Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055641.t1 | XP_013456176.1 | 94.7 | 876 | 46 | 0 | 17 | 892 | 1 | 876 | 0.00E+00 | 1560 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055641.t1 | A0A072UKG3 | 94.7 | 876 | 46 | 0 | 17 | 892 | 1 | 876 | 0.0e+00 | 1560.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055641 | MS.gene93654 | 0.814318 | 1.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 187 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACAACATTATCAATATT+TGG | 0.167395 | 4.1:+35783600 | None:intergenic |
| ACTTAAGGCATTTGGTAAAT+TGG | 0.189467 | 4.1:-35781680 | MS.gene055641:CDS |
| TATGCTAACTCAAACATTTC+AGG | 0.244923 | 4.1:-35782985 | MS.gene055641:CDS |
| CTGTAAATAACCTGGCAAAT+TGG | 0.255996 | 4.1:+35784145 | None:intergenic |
| TCGCACTGTTTGGATTTAAC+TGG | 0.289224 | 4.1:-35782433 | MS.gene055641:CDS |
| TTACTGAACTTAGCTGTCTT+TGG | 0.292819 | 4.1:+35782889 | None:intergenic |
| AAGATGCCTTGTGAGCTTTC+TGG | 0.300725 | 4.1:-35781763 | MS.gene055641:CDS |
| AAGCCCTTTGAGGAGGTTAC+TGG | 0.301316 | 4.1:-35782926 | MS.gene055641:CDS |
| TCCCGTGCTTGCGGTGATTC+CGG | 0.312952 | 4.1:+35784210 | None:intergenic |
| CGCCATTTGCATAGCATTAG+TGG | 0.313857 | 4.1:-35781791 | MS.gene055641:CDS |
| TGTCAATAAATAAGAATTAT+AGG | 0.315138 | 4.1:-35782837 | MS.gene055641:CDS |
| ATTTCCACTCTGACTGATAA+AGG | 0.319487 | 4.1:+35783258 | None:intergenic |
| AGCTTCTGATTCGCACTGTT+TGG | 0.319869 | 4.1:-35782443 | MS.gene055641:CDS |
| AATTACGATATTTCGCATTC+AGG | 0.331590 | 4.1:-35783408 | MS.gene055641:CDS |
| ACTTCTTGAGCGCTGGAAAT+CGG | 0.332738 | 4.1:-35782149 | MS.gene055641:CDS |
| CTATTCTGAAGGTTGTCTTT+AGG | 0.333834 | 4.1:+35783537 | None:intergenic |
| CCGCTTTCCTTATTGATATA+CGG | 0.347078 | 4.1:+35783726 | None:intergenic |
| AGGTTGTGACAGGAAATATT+TGG | 0.351344 | 4.1:-35783751 | MS.gene055641:CDS |
| AGAAGAGCTTGCCTCGTTGA+TGG | 0.354358 | 4.1:+35782700 | None:intergenic |
| CGGGCAAGGGGATGCGAGTC+AGG | 0.355155 | 4.1:-35782353 | MS.gene055641:CDS |
| TGTAATGATTCTCTGAATAA+AGG | 0.356747 | 4.1:-35783363 | MS.gene055641:CDS |
| GCAGATCTGGAATAAAATTC+AGG | 0.359304 | 4.1:-35784361 | MS.gene055641:CDS |
| TCCCTATCCACTTCTTTGAT+AGG | 0.360248 | 4.1:+35782784 | None:intergenic |
| AACACATTCCATTCTCTAAA+GGG | 0.362275 | 4.1:+35781854 | None:intergenic |
| TTTCTACTCATGGTGATAGA+TGG | 0.364507 | 4.1:+35784335 | None:intergenic |
| TTTGGAACCGTATATCAATA+AGG | 0.364549 | 4.1:-35783733 | MS.gene055641:CDS |
| AAACAAAACAAACTCTTTCA+TGG | 0.367807 | 4.1:+35782387 | None:intergenic |
| GGGCATAAGCTCAGCAGATC+TGG | 0.368293 | 4.1:-35784374 | MS.gene055641:CDS |
| GATTCTCTGAATAAAGGTTC+TGG | 0.368547 | 4.1:-35783357 | MS.gene055641:CDS |
| AAGAATTATAGGTCAGCTAA+TGG | 0.369571 | 4.1:-35782826 | MS.gene055641:CDS |
| AAATAAGCTTTGGACGATCT+TGG | 0.371529 | 4.1:+35782046 | None:intergenic |
| TCCTCTTCTGTTCCAACGGA+TGG | 0.372516 | 4.1:-35783999 | MS.gene055641:CDS |
| ATAATCTGCAAAATAAGCTT+TGG | 0.373329 | 4.1:+35782036 | None:intergenic |
| TCTTTCTGACAGAGTTCCTT+AGG | 0.374432 | 4.1:+35783435 | None:intergenic |
| CAACCTTTCAGTCTGCTGTT+AGG | 0.374999 | 4.1:+35783768 | None:intergenic |
| ACTGCAAAACTTAAGGCATT+TGG | 0.381002 | 4.1:-35781688 | MS.gene055641:CDS |
| TAAATGTTGGTGTTCTTGAT+TGG | 0.381552 | 4.1:-35784103 | MS.gene055641:CDS |
| TGACTGCGGTGGTTGGGATT+TGG | 0.382425 | 4.1:-35782116 | MS.gene055641:CDS |
| CACAGTTTGTCTCATTTCCT+CGG | 0.384303 | 4.1:+35783212 | None:intergenic |
| AGCTTAACCCCTTTAGAGAA+TGG | 0.386070 | 4.1:-35781862 | MS.gene055641:CDS |
| GATGGGTTATCTGGTCATTC+TGG | 0.390376 | 4.1:-35783981 | MS.gene055641:CDS |
| GTTCCAACGGATGGGTTATC+TGG | 0.392521 | 4.1:-35783990 | MS.gene055641:CDS |
| CAAGAATGTTTCCGTCAGTT+TGG | 0.395339 | 4.1:+35782629 | None:intergenic |
| TGCACCAATAGTGTTTCCTT+TGG | 0.404469 | 4.1:+35781712 | None:intergenic |
| ACTCTACCAACAGGAGAAAC+TGG | 0.405188 | 4.1:+35781619 | None:intergenic |
| AGCCAATGCTGATGCTTAAT+CGG | 0.407157 | 4.1:+35783103 | None:intergenic |
| CTTCTTGAGCGCTGGAAATC+GGG | 0.407387 | 4.1:-35782148 | MS.gene055641:CDS |
| GTGAAGAACTTAGGTGGGTT+AGG | 0.415710 | 4.1:-35782598 | MS.gene055641:CDS |
| TCATTACAGCCAAGCTCATC+AGG | 0.415880 | 4.1:+35783378 | None:intergenic |
| GTCAACAGCAAATGTGAAAA+GGG | 0.420265 | 4.1:+35782651 | None:intergenic |
| CTGAGAATTTCTGTGAAGAA+TGG | 0.424936 | 4.1:-35782679 | MS.gene055641:CDS |
| AGCTAAGTTCAGTAATTCCT+TGG | 0.425528 | 4.1:-35782881 | MS.gene055641:CDS |
| GATCATGTGACTGCGGTGGT+TGG | 0.427687 | 4.1:-35782123 | MS.gene055641:CDS |
| GGTGATGAGGAAGTAGATAT+TGG | 0.428221 | 4.1:+35783279 | None:intergenic |
| GCTGTCTTTGGTTTCAGCAA+TGG | 0.428245 | 4.1:+35782901 | None:intergenic |
| AGTGATAAACCTGGTGATAC+AGG | 0.428666 | 4.1:-35782961 | MS.gene055641:CDS |
| GGATAAGAAACATAACTTGC+AGG | 0.430112 | 4.1:+35781643 | None:intergenic |
| TTGCTTCTGCCTGTATCACC+AGG | 0.431118 | 4.1:+35782952 | None:intergenic |
| TTAAGAAGAAGAATGGAAGT+TGG | 0.434042 | 4.1:-35782528 | MS.gene055641:CDS |
| GCAGTTGTAGAGCTCTGATT+CGG | 0.434609 | 4.1:+35783039 | None:intergenic |
| CTGGGCTACAACCGACCCTT+TGG | 0.441264 | 4.1:+35782761 | None:intergenic |
| CAGAGCAGATGACCGTCTTT+CGG | 0.448021 | 4.1:-35783799 | MS.gene055641:CDS |
| CTTTCAGTCTGCTGTTAGGA+TGG | 0.451251 | 4.1:+35783772 | None:intergenic |
| CTTCATCACTTCTTGAGCGC+TGG | 0.451257 | 4.1:-35782156 | MS.gene055641:CDS |
| GCTAAGAATGTTTGTATATG+AGG | 0.452953 | 4.1:+35783501 | None:intergenic |
| GGTCAACAGCAAATGTGAAA+AGG | 0.455317 | 4.1:+35782650 | None:intergenic |
| GAATCCAAAGGAAACACTAT+TGG | 0.459294 | 4.1:-35781716 | MS.gene055641:CDS |
| GAACACATTCCATTCTCTAA+AGG | 0.462098 | 4.1:+35781853 | None:intergenic |
| ATAGCAGCAAGCTCATCATT+TGG | 0.464819 | 4.1:+35782316 | None:intergenic |
| CAGTTGTAGAGCTCTGATTC+GGG | 0.464948 | 4.1:+35783040 | None:intergenic |
| CCCACCTAAGTTCTTCACTT+TGG | 0.469144 | 4.1:+35782603 | None:intergenic |
| GATGAAGGTCCACCATTACT+AGG | 0.470858 | 4.1:+35782172 | None:intergenic |
| AGCGAGGTTAAGAAGAAGAA+TGG | 0.473593 | 4.1:-35782535 | MS.gene055641:CDS |
| TGATGATGGTCAGCAACATA+TGG | 0.475675 | 4.1:+35784275 | None:intergenic |
| GGTGCAAACTGCAAAACTTA+AGG | 0.477611 | 4.1:-35781695 | MS.gene055641:CDS |
| TATCCACCAGTTTCTCCTGT+TGG | 0.477626 | 4.1:-35781625 | MS.gene055641:CDS |
| AAGTACATGTCCAATTTGCC+AGG | 0.481266 | 4.1:-35784155 | MS.gene055641:CDS |
| GGTAGCCTTCCTGATGAGCT+TGG | 0.483459 | 4.1:-35783387 | MS.gene055641:CDS |
| GGAAGACTATGAACCCCACC+TGG | 0.485552 | 4.1:+35782193 | None:intergenic |
| ATCCACTAATGCTATGCAAA+TGG | 0.488670 | 4.1:+35781789 | None:intergenic |
| TCCTATCAAAGAAGTGGATA+GGG | 0.491641 | 4.1:-35782785 | MS.gene055641:CDS |
| CTGATGCTTAATCGGCGAAA+AGG | 0.496107 | 4.1:+35783111 | None:intergenic |
| CTTTCATTTGAGCGACGGCA+TGG | 0.497428 | 4.1:+35782464 | None:intergenic |
| CGCCGATTAAGCATCAGCAT+TGG | 0.498049 | 4.1:-35783105 | MS.gene055641:CDS |
| CTCTACTTGTAAAGAGGATG+AGG | 0.500713 | 4.1:-35783067 | MS.gene055641:CDS |
| ATCATGTGACTGCGGTGGTT+GGG | 0.501316 | 4.1:-35782122 | MS.gene055641:CDS |
| AGAATTATAGGTCAGCTAAT+GGG | 0.503130 | 4.1:-35782825 | MS.gene055641:CDS |
| TAAGGCATTTGGTAAATTGG+AGG | 0.505488 | 4.1:-35781677 | MS.gene055641:CDS |
| CACCGGAATCACCGCAAGCA+CGG | 0.505957 | 4.1:-35784212 | MS.gene055641:CDS |
| CTTGTCCTTTGAAGAATCGA+CGG | 0.507993 | 4.1:+35782732 | None:intergenic |
| ACGGCATGGGAAACATAATC+AGG | 0.511387 | 4.1:+35782478 | None:intergenic |
| GTTTACGACGAGATAAAGTC+GGG | 0.513191 | 4.1:-35784311 | MS.gene055641:CDS |
| CAACAGTTGTGCTCCCAGGT+GGG | 0.516194 | 4.1:-35782207 | MS.gene055641:CDS |
| GAAGCAAGACAAGCCCTTTG+AGG | 0.517224 | 4.1:-35782936 | MS.gene055641:CDS |
| CCTCTTCTGTTCCAACGGAT+GGG | 0.519366 | 4.1:-35783998 | MS.gene055641:CDS |
| TTCCTTGGAATCTTCTCAGA+AGG | 0.520487 | 4.1:-35782866 | MS.gene055641:CDS |
| AACAGTTGTGCTCCCAGGTG+GGG | 0.521764 | 4.1:-35782206 | MS.gene055641:CDS |
| ACCGGAATCACCGCAAGCAC+GGG | 0.521831 | 4.1:-35784211 | MS.gene055641:CDS |
| TTTGCTACTTTCAATATCTG+TGG | 0.528042 | 4.1:+35783326 | None:intergenic |
| CTTCCCCTCTGTAAATAACC+TGG | 0.528888 | 4.1:+35784137 | None:intergenic |
| ATTGGAGCCGTCTAGAACAA+TGG | 0.531711 | 4.1:-35784085 | MS.gene055641:CDS |
| TCTGCTCTGACATGTTTGCT+CGG | 0.532899 | 4.1:+35783813 | None:intergenic |
| GTCGTAAACCTTTCTACTCA+TGG | 0.533067 | 4.1:+35784325 | None:intergenic |
| TTCAGTAAAGCTCGGGCAAG+GGG | 0.537055 | 4.1:-35782365 | MS.gene055641:CDS |
| ATCATCCTCTTCTGTTCCAA+CGG | 0.537907 | 4.1:-35784003 | MS.gene055641:CDS |
| CTTCTTCTTAACCTCGCTGA+AGG | 0.538020 | 4.1:+35782540 | None:intergenic |
| GTCATTCTGGTAAAGATCAA+AGG | 0.539417 | 4.1:-35783968 | MS.gene055641:CDS |
| AAGTGAGAGCGACGAGTCAA+AGG | 0.539812 | 4.1:+35781825 | None:intergenic |
| GAATCAGAGCTCTACAACTG+CGG | 0.543042 | 4.1:-35783037 | MS.gene055641:CDS |
| AATCAGAGCTCTACAACTGC+GGG | 0.545300 | 4.1:-35783036 | MS.gene055641:CDS |
| GAAATGCGCAGTAGAGATGA+TGG | 0.546125 | 4.1:-35783654 | MS.gene055641:CDS |
| GGATCCAGTAACCTCCTCAA+AGG | 0.548190 | 4.1:+35782922 | None:intergenic |
| ATCCTATCAAAGAAGTGGAT+AGG | 0.550926 | 4.1:-35782786 | MS.gene055641:CDS |
| GTTCATAGTCTTCCTAGTAA+TGG | 0.552337 | 4.1:-35782184 | MS.gene055641:CDS |
| ATCTATCACCATGAGTAGAA+AGG | 0.553632 | 4.1:-35784333 | MS.gene055641:CDS |
| TATTGCTGTCAAAATACCTC+AGG | 0.554105 | 4.1:-35782296 | MS.gene055641:CDS |
| GCAGCCAAAGTGAAGAACTT+AGG | 0.554559 | 4.1:-35782607 | MS.gene055641:CDS |
| TCTACATCCTATCAAAGAAG+TGG | 0.555417 | 4.1:-35782791 | MS.gene055641:CDS |
| TTAGGCAAAAGATGAACAAA+CGG | 0.556183 | 4.1:+35783555 | None:intergenic |
| GATCCAGTAACCTCCTCAAA+GGG | 0.557184 | 4.1:+35782923 | None:intergenic |
| AGTAAAGCAAGCAGAAGCAA+AGG | 0.557312 | 4.1:-35782502 | MS.gene055641:CDS |
| TAAAACCGTCGATTCTTCAA+AGG | 0.557381 | 4.1:-35782737 | MS.gene055641:CDS |
| ATGCATCACATAGAAATAGC+AGG | 0.557569 | 4.1:-35784046 | MS.gene055641:CDS |
| AAAACCTCTAGAAGAAGTGT+TGG | 0.558273 | 4.1:-35783879 | MS.gene055641:CDS |
| GCAGACTGAAAGGTTGTGAC+AGG | 0.559523 | 4.1:-35783761 | MS.gene055641:CDS |
| AAACCTCTAGAAGAAGTGTT+GGG | 0.560014 | 4.1:-35783878 | MS.gene055641:CDS |
| CTTGATCCAGAAAGCTCACA+AGG | 0.561430 | 4.1:+35781757 | None:intergenic |
| AGAAGTGGATAGGGACCAAA+GGG | 0.561722 | 4.1:-35782776 | MS.gene055641:CDS |
| GCAACAGTTGTGCTCCCAGG+TGG | 0.563470 | 4.1:-35782208 | MS.gene055641:CDS |
| CATAGTCTTCCTAGTAATGG+TGG | 0.564884 | 4.1:-35782181 | MS.gene055641:CDS |
| TTTCATTTGAGCGACGGCAT+GGG | 0.565936 | 4.1:+35782465 | None:intergenic |
| GCAAGACAAGCCCTTTGAGG+AGG | 0.566425 | 4.1:-35782933 | MS.gene055641:CDS |
| CTCGACAATCACTATTCTGA+AGG | 0.566555 | 4.1:+35783526 | None:intergenic |
| CAGCAAATGTGAAAAGGGGC+AGG | 0.566642 | 4.1:+35782656 | None:intergenic |
| CGTGCAACAGTTGTGCTCCC+AGG | 0.567869 | 4.1:-35782211 | MS.gene055641:CDS |
| TTTCAGTAAAGCTCGGGCAA+GGG | 0.568763 | 4.1:-35782366 | MS.gene055641:CDS |
| TGGAGGCTCTACTTGTAAAG+AGG | 0.571920 | 4.1:-35783073 | MS.gene055641:CDS |
| GGTTTACGACGAGATAAAGT+CGG | 0.577429 | 4.1:-35784312 | MS.gene055641:CDS |
| AGAAGCTTTCATTTGAGCGA+CGG | 0.578403 | 4.1:+35782459 | None:intergenic |
| AGGTGAGAAAAGTATAGATA+CGG | 0.579925 | 4.1:+35782560 | None:intergenic |
| TATCACAATTCCCGTGCTTG+CGG | 0.582160 | 4.1:+35784201 | None:intergenic |
| TTTGCCAGGTTATTTACAGA+GGG | 0.583689 | 4.1:-35784141 | MS.gene055641:CDS |
| CATCCTAACAGCAGACTGAA+AGG | 0.584140 | 4.1:-35783771 | MS.gene055641:CDS |
| AAAGGGGTTAAGCTGAATGC+TGG | 0.586063 | 4.1:+35781871 | None:intergenic |
| CTCATCATTTGGCAGATAGT+CGG | 0.587388 | 4.1:+35782327 | None:intergenic |
| GCCAAAGTGAAGAACTTAGG+TGG | 0.587791 | 4.1:-35782604 | MS.gene055641:CDS |
| ATGCCCAACACTTCTTCTAG+AGG | 0.590537 | 4.1:+35783875 | None:intergenic |
| GCACAACTGTTGCACGAACA+AGG | 0.591466 | 4.1:+35782218 | None:intergenic |
| CAGCGCTCAAGAAGTGATGA+AGG | 0.591634 | 4.1:+35782157 | None:intergenic |
| ATCCTTCTGAGAAGATTCCA+AGG | 0.592898 | 4.1:+35782864 | None:intergenic |
| TGACCAGATAACCCATCCGT+TGG | 0.597031 | 4.1:+35783987 | None:intergenic |
| ACACATTCCATTCTCTAAAG+GGG | 0.604978 | 4.1:+35781855 | None:intergenic |
| CTTGAGCGCTGGAAATCGGG+TGG | 0.605137 | 4.1:-35782145 | MS.gene055641:CDS |
| CCCATCCGTTGGAACAGAAG+AGG | 0.606885 | 4.1:+35783998 | None:intergenic |
| TCTGACTGATAAAGGTGATG+AGG | 0.608271 | 4.1:+35783266 | None:intergenic |
| TACAGCCAAGCTCATCAGGA+AGG | 0.610945 | 4.1:+35783382 | None:intergenic |
| TAGTGAGTATGAAGATGAGC+TGG | 0.611521 | 4.1:-35784180 | MS.gene055641:CDS |
| ATCAGCATTGGCTATACAAG+TGG | 0.611983 | 4.1:-35783093 | MS.gene055641:CDS |
| AAGAAGTGGATAGGGACCAA+AGG | 0.612832 | 4.1:-35782777 | MS.gene055641:CDS |
| CCAAAGTGAAGAACTTAGGT+GGG | 0.614336 | 4.1:-35782603 | MS.gene055641:CDS |
| TTTGCTGTTGACCAAACTGA+CGG | 0.615529 | 4.1:-35782640 | MS.gene055641:CDS |
| TGTGTTGCCATTGTTCTAGA+CGG | 0.625168 | 4.1:+35784078 | None:intergenic |
| GAGCGACGAGTCAAAGGCTA+CGG | 0.631185 | 4.1:+35781831 | None:intergenic |
| AGCATTGGCTATACAAGTGG+AGG | 0.632340 | 4.1:-35783090 | MS.gene055641:CDS |
| TCCCAAGTCTAGAAAAGCCG+AGG | 0.633851 | 4.1:-35783229 | MS.gene055641:CDS |
| GCGCAGTAGAGATGATGGAA+AGG | 0.634780 | 4.1:-35783649 | MS.gene055641:CDS |
| CAAGGTCATGACTATCATTG+TGG | 0.637928 | 4.1:+35782236 | None:intergenic |
| ATTTGCCAGGTTATTTACAG+AGG | 0.640890 | 4.1:-35784142 | MS.gene055641:CDS |
| CTACCAACAGGAGAAACTGG+TGG | 0.646881 | 4.1:+35781622 | None:intergenic |
| ACGAAATGAGCAAATGCACA+AGG | 0.647231 | 4.1:-35783697 | MS.gene055641:CDS |
| CATTGAAGAAAAGAATCCAA+AGG | 0.649490 | 4.1:-35781728 | MS.gene055641:CDS |
| ATTTCAGGAAGTGATAAACC+TGG | 0.650189 | 4.1:-35782970 | MS.gene055641:CDS |
| ATCACCTTTATCAGTCAGAG+TGG | 0.650879 | 4.1:-35783262 | MS.gene055641:CDS |
| CCGTATATCAATAAGGAAAG+CGG | 0.653904 | 4.1:-35783726 | MS.gene055641:CDS |
| TCAACAGCAAATGTGAAAAG+GGG | 0.657402 | 4.1:+35782652 | None:intergenic |
| GTGGATAGGGACCAAAGGGT+CGG | 0.664351 | 4.1:-35782772 | MS.gene055641:CDS |
| TAGGATGGTTCACCGAAAGA+CGG | 0.671109 | 4.1:+35783787 | None:intergenic |
| TTTAACTGGACAGAATTGTG+TGG | 0.671542 | 4.1:-35782419 | MS.gene055641:CDS |
| TCTAATTCAGAAACTGTGAG+AGG | 0.675861 | 4.1:-35783009 | MS.gene055641:CDS |
| TTAACAAAACTGATAGCCTG+AGG | 0.686303 | 4.1:+35782280 | None:intergenic |
| GAAGACTATGAACCCCACCT+GGG | 0.692242 | 4.1:+35782194 | None:intergenic |
| GGTGGATCATGTGACTGCGG+TGG | 0.701828 | 4.1:-35782127 | MS.gene055641:CDS |
| TTGCCAGGTTATTTACAGAG+GGG | 0.708361 | 4.1:-35784140 | MS.gene055641:CDS |
| CGAGGAAATGAGACAAACTG+TGG | 0.712004 | 4.1:-35783211 | MS.gene055641:CDS |
| TCGGGTGGATCATGTGACTG+CGG | 0.731114 | 4.1:-35782130 | MS.gene055641:CDS |
| AGAAGCATGCTCCATCAACG+AGG | 0.738318 | 4.1:-35782711 | MS.gene055641:CDS |
| TTTACGACGAGATAAAGTCG+GGG | 0.761780 | 4.1:-35784310 | MS.gene055641:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTCAATAAATAAGAATTAT+AGG | - | chr4.1:35783151-35783170 | MS.gene055641:CDS | 15.0% |
| !!! | ACTTTTCAGAATTTATTTTT+TGG | + | chr4.1:35782843-35782862 | None:intergenic | 15.0% |
| !!! | ATTTTCATGTATCTCTTTTT+TGG | - | chr4.1:35784063-35784082 | MS.gene055641:CDS | 20.0% |
| ! | AAACAAAACAAACTCTTTCA+TGG | + | chr4.1:35783604-35783623 | None:intergenic | 25.0% |
| ! | ATAATCTGCAAAATAAGCTT+TGG | + | chr4.1:35783955-35783974 | None:intergenic | 25.0% |
| ! | CAAAAACTTCATCTGTAAAT+AGG | - | chr4.1:35782800-35782819 | MS.gene055641:CDS | 25.0% |
| ! | TCATGAAATTCACAAAAATG+AGG | - | chr4.1:35781733-35781752 | MS.gene055641:CDS | 25.0% |
| ! | TGCACAACATTATCAATATT+TGG | + | chr4.1:35782391-35782410 | None:intergenic | 25.0% |
| ! | TGTAATGATTCTCTGAATAA+AGG | - | chr4.1:35782625-35782644 | MS.gene055641:CDS | 25.0% |
| !! | TGAATTTGATCTTTTTGTTC+AGG | - | chr4.1:35783974-35783993 | MS.gene055641:CDS | 25.0% |
| !! | TTTTGTGAATTTCATGATGA+TGG | + | chr4.1:35781730-35781749 | None:intergenic | 25.0% |
| !!! | AGAGAGAAAGTTTTAAATGT+TGG | - | chr4.1:35781872-35781891 | MS.gene055641:CDS | 25.0% |
| !!! | TTATTTTTTGGTCTGATTCA+CGG | + | chr4.1:35782831-35782850 | None:intergenic | 25.0% |
| AACACATTCCATTCTCTAAA+GGG | + | chr4.1:35784137-35784156 | None:intergenic | 30.0% | |
| AAGAATTATAGGTCAGCTAA+TGG | - | chr4.1:35783162-35783181 | MS.gene055641:CDS | 30.0% | |
| AATTACGATATTTCGCATTC+AGG | - | chr4.1:35782580-35782599 | MS.gene055641:CDS | 30.0% | |
| AGAATTATAGGTCAGCTAAT+GGG | - | chr4.1:35783163-35783182 | MS.gene055641:CDS | 30.0% | |
| CATTGAAGAAAAGAATCCAA+AGG | - | chr4.1:35784260-35784279 | MS.gene055641:CDS | 30.0% | |
| GAAATTCACAAAAATGAGGA+AGG | - | chr4.1:35781737-35781756 | MS.gene055641:CDS | 30.0% | |
| GCTAAGAATGTTTGTATATG+AGG | + | chr4.1:35782490-35782509 | None:intergenic | 30.0% | |
| TATGCTAACTCAAACATTTC+AGG | - | chr4.1:35783003-35783022 | MS.gene055641:CDS | 30.0% | |
| TTAAGAAGAAGAATGGAAGT+TGG | - | chr4.1:35783460-35783479 | MS.gene055641:CDS | 30.0% | |
| TTAGGCAAAAGATGAACAAA+CGG | + | chr4.1:35782436-35782455 | None:intergenic | 30.0% | |
| ! | ACTTAAGGCATTTGGTAAAT+TGG | - | chr4.1:35784308-35784327 | MS.gene055641:CDS | 30.0% |
| ! | AGGTGAGAAAAGTATAGATA+CGG | + | chr4.1:35783431-35783450 | None:intergenic | 30.0% |
| ! | CTTTGGATTCTTTTCTTCAA+TGG | + | chr4.1:35784262-35784281 | None:intergenic | 30.0% |
| ! | TAAATGTTGGTGTTCTTGAT+TGG | - | chr4.1:35781885-35781904 | MS.gene055641:CDS | 30.0% |
| ! | TTTGGAACCGTATATCAATA+AGG | - | chr4.1:35782255-35782274 | MS.gene055641:CDS | 30.0% |
| !! | TTTGCTACTTTCAATATCTG+TGG | + | chr4.1:35782665-35782684 | None:intergenic | 30.0% |
| !!! | GTTTTGTTTTCAGTAAAGCT+CGG | - | chr4.1:35783615-35783634 | MS.gene055641:CDS | 30.0% |
| !!! | TTTTGTTTTCAGTAAAGCTC+GGG | - | chr4.1:35783616-35783635 | MS.gene055641:CDS | 30.0% |
| AGCTAAGTTCAGTAATTCCT+TGG | - | chr4.1:35783107-35783126 | MS.gene055641:CDS | 35.0% | |
| AGGTTGTGACAGGAAATATT+TGG | - | chr4.1:35782237-35782256 | MS.gene055641:CDS | 35.0% | |
| ATCCACTAATGCTATGCAAA+TGG | + | chr4.1:35784202-35784221 | None:intergenic | 35.0% | |
| ATCCTATCAAAGAAGTGGAT+AGG | - | chr4.1:35783202-35783221 | MS.gene055641:CDS | 35.0% | |
| ATCTATCACCATGAGTAGAA+AGG | - | chr4.1:35781655-35781674 | MS.gene055641:CDS | 35.0% | |
| ATGCATCACATAGAAATAGC+AGG | - | chr4.1:35781942-35781961 | MS.gene055641:intron | 35.0% | |
| ATTTCAGGAAGTGATAAACC+TGG | - | chr4.1:35783018-35783037 | MS.gene055641:CDS | 35.0% | |
| ATTTCCACTCTGACTGATAA+AGG | + | chr4.1:35782733-35782752 | None:intergenic | 35.0% | |
| ATTTGCCAGGTTATTTACAG+AGG | - | chr4.1:35781846-35781865 | MS.gene055641:CDS | 35.0% | |
| CCGCTTTCCTTATTGATATA+CGG | + | chr4.1:35782265-35782284 | None:intergenic | 35.0% | |
| CCGTATATCAATAAGGAAAG+CGG | - | chr4.1:35782262-35782281 | MS.gene055641:CDS | 35.0% | |
| CTGAGAATTTCTGTGAAGAA+TGG | - | chr4.1:35783309-35783328 | MS.gene055641:CDS | 35.0% | |
| CTGTAAATAACCTGGCAAAT+TGG | + | chr4.1:35781846-35781865 | None:intergenic | 35.0% | |
| GAACACATTCCATTCTCTAA+AGG | + | chr4.1:35784138-35784157 | None:intergenic | 35.0% | |
| GAATCCAAAGGAAACACTAT+TGG | - | chr4.1:35784272-35784291 | MS.gene055641:CDS | 35.0% | |
| GATTCTCTGAATAAAGGTTC+TGG | - | chr4.1:35782631-35782650 | MS.gene055641:CDS | 35.0% | |
| GTCAACAGCAAATGTGAAAA+GGG | + | chr4.1:35783340-35783359 | None:intergenic | 35.0% | |
| GTCATTCTGGTAAAGATCAA+AGG | - | chr4.1:35782020-35782039 | MS.gene055641:CDS | 35.0% | |
| GTTCATAGTCTTCCTAGTAA+TGG | - | chr4.1:35783804-35783823 | MS.gene055641:CDS | 35.0% | |
| TATTGCTGTCAAAATACCTC+AGG | - | chr4.1:35783692-35783711 | MS.gene055641:CDS | 35.0% | |
| TCAACAGCAAATGTGAAAAG+GGG | + | chr4.1:35783339-35783358 | None:intergenic | 35.0% | |
| TCCTATCAAAGAAGTGGATA+GGG | - | chr4.1:35783203-35783222 | MS.gene055641:CDS | 35.0% | |
| TCTAATTCAGAAACTGTGAG+AGG | - | chr4.1:35782979-35782998 | MS.gene055641:CDS | 35.0% | |
| TCTACATCCTATCAAAGAAG+TGG | - | chr4.1:35783197-35783216 | MS.gene055641:CDS | 35.0% | |
| TTAACAAAACTGATAGCCTG+AGG | + | chr4.1:35783711-35783730 | None:intergenic | 35.0% | |
| TTACTGAACTTAGCTGTCTT+TGG | + | chr4.1:35783102-35783121 | None:intergenic | 35.0% | |
| TTTAACTGGACAGAATTGTG+TGG | - | chr4.1:35783569-35783588 | MS.gene055641:CDS | 35.0% | |
| TTTCTACTCATGGTGATAGA+TGG | + | chr4.1:35781656-35781675 | None:intergenic | 35.0% | |
| TTTGCCAGGTTATTTACAGA+GGG | - | chr4.1:35781847-35781866 | MS.gene055641:CDS | 35.0% | |
| ! | AAAACCTCTAGAAGAAGTGT+TGG | - | chr4.1:35782109-35782128 | MS.gene055641:CDS | 35.0% |
| ! | ACACATTCCATTCTCTAAAG+GGG | + | chr4.1:35784136-35784155 | None:intergenic | 35.0% |
| ! | ACTGCAAAACTTAAGGCATT+TGG | - | chr4.1:35784300-35784319 | MS.gene055641:CDS | 35.0% |
| ! | CTATTCTGAAGGTTGTCTTT+AGG | + | chr4.1:35782454-35782473 | None:intergenic | 35.0% |
| ! | GCAGATCTGGAATAAAATTC+AGG | - | chr4.1:35781627-35781646 | MS.gene055641:CDS | 35.0% |
| ! | GGATAAGAAACATAACTTGC+AGG | + | chr4.1:35784348-35784367 | None:intergenic | 35.0% |
| ! | GTGACACTTCAAATTTTCAC+CGG | - | chr4.1:35781759-35781778 | MS.gene055641:CDS | 35.0% |
| ! | TAAGGCATTTGGTAAATTGG+AGG | - | chr4.1:35784311-35784330 | MS.gene055641:CDS | 35.0% |
| !! | AAACCTCTAGAAGAAGTGTT+GGG | - | chr4.1:35782110-35782129 | MS.gene055641:CDS | 35.0% |
| !! | AAATAAGCTTTGGACGATCT+TGG | + | chr4.1:35783945-35783964 | None:intergenic | 35.0% |
| !! | CAAGATTTTAGAGGTAGCAT+CGG | - | chr4.1:35782139-35782158 | MS.gene055641:CDS | 35.0% |
| !! | TAAAACCGTCGATTCTTCAA+AGG | - | chr4.1:35783251-35783270 | MS.gene055641:CDS | 35.0% |
| !!! | AAGAATCGACGGTTTTAACT+GGG | + | chr4.1:35783248-35783267 | None:intergenic | 35.0% |
| !!! | CTCTTTTTTGGATAACCACA+GGG | - | chr4.1:35784075-35784094 | MS.gene055641:CDS | 35.0% |
| !!! | TCTCTTTTTTGGATAACCAC+AGG | - | chr4.1:35784074-35784093 | MS.gene055641:CDS | 35.0% |
| !!! | TCTTTTTTGGATAACCACAG+GGG | - | chr4.1:35784076-35784095 | MS.gene055641:CDS | 35.0% |
| AAATCTTGTTCATTCCCCTG+TGG | + | chr4.1:35784093-35784112 | None:intergenic | 40.0% | |
| AAGTACATGTCCAATTTGCC+AGG | - | chr4.1:35781833-35781852 | MS.gene055641:CDS | 40.0% | |
| ACGAAATGAGCAAATGCACA+AGG | - | chr4.1:35782291-35782310 | MS.gene055641:CDS | 40.0% | |
| AGAAGCTTTCATTTGAGCGA+CGG | + | chr4.1:35783532-35783551 | None:intergenic | 40.0% | |
| AGCCAATGCTGATGCTTAAT+CGG | + | chr4.1:35782888-35782907 | None:intergenic | 40.0% | |
| AGCGAGGTTAAGAAGAAGAA+TGG | - | chr4.1:35783453-35783472 | MS.gene055641:CDS | 40.0% | |
| AGTAAAGCAAGCAGAAGCAA+AGG | - | chr4.1:35783486-35783505 | MS.gene055641:CDS | 40.0% | |
| AGTGATAAACCTGGTGATAC+AGG | - | chr4.1:35783027-35783046 | MS.gene055641:CDS | 40.0% | |
| ATAGCAGCAAGCTCATCATT+TGG | + | chr4.1:35783675-35783694 | None:intergenic | 40.0% | |
| ATCACCTTTATCAGTCAGAG+TGG | - | chr4.1:35782726-35782745 | MS.gene055641:CDS | 40.0% | |
| ATCATCCTCTTCTGTTCCAA+CGG | - | chr4.1:35781985-35782004 | MS.gene055641:intron | 40.0% | |
| CAAGAATGTTTCCGTCAGTT+TGG | + | chr4.1:35783362-35783381 | None:intergenic | 40.0% | |
| CAAGGTCATGACTATCATTG+TGG | + | chr4.1:35783755-35783774 | None:intergenic | 40.0% | |
| CACAGTTTGTCTCATTTCCT+CGG | + | chr4.1:35782779-35782798 | None:intergenic | 40.0% | |
| CATAGTCTTCCTAGTAATGG+TGG | - | chr4.1:35783807-35783826 | MS.gene055641:CDS | 40.0% | |
| CCAAAGTGAAGAACTTAGGT+GGG | - | chr4.1:35783385-35783404 | MS.gene055641:CDS | 40.0% | |
| CTCATCATTTGGCAGATAGT+CGG | + | chr4.1:35783664-35783683 | None:intergenic | 40.0% | |
| CTCGACAATCACTATTCTGA+AGG | + | chr4.1:35782465-35782484 | None:intergenic | 40.0% | |
| CTCTACTTGTAAAGAGGATG+AGG | - | chr4.1:35782921-35782940 | MS.gene055641:CDS | 40.0% | |
| GGTCAACAGCAAATGTGAAA+AGG | + | chr4.1:35783341-35783360 | None:intergenic | 40.0% | |
| GGTGATGAGGAAGTAGATAT+TGG | + | chr4.1:35782712-35782731 | None:intergenic | 40.0% | |
| GGTGCAAACTGCAAAACTTA+AGG | - | chr4.1:35784293-35784312 | MS.gene055641:CDS | 40.0% | |
| GGTTTACGACGAGATAAAGT+CGG | - | chr4.1:35781676-35781695 | MS.gene055641:CDS | 40.0% | |
| GTCGTAAACCTTTCTACTCA+TGG | + | chr4.1:35781666-35781685 | None:intergenic | 40.0% | |
| GTTTACGACGAGATAAAGTC+GGG | - | chr4.1:35781677-35781696 | MS.gene055641:CDS | 40.0% | |
| TAGTGAGTATGAAGATGAGC+TGG | - | chr4.1:35781808-35781827 | MS.gene055641:CDS | 40.0% | |
| TCCCTATCCACTTCTTTGAT+AGG | + | chr4.1:35783207-35783226 | None:intergenic | 40.0% | |
| TCGCACTGTTTGGATTTAAC+TGG | - | chr4.1:35783555-35783574 | MS.gene055641:CDS | 40.0% | |
| TCTGACTGATAAAGGTGATG+AGG | + | chr4.1:35782725-35782744 | None:intergenic | 40.0% | |
| TCTTTCTGACAGAGTTCCTT+AGG | + | chr4.1:35782556-35782575 | None:intergenic | 40.0% | |
| TGCACCAATAGTGTTTCCTT+TGG | + | chr4.1:35784279-35784298 | None:intergenic | 40.0% | |
| TTCCTTGGAATCTTCTCAGA+AGG | - | chr4.1:35783122-35783141 | MS.gene055641:CDS | 40.0% | |
| TTGCCAGGTTATTTACAGAG+GGG | - | chr4.1:35781848-35781867 | MS.gene055641:CDS | 40.0% | |
| TTTACGACGAGATAAAGTCG+GGG | - | chr4.1:35781678-35781697 | MS.gene055641:CDS | 40.0% | |
| ! | AGCTTAACCCCTTTAGAGAA+TGG | - | chr4.1:35784126-35784145 | MS.gene055641:CDS | 40.0% |
| ! | ATCCTTCTGAGAAGATTCCA+AGG | + | chr4.1:35783127-35783146 | None:intergenic | 40.0% |
| ! | CTTGTCCTTTGAAGAATCGA+CGG | + | chr4.1:35783259-35783278 | None:intergenic | 40.0% |
| ! | TGTGTTGCCATTGTTCTAGA+CGG | + | chr4.1:35781913-35781932 | None:intergenic | 40.0% |
| !! | ATCAGCATTGGCTATACAAG+TGG | - | chr4.1:35782895-35782914 | MS.gene055641:CDS | 40.0% |
| !! | GAAGAATCGACGGTTTTAAC+TGG | + | chr4.1:35783249-35783268 | None:intergenic | 40.0% |
| !! | TGATGATGGTCAGCAACATA+TGG | + | chr4.1:35781716-35781735 | None:intergenic | 40.0% |
| !! | TTTGCTGTTGACCAAACTGA+CGG | - | chr4.1:35783348-35783367 | MS.gene055641:CDS | 40.0% |
| AAAGGGGTTAAGCTGAATGC+TGG | + | chr4.1:35784120-35784139 | None:intergenic | 45.0% | |
| AAGAAGTGGATAGGGACCAA+AGG | - | chr4.1:35783211-35783230 | MS.gene055641:CDS | 45.0% | |
| AAGATGCCTTGTGAGCTTTC+TGG | - | chr4.1:35784225-35784244 | MS.gene055641:CDS | 45.0% | |
| AATCAGAGCTCTACAACTGC+GGG | - | chr4.1:35782952-35782971 | MS.gene055641:CDS | 45.0% | |
| ACGGCATGGGAAACATAATC+AGG | + | chr4.1:35783513-35783532 | None:intergenic | 45.0% | |
| ACTCTACCAACAGGAGAAAC+TGG | + | chr4.1:35784372-35784391 | None:intergenic | 45.0% | |
| AGAAGTGGATAGGGACCAAA+GGG | - | chr4.1:35783212-35783231 | MS.gene055641:CDS | 45.0% | |
| ATGCCCAACACTTCTTCTAG+AGG | + | chr4.1:35782116-35782135 | None:intergenic | 45.0% | |
| CAACCTTTCAGTCTGCTGTT+AGG | + | chr4.1:35782223-35782242 | None:intergenic | 45.0% | |
| CATCCTAACAGCAGACTGAA+AGG | - | chr4.1:35782217-35782236 | MS.gene055641:CDS | 45.0% | |
| CCCACCTAAGTTCTTCACTT+TGG | + | chr4.1:35783388-35783407 | None:intergenic | 45.0% | |
| CGAGGAAATGAGACAAACTG+TGG | - | chr4.1:35782777-35782796 | MS.gene055641:CDS | 45.0% | |
| CGCCATTTGCATAGCATTAG+TGG | - | chr4.1:35784197-35784216 | MS.gene055641:CDS | 45.0% | |
| CTGATGCTTAATCGGCGAAA+AGG | + | chr4.1:35782880-35782899 | None:intergenic | 45.0% | |
| CTTCCCCTCTGTAAATAACC+TGG | + | chr4.1:35781854-35781873 | None:intergenic | 45.0% | |
| CTTCTTCTTAACCTCGCTGA+AGG | + | chr4.1:35783451-35783470 | None:intergenic | 45.0% | |
| CTTGATCCAGAAAGCTCACA+AGG | + | chr4.1:35784234-35784253 | None:intergenic | 45.0% | |
| CTTTCAGTCTGCTGTTAGGA+TGG | + | chr4.1:35782219-35782238 | None:intergenic | 45.0% | |
| GAAATGCGCAGTAGAGATGA+TGG | - | chr4.1:35782334-35782353 | MS.gene055641:CDS | 45.0% | |
| GAATCAGAGCTCTACAACTG+CGG | - | chr4.1:35782951-35782970 | MS.gene055641:CDS | 45.0% | |
| GATCCAGTAACCTCCTCAAA+GGG | + | chr4.1:35783068-35783087 | None:intergenic | 45.0% | |
| GATGAAGGTCCACCATTACT+AGG | + | chr4.1:35783819-35783838 | None:intergenic | 45.0% | |
| GCAGCCAAAGTGAAGAACTT+AGG | - | chr4.1:35783381-35783400 | MS.gene055641:CDS | 45.0% | |
| GCCAAAGTGAAGAACTTAGG+TGG | - | chr4.1:35783384-35783403 | MS.gene055641:CDS | 45.0% | |
| TAGGATGGTTCACCGAAAGA+CGG | + | chr4.1:35782204-35782223 | None:intergenic | 45.0% | |
| TATCACAATTCCCGTGCTTG+CGG | + | chr4.1:35781790-35781809 | None:intergenic | 45.0% | |
| TATCCACCAGTTTCTCCTGT+TGG | - | chr4.1:35784363-35784382 | MS.gene055641:CDS | 45.0% | |
| TCATTACAGCCAAGCTCATC+AGG | + | chr4.1:35782613-35782632 | None:intergenic | 45.0% | |
| TCTGCTCTGACATGTTTGCT+CGG | + | chr4.1:35782178-35782197 | None:intergenic | 45.0% | |
| TGGAGGCTCTACTTGTAAAG+AGG | - | chr4.1:35782915-35782934 | MS.gene055641:CDS | 45.0% | |
| TTTCAGTAAAGCTCGGGCAA+GGG | - | chr4.1:35783622-35783641 | MS.gene055641:CDS | 45.0% | |
| TTTCATTTGAGCGACGGCAT+GGG | + | chr4.1:35783526-35783545 | None:intergenic | 45.0% | |
| ! | AGCTTCTGATTCGCACTGTT+TGG | - | chr4.1:35783545-35783564 | MS.gene055641:CDS | 45.0% |
| ! | ATTGGAGCCGTCTAGAACAA+TGG | - | chr4.1:35781903-35781922 | MS.gene055641:intron | 45.0% |
| ! | CAGTTGTAGAGCTCTGATTC+GGG | + | chr4.1:35782951-35782970 | None:intergenic | 45.0% |
| ! | GAGCTTTTCAGAACAGCCTA+AGG | - | chr4.1:35782537-35782556 | MS.gene055641:CDS | 45.0% |
| ! | GCAGTTGTAGAGCTCTGATT+CGG | + | chr4.1:35782952-35782971 | None:intergenic | 45.0% |
| ! | GCTGTCTTTGGTTTCAGCAA+TGG | + | chr4.1:35783090-35783109 | None:intergenic | 45.0% |
| ! | GTGAAGAACTTAGGTGGGTT+AGG | - | chr4.1:35783390-35783409 | MS.gene055641:CDS | 45.0% |
| ! | TACTTTTCTCACCTTCAGCG+AGG | - | chr4.1:35783437-35783456 | MS.gene055641:CDS | 45.0% |
| ! | TCCTCGGCTTTTCTAGACTT+GGG | + | chr4.1:35782763-35782782 | None:intergenic | 45.0% |
| ! | TCTCCTGTTGGTAGAGTCTA+AGG | - | chr4.1:35784375-35784394 | MS.gene055641:CDS | 45.0% |
| ! | TTCCTCGGCTTTTCTAGACT+TGG | + | chr4.1:35782764-35782783 | None:intergenic | 45.0% |
| ! | TTTTCAGTAAAGCTCGGGCA+AGG | - | chr4.1:35783621-35783640 | MS.gene055641:CDS | 45.0% |
| ! | TTTTGGTCTGATTCACGGAG+AGG | + | chr4.1:35782826-35782845 | None:intergenic | 45.0% |
| !! | ACTTCTTGAGCGCTGGAAAT+CGG | - | chr4.1:35783839-35783858 | MS.gene055641:CDS | 45.0% |
| !! | AGCATTGGCTATACAAGTGG+AGG | - | chr4.1:35782898-35782917 | MS.gene055641:CDS | 45.0% |
| !! | GATGGGTTATCTGGTCATTC+TGG | - | chr4.1:35782007-35782026 | MS.gene055641:intron | 45.0% |
| !! | GGGCATCGTCAAGATTTTAG+AGG | - | chr4.1:35782130-35782149 | MS.gene055641:CDS | 45.0% |
| AAGTGAGAGCGACGAGTCAA+AGG | + | chr4.1:35784166-35784185 | None:intergenic | 50.0% | |
| AGAAGAGCTTGCCTCGTTGA+TGG | + | chr4.1:35783291-35783310 | None:intergenic | 50.0% | |
| ATCATGTGACTGCGGTGGTT+GGG | - | chr4.1:35783866-35783885 | MS.gene055641:CDS | 50.0% | |
| CAGAGCAGATGACCGTCTTT+CGG | - | chr4.1:35782189-35782208 | MS.gene055641:CDS | 50.0% | |
| CAGCAAATGTGAAAAGGGGC+AGG | + | chr4.1:35783335-35783354 | None:intergenic | 50.0% | |
| CAGCGCTCAAGAAGTGATGA+AGG | + | chr4.1:35783834-35783853 | None:intergenic | 50.0% | |
| CCTCTTCTGTTCCAACGGAT+GGG | - | chr4.1:35781990-35782009 | MS.gene055641:intron | 50.0% | |
| CTACCAACAGGAGAAACTGG+TGG | + | chr4.1:35784369-35784388 | None:intergenic | 50.0% | |
| CTTCATCACTTCTTGAGCGC+TGG | - | chr4.1:35783832-35783851 | MS.gene055641:CDS | 50.0% | |
| CTTTCATTTGAGCGACGGCA+TGG | + | chr4.1:35783527-35783546 | None:intergenic | 50.0% | |
| GAAGACTATGAACCCCACCT+GGG | + | chr4.1:35783797-35783816 | None:intergenic | 50.0% | |
| GAAGCAAGACAAGCCCTTTG+AGG | - | chr4.1:35783052-35783071 | MS.gene055641:CDS | 50.0% | |
| GCACAACTGTTGCACGAACA+AGG | + | chr4.1:35783773-35783792 | None:intergenic | 50.0% | |
| GCAGACTGAAAGGTTGTGAC+AGG | - | chr4.1:35782227-35782246 | MS.gene055641:CDS | 50.0% | |
| GGATCCAGTAACCTCCTCAA+AGG | + | chr4.1:35783069-35783088 | None:intergenic | 50.0% | |
| TACAGCCAAGCTCATCAGGA+AGG | + | chr4.1:35782609-35782628 | None:intergenic | 50.0% | |
| TCCCAAGTCTAGAAAAGCCG+AGG | - | chr4.1:35782759-35782778 | MS.gene055641:CDS | 50.0% | |
| TCCTCTTCTGTTCCAACGGA+TGG | - | chr4.1:35781989-35782008 | MS.gene055641:intron | 50.0% | |
| TGACCAGATAACCCATCCGT+TGG | + | chr4.1:35782004-35782023 | None:intergenic | 50.0% | |
| TTCAGTAAAGCTCGGGCAAG+GGG | - | chr4.1:35783623-35783642 | MS.gene055641:CDS | 50.0% | |
| TTGCTTCTGCCTGTATCACC+AGG | + | chr4.1:35783039-35783058 | None:intergenic | 50.0% | |
| ! | AAGCCCTTTGAGGAGGTTAC+TGG | - | chr4.1:35783062-35783081 | MS.gene055641:CDS | 50.0% |
| ! | AGAAGCATGCTCCATCAACG+AGG | - | chr4.1:35783277-35783296 | MS.gene055641:CDS | 50.0% |
| ! | CGCCGATTAAGCATCAGCAT+TGG | - | chr4.1:35782883-35782902 | MS.gene055641:CDS | 50.0% |
| ! | TCGGCTTTTCTAGACTTGGG+AGG | + | chr4.1:35782760-35782779 | None:intergenic | 50.0% |
| !! | CTTCTTGAGCGCTGGAAATC+GGG | - | chr4.1:35783840-35783859 | MS.gene055641:CDS | 50.0% |
| !! | GCGCAGTAGAGATGATGGAA+AGG | - | chr4.1:35782339-35782358 | MS.gene055641:CDS | 50.0% |
| !! | GTTCCAACGGATGGGTTATC+TGG | - | chr4.1:35781998-35782017 | MS.gene055641:intron | 50.0% |
| AACAGTTGTGCTCCCAGGTG+GGG | - | chr4.1:35783782-35783801 | MS.gene055641:CDS | 55.0% | |
| CAACAGTTGTGCTCCCAGGT+GGG | - | chr4.1:35783781-35783800 | MS.gene055641:CDS | 55.0% | |
| CCCATCCGTTGGAACAGAAG+AGG | + | chr4.1:35781993-35782012 | None:intergenic | 55.0% | |
| GAGCGACGAGTCAAAGGCTA+CGG | + | chr4.1:35784160-35784179 | None:intergenic | 55.0% | |
| GATCATGTGACTGCGGTGGT+TGG | - | chr4.1:35783865-35783884 | MS.gene055641:CDS | 55.0% | |
| GGAAGACTATGAACCCCACC+TGG | + | chr4.1:35783798-35783817 | None:intergenic | 55.0% | |
| GGTAGCCTTCCTGATGAGCT+TGG | - | chr4.1:35782601-35782620 | MS.gene055641:CDS | 55.0% | |
| GTGGATAGGGACCAAAGGGT+CGG | - | chr4.1:35783216-35783235 | MS.gene055641:CDS | 55.0% | |
| TCGGGTGGATCATGTGACTG+CGG | - | chr4.1:35783858-35783877 | MS.gene055641:CDS | 55.0% | |
| TGACTGCGGTGGTTGGGATT+TGG | - | chr4.1:35783872-35783891 | MS.gene055641:CDS | 55.0% | |
| ! | GCAAGACAAGCCCTTTGAGG+AGG | - | chr4.1:35783055-35783074 | MS.gene055641:CDS | 55.0% |
| ACCGGAATCACCGCAAGCAC+GGG | - | chr4.1:35781777-35781796 | MS.gene055641:CDS | 60.0% | |
| CACCGGAATCACCGCAAGCA+CGG | - | chr4.1:35781776-35781795 | MS.gene055641:CDS | 60.0% | |
| CGTGCAACAGTTGTGCTCCC+AGG | - | chr4.1:35783777-35783796 | MS.gene055641:CDS | 60.0% | |
| CTGGGCTACAACCGACCCTT+TGG | + | chr4.1:35783230-35783249 | None:intergenic | 60.0% | |
| GCAACAGTTGTGCTCCCAGG+TGG | - | chr4.1:35783780-35783799 | MS.gene055641:CDS | 60.0% | |
| GGTGGATCATGTGACTGCGG+TGG | - | chr4.1:35783861-35783880 | MS.gene055641:CDS | 60.0% | |
| TCCCGTGCTTGCGGTGATTC+CGG | + | chr4.1:35781781-35781800 | None:intergenic | 60.0% | |
| !! | CTTGAGCGCTGGAAATCGGG+TGG | - | chr4.1:35783843-35783862 | MS.gene055641:CDS | 60.0% |
| CGGGCAAGGGGATGCGAGTC+AGG | - | chr4.1:35783635-35783654 | MS.gene055641:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 35781615 | 35784395 | 35781615 | ID=MS.gene055641 |
| chr4.1 | mRNA | 35781615 | 35784395 | 35781615 | ID=MS.gene055641.t1;Parent=MS.gene055641 |
| chr4.1 | exon | 35782015 | 35784395 | 35782015 | ID=MS.gene055641.t1.exon1;Parent=MS.gene055641.t1 |
| chr4.1 | CDS | 35782015 | 35784395 | 35782015 | ID=cds.MS.gene055641.t1;Parent=MS.gene055641.t1 |
| chr4.1 | exon | 35781615 | 35781914 | 35781615 | ID=MS.gene055641.t1.exon2;Parent=MS.gene055641.t1 |
| chr4.1 | CDS | 35781615 | 35781914 | 35781615 | ID=cds.MS.gene055641.t1;Parent=MS.gene055641.t1 |
| Gene Sequence |
| Protein sequence |
