTGGTGGCAC+CGG - chr3.2:82543963-82543982 None:intergenic 55.0%
CATCAATGAGAACCGGGCCG+GGG - chr3.2:82544192-82544211 None:intergenic 60.0%
CGCTGCTCGTGTGACCAAGA+AGG + chr3.2:82545284-82545303 MS.gene055498:CDS 60.0%
CTCCACCTTGTTCGTGACGG+GGG - chr3.2:82543874-82543893 None:intergenic 60.0%
GAAGGCTACGCTCGCTCATC+CGG + chr3.2:82543905-82543924 MS.gene055498:CDS 60.0%
GATGAATGGCTCGTCGTCGG+TGG - chr3.2:82543696-82543715 None:intergenic 60.0%
GCCAGGGTAAGCGAAGACGT+TGG - chr3.2:82543792-82543811 None:intergenic 60.0%
GGATGAGCGAGCGTAGCCTT+CGG - chr3.2:82543906-82543925 None:intergenic 60.0%
TCCTCCACCCAACCCCGAAA+AGG + chr3.2:82543725-82543744 MS.gene055498:CDS 60.0%
TGGAACGGGTGAGAGCTTGG+TGG - chr3.2:82543832-82543851 None:intergenic 60.0%
TGGTGCGGTGGAGGGTTTGA+GGG - chr3.2:82543660-82543679 None:intergenic 60.0%
! GAGGCCGCTGACTAAGTTGG+TGG - chr3.2:82543969-82543988 None:intergenic 60.0%
! TGCGAGGCCGCTGACTAAGT+TGG - chr3.2:82543972-82543991 None:intergenic 60.0%
!! GTCGGAGCCTTTTCGGGGTT+GGG - chr3.2:82543735-82543754 None:intergenic 60.0%
!! TGTCGGAGCCTTTTCGGGGT+TGG - chr3.2:82543736-82543755 None:intergenic 60.0%
CGGCCTCGCAGACGCTTTGA+TGG + chr3.2:82543982-82544001 MS.gene055498:CDS 65.0%
CTCCCCCGTCACGAACAAGG+TGG + chr3.2:82543869-82543888 MS.gene055498:CDS 65.0%
GAATGGCTCGTCGTCGGTGG+TGG - chr3.2:82543693-82543712 None:intergenic 65.0%
GCTCGCTCATCCGGTCTTCC+CGG + chr3.2:82543914-82543933 MS.gene055498:CDS 65.0%
GTGGAAGGTGGTGCGGTGGA+GGG - chr3.2:82543668-82543687 None:intergenic 65.0%
GTGGTGCGGTGGAGGGTTTG+AGG - chr3.2:82543661-82543680 None:intergenic 65.0%
TGAGCGAGCGTAGCCTTCGG+CGG - chr3.2:82543903-82543922 None:intergenic 65.0%
TTACCCTGGCGGCGCTTCCA+TGG + chr3.2:82543802-82543821 MS.gene055498:CDS 65.0%
!! ATCTCCATGGAAGCGCCGCC+AGG - chr3.2:82543809-82543828 None:intergenic 65.0%
!! GCCTTTTCGGGGTTGGGTGG+AGG - chr3.2:82543729-82543748 None:intergenic 65.0%
!! GGAGCCTTTTCGGGGTTGGG+TGG - chr3.2:82543732-82543751 None:intergenic 65.0%
!! GGTGGTGGTGGAAGGTGGTG+CGG - chr3.2:82543675-82543694 None:intergenic 65.0%
!! TCGGTGGTGGTGGTGGAAGG+TGG - chr3.2:82543680-82543699 None:intergenic 65.0%
!! TCGTCGGTGGTGGTGGTGGA+AGG - chr3.2:82543683-82543702 None:intergenic 65.0%
!! TCTCCATGGAAGCGCCGCCA+GGG - chr3.2:82543808-82543827 None:intergenic 65.0%
CAATGAGAACCGGGCCGGGG+CGG - chr3.2:82544189-82544208 None:intergenic 70.0%
CTTGCAACTTCGGGCCGCCC+CGG + chr3.2:82544172-82544191 MS.gene055498:CDS 70.0%
GGTGGAAGGTGGTGCGGTGG+AGG - chr3.2:82543669-82543688 None:intergenic 70.0%
GGTGGAGTCTTCGCCGCCGA+AGG + chr3.2:82543887-82543906 MS.gene055498:CDS 70.0%
! GGTGGCACCGGGACCAGAAG+TGG - chr3.2:82543951-82543970 None:intergenic 70.0%
! TGGCTCGTCGTCGGTGGTGG+TGG - chr3.2:82543690-82543709 None:intergenic 70.0%
!! CTCGTCGTCGGTGGTGGTGG+TGG - chr3.2:82543687-82543706 None:intergenic 70.0%
!! GGTGGTGGAAGGTGGTGCGG+TGG - chr3.2:82543672-82543691 None:intergenic 70.0%
CGGGGCGGCCCGAAGTTGCA+AGG - chr3.2:82544174-82544193 None:intergenic 75.0%
! AACTTCGGGCCGCCCCGGCC+CGG + chr3.2:82544177-82544196 MS.gene055498:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 82543512 82545464 82543512 ID=MS.gene055498
chr3.2 mRNA 82543512 82545464 82543512 ID=MS.gene055498.t1;Parent=MS.gene055498
chr3.2 exon 82543512 82545464 82543512 ID=MS.gene055498.t1.exon1;Parent=MS.gene055498.t1
chr3.2 CDS 82543512 82545464 82543512 ID=cds.MS.gene055498.t1;Parent=MS.gene055498.t1
Gene Sequence

>MS.gene055498

ATGGCAGCCACCACTACTACTCCTTCCAGATCTCCTTTCTATTCGCACCCCACTTTCCCTAAACGCACCACCACACTCACATTCCCTCTCTCTCCCATTCTCAACAAACCAAAAACCACTCACTCTCGTGTCGGAATCTCATGCTCCCTCAAACCCTCCACCGCACCACCTTCCACCACCACCACCGACGACGAGCCATTCATCTCTCGTTTCTCCTCCACCCAACCCCGAAAAGGCTCCGACATTCTCGTTGAAGCCTTAGAACGCGAAGGCGTTACCAACGTCTTCGCTTACCCTGGCGGCGCTTCCATGGAGATCCACCAAGCTCTCACCCGTTCCAAAACCATCCGTAACATTCTCCCCCGTCACGAACAAGGTGGAGTCTTCGCCGCCGAAGGCTACGCTCGCTCATCCGGTCTTCCCGGCGTTTGTATCGCCACTTCTGGTCCCGGTGCCACCAACTTAGTCAGCGGCCTCGCAGACGCTTTGATGGATAGTGTCCCTCTCATCGCTATTACCGGTCAAGTTCCCCGGAGAATGATCGGAACCGATGCTTTTCAAGAAACACCGATAGTTGAAGTAACGAGATCTATCACAAAGCATAACTATCTCATTCTTGATGTTGAAGATATTCCTAGGGTTGTCAAAGAAGCTTTTTTCCTTGCAACTTCGGGCCGCCCCGGCCCGGTTCTCATTGATGTACCCAAAGATGTTCAACAACAACTCGCTGTTCCGAATTGGTCCGAGCCCATTAAGCTAACCGGGTATTTATCCAGGTTACCTAAGATTCCTAGTGAGGCGCAGTTAGAACAGGTTTTGAGGTTGTTGTTTGAATCTAAAAAACCTGTTTTATATGTTGGTGGTGGTTGTTTGAATTCTAGTGAGGAATTGAACCGGTTTGTGGAGTTAACTGGTGTTCCTGTTGCTAGTACTTTGATGGGATTAGGTTGTTACCCTATTGGAGGTGAACATTCTCTTTCAATGTTGGGTATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAATAGTGATCTGTTGCTTGCTTTTGGGGTTAGGTTTGATGATAGAGTTACTGGAAAGTTAGAAGCTTTTGCTAGTAGGGCTAAGATTGTTCATATAGATATTGATTCAGCTGAGATTGGGAAGAATAAGATTCCACATGTGTCGATTTGTGCGGATATGAAGGTGGCGTTGGAAGGTCTTAATAGAGTTTTGGAGAGTAAAGGAATCAAGGGGAAACTTGATTTTGAGGCATGGAGGCAGGAGTTGAATGTGCAGAAGTTGAAATTTCCTCTTGGTTTTAAGACATTTGAGGATGCAATTTCGCCTCAGTATGCTATTCAGGTGCTTGATGAATTGACGAATGGTGATGCTATTGTTAGTACTGGTGTTGGACAGCATCAAATGTGGTCTGCTCAGTTTTACAAGTATAAGAGACCTAGGCAGTGGTTAACTTCTGGTGGACTTGGTGCTATGGGTTTTGGATTACCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCAATAGTCGTTGATATTGACGGGGATGGTAGTTTTATAATGAACGTTCAAGAGTTGGCGACTATAAGAGTAGAGAATCTTCCGGTTAAGATCCTGTTGTTGAATAATCAACATCTGGGTATGGTTGTTCAATGGGAGGATAGATTCTACAAGGCAAATAGGGCTCATACTTATCTTGGTGACCCTTCTAAGGAGGATGAGATTTTCCCTAACATGCTTGGATTTGCTGATGCTTGCGGAATACCCGCTGCTCGTGTGACCAAGAAGGAAAAGCTTAGAGAAGCCATTCAGAAAATGTTGGACACTCCTGGTCCTTATCTTCTTGATGTTATTGTACCTCATCAAGAGCATGTATTGCCAATGATTCCCAGCAATGGTTCATTCAAGGATGTGATCACTGAGGGTGATGGAAGAAGGAGTTATTGA
Protein sequence

>MS.gene055498.t1

MAATTTTPSRSPFYSHPTFPKRTTTLTFPLSPILNKPKTTHSRVGISCSLKPSTAPPSTTTTDDEPFISRFSSTQPRKGSDILVEALEREGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVEDIPRVVKEAFFLATSGRPGPVLIDVPKDVQQQLAVPNWSEPIKLTGYLSRLPKIPSEAQLEQVLRLLFESKKPVLYVGGGCLNSSEELNRFVELTGVPVASTLMGLGCYPIGGEHSLSMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADMKVALEGLNRVLESKGIKGKLDFEAWRQELNVQKLKFPLGFKTFEDAISPQYAIQVLDELTNGDAIVSTGVGQHQMWSAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSKEDEIFPNMLGFADACGIPAARVTKKEKLREAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRRSY