AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38605

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38605.t1 MTR_3g099190 96.918 649 20 0 2 650 3 651 0.0 1296
MS.gene38605.t1 MTR_2g013120 78.704 648 130 3 4 650 15 655 0.0 1065
MS.gene38605.t1 MTR_2g027220 83.227 626 86 5 7 628 3 613 0.0 1060
MS.gene38605.t1 MTR_6g004200 25.389 579 365 20 79 621 6 553 3.48e-35 140
MS.gene38605.t1 MTR_7g069540 24.731 558 363 20 34 569 11 533 2.38e-20 95.9
MS.gene38605.t1 MTR_5g046610 23.364 535 361 17 58 569 27 535 9.69e-20 94.0
MS.gene38605.t1 MTR_4g017200 23.377 539 364 17 54 569 23 535 1.35e-19 93.6
MS.gene38605.t1 MTR_2g009330 21.797 601 392 20 57 625 34 588 1.11e-17 87.4
MS.gene38605.t1 MTR_2g027200 53.226 62 10 1 550 611 1 43 4.17e-16 73.2
MS.gene38605.t1 MTR_2g015560 22.761 536 362 16 54 567 3 508 1.12e-14 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38605.t1 AT3G48560 83.276 586 98 0 65 650 85 670 0.0 1036
MS.gene38605.t1 AT5G17380 28.351 582 353 18 73 621 7 557 5.79e-47 175
MS.gene38605.t1 AT5G01330 24.760 521 322 18 83 569 36 520 6.90e-23 103
MS.gene38605.t1 AT5G01320 23.623 563 361 17 42 569 3 531 8.73e-23 103
MS.gene38605.t1 AT4G33070 23.552 518 332 15 83 569 51 535 1.28e-20 96.7
MS.gene38605.t1 AT5G54960 23.307 502 349 14 83 567 51 533 9.95e-18 87.4

Find 196 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTTGGTGCTATGGGTTT+TGG 0.185895 3.1:-79265675 MS.gene38605:CDS
AGTGATCTGTTGCTTGCTTT+TGG 0.224503 3.1:-79266110 MS.gene38605:CDS
TAAATACCCGGTTAGCTTAA+TGG 0.255425 3.1:+79266391 None:intergenic
GAGAATGTTACGGATGGTTT+TGG 0.263072 3.1:+79266802 None:intergenic
GGTGGAAGGTGGTGCGGTGG+AGG 0.278151 3.1:+79266985 None:intergenic
TTCGCCTCAGTATGCTATTC+AGG 0.285179 3.1:-79265814 MS.gene38605:CDS
GTGAGTGTGGTGGTGCGTTT+AGG 0.296862 3.1:+79267082 None:intergenic
AGGTTTGATGATAGAGTTAC+TGG 0.302099 3.1:-79266083 MS.gene38605:CDS
TTTGGATTACCTGCTGCTAT+TGG 0.306470 3.1:-79265657 MS.gene38605:CDS
TTATCTTGGTGACCCTTCTA+AGG 0.316866 3.1:-79265442 MS.gene38605:CDS
TCAGCAAATCCAAGCATGTT+AGG 0.319955 3.1:+79265405 None:intergenic
GGAAGGTCTTAATAGAGTTT+TGG 0.325965 3.1:-79265943 MS.gene38605:CDS
GGCGTTTGTATCGCCACTTC+TGG 0.330304 3.1:-79266716 MS.gene38605:CDS
GAGTTGTTGTTGAACATCTT+TGG 0.336827 3.1:+79266436 None:intergenic
GGTAACGCCTTCGCGTTCTA+AGG 0.337243 3.1:+79266883 None:intergenic
AAAATCTCATCCTCCTTAGA+AGG 0.349687 3.1:+79265429 None:intergenic
TCCTGTTGCTAGTACTTTGA+TGG 0.351983 3.1:-79266222 MS.gene38605:CDS
GCTCGCTCATCCGGTCTTCC+CGG 0.355441 3.1:-79266737 MS.gene38605:CDS
TTCTGGTGGACTTGGTGCTA+TGG 0.360161 3.1:-79265682 MS.gene38605:CDS
AAATACCCGGTTAGCTTAAT+GGG 0.368189 3.1:+79266392 None:intergenic
GATATTGATTCAGCTGAGAT+TGG 0.373548 3.1:-79266017 MS.gene38605:CDS
ATCCTTGAATGAACCATTGC+TGG 0.373588 3.1:+79265245 None:intergenic
GTCCCTCTCATCGCTATTAC+CGG 0.374961 3.1:-79266641 MS.gene38605:CDS
GCTAGTACTTTGATGGGATT+AGG 0.375995 3.1:-79266215 MS.gene38605:CDS
GTTGTTGAATAATCAACATC+TGG 0.376276 3.1:-79265517 MS.gene38605:CDS
GGATTAGGTTGTTACCCTAT+TGG 0.378851 3.1:-79266200 MS.gene38605:CDS
TGCGCCTCACTAGGAATCTT+AGG 0.383660 3.1:+79266359 None:intergenic
ATCTCCATGGAAGCGCCGCC+AGG 0.383879 3.1:+79266845 None:intergenic
AACTTCGGGCCGCCCCGGCC+CGG 0.389700 3.1:-79266474 MS.gene38605:CDS
AACCGGTTTGTGGAGTTAAC+TGG 0.389714 3.1:-79266248 MS.gene38605:CDS
CGGCCTCGCAGACGCTTTGA+TGG 0.390497 3.1:-79266669 MS.gene38605:CDS
AGAGAATGTTCACCTCCAAT+AGG 0.394457 3.1:+79266185 None:intergenic
TGGTTAACTTCTGGTGGACT+TGG 0.398980 3.1:-79265690 MS.gene38605:CDS
AGTTGTTGTTGAACATCTTT+GGG 0.400294 3.1:+79266437 None:intergenic
CTCGTCGTCGTCGGTGGTGG+TGG 0.407653 3.1:+79266967 None:intergenic
TCCGAGCCCATTAAGCTAAC+CGG 0.409009 3.1:-79266398 MS.gene38605:CDS
GAACATTCTCTTTCAATGTT+GGG 0.410408 3.1:-79266173 MS.gene38605:CDS
AATAGAGCTCATACTTATCT+TGG 0.410570 3.1:-79265456 MS.gene38605:CDS
TGAGTGTGGTGGTGCGTTTA+GGG 0.415471 3.1:+79267083 None:intergenic
AACAACTCGCTGTTCCGAAT+TGG 0.416644 3.1:-79266421 MS.gene38605:CDS
GTGGAAGGTGGTGCGGTGGA+GGG 0.417842 3.1:+79266986 None:intergenic
GATGTTGATTATTCAACAAC+AGG 0.420055 3.1:+79265520 None:intergenic
GGTGGTGGAAGGTGGTGCGG+TGG 0.422838 3.1:+79266982 None:intergenic
GAACCATTGCTGGGAATCAT+TGG 0.422917 3.1:+79265255 None:intergenic
CTTGCAACTTCGGGCCGCCC+CGG 0.427247 3.1:-79266479 MS.gene38605:CDS
GGTGGTGCGTTTAGGGAAAG+TGG 0.430981 3.1:+79267090 None:intergenic
TGAACATTCTCTTTCAATGT+TGG 0.431403 3.1:-79266174 MS.gene38605:CDS
ACATCAATGAGAACCGGGCC+GGG 0.431424 3.1:+79266461 None:intergenic
TTGGAGAGTAAAGGAGTCAA+GGG 0.432161 3.1:-79265924 MS.gene38605:CDS
GAAGGCTACGCTCGCTCATC+CGG 0.435119 3.1:-79266746 MS.gene38605:CDS
AGCTAACCGGGTATTTATCC+AGG 0.435277 3.1:-79266385 MS.gene38605:CDS
CCTAGGCAGTGGTTAACTTC+TGG 0.436210 3.1:-79265699 MS.gene38605:CDS
CATTCTCCGGGGAACTTGAC+CGG 0.442229 3.1:+79266622 None:intergenic
TTGATGTTGAAGATATTCCT+AGG 0.443087 3.1:-79266523 MS.gene38605:CDS
GACTCCACCTTGTTCGTGAC+GGG 0.443115 3.1:+79266778 None:intergenic
ATATCAACGACTATTGCATC+AGG 0.443402 3.1:+79265618 None:intergenic
TTCAACAACAGGATCTTAAC+CGG 0.445446 3.1:+79265531 None:intergenic
ATCGGTTCCGATCATTCTCC+GGG 0.445677 3.1:+79266610 None:intergenic
TGGTGCGGTGGAGGGTTTGA+GGG 0.447339 3.1:+79266994 None:intergenic
TAGTGAGGCGCAGTTAGAAC+AGG 0.448177 3.1:-79266348 MS.gene38605:CDS
ATCTGGGTATGGTTGTTCAA+TGG 0.448201 3.1:-79265500 MS.gene38605:CDS
TTGGGTACATCAATGAGAAC+CGG 0.448716 3.1:+79266455 None:intergenic
TCTGGTGGACTTGGTGCTAT+GGG 0.449060 3.1:-79265681 MS.gene38605:CDS
CATCGGTTCCGATCATTCTC+CGG 0.449609 3.1:+79266609 None:intergenic
GTGGTGCGGTGGAGGGTTTG+AGG 0.449683 3.1:+79266993 None:intergenic
CCCATCAAAGTACTAGCAAC+AGG 0.449704 3.1:+79266221 None:intergenic
CCCGGTTAGCTTAATGGGCT+CGG 0.459364 3.1:+79266397 None:intergenic
TCTGGGTATGGTTGTTCAAT+GGG 0.460755 3.1:-79265499 MS.gene38605:CDS
GCTGACTAAGTTGGTGGCAC+CGG 0.460794 3.1:+79266691 None:intergenic
CAATAGTCGTTGATATTGAC+GGG 0.462837 3.1:-79265611 MS.gene38605:CDS
CTTTCAATGTTGGGTATGCA+TGG 0.465046 3.1:-79266164 MS.gene38605:CDS
TGAGGAATTGAACCGGTTTG+TGG 0.466094 3.1:-79266258 MS.gene38605:CDS
CCTGTTGCTAGTACTTTGAT+GGG 0.469144 3.1:-79266221 MS.gene38605:CDS
GTGGTGCGTTTAGGGAAAGT+GGG 0.473107 3.1:+79267091 None:intergenic
TCGTCGTCGGTGGTGGTGGA+AGG 0.473419 3.1:+79266971 None:intergenic
GAGAATGTTCACCTCCAATA+GGG 0.474646 3.1:+79266186 None:intergenic
CAGAAAATGTTGGACACTCC+TGG 0.475840 3.1:-79265324 MS.gene38605:CDS
CTTGGATTTGCTGATGCTTG+CGG 0.477480 3.1:-79265396 MS.gene38605:CDS
CAGAAGTTGAAATTTCCTCT+TGG 0.480563 3.1:-79265861 MS.gene38605:CDS
CCACCACCAACATATAAAAC+AGG 0.484903 3.1:+79266296 None:intergenic
TCCTCCACCCAACCCCGAAA+AGG 0.485931 3.1:-79266926 MS.gene38605:CDS
ATATTGATTCAGCTGAGATT+GGG 0.489098 3.1:-79266016 MS.gene38605:CDS
TTGTTGAGAATGGGAGAGAG+AGG 0.489147 3.1:+79267055 None:intergenic
TTACCCTGGCGGCGCTTCCA+TGG 0.491095 3.1:-79266849 MS.gene38605:CDS
TCCCAGCAATGGTTCATTCA+AGG 0.491125 3.1:-79265247 MS.gene38605:CDS
TACATCAATGAGAACCGGGC+CGG 0.491527 3.1:+79266460 None:intergenic
TATAATGAACGTTCAAGAGT+TGG 0.491642 3.1:-79265577 MS.gene38605:CDS
TGTATCGCCACTTCTGGTCC+CGG 0.495694 3.1:-79266710 MS.gene38605:CDS
CAGCAAATCCAAGCATGTTA+GGG 0.498452 3.1:+79265406 None:intergenic
CAAGTTCCCCGGAGAATGAT+CGG 0.499099 3.1:-79266617 MS.gene38605:CDS
TTTGGAGAGTAAAGGAGTCA+AGG 0.502170 3.1:-79265925 MS.gene38605:CDS
GTGCGAATAGAAAGGAGATC+TGG 0.502437 3.1:+79267114 None:intergenic
ACAATAACATCAAGAAGATA+AGG 0.511351 3.1:+79265300 None:intergenic
AGATCTGGAAGGAGTAGTAG+TGG 0.512532 3.1:+79267129 None:intergenic
TGGCTCGTCGTCGTCGGTGG+TGG 0.513956 3.1:+79266964 None:intergenic
TTTACAAGTATAAGAGACCT+AGG 0.514340 3.1:-79265716 MS.gene38605:CDS
GGTGATGCTATTGTTAGTAC+TGG 0.514392 3.1:-79265771 MS.gene38605:CDS
CATCAATGAGAACCGGGCCG+GGG 0.517234 3.1:+79266462 None:intergenic
CACCAGTTAACTCCACAAAC+CGG 0.519366 3.1:+79266246 None:intergenic
TATAAGAGTAGAGAATCTTC+CGG 0.519396 3.1:-79265550 MS.gene38605:CDS
GATATGAAGGTGGCGTTGGA+AGG 0.519636 3.1:-79265960 MS.gene38605:CDS
CTATTACCGGTCAAGTTCCC+CGG 0.520429 3.1:-79266628 MS.gene38605:CDS
GATACAAACGCCGGGAAGAC+CGG 0.522460 3.1:+79266727 None:intergenic
ACAGCAGCACCAATAGCAGC+AGG 0.523328 3.1:+79265648 None:intergenic
GCAATAGTCGTTGATATTGA+CGG 0.523932 3.1:-79265612 MS.gene38605:CDS
ACTAGGAATCTTAGGTAACC+TGG 0.525532 3.1:+79266367 None:intergenic
GGATGAGCGAGCGTAGCCTT+CGG 0.525610 3.1:+79266748 None:intergenic
AGAAGCCATTCAGAAAATGT+TGG 0.526335 3.1:-79265334 MS.gene38605:CDS
CGGCGTTTCTTGAAAAGCAT+CGG 0.527126 3.1:+79266592 None:intergenic
TGTTCTAACTGCGCCTCACT+AGG 0.528037 3.1:+79266350 None:intergenic
CTGACTAAGTTGGTGGCACC+GGG 0.530079 3.1:+79266692 None:intergenic
GGTGGCACCGGGACCAGAAG+TGG 0.531046 3.1:+79266703 None:intergenic
TCACTGAGGGTGATGGAAGA+AGG 0.531460 3.1:-79265218 MS.gene38605:CDS
ATTCTAGTGAGGAATTGAAC+CGG 0.535594 3.1:-79266265 MS.gene38605:CDS
AAAGCTTCTTTGACAACCCT+AGG 0.536257 3.1:+79266506 None:intergenic
TTAGGTTGTTACCCTATTGG+AGG 0.536424 3.1:-79266197 MS.gene38605:CDS
CTTCTTGGTCACACGAGCAG+CGG 0.539848 3.1:+79265368 None:intergenic
TGCGAGGCCGCTGACTAAGT+TGG 0.540117 3.1:+79266682 None:intergenic
TCGTCGGTGGTGGTGGAAGG+TGG 0.543186 3.1:+79266974 None:intergenic
TGCGGATATGAAGGTGGCGT+TGG 0.543600 3.1:-79265964 MS.gene38605:CDS
GGTGGAGTCTTCGCCGCCGA+AGG 0.545206 3.1:-79266764 MS.gene38605:CDS
CGGGGCGGCCCGAAGTTGCA+AGG 0.550870 3.1:+79266480 None:intergenic
TGATGTTGAAGATATTCCTA+GGG 0.552117 3.1:-79266522 MS.gene38605:CDS
TGTTGAGAATGGGAGAGAGA+GGG 0.553154 3.1:+79267056 None:intergenic
GTCGATTTGTGCGGATATGA+AGG 0.553853 3.1:-79265973 MS.gene38605:CDS
TGGAACGGGTGAGAGCTTGG+TGG 0.554430 3.1:+79266822 None:intergenic
GAGGAGAAACGAGAGATGAA+TGG 0.554571 3.1:+79266944 None:intergenic
GATCTCGTTACTTCAACTAT+CGG 0.558593 3.1:+79266572 None:intergenic
ACCAACGTCTTCGCTTACCC+TGG 0.560240 3.1:-79266863 MS.gene38605:CDS
AGTAGTAGTGGTGGCTGCCA+TGG 0.560243 3.1:+79267141 None:intergenic
TTCTTGGTCACACGAGCAGC+GGG 0.560773 3.1:+79265369 None:intergenic
CAATGAGAACCGGGCCGGGG+CGG 0.561210 3.1:+79266465 None:intergenic
TTAATGGGCTCGGACCAATT+CGG 0.564583 3.1:+79266407 None:intergenic
GAGAGCTTGGTGGATCTCCA+TGG 0.565285 3.1:+79266832 None:intergenic
GAGGCCGCTGACTAAGTTGG+TGG 0.569458 3.1:+79266685 None:intergenic
AGAGAGAGGGAATGTGAGTG+TGG 0.569950 3.1:+79267069 None:intergenic
AAAGTGGGGTGCGAATAGAA+AGG 0.570405 3.1:+79267106 None:intergenic
CCGAGCCCATTAAGCTAACC+GGG 0.571969 3.1:-79266397 MS.gene38605:CDS
GTCGTTGATATTGACGGGGA+TGG 0.574168 3.1:-79265606 MS.gene38605:CDS
GATGAATGGCTCGTCGTCGT+CGG 0.574553 3.1:+79266958 None:intergenic
GGTGGTGGTGGAAGGTGGTG+CGG 0.575939 3.1:+79266979 None:intergenic
TTGTTGAATAATCAACATCT+GGG 0.577937 3.1:-79265516 MS.gene38605:CDS
AGACTCCACCTTGTTCGTGA+CGG 0.580662 3.1:+79266777 None:intergenic
GAATAATCAACATCTGGGTA+TGG 0.582765 3.1:-79265511 MS.gene38605:CDS
GCTATTGTTAGTACTGGTGT+TGG 0.584499 3.1:-79265765 MS.gene38605:CDS
TTCAAGGATGTGATCACTGA+GGG 0.586917 3.1:-79265231 MS.gene38605:CDS
GAATGGCTCGTCGTCGTCGG+TGG 0.588745 3.1:+79266961 None:intergenic
CGCTGCTCGTGTGACCAAGA+AGG 0.589712 3.1:-79265367 MS.gene38605:CDS
TCTCCATGGAAGCGCCGCCA+GGG 0.592923 3.1:+79266846 None:intergenic
AGGCAGTGGTTAACTTCTGG+TGG 0.593875 3.1:-79265696 MS.gene38605:CDS
TGGAGAGTAAAGGAGTCAAG+GGG 0.597182 3.1:-79265923 MS.gene38605:CDS
TTGCCAATGATTCCCAGCAA+TGG 0.598579 3.1:-79265258 MS.gene38605:CDS
TCTTGGTGACCCTTCTAAGG+AGG 0.602410 3.1:-79265439 MS.gene38605:CDS
CCAGAAGTTAACCACTGCCT+AGG 0.604243 3.1:+79265699 None:intergenic
GATTCCGACACGAGAGTGAG+TGG 0.607991 3.1:+79267024 None:intergenic
AGTATAAGAGACCTAGGCAG+TGG 0.611210 3.1:-79265710 MS.gene38605:CDS
AAAACCACTCACTCTCGTGT+CGG 0.612194 3.1:-79267028 MS.gene38605:CDS
TCAAATGTCTTAAAACCAAG+AGG 0.614018 3.1:+79265846 None:intergenic
AAATCTCATCCTCCTTAGAA+GGG 0.616731 3.1:+79265430 None:intergenic
TCCTTGAATGAACCATTGCT+GGG 0.619533 3.1:+79265246 None:intergenic
TGGTTGTTTGAATTCTAGTG+AGG 0.619960 3.1:-79266276 MS.gene38605:CDS
TGAGCGAGCGTAGCCTTCGG+CGG 0.621739 3.1:+79266751 None:intergenic
GGCAATACATGCTCTTGATG+AGG 0.622360 3.1:+79265276 None:intergenic
TAAGGCTTCAACGAGAATGT+CGG 0.623788 3.1:+79266901 None:intergenic
CTCCACCTTGTTCGTGACGG+GGG 0.626976 3.1:+79266780 None:intergenic
TGGGTACATCAATGAGAACC+GGG 0.630749 3.1:+79266456 None:intergenic
TCCACATGTGTCGATTTGTG+CGG 0.632739 3.1:-79265982 MS.gene38605:CDS
ACTCCACCTTGTTCGTGACG+GGG 0.634468 3.1:+79266779 None:intergenic
GACCGGTAATAGCGATGAGA+GGG 0.634896 3.1:+79266639 None:intergenic
ATGGGAGGATAGATTCTACA+AGG 0.638443 3.1:-79265481 MS.gene38605:CDS
GTTACCTAAGATTCCTAGTG+AGG 0.640530 3.1:-79266363 MS.gene38605:CDS
GAGAGGGAATGTGAGTGTGG+TGG 0.641228 3.1:+79267072 None:intergenic
GAAGTGGCGATACAAACGCC+GGG 0.644811 3.1:+79266719 None:intergenic
GGTGCCACCAACTTAGTCAG+CGG 0.645852 3.1:-79266689 MS.gene38605:CDS
GATGTGATCACTGAGGGTGA+TGG 0.648791 3.1:-79265225 MS.gene38605:CDS
AGGTAACCTGGATAAATACC+CGG 0.649250 3.1:+79266379 None:intergenic
GGGTATGGTTGTTCAATGGG+AGG 0.651476 3.1:-79265496 MS.gene38605:CDS
TGACCGGTAATAGCGATGAG+AGG 0.651599 3.1:+79266638 None:intergenic
ACATCAAGAAGATAAGGACC+AGG 0.655550 3.1:+79265306 None:intergenic
TCCGCACAAATCGACACATG+TGG 0.659601 3.1:+79265981 None:intergenic
GTTGAAGCCTTAGAACGCGA+AGG 0.665145 3.1:-79266890 MS.gene38605:CDS
AACGTCTTCGCTTACCCTGG+CGG 0.670998 3.1:-79266860 MS.gene38605:CDS
TCTGGAAGGAGTAGTAGTGG+TGG 0.671721 3.1:+79267132 None:intergenic
TATCAACGACTATTGCATCA+GGG 0.673446 3.1:+79265619 None:intergenic
GAATAGAAAGGAGATCTGGA+AGG 0.682671 3.1:+79267118 None:intergenic
TATCCATCAAAGCGTCTGCG+AGG 0.682987 3.1:+79266666 None:intergenic
GTGCTTGATGAATTGACGAA+TGG 0.687054 3.1:-79265792 MS.gene38605:CDS
TGGTGCGTTTAGGGAAAGTG+GGG 0.694082 3.1:+79267092 None:intergenic
AGAAGTGGCGATACAAACGC+CGG 0.706676 3.1:+79266718 None:intergenic
AGCACCTGAATAGCATACTG+AGG 0.708235 3.1:+79265810 None:intergenic
GATTTGTGCGGATATGAAGG+TGG 0.709634 3.1:-79265970 MS.gene38605:CDS
GTGTTGGACAGCATCAAATG+TGG 0.727126 3.1:-79265749 MS.gene38605:CDS
GCCAGGGTAAGCGAAGACGT+TGG 0.733609 3.1:+79266862 None:intergenic
ATTCAAGGATGTGATCACTG+AGG 0.744694 3.1:-79265232 MS.gene38605:CDS
AATAGTCGTTGATATTGACG+GGG 0.747018 3.1:-79265610 MS.gene38605:CDS
TCGGTTCCGATCATTCTCCG+GGG 0.760009 3.1:+79266611 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAACCTGTTTTATATGT+TGG - chr3.1:79266046-79266065 MS.gene38605:CDS 20.0%
! ACAATAACATCAAGAAGATA+AGG + chr3.1:79267051-79267070 None:intergenic 25.0%
! TTGTTGAATAATCAACATCT+GGG - chr3.1:79266832-79266851 MS.gene38605:CDS 25.0%
AATAGAGCTCATACTTATCT+TGG - chr3.1:79266892-79266911 MS.gene38605:CDS 30.0%
GAACATTCTCTTTCAATGTT+GGG - chr3.1:79266175-79266194 MS.gene38605:CDS 30.0%
GTTGTTGAATAATCAACATC+TGG - chr3.1:79266831-79266850 MS.gene38605:CDS 30.0%
TATAAGAGTAGAGAATCTTC+CGG - chr3.1:79266798-79266817 MS.gene38605:CDS 30.0%
TATAATGAACGTTCAAGAGT+TGG - chr3.1:79266771-79266790 MS.gene38605:CDS 30.0%
TCAAATGTCTTAAAACCAAG+AGG + chr3.1:79266505-79266524 None:intergenic 30.0%
TGAACATTCTCTTTCAATGT+TGG - chr3.1:79266174-79266193 MS.gene38605:CDS 30.0%
TGATGTTGAAGATATTCCTA+GGG - chr3.1:79265826-79265845 MS.gene38605:CDS 30.0%
TTGATGTTGAAGATATTCCT+AGG - chr3.1:79265825-79265844 MS.gene38605:CDS 30.0%
TTTACAAGTATAAGAGACCT+AGG - chr3.1:79266632-79266651 MS.gene38605:CDS 30.0%
! AAACCTGTTTTATATGTTGG+TGG - chr3.1:79266049-79266068 MS.gene38605:CDS 30.0%
! AGTTGTTGTTGAACATCTTT+GGG + chr3.1:79265914-79265933 None:intergenic 30.0%
! GATGTTGATTATTCAACAAC+AGG + chr3.1:79266831-79266850 None:intergenic 30.0%
!! ATATTGATTCAGCTGAGATT+GGG - chr3.1:79266332-79266351 MS.gene38605:CDS 30.0%
!!! AATAGAGTTTTGGAGAGTAA+AGG - chr3.1:79266415-79266434 MS.gene38605:CDS 30.0%
!!! GTTTTTGGTTTGTTGAGAAT+GGG + chr3.1:79265305-79265324 None:intergenic 30.0%
!!! TCTTGGTTTTAAGACATTTG+AGG - chr3.1:79266504-79266523 MS.gene38605:CDS 30.0%
AAAATCTCATCCTCCTTAGA+AGG + chr3.1:79266922-79266941 None:intergenic 35.0%
AAATCTCATCCTCCTTAGAA+GGG + chr3.1:79266921-79266940 None:intergenic 35.0%
AATAGTCGTTGATATTGACG+GGG - chr3.1:79266738-79266757 MS.gene38605:CDS 35.0%
AGAAGCCATTCAGAAAATGT+TGG - chr3.1:79267014-79267033 MS.gene38605:CDS 35.0%
ATATCAACGACTATTGCATC+AGG + chr3.1:79266733-79266752 None:intergenic 35.0%
ATTCTAGTGAGGAATTGAAC+CGG - chr3.1:79266083-79266102 MS.gene38605:CDS 35.0%
CAATAGTCGTTGATATTGAC+GGG - chr3.1:79266737-79266756 MS.gene38605:CDS 35.0%
CAGAAGTTGAAATTTCCTCT+TGG - chr3.1:79266487-79266506 MS.gene38605:CDS 35.0%
GAATAATCAACATCTGGGTA+TGG - chr3.1:79266837-79266856 MS.gene38605:CDS 35.0%
GATCTCGTTACTTCAACTAT+CGG + chr3.1:79265779-79265798 None:intergenic 35.0%
GCAATAGTCGTTGATATTGA+CGG - chr3.1:79266736-79266755 MS.gene38605:CDS 35.0%
TATCAACGACTATTGCATCA+GGG + chr3.1:79266732-79266751 None:intergenic 35.0%
TGGTTGTTTGAATTCTAGTG+AGG - chr3.1:79266072-79266091 MS.gene38605:CDS 35.0%
TTCAACAACAGGATCTTAAC+CGG + chr3.1:79266820-79266839 None:intergenic 35.0%
! AGGTTTGATGATAGAGTTAC+TGG - chr3.1:79266265-79266284 MS.gene38605:CDS 35.0%
! AGTGTCCAACATTTTCTGAA+TGG + chr3.1:79267022-79267041 None:intergenic 35.0%
! AGTTAGAAGCTTTTGCTAGT+AGG - chr3.1:79266290-79266309 MS.gene38605:CDS 35.0%
! GAGTTGTTGTTGAACATCTT+TGG + chr3.1:79265915-79265934 None:intergenic 35.0%
! GGAAGGTCTTAATAGAGTTT+TGG - chr3.1:79266405-79266424 MS.gene38605:CDS 35.0%
! GTTAGAAGCTTTTGCTAGTA+GGG - chr3.1:79266291-79266310 MS.gene38605:CDS 35.0%
! TTCTCTAAGCTTTTCCTTCT+TGG + chr3.1:79266998-79267017 None:intergenic 35.0%
!! AAATACCCGGTTAGCTTAAT+GGG + chr3.1:79265959-79265978 None:intergenic 35.0%
!! GATATTGATTCAGCTGAGAT+TGG - chr3.1:79266331-79266350 MS.gene38605:CDS 35.0%
!! TAAATACCCGGTTAGCTTAA+TGG + chr3.1:79265960-79265979 None:intergenic 35.0%
!!! AGCTTTTTTCCTTGCAACTT+CGG - chr3.1:79265859-79265878 MS.gene38605:CDS 35.0%
!!! GGTTTTTGGTTTGTTGAGAA+TGG + chr3.1:79265306-79265325 None:intergenic 35.0%
AAAGCTTCTTTGACAACCCT+AGG + chr3.1:79265845-79265864 None:intergenic 40.0%
ACATCAAGAAGATAAGGACC+AGG + chr3.1:79267045-79267064 None:intergenic 40.0%
ACTAGGAATCTTAGGTAACC+TGG + chr3.1:79265984-79266003 None:intergenic 40.0%
AGAGAATGTTCACCTCCAAT+AGG + chr3.1:79266166-79266185 None:intergenic 40.0%
AGGTAACCTGGATAAATACC+CGG + chr3.1:79265972-79265991 None:intergenic 40.0%
ATCCTTGAATGAACCATTGC+TGG + chr3.1:79267106-79267125 None:intergenic 40.0%
ATCTGGGTATGGTTGTTCAA+TGG - chr3.1:79266848-79266867 MS.gene38605:CDS 40.0%
ATGGGAGGATAGATTCTACA+AGG - chr3.1:79266867-79266886 MS.gene38605:CDS 40.0%
ATTCAAGGATGTGATCACTG+AGG - chr3.1:79267116-79267135 MS.gene38605:CDS 40.0%
CAGCAAATCCAAGCATGTTA+GGG + chr3.1:79266945-79266964 None:intergenic 40.0%
CCACCACCAACATATAAAAC+AGG + chr3.1:79266055-79266074 None:intergenic 40.0%
CCTGTTGCTAGTACTTTGAT+GGG - chr3.1:79266127-79266146 MS.gene38605:CDS 40.0%
CTTTCAATGTTGGGTATGCA+TGG - chr3.1:79266184-79266203 MS.gene38605:CDS 40.0%
GAATAGAAAGGAGATCTGGA+AGG + chr3.1:79265233-79265252 None:intergenic 40.0%
GAGAATGTTCACCTCCAATA+GGG + chr3.1:79266165-79266184 None:intergenic 40.0%
GCTAGTACTTTGATGGGATT+AGG - chr3.1:79266133-79266152 MS.gene38605:CDS 40.0%
GGTGATGCTATTGTTAGTAC+TGG - chr3.1:79266577-79266596 MS.gene38605:CDS 40.0%
GTGCTTGATGAATTGACGAA+TGG - chr3.1:79266556-79266575 MS.gene38605:CDS 40.0%
GTTACCTAAGATTCCTAGTG+AGG - chr3.1:79265985-79266004 MS.gene38605:CDS 40.0%
TAAGGCTTCAACGAGAATGT+CGG + chr3.1:79265450-79265469 None:intergenic 40.0%
TCAGCAAATCCAAGCATGTT+AGG + chr3.1:79266946-79266965 None:intergenic 40.0%
TCCTGTTGCTAGTACTTTGA+TGG - chr3.1:79266126-79266145 MS.gene38605:CDS 40.0%
TCCTTGAATGAACCATTGCT+GGG + chr3.1:79267105-79267124 None:intergenic 40.0%
TCTGGGTATGGTTGTTCAAT+GGG - chr3.1:79266849-79266868 MS.gene38605:CDS 40.0%
TTCAAGGATGTGATCACTGA+GGG - chr3.1:79267117-79267136 MS.gene38605:CDS 40.0%
TTGGAGAGTAAAGGAGTCAA+GGG - chr3.1:79266424-79266443 MS.gene38605:CDS 40.0%
TTGGGTACATCAATGAGAAC+CGG + chr3.1:79265896-79265915 None:intergenic 40.0%
TTTGGAGAGTAAAGGAGTCA+AGG - chr3.1:79266423-79266442 MS.gene38605:CDS 40.0%
TTTGGATTACCTGCTGCTAT+TGG - chr3.1:79266691-79266710 MS.gene38605:CDS 40.0%
! CAAGGGGAAACTTGATTTTG+AGG - chr3.1:79266441-79266460 MS.gene38605:CDS 40.0%
! GAGAATGTTACGGATGGTTT+TGG + chr3.1:79265549-79265568 None:intergenic 40.0%
! GAGATTTTCCCTAACATGCT+TGG - chr3.1:79266934-79266953 MS.gene38605:CDS 40.0%
! GGATTAGGTTGTTACCCTAT+TGG - chr3.1:79266148-79266167 MS.gene38605:CDS 40.0%
! TTAGGTTGTTACCCTATTGG+AGG - chr3.1:79266151-79266170 MS.gene38605:CDS 40.0%
! TTATCTTGGTGACCCTTCTA+AGG - chr3.1:79266906-79266925 MS.gene38605:CDS 40.0%
!! AGTGATCTGTTGCTTGCTTT+TGG - chr3.1:79266238-79266257 MS.gene38605:CDS 40.0%
!! CCTGTTTTATATGTTGGTGG+TGG - chr3.1:79266052-79266071 MS.gene38605:CDS 40.0%
!! GCTATTGTTAGTACTGGTGT+TGG - chr3.1:79266583-79266602 MS.gene38605:CDS 40.0%
!! GTGATCTGTTGCTTGCTTTT+GGG - chr3.1:79266239-79266258 MS.gene38605:CDS 40.0%
!! TGATCTGTTGCTTGCTTTTG+GGG - chr3.1:79266240-79266259 MS.gene38605:CDS 40.0%
!!! AACTTGATTTTGAGGCATGG+AGG - chr3.1:79266449-79266468 MS.gene38605:CDS 40.0%
!!! GCTTTTTTCCTTGCAACTTC+GGG - chr3.1:79265860-79265879 MS.gene38605:CDS 40.0%
!!! GGAAACTTGATTTTGAGGCA+TGG - chr3.1:79266446-79266465 MS.gene38605:CDS 40.0%
!!! TGTTACGGATGGTTTTGGAA+CGG + chr3.1:79265544-79265563 None:intergenic 40.0%
AAAACCACTCACTCTCGTGT+CGG - chr3.1:79265320-79265339 MS.gene38605:CDS 45.0%
AAAGTGGGGTGCGAATAGAA+AGG + chr3.1:79265245-79265264 None:intergenic 45.0%
AACAACTCGCTGTTCCGAAT+TGG - chr3.1:79265927-79265946 MS.gene38605:CDS 45.0%
AGATCTGGAAGGAGTAGTAG+TGG + chr3.1:79265222-79265241 None:intergenic 45.0%
AGCACCTGAATAGCATACTG+AGG + chr3.1:79266541-79266560 None:intergenic 45.0%
AGCTAACCGGGTATTTATCC+AGG - chr3.1:79265963-79265982 MS.gene38605:CDS 45.0%
AGTATAAGAGACCTAGGCAG+TGG - chr3.1:79266638-79266657 MS.gene38605:CDS 45.0%
CACCAGTTAACTCCACAAAC+CGG + chr3.1:79266105-79266124 None:intergenic 45.0%
CAGAAAATGTTGGACACTCC+TGG - chr3.1:79267024-79267043 MS.gene38605:CDS 45.0%
GAACCATTGCTGGGAATCAT+TGG + chr3.1:79267096-79267115 None:intergenic 45.0%
GAGGAGAAACGAGAGATGAA+TGG + chr3.1:79265407-79265426 None:intergenic 45.0%
GATTTGTGCGGATATGAAGG+TGG - chr3.1:79266378-79266397 MS.gene38605:CDS 45.0%
GGCAATACATGCTCTTGATG+AGG + chr3.1:79267075-79267094 None:intergenic 45.0%
GTGCGAATAGAAAGGAGATC+TGG + chr3.1:79265237-79265256 None:intergenic 45.0%
GTGTTGGACAGCATCAAATG+TGG - chr3.1:79266599-79266618 MS.gene38605:CDS 45.0%
TCCCAGCAATGGTTCATTCA+AGG - chr3.1:79267101-79267120 MS.gene38605:CDS 45.0%
TGGAGAGTAAAGGAGTCAAG+GGG - chr3.1:79266425-79266444 MS.gene38605:CDS 45.0%
TGGGTACATCAATGAGAACC+GGG + chr3.1:79265895-79265914 None:intergenic 45.0%
TGTTGAGAATGGGAGAGAGA+GGG + chr3.1:79265295-79265314 None:intergenic 45.0%
TTCGCCTCAGTATGCTATTC+AGG - chr3.1:79266534-79266553 MS.gene38605:CDS 45.0%
TTGCCAATGATTCCCAGCAA+TGG - chr3.1:79267090-79267109 MS.gene38605:CDS 45.0%
TTGTTGAGAATGGGAGAGAG+AGG + chr3.1:79265296-79265315 None:intergenic 45.0%
! ACACGAGAGTGAGTGGTTTT+TGG + chr3.1:79265320-79265339 None:intergenic 45.0%
! CCCATCAAAGTACTAGCAAC+AGG + chr3.1:79266130-79266149 None:intergenic 45.0%
! CGCAGTTAGAACAGGTTTTG+AGG - chr3.1:79266008-79266027 MS.gene38605:CDS 45.0%
! CGGCGTTTCTTGAAAAGCAT+CGG + chr3.1:79265759-79265778 None:intergenic 45.0%
!! AACCGGTTTGTGGAGTTAAC+TGG - chr3.1:79266100-79266119 MS.gene38605:CDS 45.0%
!! CTTGGATTTGCTGATGCTTG+CGG - chr3.1:79266952-79266971 MS.gene38605:CDS 45.0%
!! GTCGATTTGTGCGGATATGA+AGG - chr3.1:79266375-79266394 MS.gene38605:CDS 45.0%
!! TCCACATGTGTCGATTTGTG+CGG - chr3.1:79266366-79266385 MS.gene38605:CDS 45.0%
!! TGAGGAATTGAACCGGTTTG+TGG - chr3.1:79266090-79266109 MS.gene38605:CDS 45.0%
!! TGGTTAACTTCTGGTGGACT+TGG - chr3.1:79266658-79266677 MS.gene38605:CDS 45.0%
!! TTAATGGGCTCGGACCAATT+CGG + chr3.1:79265944-79265963 None:intergenic 45.0%
!!! GTTACGGATGGTTTTGGAAC+GGG + chr3.1:79265543-79265562 None:intergenic 45.0%
!!! TGTTGCTTGCTTTTGGGGTT+AGG - chr3.1:79266245-79266264 MS.gene38605:CDS 45.0%
AGAAGTGGCGATACAAACGC+CGG + chr3.1:79265633-79265652 None:intergenic 50.0%
AGACTCCACCTTGTTCGTGA+CGG + chr3.1:79265574-79265593 None:intergenic 50.0%
AGAGAGAGGGAATGTGAGTG+TGG + chr3.1:79265282-79265301 None:intergenic 50.0%
AGGCAGTGGTTAACTTCTGG+TGG - chr3.1:79266652-79266671 MS.gene38605:CDS 50.0%
CAAGTTCCCCGGAGAATGAT+CGG - chr3.1:79265731-79265750 MS.gene38605:CDS 50.0%
CCAGAAGTTAACCACTGCCT+AGG + chr3.1:79266652-79266671 None:intergenic 50.0%
CCTAGGCAGTGGTTAACTTC+TGG - chr3.1:79266649-79266668 MS.gene38605:CDS 50.0%
CTATTACCGGTCAAGTTCCC+CGG - chr3.1:79265720-79265739 MS.gene38605:CDS 50.0%
GACCGGTAATAGCGATGAGA+GGG + chr3.1:79265712-79265731 None:intergenic 50.0%
GATGTGATCACTGAGGGTGA+TGG - chr3.1:79267123-79267142 MS.gene38605:CDS 50.0%
GGGTATGGTTGTTCAATGGG+AGG - chr3.1:79266852-79266871 MS.gene38605:CDS 50.0%
GTCCCTCTCATCGCTATTAC+CGG - chr3.1:79265707-79265726 MS.gene38605:CDS 50.0%
GTCGTTGATATTGACGGGGA+TGG - chr3.1:79266742-79266761 MS.gene38605:CDS 50.0%
GTGGTGCGTTTAGGGAAAGT+GGG + chr3.1:79265260-79265279 None:intergenic 50.0%
GTTGAAGCCTTAGAACGCGA+AGG - chr3.1:79265458-79265477 MS.gene38605:CDS 50.0%
TACATCAATGAGAACCGGGC+CGG + chr3.1:79265891-79265910 None:intergenic 50.0%
TAGTGAGGCGCAGTTAGAAC+AGG - chr3.1:79266000-79266019 MS.gene38605:CDS 50.0%
TCCGAGCCCATTAAGCTAAC+CGG - chr3.1:79265950-79265969 MS.gene38605:CDS 50.0%
TCCGCACAAATCGACACATG+TGG + chr3.1:79266370-79266389 None:intergenic 50.0%
TCTGGAAGGAGTAGTAGTGG+TGG + chr3.1:79265219-79265238 None:intergenic 50.0%
TGACCGGTAATAGCGATGAG+AGG + chr3.1:79265713-79265732 None:intergenic 50.0%
TGCGCCTCACTAGGAATCTT+AGG + chr3.1:79265992-79266011 None:intergenic 50.0%
TGGTGCGTTTAGGGAAAGTG+GGG + chr3.1:79265259-79265278 None:intergenic 50.0%
TGTTCTAACTGCGCCTCACT+AGG + chr3.1:79266001-79266020 None:intergenic 50.0%
! AGAATGTCGGAGCCTTTTCG+GGG + chr3.1:79265437-79265456 None:intergenic 50.0%
! ATCGGTTCCGATCATTCTCC+GGG + chr3.1:79265741-79265760 None:intergenic 50.0%
! CGAGAATGTCGGAGCCTTTT+CGG + chr3.1:79265439-79265458 None:intergenic 50.0%
! GAGAATGTCGGAGCCTTTTC+GGG + chr3.1:79265438-79265457 None:intergenic 50.0%
! GATATGAAGGTGGCGTTGGA+AGG - chr3.1:79266388-79266407 MS.gene38605:CDS 50.0%
! TATCCATCAAAGCGTCTGCG+AGG + chr3.1:79265685-79265704 None:intergenic 50.0%
! TCTTGGTGACCCTTCTAAGG+AGG - chr3.1:79266909-79266928 MS.gene38605:CDS 50.0%
! TGAGTGTGGTGGTGCGTTTA+GGG + chr3.1:79265268-79265287 None:intergenic 50.0%
!! CATCGGTTCCGATCATTCTC+CGG + chr3.1:79265742-79265761 None:intergenic 50.0%
!! TCACTGAGGGTGATGGAAGA+AGG - chr3.1:79267130-79267149 MS.gene38605:CDS 50.0%
!! TCTGGTGGACTTGGTGCTAT+GGG - chr3.1:79266667-79266686 MS.gene38605:CDS 50.0%
!! TTCTGGTGGACTTGGTGCTA+TGG - chr3.1:79266666-79266685 MS.gene38605:CDS 50.0%
!!! GGACTTGGTGCTATGGGTTT+TGG - chr3.1:79266673-79266692 MS.gene38605:CDS 50.0%
!!! TGATTTTGAGGCATGGAGGC+AGG - chr3.1:79266453-79266472 MS.gene38605:CDS 50.0%
!!! TTTTGGAACGGGTGAGAGCT+TGG + chr3.1:79265532-79265551 None:intergenic 50.0%
AACGTCTTCGCTTACCCTGG+CGG - chr3.1:79265488-79265507 MS.gene38605:CDS 55.0%
ACAGCAGCACCAATAGCAGC+AGG + chr3.1:79266703-79266722 None:intergenic 55.0%
ACATCAATGAGAACCGGGCC+GGG + chr3.1:79265890-79265909 None:intergenic 55.0%
ACCAACGTCTTCGCTTACCC+TGG - chr3.1:79265485-79265504 MS.gene38605:CDS 55.0%
ACGGGGGAGAATGTTACGGA+TGG + chr3.1:79265555-79265574 None:intergenic 55.0%
ACTCCACCTTGTTCGTGACG+GGG + chr3.1:79265572-79265591 None:intergenic 55.0%
ATTCTCCCCCGTCACGAACA+AGG - chr3.1:79265563-79265582 MS.gene38605:CDS 55.0%
CATTCTCCGGGGAACTTGAC+CGG + chr3.1:79265729-79265748 None:intergenic 55.0%
CCGAGCCCATTAAGCTAACC+GGG - chr3.1:79265951-79265970 MS.gene38605:CDS 55.0%
CTTCTTGGTCACACGAGCAG+CGG + chr3.1:79266983-79267002 None:intergenic 55.0%
GAAGTGGCGATACAAACGCC+GGG + chr3.1:79265632-79265651 None:intergenic 55.0%
GACTCCACCTTGTTCGTGAC+GGG + chr3.1:79265573-79265592 None:intergenic 55.0%
GAGAGGGAATGTGAGTGTGG+TGG + chr3.1:79265279-79265298 None:intergenic 55.0%
GATACAAACGCCGGGAAGAC+CGG + chr3.1:79265624-79265643 None:intergenic 55.0%
GATGAATGGCTCGTCGTCGT+CGG + chr3.1:79265393-79265412 None:intergenic 55.0%
GATTCCGACACGAGAGTGAG+TGG + chr3.1:79265327-79265346 None:intergenic 55.0%
GGCGTTTGTATCGCCACTTC+TGG - chr3.1:79265632-79265651 MS.gene38605:CDS 55.0%
GGTAACGCCTTCGCGTTCTA+AGG + chr3.1:79265468-79265487 None:intergenic 55.0%
GGTGGTGCGTTTAGGGAAAG+TGG + chr3.1:79265261-79265280 None:intergenic 55.0%
TCGGTTCCGATCATTCTCCG+GGG + chr3.1:79265740-79265759 None:intergenic 55.0%
TGCGGATATGAAGGTGGCGT+TGG - chr3.1:79266384-79266403 MS.gene38605:CDS 55.0%
TGTATCGCCACTTCTGGTCC+CGG - chr3.1:79265638-79265657 MS.gene38605:CDS 55.0%
TTCTTGGTCACACGAGCAGC+GGG + chr3.1:79266982-79267001 None:intergenic 55.0%
! CGTGACGGGGGAGAATGTTA+CGG + chr3.1:79265559-79265578 None:intergenic 55.0%
! GAGAGCTTGGTGGATCTCCA+TGG + chr3.1:79265519-79265538 None:intergenic 55.0%
! GGTGCCACCAACTTAGTCAG+CGG - chr3.1:79265659-79265678 MS.gene38605:CDS 55.0%
! GTGAGTGTGGTGGTGCGTTT+AGG + chr3.1:79265269-79265288 None:intergenic 55.0%
!! CCCGGTTAGCTTAATGGGCT+CGG + chr3.1:79265954-79265973 None:intergenic 55.0%
!! CTGACTAAGTTGGTGGCACC+GGG + chr3.1:79265659-79265678 None:intergenic 55.0%
!! GCTGACTAAGTTGGTGGCAC+CGG + chr3.1:79265660-79265679 None:intergenic 55.0%
CATCAATGAGAACCGGGCCG+GGG + chr3.1:79265889-79265908 None:intergenic 60.0%
CGCTGCTCGTGTGACCAAGA+AGG - chr3.1:79266981-79267000 MS.gene38605:CDS 60.0%
CTCCACCTTGTTCGTGACGG+GGG + chr3.1:79265571-79265590 None:intergenic 60.0%
GAAGGCTACGCTCGCTCATC+CGG - chr3.1:79265602-79265621 MS.gene38605:CDS 60.0%
GCCAGGGTAAGCGAAGACGT+TGG + chr3.1:79265489-79265508 None:intergenic 60.0%
GGATGAGCGAGCGTAGCCTT+CGG + chr3.1:79265603-79265622 None:intergenic 60.0%
TCCTCCACCCAACCCCGAAA+AGG - chr3.1:79265422-79265441 MS.gene38605:CDS 60.0%
TGGAACGGGTGAGAGCTTGG+TGG + chr3.1:79265529-79265548 None:intergenic 60.0%
TGGTGCGGTGGAGGGTTTGA+GGG + chr3.1:79265357-79265376 None:intergenic 60.0%
! GAGGCCGCTGACTAAGTTGG+TGG + chr3.1:79265666-79265685 None:intergenic 60.0%
! TGCGAGGCCGCTGACTAAGT+TGG + chr3.1:79265669-79265688 None:intergenic 60.0%
!! GTCGGAGCCTTTTCGGGGTT+GGG + chr3.1:79265432-79265451 None:intergenic 60.0%
!! TGTCGGAGCCTTTTCGGGGT+TGG + chr3.1:79265433-79265452 None:intergenic 60.0%
CGGCCTCGCAGACGCTTTGA+TGG - chr3.1:79265679-79265698 MS.gene38605:CDS 65.0%
CTCCCCCGTCACGAACAAGG+TGG - chr3.1:79265566-79265585 MS.gene38605:CDS 65.0%
GAATGGCTCGTCGTCGTCGG+TGG + chr3.1:79265390-79265409 None:intergenic 65.0%
GCTCGCTCATCCGGTCTTCC+CGG - chr3.1:79265611-79265630 MS.gene38605:CDS 65.0%
GTGGAAGGTGGTGCGGTGGA+GGG + chr3.1:79265365-79265384 None:intergenic 65.0%
GTGGTGCGGTGGAGGGTTTG+AGG + chr3.1:79265358-79265377 None:intergenic 65.0%
TGAGCGAGCGTAGCCTTCGG+CGG + chr3.1:79265600-79265619 None:intergenic 65.0%
