AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055556

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055556.t1 MTR_1g082660 98.828 256 2 1 1 255 1 256 0.0 518
MS.gene055556.t1 MTR_7g113680 81.154 260 44 2 1 255 52 311 8.81e-145 407
MS.gene055556.t1 MTR_3g099180 82.524 103 18 0 83 185 37 139 2.32e-58 185
MS.gene055556.t1 MTR_3g099180 82.524 103 18 0 83 185 37 139 2.34e-58 185
MS.gene055556.t1 MTR_2g023340 50.000 184 70 7 82 254 66 238 2.89e-53 172
MS.gene055556.t1 MTR_2g081600 59.341 91 36 1 100 189 21 111 1.05e-32 116
MS.gene055556.t1 MTR_2g081630 63.855 83 29 1 100 181 21 103 4.21e-32 114
MS.gene055556.t1 MTR_3g012030 39.744 78 47 0 102 179 9 86 5.52e-12 64.7
MS.gene055556.t1 MTR_8g041420 37.179 78 49 0 102 179 9 86 1.40e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055556.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene055556.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene055556.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene055556.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene055556.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene055556.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene055556.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene055556.t1 AT1G56170 67.785 149 34 3 80 226 55 191 1.70e-66 205
MS.gene055556.t1 AT1G56170 67.785 149 34 3 80 226 55 191 1.70e-66 205
MS.gene055556.t1 AT3G48590 69.863 146 41 3 83 228 47 189 3.01e-64 201
MS.gene055556.t1 AT5G63470 68.456 149 41 3 83 228 60 205 1.65e-61 194
MS.gene055556.t1 AT5G63470 68.456 149 41 3 83 228 60 205 1.65e-61 194
MS.gene055556.t1 AT5G50480 48.276 174 55 7 79 243 35 182 6.17e-44 147
MS.gene055556.t1 AT5G27910 47.794 136 61 3 78 206 16 148 1.11e-35 125
MS.gene055556.t1 AT5G50490 39.106 179 90 6 71 244 9 173 3.02e-32 117
MS.gene055556.t1 AT5G50470 48.148 108 47 2 79 180 44 148 1.17e-28 108
MS.gene055556.t1 AT5G38140 45.000 100 51 2 80 178 48 144 5.00e-26 101

Find 88 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGATATCTTTGATTTCT+TGG 0.152930 1.2:-60238751 MS.gene055556:CDS
CTACCAACAACACCCATATT+TGG 0.174332 1.2:+60239221 None:intergenic
TGGAGTTAACCTTGCGTTCT+TGG 0.214555 1.2:-60238839 MS.gene055556:CDS
TCATGGCCAAAACCCAAATA+TGG 0.254115 1.2:-60239234 MS.gene055556:CDS
AACAACAACTCCAGACCTTT+TGG 0.267438 1.2:-60239019 MS.gene055556:CDS
CAACACCCATATTTGGGTTT+TGG 0.289322 1.2:+60239228 None:intergenic
GTCATTGGGTTTGGCTGGTA+TGG 0.344732 1.2:+60239170 None:intergenic
TACCAACAACACCCATATTT+GGG 0.353196 1.2:+60239222 None:intergenic
ATTGTTGTTGCTCCGGTGGT+TGG 0.362576 1.2:+60238520 None:intergenic
TTGTTGTTGCTCCGGTGGTT+GGG 0.366842 1.2:+60238521 None:intergenic
GGTGACCCAGTCATTGGGTT+TGG 0.375542 1.2:+60239161 None:intergenic
GGGATGGTTGTTCCCTCTGT+TGG 0.377579 1.2:-60239137 MS.gene055556:CDS
GCACAGCAAGCTGGAAATCC+TGG 0.386872 1.2:-60238612 MS.gene055556:CDS
GGATGGTTGTTCCCTCTGTT+GGG 0.395560 1.2:-60239136 MS.gene055556:CDS
ATCCCAGGTGACCCAGTCAT+TGG 0.407383 1.2:+60239155 None:intergenic
TGAGGCGGCATATAGCAATA+AGG 0.408347 1.2:+60238639 None:intergenic
ACCCAGTCATTGGGTTTGGC+TGG 0.417557 1.2:+60239165 None:intergenic
AACCCAATGACTGGGTCACC+TGG 0.422707 1.2:-60239158 MS.gene055556:CDS
GGTGGTTGGGGCCACATTTG+AGG 0.430701 1.2:+60238534 None:intergenic
CACGCCCTTGCAAATACAAC+CGG 0.432250 1.2:+60238876 None:intergenic
CTTGGTTGACATTGTGCCTA+GGG 0.441263 1.2:-60238733 MS.gene055556:CDS
AACCCAAATATGGGTGTTGT+TGG 0.445950 1.2:-60239224 MS.gene055556:CDS
ACTGATTTCCCCAAAAGGTC+TGG 0.448617 1.2:+60239009 None:intergenic
TCCCAGGTGACCCAGTCATT+GGG 0.450412 1.2:+60239156 None:intergenic
CACATTTGAGGTGCCATGTA+TGG 0.456179 1.2:+60238546 None:intergenic
TCAAATGTGGCCCCAACCAC+CGG 0.464006 1.2:-60238532 MS.gene055556:CDS
AGGCGCCGGTTGTATTTGCA+AGG 0.466746 1.2:-60238881 MS.gene055556:CDS
TGTTGTTGGTAGTGGACAAA+TGG 0.476420 1.2:-60239210 MS.gene055556:CDS
TGTTGTTGCTCCGGTGGTTG+GGG 0.477662 1.2:+60238522 None:intergenic
GTTCCATCAGGTTGACCACC+AGG 0.484332 1.2:+60239104 None:intergenic
TCAACCTGATGGAACTCAGC+TGG 0.487041 1.2:-60239096 MS.gene055556:CDS
CCAGCAGGCATCGGTCCTCT+TGG 0.488412 1.2:+60238681 None:intergenic
TTGATACTGATTTCCCCAAA+AGG 0.488519 1.2:+60239004 None:intergenic
CCAAGAGGACCGATGCCTGC+TGG 0.496911 1.2:-60238681 MS.gene055556:CDS
TGTCCCAGCTGAGTTCCATC+AGG 0.498006 1.2:+60239092 None:intergenic
TCTTGGTTGACATTGTGCCT+AGG 0.499762 1.2:-60238734 MS.gene055556:CDS
CCTCAAAATGCACAGCAAGC+TGG 0.503997 1.2:-60238621 MS.gene055556:CDS
ATCACACTGAAGAGAACAAA+AGG 0.504661 1.2:-60238815 MS.gene055556:CDS
TACCAGCCAAACCCAATGAC+TGG 0.504830 1.2:-60239167 MS.gene055556:CDS
GACTGTGGAGCATACATGTT+GGG 0.509025 1.2:+60238573 None:intergenic
GGCGTGTGAAATGTTCATAT+TGG 0.517805 1.2:-60238859 MS.gene055556:CDS
CCATCAGCAGGTCCTCCAGC+AGG 0.525310 1.2:+60238666 None:intergenic
TGGTATGGATTAGAACCGTA+TGG 0.527698 1.2:+60239185 None:intergenic
TCTTGATCCTTGCCAAGGGA+AGG 0.527734 1.2:+60238946 None:intergenic
AATATGGGTGTTGTTGGTAG+TGG 0.529665 1.2:-60239218 MS.gene055556:CDS
TCATCTTTCAAGTCCTCCCT+AGG 0.530171 1.2:+60238717 None:intergenic
CATGGCCAAAACCCAAATAT+GGG 0.534350 1.2:-60239233 MS.gene055556:CDS
GGATTATGCATCATGAGTCC+AGG 0.538672 1.2:+60238594 None:intergenic
CAACCTGATGGAACTCAGCT+GGG 0.543463 1.2:-60239095 MS.gene055556:CDS
CAATAAGGAATTCCATCAGC+AGG 0.543484 1.2:+60238654 None:intergenic
GGCGATTGTTGTTGCTCCGG+TGG 0.545817 1.2:+60238516 None:intergenic
AATCTTCTTGATCCTTGCCA+AGG 0.551207 1.2:+60238941 None:intergenic
GATGATATCAGCTGAGGCGC+CGG 0.551962 1.2:-60238895 MS.gene055556:CDS
CCTGCTGGAGGACCTGCTGA+TGG 0.553104 1.2:-60238666 MS.gene055556:CDS
CAACCTGGTGGTCAACCTGA+TGG 0.553542 1.2:-60239107 MS.gene055556:CDS
GAAGGCGATTGTTGTTGCTC+CGG 0.554014 1.2:+60238513 None:intergenic
ATAAGAATCTAATGATCTGA+AGG 0.560767 1.2:+60238495 None:intergenic
GACATTGCAGCAGCAATCAC+AGG 0.562745 1.2:-60238774 MS.gene055556:CDS
GAAGATTATGAAGGCTGATG+AGG 0.566353 1.2:-60238925 MS.gene055556:CDS
ACCCAATGACTGGGTCACCT+GGG 0.574510 1.2:-60239157 MS.gene055556:CDS
GCAGGTCCTCCAGCAGGCAT+CGG 0.575223 1.2:+60238672 None:intergenic
GGTATGGATTAGAACCGTAT+GGG 0.576207 1.2:+60239186 None:intergenic
GGTTGACATTGTGCCTAGGG+AGG 0.582771 1.2:-60238730 MS.gene055556:CDS
ATCTTCTTGATCCTTGCCAA+GGG 0.584713 1.2:+60238942 None:intergenic
TCCACAGTCTCATCCATACA+TGG 0.588194 1.2:-60238559 MS.gene055556:CDS
TCCTTGCCAAGGGAAGGCTG+TGG 0.591000 1.2:+60238952 None:intergenic
ACCACAGCCTTCCCTTGGCA+AGG 0.592871 1.2:-60238953 MS.gene055556:CDS
GGCGCCGGTTGTATTTGCAA+GGG 0.593275 1.2:-60238880 MS.gene055556:CDS
ACAGAGGGAACAACCATCCC+AGG 0.593577 1.2:+60239140 None:intergenic
AAGGATCAAGAAGATTATGA+AGG 0.595150 1.2:-60238934 MS.gene055556:CDS
AGTGGACAAATGGCCCCATA+CGG 0.596575 1.2:-60239200 MS.gene055556:CDS
AGAATGGATCATCAAGGTCA+TGG 0.604516 1.2:-60239251 MS.gene055556:CDS
AATGACTGGGTCACCTGGGA+TGG 0.607597 1.2:-60239153 MS.gene055556:CDS
TGAAACAGAATGGATCATCA+AGG 0.611963 1.2:-60239257 None:intergenic
TCTGTTGGGACTATTCAACC+TGG 0.614722 1.2:-60239122 MS.gene055556:CDS
CATACATGGCACCTCAAATG+TGG 0.616231 1.2:-60238545 MS.gene055556:CDS
ACCAGCCAAACCCAATGACT+GGG 0.624633 1.2:-60239166 MS.gene055556:CDS
AGAGGACCGATGCCTGCTGG+AGG 0.625695 1.2:-60238678 MS.gene055556:CDS
TCAGTATCAAGAAATTGAGA+AGG 0.629465 1.2:-60238991 MS.gene055556:CDS
AGTGTGATTCCAAGAACGCA+AGG 0.629484 1.2:+60238830 None:intergenic
GGTTGAATAGTCCCAACAGA+GGG 0.660370 1.2:+60239125 None:intergenic
TGTGAAGATGATATCAGCTG+AGG 0.675937 1.2:-60238901 MS.gene055556:CDS
GAAGTGCTTGCATTACCAAG+AGG 0.676504 1.2:-60238696 MS.gene055556:CDS
GTTGGGACTATTCAACCTGG+TGG 0.686021 1.2:-60239119 MS.gene055556:CDS
AGACTGTGGAGCATACATGT+TGG 0.689302 1.2:+60238572 None:intergenic
GTATGGATTAGAACCGTATG+GGG 0.698616 1.2:+60239187 None:intergenic
GCCATGTATGGATGAGACTG+TGG 0.701999 1.2:+60238558 None:intergenic
AGGTTGAATAGTCCCAACAG+AGG 0.742829 1.2:+60239124 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTGATATCTTTGATTTCT+TGG - chr1.2:60239000-60239019 MS.gene055556:CDS 25.0%
AAGGATCAAGAAGATTATGA+AGG - chr1.2:60238817-60238836 MS.gene055556:CDS 30.0%
TCAGTATCAAGAAATTGAGA+AGG - chr1.2:60238760-60238779 MS.gene055556:CDS 30.0%
! TGCAATGTCATTCTTTTGAA+GGG + chr1.2:60238966-60238985 None:intergenic 30.0%
ATCACACTGAAGAGAACAAA+AGG - chr1.2:60238936-60238955 MS.gene055556:CDS 35.0%
TACCAACAACACCCATATTT+GGG + chr1.2:60238532-60238551 None:intergenic 35.0%
! CTGCAATGTCATTCTTTTGA+AGG + chr1.2:60238967-60238986 None:intergenic 35.0%
!! TTGATACTGATTTCCCCAAA+AGG + chr1.2:60238750-60238769 None:intergenic 35.0%
AATCTTCTTGATCCTTGCCA+AGG + chr1.2:60238813-60238832 None:intergenic 40.0%
ATCTTCTTGATCCTTGCCAA+GGG + chr1.2:60238812-60238831 None:intergenic 40.0%
CAATAAGGAATTCCATCAGC+AGG + chr1.2:60239100-60239119 None:intergenic 40.0%
CATGGCCAAAACCCAAATAT+GGG - chr1.2:60238518-60238537 MS.gene055556:CDS 40.0%
CTACCAACAACACCCATATT+TGG + chr1.2:60238533-60238552 None:intergenic 40.0%
GAAGATTATGAAGGCTGATG+AGG - chr1.2:60238826-60238845 MS.gene055556:CDS 40.0%
GGCGTGTGAAATGTTCATAT+TGG - chr1.2:60238892-60238911 MS.gene055556:CDS 40.0%
TCATGGCCAAAACCCAAATA+TGG - chr1.2:60238517-60238536 MS.gene055556:CDS 40.0%
TGTGAAGATGATATCAGCTG+AGG - chr1.2:60238850-60238869 MS.gene055556:CDS 40.0%
! AACAACAACTCCAGACCTTT+TGG - chr1.2:60238732-60238751 MS.gene055556:CDS 40.0%
! AACCCAAATATGGGTGTTGT+TGG - chr1.2:60238527-60238546 MS.gene055556:CDS 40.0%
! ACAACAACTCCAGACCTTTT+GGG - chr1.2:60238733-60238752 MS.gene055556:CDS 40.0%
!! AATATGGGTGTTGTTGGTAG+TGG - chr1.2:60238533-60238552 MS.gene055556:CDS 40.0%
!! CAACACCCATATTTGGGTTT+TGG + chr1.2:60238526-60238545 None:intergenic 40.0%
!! GGTATGGATTAGAACCGTAT+GGG + chr1.2:60238568-60238587 None:intergenic 40.0%
!! GTATGGATTAGAACCGTATG+GGG + chr1.2:60238567-60238586 None:intergenic 40.0%
!! TGGTATGGATTAGAACCGTA+TGG + chr1.2:60238569-60238588 None:intergenic 40.0%
!! TGTTGTTGGTAGTGGACAAA+TGG - chr1.2:60238541-60238560 MS.gene055556:CDS 40.0%
AGACTGTGGAGCATACATGT+TGG + chr1.2:60239182-60239201 None:intergenic 45.0%
AGGTTGAATAGTCCCAACAG+AGG + chr1.2:60238630-60238649 None:intergenic 45.0%
AGTGTGATTCCAAGAACGCA+AGG + chr1.2:60238924-60238943 None:intergenic 45.0%
CATACATGGCACCTCAAATG+TGG - chr1.2:60239206-60239225 MS.gene055556:CDS 45.0%
CTTGGTTGACATTGTGCCTA+GGG - chr1.2:60239018-60239037 MS.gene055556:CDS 45.0%
GACTGTGGAGCATACATGTT+GGG + chr1.2:60239181-60239200 None:intergenic 45.0%
GGATTATGCATCATGAGTCC+AGG + chr1.2:60239160-60239179 None:intergenic 45.0%
GGTTGAATAGTCCCAACAGA+GGG + chr1.2:60238629-60238648 None:intergenic 45.0%
TCCACAGTCTCATCCATACA+TGG - chr1.2:60239192-60239211 MS.gene055556:CDS 45.0%
TCTGTTGGGACTATTCAACC+TGG - chr1.2:60238629-60238648 MS.gene055556:CDS 45.0%
TCTTGGTTGACATTGTGCCT+AGG - chr1.2:60239017-60239036 MS.gene055556:CDS 45.0%
TGAGGCGGCATATAGCAATA+AGG + chr1.2:60239115-60239134 None:intergenic 45.0%
TGGAGTTAACCTTGCGTTCT+TGG - chr1.2:60238912-60238931 MS.gene055556:CDS 45.0%
! ACTGATTTCCCCAAAAGGTC+TGG + chr1.2:60238745-60238764 None:intergenic 45.0%
! CAACAACTCCAGACCTTTTG+GGG - chr1.2:60238734-60238753 MS.gene055556:CDS 45.0%
! CACATTTGAGGTGCCATGTA+TGG + chr1.2:60239208-60239227 None:intergenic 45.0%
! GAAGTGCTTGCATTACCAAG+AGG - chr1.2:60239055-60239074 MS.gene055556:CDS 45.0%
! TCATCTTTCAAGTCCTCCCT+AGG + chr1.2:60239037-60239056 None:intergenic 45.0%
ACCAGCCAAACCCAATGACT+GGG - chr1.2:60238585-60238604 MS.gene055556:CDS 50.0%
AGTGGACAAATGGCCCCATA+CGG - chr1.2:60238551-60238570 MS.gene055556:CDS 50.0%
CAAAAACCACAGCCTTCCCT+TGG - chr1.2:60238793-60238812 MS.gene055556:CDS 50.0%
CAACCTGATGGAACTCAGCT+GGG - chr1.2:60238656-60238675 MS.gene055556:CDS 50.0%
CACGCCCTTGCAAATACAAC+CGG + chr1.2:60238878-60238897 None:intergenic 50.0%
CCTCAAAATGCACAGCAAGC+TGG - chr1.2:60239130-60239149 MS.gene055556:CDS 50.0%
GACATTGCAGCAGCAATCAC+AGG - chr1.2:60238977-60238996 MS.gene055556:CDS 50.0%
GCCATGTATGGATGAGACTG+TGG + chr1.2:60239196-60239215 None:intergenic 50.0%
GGATGGTTGTTCCCTCTGTT+GGG - chr1.2:60238615-60238634 MS.gene055556:CDS 50.0%
GTCATTGGGTTTGGCTGGTA+TGG + chr1.2:60238584-60238603 None:intergenic 50.0%
GTTGGGACTATTCAACCTGG+TGG - chr1.2:60238632-60238651 MS.gene055556:CDS 50.0%
TACCAGCCAAACCCAATGAC+TGG - chr1.2:60238584-60238603 MS.gene055556:CDS 50.0%
TCAACCTGATGGAACTCAGC+TGG - chr1.2:60238655-60238674 MS.gene055556:CDS 50.0%
TCTTGATCCTTGCCAAGGGA+AGG + chr1.2:60238808-60238827 None:intergenic 50.0%
! ATTGTTGTTGCTCCGGTGGT+TGG + chr1.2:60239234-60239253 None:intergenic 50.0%
! GAAGGCGATTGTTGTTGCTC+CGG + chr1.2:60239241-60239260 None:intergenic 50.0%
! TTGTTGTTGCTCCGGTGGTT+GGG + chr1.2:60239233-60239252 None:intergenic 50.0%
!!! CCAGCTTGCTGTGCATTTTG+AGG + chr1.2:60239133-60239152 None:intergenic 50.0%
!!! GCTTGCTGTGCATTTTGAGG+CGG + chr1.2:60239130-60239149 None:intergenic 50.0%
AACCCAATGACTGGGTCACC+TGG - chr1.2:60238593-60238612 MS.gene055556:CDS 55.0%
AATGACTGGGTCACCTGGGA+TGG - chr1.2:60238598-60238617 MS.gene055556:CDS 55.0%
ACAGAGGGAACAACCATCCC+AGG + chr1.2:60238614-60238633 None:intergenic 55.0%
ACCCAATGACTGGGTCACCT+GGG - chr1.2:60238594-60238613 MS.gene055556:CDS 55.0%
ACCCAGTCATTGGGTTTGGC+TGG + chr1.2:60238589-60238608 None:intergenic 55.0%
ATCCCAGGTGACCCAGTCAT+TGG + chr1.2:60238599-60238618 None:intergenic 55.0%
CAACCTGGTGGTCAACCTGA+TGG - chr1.2:60238644-60238663 MS.gene055556:CDS 55.0%
GATGATATCAGCTGAGGCGC+CGG - chr1.2:60238856-60238875 MS.gene055556:CDS 55.0%
GCACAGCAAGCTGGAAATCC+TGG - chr1.2:60239139-60239158 MS.gene055556:CDS 55.0%
GGGATGGTTGTTCCCTCTGT+TGG - chr1.2:60238614-60238633 MS.gene055556:CDS 55.0%
GGTGACCCAGTCATTGGGTT+TGG + chr1.2:60238593-60238612 None:intergenic 55.0%
GGTTGACATTGTGCCTAGGG+AGG - chr1.2:60239021-60239040 MS.gene055556:CDS 55.0%
TCAAATGTGGCCCCAACCAC+CGG - chr1.2:60239219-60239238 MS.gene055556:CDS 55.0%
TCCCAGGTGACCCAGTCATT+GGG + chr1.2:60238598-60238617 None:intergenic 55.0%
TGTCCCAGCTGAGTTCCATC+AGG + chr1.2:60238662-60238681 None:intergenic 55.0%
TGTTGTTGCTCCGGTGGTTG+GGG + chr1.2:60239232-60239251 None:intergenic 55.0%
!! AGGCGCCGGTTGTATTTGCA+AGG - chr1.2:60238870-60238889 MS.gene055556:CDS 55.0%
!! GGCGCCGGTTGTATTTGCAA+GGG - chr1.2:60238871-60238890 MS.gene055556:CDS 55.0%
!! GTTCCATCAGGTTGACCACC+AGG + chr1.2:60238650-60238669 None:intergenic 55.0%
ACCACAGCCTTCCCTTGGCA+AGG - chr1.2:60238798-60238817 MS.gene055556:CDS 60.0%
GGTGGTTGGGGCCACATTTG+AGG + chr1.2:60239220-60239239 None:intergenic 60.0%
TCCTTGCCAAGGGAAGGCTG+TGG + chr1.2:60238802-60238821 None:intergenic 60.0%
! GGCGATTGTTGTTGCTCCGG+TGG + chr1.2:60239238-60239257 None:intergenic 60.0%
AGAGGACCGATGCCTGCTGG+AGG - chr1.2:60239073-60239092 MS.gene055556:CDS 65.0%
CCAAGAGGACCGATGCCTGC+TGG - chr1.2:60239070-60239089 MS.gene055556:CDS 65.0%
CCATCAGCAGGTCCTCCAGC+AGG + chr1.2:60239088-60239107 None:intergenic 65.0%
CCTGCTGGAGGACCTGCTGA+TGG - chr1.2:60239085-60239104 MS.gene055556:CDS 65.0%
GCAGGTCCTCCAGCAGGCAT+CGG + chr1.2:60239082-60239101 None:intergenic 65.0%
!! CCAGCAGGCATCGGTCCTCT+TGG + chr1.2:60239073-60239092 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 60238503 60239270 60238503 ID=MS.gene055556
chr1.2 mRNA 60238503 60239270 60238503 ID=MS.gene055556.t1;Parent=MS.gene055556
chr1.2 exon 60238503 60239270 60238503 ID=MS.gene055556.t1.exon1;Parent=MS.gene055556.t1
chr1.2 CDS 60238503 60239270 60238503 ID=cds.MS.gene055556.t1;Parent=MS.gene055556.t1
Gene Sequence

>MS.gene055556

ATGGATCATCAAGGTCATGGCCAAAACCCAAATATGGGTGTTGTTGGTAGTGGACAAATGGCCCCATACGGTTCTAATCCATACCAGCCAAACCCAATGACTGGGTCACCTGGGATGGTTGTTCCCTCTGTTGGGACTATTCAACCTGGTGGTCAACCTGATGGAACTCAGCTGGGACAACATCAGCTTGCTTATCAGCACATTCATCAGCAGCAACAGCAGCAGCAACAACAACAACTCCAGACCTTTTGGGGAAATCAGTATCAAGAAATTGAGAAGGTAACTGATTTCAAAAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTGAAGATGATATCAGCTGAGGCGCCGGTTGTATTTGCAAGGGCGTGTGAAATGTTCATATTGGAGTTAACCTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACCCTTCAAAAGAATGACATTGCAGCAGCAATCACAGGAACTGATATCTTTGATTTCTTGGTTGACATTGTGCCTAGGGAGGACTTGAAAGATGAAGTGCTTGCATTACCAAGAGGACCGATGCCTGCTGGAGGACCTGCTGATGGAATTCCTTATTGCTATATGCCGCCTCAAAATGCACAGCAAGCTGGAAATCCTGGACTCATGATGCATAATCCCAACATGTATGCTCCACAGTCTCATCCATACATGGCACCTCAAATGTGGCCCCAACCACCGGAGCAACAACAATCGCCTTCAGATCATTAG
Protein sequence

>MS.gene055556.t1

MDHQGHGQNPNMGVVGSGQMAPYGSNPYQPNPMTGSPGMVVPSVGTIQPGGQPDGTQLGQHQLAYQHIHQQQQQQQQQQLQTFWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPREDLKDEVLALPRGPMPAGGPADGIPYCYMPPQNAQQAGNPGLMMHNPNMYAPQSHPYMAPQMWPQPPEQQQSPSDH