AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44078

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44078.t1 MTR_1g082660 98.828 256 2 1 1 255 1 256 0.0 518
MS.gene44078.t1 MTR_7g113680 81.154 260 44 2 1 255 52 311 8.81e-145 407
MS.gene44078.t1 MTR_3g099180 82.524 103 18 0 83 185 37 139 2.32e-58 185
MS.gene44078.t1 MTR_3g099180 82.524 103 18 0 83 185 37 139 2.34e-58 185
MS.gene44078.t1 MTR_2g023340 50.000 184 70 7 82 254 66 238 2.89e-53 172
MS.gene44078.t1 MTR_2g081600 59.341 91 36 1 100 189 21 111 1.05e-32 116
MS.gene44078.t1 MTR_2g081630 63.855 83 29 1 100 181 21 103 4.21e-32 114
MS.gene44078.t1 MTR_3g012030 39.744 78 47 0 102 179 9 86 5.52e-12 64.7
MS.gene44078.t1 MTR_8g041420 37.179 78 49 0 102 179 9 86 1.40e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44078.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene44078.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene44078.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene44078.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene44078.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene44078.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene44078.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene44078.t1 AT1G56170 67.785 149 34 3 80 226 55 191 1.70e-66 205
MS.gene44078.t1 AT1G56170 67.785 149 34 3 80 226 55 191 1.70e-66 205
MS.gene44078.t1 AT3G48590 69.863 146 41 3 83 228 47 189 3.01e-64 201
MS.gene44078.t1 AT5G63470 68.456 149 41 3 83 228 60 205 1.65e-61 194
MS.gene44078.t1 AT5G63470 68.456 149 41 3 83 228 60 205 1.65e-61 194
MS.gene44078.t1 AT5G50480 48.276 174 55 7 79 243 35 182 6.17e-44 147
MS.gene44078.t1 AT5G27910 47.794 136 61 3 78 206 16 148 1.11e-35 125
MS.gene44078.t1 AT5G50490 39.106 179 90 6 71 244 9 173 3.02e-32 117
MS.gene44078.t1 AT5G50470 48.148 108 47 2 79 180 44 148 1.17e-28 108
MS.gene44078.t1 AT5G38140 45.000 100 51 2 80 178 48 144 5.00e-26 101

Find 88 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGATATCTTTGATTTCT+TGG 0.152930 1.3:+58221656 MS.gene44078:CDS
CTACCAACAACACCCATATT+TGG 0.174332 1.3:-58221186 None:intergenic
TGGAGTTAACCTTGCGTTCT+TGG 0.214555 1.3:+58221568 MS.gene44078:CDS
TCATGGCCAAAACCCAAATA+TGG 0.254115 1.3:+58221173 MS.gene44078:CDS
AACAACAACTCCAGACCTTT+TGG 0.267438 1.3:+58221388 MS.gene44078:CDS
CAACACCCATATTTGGGTTT+TGG 0.289322 1.3:-58221179 None:intergenic
GTCATTGGGTTTGGCTGGTA+TGG 0.344732 1.3:-58221237 None:intergenic
TACCAACAACACCCATATTT+GGG 0.353196 1.3:-58221185 None:intergenic
ATTGTTGTTGCTCCGGTGGT+TGG 0.362576 1.3:-58221887 None:intergenic
TTGTTGTTGCTCCGGTGGTT+GGG 0.366842 1.3:-58221886 None:intergenic
GGTGACCCAGTCATTGGGTT+TGG 0.375542 1.3:-58221246 None:intergenic
GGGATGGTTGTTCCCTCTGT+TGG 0.377579 1.3:+58221270 MS.gene44078:CDS
GCACAGCAAGCTGGAAATCC+TGG 0.386872 1.3:+58221795 MS.gene44078:CDS
GGATGGTTGTTCCCTCTGTT+GGG 0.395560 1.3:+58221271 MS.gene44078:CDS
ATCCCAGGTGACCCAGTCAT+TGG 0.407383 1.3:-58221252 None:intergenic
TGAGGCGGCATATAGCAATA+AGG 0.408347 1.3:-58221768 None:intergenic
ACCCAGTCATTGGGTTTGGC+TGG 0.417557 1.3:-58221242 None:intergenic
AACCCAATGACTGGGTCACC+TGG 0.422707 1.3:+58221249 MS.gene44078:CDS
GGTGGTTGGGGCCACATTTG+AGG 0.430701 1.3:-58221873 None:intergenic
CACGCCCTTGCAAATACAAC+CGG 0.432250 1.3:-58221531 None:intergenic
CTTGGTTGACATTGTGCCTA+GGG 0.441263 1.3:+58221674 MS.gene44078:CDS
AACCCAAATATGGGTGTTGT+TGG 0.445950 1.3:+58221183 MS.gene44078:CDS
ACTGATTTCCCCAAAAGGTC+TGG 0.448617 1.3:-58221398 None:intergenic
TCCCAGGTGACCCAGTCATT+GGG 0.450412 1.3:-58221251 None:intergenic
CACATTTGAGGTGCCATGTA+TGG 0.456179 1.3:-58221861 None:intergenic
TCAAATGTGGCCCCAACCAC+CGG 0.464006 1.3:+58221875 MS.gene44078:CDS
AGGCGCCGGTTGTATTTGCA+AGG 0.466746 1.3:+58221526 MS.gene44078:CDS
TGTTGTTGGTAGTGGACAAA+TGG 0.476420 1.3:+58221197 MS.gene44078:CDS
TGTTGTTGCTCCGGTGGTTG+GGG 0.477662 1.3:-58221885 None:intergenic
GTTCCATCAGGTTGACCACC+AGG 0.484332 1.3:-58221303 None:intergenic
TCAACCTGATGGAACTCAGC+TGG 0.487041 1.3:+58221311 MS.gene44078:CDS
CCAGCAGGCATCGGTCCTCT+TGG 0.488412 1.3:-58221726 None:intergenic
TTGATACTGATTTCCCCAAA+AGG 0.488519 1.3:-58221403 None:intergenic
CCAAGAGGACCGATGCCTGC+TGG 0.496911 1.3:+58221726 MS.gene44078:CDS
TGTCCCAGCTGAGTTCCATC+AGG 0.498006 1.3:-58221315 None:intergenic
TCTTGGTTGACATTGTGCCT+AGG 0.499762 1.3:+58221673 MS.gene44078:CDS
CCTCAAAATGCACAGCAAGC+TGG 0.503997 1.3:+58221786 MS.gene44078:CDS
ATCACACTGAAGAGAACAAA+AGG 0.504661 1.3:+58221592 MS.gene44078:CDS
TACCAGCCAAACCCAATGAC+TGG 0.504830 1.3:+58221240 MS.gene44078:CDS
GACTGTGGAGCATACATGTT+GGG 0.509025 1.3:-58221834 None:intergenic
GGCGTGTGAAATGTTCATAT+TGG 0.517805 1.3:+58221548 MS.gene44078:CDS
CCATCAGCAGGTCCTCCAGC+AGG 0.525310 1.3:-58221741 None:intergenic
TGGTATGGATTAGAACCGTA+TGG 0.527698 1.3:-58221222 None:intergenic
TCTTGATCCTTGCCAAGGGA+AGG 0.527734 1.3:-58221461 None:intergenic
AATATGGGTGTTGTTGGTAG+TGG 0.529665 1.3:+58221189 MS.gene44078:CDS
TCATCTTTCAAGTCCTCCCT+AGG 0.530171 1.3:-58221690 None:intergenic
CATGGCCAAAACCCAAATAT+GGG 0.534350 1.3:+58221174 MS.gene44078:CDS
GGATTATGCATCATGAGTCC+AGG 0.538672 1.3:-58221813 None:intergenic
CAACCTGATGGAACTCAGCT+GGG 0.543463 1.3:+58221312 MS.gene44078:CDS
CAATAAGGAATTCCATCAGC+AGG 0.543484 1.3:-58221753 None:intergenic
GGCGATTGTTGTTGCTCCGG+TGG 0.545817 1.3:-58221891 None:intergenic
AATCTTCTTGATCCTTGCCA+AGG 0.551207 1.3:-58221466 None:intergenic
GATGATATCAGCTGAGGCGC+CGG 0.551962 1.3:+58221512 MS.gene44078:CDS
CCTGCTGGAGGACCTGCTGA+TGG 0.553104 1.3:+58221741 MS.gene44078:CDS
CAACCTGGTGGTCAACCTGA+TGG 0.553542 1.3:+58221300 MS.gene44078:CDS
GAAGGCGATTGTTGTTGCTC+CGG 0.554014 1.3:-58221894 None:intergenic
ATAAGAATCTAATGATCTGA+AGG 0.560767 1.3:-58221912 None:intergenic
GACATTGCAGCAGCAATCAC+AGG 0.562745 1.3:+58221633 MS.gene44078:CDS
GAAGATTATGAAGGCTGATG+AGG 0.566353 1.3:+58221482 MS.gene44078:CDS
ACCCAATGACTGGGTCACCT+GGG 0.574510 1.3:+58221250 MS.gene44078:CDS
GCAGGTCCTCCAGCAGGCAT+CGG 0.575223 1.3:-58221735 None:intergenic
GGTATGGATTAGAACCGTAT+GGG 0.576207 1.3:-58221221 None:intergenic
GGTTGACATTGTGCCTAGGG+AGG 0.582771 1.3:+58221677 MS.gene44078:CDS
ATCTTCTTGATCCTTGCCAA+GGG 0.584713 1.3:-58221465 None:intergenic
TCCACAGTCTCATCCATACA+TGG 0.588194 1.3:+58221848 MS.gene44078:CDS
TCCTTGCCAAGGGAAGGCTG+TGG 0.591000 1.3:-58221455 None:intergenic
ACCACAGCCTTCCCTTGGCA+AGG 0.592871 1.3:+58221454 MS.gene44078:CDS
GGCGCCGGTTGTATTTGCAA+GGG 0.593275 1.3:+58221527 MS.gene44078:CDS
ACAGAGGGAACAACCATCCC+AGG 0.593577 1.3:-58221267 None:intergenic
AAGGATCAAGAAGATTATGA+AGG 0.595150 1.3:+58221473 MS.gene44078:CDS
AGTGGACAAATGGCCCCATA+CGG 0.596575 1.3:+58221207 MS.gene44078:CDS
AGAATGGATCATCAAGGTCA+TGG 0.604516 1.3:+58221156 None:intergenic
AATGACTGGGTCACCTGGGA+TGG 0.607597 1.3:+58221254 MS.gene44078:CDS
TGAAACAGAATGGATCATCA+AGG 0.611963 1.3:+58221150 None:intergenic
TCTGTTGGGACTATTCAACC+TGG 0.614722 1.3:+58221285 MS.gene44078:CDS
CATACATGGCACCTCAAATG+TGG 0.616231 1.3:+58221862 MS.gene44078:CDS
ACCAGCCAAACCCAATGACT+GGG 0.624633 1.3:+58221241 MS.gene44078:CDS
AGAGGACCGATGCCTGCTGG+AGG 0.625695 1.3:+58221729 MS.gene44078:CDS
TCAGTATCAAGAAATTGAGA+AGG 0.629465 1.3:+58221416 MS.gene44078:CDS
AGTGTGATTCCAAGAACGCA+AGG 0.629484 1.3:-58221577 None:intergenic
GGTTGAATAGTCCCAACAGA+GGG 0.660370 1.3:-58221282 None:intergenic
TGTGAAGATGATATCAGCTG+AGG 0.675937 1.3:+58221506 MS.gene44078:CDS
GAAGTGCTTGCATTACCAAG+AGG 0.676504 1.3:+58221711 MS.gene44078:CDS
GTTGGGACTATTCAACCTGG+TGG 0.686021 1.3:+58221288 MS.gene44078:CDS
AGACTGTGGAGCATACATGT+TGG 0.689302 1.3:-58221835 None:intergenic
GTATGGATTAGAACCGTATG+GGG 0.698616 1.3:-58221220 None:intergenic
GCCATGTATGGATGAGACTG+TGG 0.701999 1.3:-58221849 None:intergenic
AGGTTGAATAGTCCCAACAG+AGG 0.742829 1.3:-58221283 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTGATATCTTTGATTTCT+TGG + chr1.3:58221656-58221675 MS.gene44078:CDS 25.0%
AAGGATCAAGAAGATTATGA+AGG + chr1.3:58221473-58221492 MS.gene44078:CDS 30.0%
TCAGTATCAAGAAATTGAGA+AGG + chr1.3:58221416-58221435 MS.gene44078:CDS 30.0%
! TGCAATGTCATTCTTTTGAA+GGG - chr1.3:58221622-58221641 None:intergenic 30.0%
ATCACACTGAAGAGAACAAA+AGG + chr1.3:58221592-58221611 MS.gene44078:CDS 35.0%
TACCAACAACACCCATATTT+GGG - chr1.3:58221188-58221207 None:intergenic 35.0%
! CTGCAATGTCATTCTTTTGA+AGG - chr1.3:58221623-58221642 None:intergenic 35.0%
!! TTGATACTGATTTCCCCAAA+AGG - chr1.3:58221406-58221425 None:intergenic 35.0%
AATCTTCTTGATCCTTGCCA+AGG - chr1.3:58221469-58221488 None:intergenic 40.0%
ATCTTCTTGATCCTTGCCAA+GGG - chr1.3:58221468-58221487 None:intergenic 40.0%
CAATAAGGAATTCCATCAGC+AGG - chr1.3:58221756-58221775 None:intergenic 40.0%
CATGGCCAAAACCCAAATAT+GGG + chr1.3:58221174-58221193 MS.gene44078:CDS 40.0%
CTACCAACAACACCCATATT+TGG - chr1.3:58221189-58221208 None:intergenic 40.0%
GAAGATTATGAAGGCTGATG+AGG + chr1.3:58221482-58221501 MS.gene44078:CDS 40.0%
GGCGTGTGAAATGTTCATAT+TGG + chr1.3:58221548-58221567 MS.gene44078:CDS 40.0%
TCATGGCCAAAACCCAAATA+TGG + chr1.3:58221173-58221192 MS.gene44078:CDS 40.0%
TGTGAAGATGATATCAGCTG+AGG + chr1.3:58221506-58221525 MS.gene44078:CDS 40.0%
! AACAACAACTCCAGACCTTT+TGG + chr1.3:58221388-58221407 MS.gene44078:CDS 40.0%
! AACCCAAATATGGGTGTTGT+TGG + chr1.3:58221183-58221202 MS.gene44078:CDS 40.0%
! ACAACAACTCCAGACCTTTT+GGG + chr1.3:58221389-58221408 MS.gene44078:CDS 40.0%
!! AATATGGGTGTTGTTGGTAG+TGG + chr1.3:58221189-58221208 MS.gene44078:CDS 40.0%
!! CAACACCCATATTTGGGTTT+TGG - chr1.3:58221182-58221201 None:intergenic 40.0%
!! GGTATGGATTAGAACCGTAT+GGG - chr1.3:58221224-58221243 None:intergenic 40.0%
!! GTATGGATTAGAACCGTATG+GGG - chr1.3:58221223-58221242 None:intergenic 40.0%
!! TGGTATGGATTAGAACCGTA+TGG - chr1.3:58221225-58221244 None:intergenic 40.0%
!! TGTTGTTGGTAGTGGACAAA+TGG + chr1.3:58221197-58221216 MS.gene44078:CDS 40.0%
AGACTGTGGAGCATACATGT+TGG - chr1.3:58221838-58221857 None:intergenic 45.0%
AGGTTGAATAGTCCCAACAG+AGG - chr1.3:58221286-58221305 None:intergenic 45.0%
AGTGTGATTCCAAGAACGCA+AGG - chr1.3:58221580-58221599 None:intergenic 45.0%
CATACATGGCACCTCAAATG+TGG + chr1.3:58221862-58221881 MS.gene44078:CDS 45.0%
CTTGGTTGACATTGTGCCTA+GGG + chr1.3:58221674-58221693 MS.gene44078:CDS 45.0%
GACTGTGGAGCATACATGTT+GGG - chr1.3:58221837-58221856 None:intergenic 45.0%
GGATTATGCATCATGAGTCC+AGG - chr1.3:58221816-58221835 None:intergenic 45.0%
GGTTGAATAGTCCCAACAGA+GGG - chr1.3:58221285-58221304 None:intergenic 45.0%
TCCACAGTCTCATCCATACA+TGG + chr1.3:58221848-58221867 MS.gene44078:CDS 45.0%
TCTGTTGGGACTATTCAACC+TGG + chr1.3:58221285-58221304 MS.gene44078:CDS 45.0%
TCTTGGTTGACATTGTGCCT+AGG + chr1.3:58221673-58221692 MS.gene44078:CDS 45.0%
TGAGGCGGCATATAGCAATA+AGG - chr1.3:58221771-58221790 None:intergenic 45.0%
TGGAGTTAACCTTGCGTTCT+TGG + chr1.3:58221568-58221587 MS.gene44078:CDS 45.0%
! ACTGATTTCCCCAAAAGGTC+TGG - chr1.3:58221401-58221420 None:intergenic 45.0%
! CAACAACTCCAGACCTTTTG+GGG + chr1.3:58221390-58221409 MS.gene44078:CDS 45.0%
! CACATTTGAGGTGCCATGTA+TGG - chr1.3:58221864-58221883 None:intergenic 45.0%
! GAAGTGCTTGCATTACCAAG+AGG + chr1.3:58221711-58221730 MS.gene44078:CDS 45.0%
! TCATCTTTCAAGTCCTCCCT+AGG - chr1.3:58221693-58221712 None:intergenic 45.0%
ACCAGCCAAACCCAATGACT+GGG + chr1.3:58221241-58221260 MS.gene44078:CDS 50.0%
AGTGGACAAATGGCCCCATA+CGG + chr1.3:58221207-58221226 MS.gene44078:CDS 50.0%
CAAAAACCACAGCCTTCCCT+TGG + chr1.3:58221449-58221468 MS.gene44078:CDS 50.0%
CAACCTGATGGAACTCAGCT+GGG + chr1.3:58221312-58221331 MS.gene44078:CDS 50.0%
CACGCCCTTGCAAATACAAC+CGG - chr1.3:58221534-58221553 None:intergenic 50.0%
CCTCAAAATGCACAGCAAGC+TGG + chr1.3:58221786-58221805 MS.gene44078:CDS 50.0%
GACATTGCAGCAGCAATCAC+AGG + chr1.3:58221633-58221652 MS.gene44078:CDS 50.0%
GCCATGTATGGATGAGACTG+TGG - chr1.3:58221852-58221871 None:intergenic 50.0%
GGATGGTTGTTCCCTCTGTT+GGG + chr1.3:58221271-58221290 MS.gene44078:CDS 50.0%
GTCATTGGGTTTGGCTGGTA+TGG - chr1.3:58221240-58221259 None:intergenic 50.0%
GTTGGGACTATTCAACCTGG+TGG + chr1.3:58221288-58221307 MS.gene44078:CDS 50.0%
TACCAGCCAAACCCAATGAC+TGG + chr1.3:58221240-58221259 MS.gene44078:CDS 50.0%
TCAACCTGATGGAACTCAGC+TGG + chr1.3:58221311-58221330 MS.gene44078:CDS 50.0%
TCTTGATCCTTGCCAAGGGA+AGG - chr1.3:58221464-58221483 None:intergenic 50.0%
! ATTGTTGTTGCTCCGGTGGT+TGG - chr1.3:58221890-58221909 None:intergenic 50.0%
! GAAGGCGATTGTTGTTGCTC+CGG - chr1.3:58221897-58221916 None:intergenic 50.0%
! TTGTTGTTGCTCCGGTGGTT+GGG - chr1.3:58221889-58221908 None:intergenic 50.0%
!!! CCAGCTTGCTGTGCATTTTG+AGG - chr1.3:58221789-58221808 None:intergenic 50.0%
!!! GCTTGCTGTGCATTTTGAGG+CGG - chr1.3:58221786-58221805 None:intergenic 50.0%
AACCCAATGACTGGGTCACC+TGG + chr1.3:58221249-58221268 MS.gene44078:CDS 55.0%
AATGACTGGGTCACCTGGGA+TGG + chr1.3:58221254-58221273 MS.gene44078:CDS 55.0%
ACAGAGGGAACAACCATCCC+AGG - chr1.3:58221270-58221289 None:intergenic 55.0%
ACCCAATGACTGGGTCACCT+GGG + chr1.3:58221250-58221269 MS.gene44078:CDS 55.0%
ACCCAGTCATTGGGTTTGGC+TGG - chr1.3:58221245-58221264 None:intergenic 55.0%
ATCCCAGGTGACCCAGTCAT+TGG - chr1.3:58221255-58221274 None:intergenic 55.0%
CAACCTGGTGGTCAACCTGA+TGG + chr1.3:58221300-58221319 MS.gene44078:CDS 55.0%
GATGATATCAGCTGAGGCGC+CGG + chr1.3:58221512-58221531 MS.gene44078:CDS 55.0%
GCACAGCAAGCTGGAAATCC+TGG + chr1.3:58221795-58221814 MS.gene44078:CDS 55.0%
GGGATGGTTGTTCCCTCTGT+TGG + chr1.3:58221270-58221289 MS.gene44078:CDS 55.0%
GGTGACCCAGTCATTGGGTT+TGG - chr1.3:58221249-58221268 None:intergenic 55.0%
GGTTGACATTGTGCCTAGGG+AGG + chr1.3:58221677-58221696 MS.gene44078:CDS 55.0%
TCAAATGTGGCCCCAACCAC+CGG + chr1.3:58221875-58221894 MS.gene44078:CDS 55.0%
TCCCAGGTGACCCAGTCATT+GGG - chr1.3:58221254-58221273 None:intergenic 55.0%
TGTCCCAGCTGAGTTCCATC+AGG - chr1.3:58221318-58221337 None:intergenic 55.0%
TGTTGTTGCTCCGGTGGTTG+GGG - chr1.3:58221888-58221907 None:intergenic 55.0%
!! AGGCGCCGGTTGTATTTGCA+AGG + chr1.3:58221526-58221545 MS.gene44078:CDS 55.0%
!! GGCGCCGGTTGTATTTGCAA+GGG + chr1.3:58221527-58221546 MS.gene44078:CDS 55.0%
!! GTTCCATCAGGTTGACCACC+AGG - chr1.3:58221306-58221325 None:intergenic 55.0%
ACCACAGCCTTCCCTTGGCA+AGG + chr1.3:58221454-58221473 MS.gene44078:CDS 60.0%
GGTGGTTGGGGCCACATTTG+AGG - chr1.3:58221876-58221895 None:intergenic 60.0%
TCCTTGCCAAGGGAAGGCTG+TGG - chr1.3:58221458-58221477 None:intergenic 60.0%
! GGCGATTGTTGTTGCTCCGG+TGG - chr1.3:58221894-58221913 None:intergenic 60.0%
AGAGGACCGATGCCTGCTGG+AGG + chr1.3:58221729-58221748 MS.gene44078:CDS 65.0%
CCAAGAGGACCGATGCCTGC+TGG + chr1.3:58221726-58221745 MS.gene44078:CDS 65.0%
CCATCAGCAGGTCCTCCAGC+AGG - chr1.3:58221744-58221763 None:intergenic 65.0%
CCTGCTGGAGGACCTGCTGA+TGG + chr1.3:58221741-58221760 MS.gene44078:CDS 65.0%
GCAGGTCCTCCAGCAGGCAT+CGG - chr1.3:58221738-58221757 None:intergenic 65.0%
!! CCAGCAGGCATCGGTCCTCT+TGG - chr1.3:58221729-58221748 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 58221159 58221926 58221159 ID=MS.gene44078
chr1.3 mRNA 58221159 58221926 58221159 ID=MS.gene44078.t1;Parent=MS.gene44078
chr1.3 exon 58221159 58221926 58221159 ID=MS.gene44078.t1.exon1;Parent=MS.gene44078.t1
chr1.3 CDS 58221159 58221926 58221159 ID=cds.MS.gene44078.t1;Parent=MS.gene44078.t1
Gene Sequence

>MS.gene44078

ATGGATCATCAAGGTCATGGCCAAAACCCAAATATGGGTGTTGTTGGTAGTGGACAAATGGCCCCATACGGTTCTAATCCATACCAGCCAAACCCAATGACTGGGTCACCTGGGATGGTTGTTCCCTCTGTTGGGACTATTCAACCTGGTGGTCAACCTGATGGAACTCAGCTGGGACAACATCAGCTTGCTTATCAGCACATTCATCAGCAGCAACAGCAGCAGCAACAACAACAACTCCAGACCTTTTGGGGAAATCAGTATCAAGAAATTGAGAAGGTAACTGATTTCAAAAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTGAAGATGATATCAGCTGAGGCGCCGGTTGTATTTGCAAGGGCGTGTGAAATGTTCATATTGGAGTTAACCTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACCCTTCAAAAGAATGACATTGCAGCAGCAATCACAGGAACTGATATCTTTGATTTCTTGGTTGACATTGTGCCTAGGGAGGACTTGAAAGATGAAGTGCTTGCATTACCAAGAGGACCGATGCCTGCTGGAGGACCTGCTGATGGAATTCCTTATTGCTATATGCCGCCTCAAAATGCACAGCAAGCTGGAAATCCTGGACTCATGATGCATAATCCCAACATGTATGCTCCACAGTCTCATCCATACATGGCACCTCAAATGTGGCCCCAACCACCGGAGCAACAACAATCGCCTTCAGATCATTAG
Protein sequence

>MS.gene44078.t1

MDHQGHGQNPNMGVVGSGQMAPYGSNPYQPNPMTGSPGMVVPSVGTIQPGGQPDGTQLGQHQLAYQHIHQQQQQQQQQQLQTFWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPREDLKDEVLALPRGPMPAGGPADGIPYCYMPPQNAQQAGNPGLMMHNPNMYAPQSHPYMAPQMWPQPPEQQQSPSDH