TTACCCTGGCGGCGCTTCCA+TGG - chr3.1:79265499-79265518 MS.gene38605:CDS 65.0%
!! ATCTCCATGGAAGCGCCGCC+AGG + chr3.1:79265506-79265525 None:intergenic 65.0%
!! GCCTTTTCGGGGTTGGGTGG+AGG + chr3.1:79265426-79265445 None:intergenic 65.0%
!! GGAGCCTTTTCGGGGTTGGG+TGG + chr3.1:79265429-79265448 None:intergenic 65.0%
!! GGTGGTGGTGGAAGGTGGTG+CGG + chr3.1:79265372-79265391 None:intergenic 65.0%
!! TCGTCGGTGGTGGTGGAAGG+TGG + chr3.1:79265377-79265396 None:intergenic 65.0%
!! TCGTCGTCGGTGGTGGTGGA+AGG + chr3.1:79265380-79265399 None:intergenic 65.0%
!! TCTCCATGGAAGCGCCGCCA+GGG + chr3.1:79265505-79265524 None:intergenic 65.0%
CAATGAGAACCGGGCCGGGG+CGG + chr3.1:79265886-79265905 None:intergenic 70.0%
CTTGCAACTTCGGGCCGCCC+CGG - chr3.1:79265869-79265888 MS.gene38605:CDS 70.0%
GGTGGAAGGTGGTGCGGTGG+AGG + chr3.1:79265366-79265385 None:intergenic 70.0%
GGTGGAGTCTTCGCCGCCGA+AGG - chr3.1:79265584-79265603 MS.gene38605:CDS 70.0%
TGGCTCGTCGTCGTCGGTGG+TGG + chr3.1:79265387-79265406 None:intergenic 70.0%
! CTCGTCGTCGTCGGTGGTGG+TGG + chr3.1:79265384-79265403 None:intergenic 70.0%
! GGTGGCACCGGGACCAGAAG+TGG + chr3.1:79265648-79265667 None:intergenic 70.0%
!! GGTGGTGGAAGGTGGTGCGG+TGG + chr3.1:79265369-79265388 None:intergenic 70.0%
CGGGGCGGCCCGAAGTTGCA+AGG + chr3.1:79265871-79265890 None:intergenic 75.0%
! AACTTCGGGCCGCCCCGGCC+CGG - chr3.1:79265874-79265893 MS.gene38605:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 79265209 79267161 79265209 ID=MS.gene38605
chr3.1 mRNA 79265209 79267161 79265209 ID=MS.gene38605.t1;Parent=MS.gene38605
chr3.1 exon 79265209 79267161 79265209 ID=MS.gene38605.t1.exon1;Parent=MS.gene38605.t1
chr3.1 CDS 79265209 79267161 79265209 ID=cds.MS.gene38605.t1;Parent=MS.gene38605.t1
Gene Sequence

>MS.gene38605

ATGGCAGCCACCACTACTACTCCTTCCAGATCTCCTTTCTATTCGCACCCCACTTTCCCTAAACGCACCACCACACTCACATTCCCTCTCTCTCCCATTCTCAACAAACCAAAAACCACTCACTCTCGTGTCGGAATCTCATGCTCCCTCAAACCCTCCACCGCACCACCTTCCACCACCACCGACGACGACGAGCCATTCATCTCTCGTTTCTCCTCCACCCAACCCCGAAAAGGCTCCGACATTCTCGTTGAAGCCTTAGAACGCGAAGGCGTTACCAACGTCTTCGCTTACCCTGGCGGCGCTTCCATGGAGATCCACCAAGCTCTCACCCGTTCCAAAACCATCCGTAACATTCTCCCCCGTCACGAACAAGGTGGAGTCTTCGCCGCCGAAGGCTACGCTCGCTCATCCGGTCTTCCCGGCGTTTGTATCGCCACTTCTGGTCCCGGTGCCACCAACTTAGTCAGCGGCCTCGCAGACGCTTTGATGGATAGTGTCCCTCTCATCGCTATTACCGGTCAAGTTCCCCGGAGAATGATCGGAACCGATGCTTTTCAAGAAACGCCGATAGTTGAAGTAACGAGATCTATCACAAAGCATAACTATCTCATTCTTGATGTTGAAGATATTCCTAGGGTTGTCAAAGAAGCTTTTTTCCTTGCAACTTCGGGCCGCCCCGGCCCGGTTCTCATTGATGTACCCAAAGATGTTCAACAACAACTCGCTGTTCCGAATTGGTCCGAGCCCATTAAGCTAACCGGGTATTTATCCAGGTTACCTAAGATTCCTAGTGAGGCGCAGTTAGAACAGGTTTTGAGGTTGTTGTTTGAATCTAAAAAACCTGTTTTATATGTTGGTGGTGGTTGTTTGAATTCTAGTGAGGAATTGAACCGGTTTGTGGAGTTAACTGGTGTTCCTGTTGCTAGTACTTTGATGGGATTAGGTTGTTACCCTATTGGAGGTGAACATTCTCTTTCAATGTTGGGTATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAATAGTGATCTGTTGCTTGCTTTTGGGGTTAGGTTTGATGATAGAGTTACTGGAAAGTTAGAAGCTTTTGCTAGTAGGGCTAAGATTGTTCATATAGATATTGATTCAGCTGAGATTGGGAAGAATAAGATTCCACATGTGTCGATTTGTGCGGATATGAAGGTGGCGTTGGAAGGTCTTAATAGAGTTTTGGAGAGTAAAGGAGTCAAGGGGAAACTTGATTTTGAGGCATGGAGGCAGGAGTTGAATGTGCAGAAGTTGAAATTTCCTCTTGGTTTTAAGACATTTGAGGATGCAATTTCGCCTCAGTATGCTATTCAGGTGCTTGATGAATTGACGAATGGTGATGCTATTGTTAGTACTGGTGTTGGACAGCATCAAATGTGGTCTGCTCAGTTTTACAAGTATAAGAGACCTAGGCAGTGGTTAACTTCTGGTGGACTTGGTGCTATGGGTTTTGGATTACCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCAATAGTCGTTGATATTGACGGGGATGGTAGTTTTATAATGAACGTTCAAGAGTTGGCGACTATAAGAGTAGAGAATCTTCCGGTTAAGATCCTGTTGTTGAATAATCAACATCTGGGTATGGTTGTTCAATGGGAGGATAGATTCTACAAGGCAAATAGAGCTCATACTTATCTTGGTGACCCTTCTAAGGAGGATGAGATTTTCCCTAACATGCTTGGATTTGCTGATGCTTGCGGAATACCCGCTGCTCGTGTGACCAAGAAGGAAAAGCTTAGAGAAGCCATTCAGAAAATGTTGGACACTCCTGGTCCTTATCTTCTTGATGTTATTGTACCTCATCAAGAGCATGTATTGCCAATGATTCCCAGCAATGGTTCATTCAAGGATGTGATCACTGAGGGTGATGGAAGAAGGAGTTATTGA
Protein sequence

>MS.gene38605.t1

MAATTTTPSRSPFYSHPTFPKRTTTLTFPLSPILNKPKTTHSRVGISCSLKPSTAPPSTTTDDDEPFISRFSSTQPRKGSDILVEALEREGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVEDIPRVVKEAFFLATSGRPGPVLIDVPKDVQQQLAVPNWSEPIKLTGYLSRLPKIPSEAQLEQVLRLLFESKKPVLYVGGGCLNSSEELNRFVELTGVPVASTLMGLGCYPIGGEHSLSMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADMKVALEGLNRVLESKGVKGKLDFEAWRQELNVQKLKFPLGFKTFEDAISPQYAIQVLDELTNGDAIVSTGVGQHQMWSAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSKEDEIFPNMLGFADACGIPAARVTKKEKLREAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRRSY