Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055706.t1 | XP_003624879.1 | 81.8 | 247 | 32 | 3 | 3 | 249 | 2 | 235 | 1.80E-79 | 305.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055706.t1 | O80683 | 38.9 | 162 | 77 | 7 | 97 | 249 | 90 | 238 | 5.6e-13 | 76.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055706.t1 | G7L4T3 | 81.8 | 247 | 32 | 3 | 3 | 249 | 2 | 235 | 1.3e-79 | 305.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055706 | MS.gene41898 | 0.874219 | 8.01E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055706.t1 | MTR_7g088620 | 89.069 | 247 | 14 | 3 | 3 | 249 | 2 | 235 | 1.56e-124 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055706.t1 | AT3G56880 | 40.304 | 263 | 109 | 13 | 10 | 249 | 8 | 245 | 1.25e-37 | 132 |
| MS.gene055706.t1 | AT2G41010 | 38.800 | 250 | 124 | 14 | 10 | 249 | 8 | 238 | 2.20e-36 | 129 |
Find 84 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAAGATGCTGCTGGTTT+TGG | 0.281911 | 7.4:+19902437 | MS.gene055706:CDS |
| TTCCCACTCTTGAATCTTCA+TGG | 0.285857 | 7.4:+19902498 | MS.gene055706:CDS |
| CATAGGGCGGTGGGAGTTAC+CGG | 0.299200 | 7.4:+19902254 | MS.gene055706:CDS |
| CATTTCAGACCCATCAGAAT+TGG | 0.339724 | 7.4:-19902378 | None:intergenic |
| TGGTGAAACCGGAGCCTCAT+AGG | 0.350138 | 7.4:+19902237 | MS.gene055706:CDS |
| CAGATGGTGCAGCAGGTTAC+TGG | 0.357216 | 7.4:+19902173 | MS.gene055706:CDS |
| TGGGTCTGAAATGACTGGGC+TGG | 0.364136 | 7.4:+19902388 | MS.gene055706:CDS |
| GGGCTGGGCCCACTTTCTTT+CGG | 0.373567 | 7.4:+19902404 | MS.gene055706:CDS |
| AACCCACCATTGTTTGTTGC+TGG | 0.374638 | 7.4:-19902355 | None:intergenic |
| CAGGTTACTGGTGTGAGATT+TGG | 0.376680 | 7.4:+19902185 | MS.gene055706:CDS |
| TGGAGTGGCGGTGGCGGTGG+TGG | 0.382600 | 7.4:-19902009 | None:intergenic |
| GCGGCAACACGTTGACGCTT+TGG | 0.391062 | 7.4:-19902068 | None:intergenic |
| GCGGTGGGAGTTACCGGAGG+AGG | 0.393335 | 7.4:+19902260 | MS.gene055706:CDS |
| AATGGCGCCGTTGGTGAAAC+CGG | 0.399142 | 7.4:+19902226 | MS.gene055706:CDS |
| GGGTCTGAAATGACTGGGCT+GGG | 0.402329 | 7.4:+19902389 | MS.gene055706:CDS |
| TGTTGGAGTGGCGGTGGCGG+TGG | 0.402404 | 7.4:-19902012 | None:intergenic |
| ATTTGTGAAGAGCTTTGGTT+AGG | 0.408283 | 7.4:-19901890 | None:intergenic |
| CTTTCTTTCGGCCAGCCCAT+TGG | 0.411983 | 7.4:+19902416 | MS.gene055706:CDS |
| GAGTGATTTGTGAAGAGCTT+TGG | 0.414461 | 7.4:-19901895 | None:intergenic |
| CCAACAGTTTCTAGTCTCTC+TGG | 0.416676 | 7.4:+19902029 | MS.gene055706:CDS |
| CCATTGTTTGTTGCTGGTGG+TGG | 0.431197 | 7.4:-19902349 | None:intergenic |
| GGCGGTGGTGGTGACGGTGG+TGG | 0.433782 | 7.4:-19901997 | None:intergenic |
| GGCGGTGGCGGTGGTGGTGA+CGG | 0.437049 | 7.4:-19902003 | None:intergenic |
| GGTGGTGGTGACGGTGGTGG+TGG | 0.455555 | 7.4:-19901994 | None:intergenic |
| AACTGTTGGAGTGGCGGTGG+CGG | 0.456588 | 7.4:-19902015 | None:intergenic |
| TGCGGGGTCGAATGTTTCAA+TGG | 0.461047 | 7.4:+19902208 | MS.gene055706:CDS |
| TTGTTTGTTGCTGGTGGTGG+TGG | 0.462466 | 7.4:-19902346 | None:intergenic |
| ACCATCTGCCGAAAATTCGC+TGG | 0.464310 | 7.4:-19902158 | None:intergenic |
| ACTGGTGTGAGATTTGGTGC+GGG | 0.482366 | 7.4:+19902191 | MS.gene055706:CDS |
| GGGAGGTTTACGACTGGTGG+AGG | 0.484019 | 7.4:+19902281 | MS.gene055706:CDS |
| TTTGTGAAGAGCTTTGGTTA+GGG | 0.489514 | 7.4:-19901889 | None:intergenic |
| AAGCGTCAACGTGTTGCCGC+TGG | 0.489741 | 7.4:+19902071 | MS.gene055706:CDS |
| GGTGGCGGTGGTGGTGACGG+TGG | 0.493309 | 7.4:-19902000 | None:intergenic |
| ACCGGAGCCTCATAGGGCGG+TGG | 0.497891 | 7.4:+19902244 | MS.gene055706:CDS |
| GTAACTCCCACCGCCCTATG+AGG | 0.503102 | 7.4:-19902251 | None:intergenic |
| CCCACCGCCCTATGAGGCTC+CGG | 0.503136 | 7.4:-19902245 | None:intergenic |
| ATGGGCTGGCCGAAAGAAAG+TGG | 0.506747 | 7.4:-19902413 | None:intergenic |
| TCTGATGGGTCTGAAATGAC+TGG | 0.508381 | 7.4:+19902383 | MS.gene055706:CDS |
| TTCCATGAAGATTCAAGAGT+GGG | 0.509563 | 7.4:-19902500 | None:intergenic |
| CAGCATCTTCACCAATGGGC+TGG | 0.511191 | 7.4:-19902427 | None:intergenic |
| AAGGGTGAAAGAGCGTCTTC+CGG | 0.514633 | 7.4:-19901936 | None:intergenic |
| GGTGAAACCGGAGCCTCATA+GGG | 0.519006 | 7.4:+19902238 | MS.gene055706:CDS |
| GACGGTGGTGGTGGTTGTAG+TGG | 0.519254 | 7.4:-19901985 | None:intergenic |
| CCACCATTGTTTGTTGCTGG+TGG | 0.519482 | 7.4:-19902352 | None:intergenic |
| GGTGGTTGTAGTGGCGGAGT+CGG | 0.521828 | 7.4:-19901976 | None:intergenic |
| AGTCGTAAACCTCCCTCCTC+CGG | 0.523654 | 7.4:-19902273 | None:intergenic |
| TAGCAGCTAGCATTGAATCA+TGG | 0.527048 | 7.4:+19901805 | MS.gene055706:CDS |
| AGTCGTCTGCGAACGCTTCG+AGG | 0.529472 | 7.4:-19902120 | None:intergenic |
| AGCCACGTGTCAGTCATAGC+TGG | 0.533397 | 7.4:-19901837 | None:intergenic |
| GAATGTTTCAATGGCGCCGT+TGG | 0.536252 | 7.4:+19902217 | MS.gene055706:CDS |
| ATGGTGGGTTCCAATTCTGA+TGG | 0.537849 | 7.4:+19902368 | MS.gene055706:CDS |
| CCAGCAGCATCTTCACCAAT+GGG | 0.539442 | 7.4:-19902431 | None:intergenic |
| ACCAGCAGCATCTTCACCAA+TGG | 0.540992 | 7.4:-19902432 | None:intergenic |
| CGGTGGGAGTTACCGGAGGA+GGG | 0.551350 | 7.4:+19902261 | MS.gene055706:CDS |
| GGAGGGAGGTTTACGACTGG+TGG | 0.551574 | 7.4:+19902278 | MS.gene055706:CDS |
| CCAGAGAGACTAGAAACTGT+TGG | 0.552016 | 7.4:-19902029 | None:intergenic |
| AGAAACTGTTGGAGTGGCGG+TGG | 0.553298 | 7.4:-19902018 | None:intergenic |
| TGAGGCTCCGGTTTCACCAA+CGG | 0.555287 | 7.4:-19902233 | None:intergenic |
| CCCATTGGTGAAGATGCTGC+TGG | 0.556039 | 7.4:+19902431 | MS.gene055706:CDS |
| CCGGAGCCTCATAGGGCGGT+GGG | 0.556410 | 7.4:+19902245 | MS.gene055706:CDS |
| TACTGGTGTGAGATTTGGTG+CGG | 0.557781 | 7.4:+19902190 | MS.gene055706:CDS |
| TGGGAGTTACCGGAGGAGGG+AGG | 0.580699 | 7.4:+19902264 | MS.gene055706:CDS |
| CCATCTGCCGAAAATTCGCT+GGG | 0.582757 | 7.4:-19902157 | None:intergenic |
| AAAGCTGACGTGTCAAGCGT+CGG | 0.583097 | 7.4:-19902311 | None:intergenic |
| CTGATGGGTCTGAAATGACT+GGG | 0.588568 | 7.4:+19902384 | MS.gene055706:CDS |
| GGTGGTGGTGGTTGTAGTGG+CGG | 0.596888 | 7.4:-19901982 | None:intergenic |
| CACCAGCAACAAACAATGGT+GGG | 0.598701 | 7.4:+19902353 | MS.gene055706:CDS |
| AACACGTTGACGCTTTGGAG+CGG | 0.606224 | 7.4:-19902063 | None:intergenic |
| TGGTGGGTTCCAATTCTGAT+GGG | 0.610091 | 7.4:+19902369 | MS.gene055706:CDS |
| ACTAGAAACTGTTGGAGTGG+CGG | 0.612468 | 7.4:-19902021 | None:intergenic |
| TTTCCATGAAGATTCAAGAG+TGG | 0.617020 | 7.4:-19902501 | None:intergenic |
| CCACCAGCAACAAACAATGG+TGG | 0.621899 | 7.4:+19902352 | MS.gene055706:CDS |
| CCACCACCAGCAACAAACAA+TGG | 0.623775 | 7.4:+19902349 | MS.gene055706:CDS |
| TTCGCAGACGACTTTCATCA+CGG | 0.630006 | 7.4:+19902130 | MS.gene055706:CDS |
| TGGGCTGGCCGAAAGAAAGT+GGG | 0.631627 | 7.4:-19902412 | None:intergenic |
| GAGACTAGAAACTGTTGGAG+TGG | 0.634144 | 7.4:-19902024 | None:intergenic |
| GGAGGTTTACGACTGGTGGA+GGG | 0.639970 | 7.4:+19902282 | MS.gene055706:CDS |
| AGGGCGGTGGGAGTTACCGG+AGG | 0.649949 | 7.4:+19902257 | MS.gene055706:CDS |
| CTGGTGTGAGATTTGGTGCG+GGG | 0.663099 | 7.4:+19902192 | MS.gene055706:CDS |
| GAAACCGGAGCCTCATAGGG+CGG | 0.665818 | 7.4:+19902241 | MS.gene055706:CDS |
| GGAGGAGGGAGGTTTACGAC+TGG | 0.687368 | 7.4:+19902275 | MS.gene055706:CDS |
| ACGTGTCAGTCATAGCTGGA+CGG | 0.705419 | 7.4:-19901833 | None:intergenic |
| GTCCAGCTATGACTGACACG+TGG | 0.771552 | 7.4:+19901835 | MS.gene055706:CDS |
| GCAGACGACTTTCATCACGG+CGG | 0.847591 | 7.4:+19902133 | MS.gene055706:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTGATGAGATTTAAAAA+GGG | - | chr7.4:19901957-19901976 | None:intergenic | 20.0% |
| !!! | GGTTTTGATGAGATTTAAAA+AGG | - | chr7.4:19901958-19901977 | None:intergenic | 25.0% |
| TTCCATGAAGATTCAAGAGT+GGG | - | chr7.4:19902503-19902522 | None:intergenic | 35.0% | |
| TTTCCATGAAGATTCAAGAG+TGG | - | chr7.4:19902504-19902523 | None:intergenic | 35.0% | |
| ! | ATTTGTGAAGAGCTTTGGTT+AGG | - | chr7.4:19901893-19901912 | None:intergenic | 35.0% |
| ! | TTTGTGAAGAGCTTTGGTTA+GGG | - | chr7.4:19901892-19901911 | None:intergenic | 35.0% |
| CATTTCAGACCCATCAGAAT+TGG | - | chr7.4:19902381-19902400 | None:intergenic | 40.0% | |
| CTCTTCTTCTTCTTCTTCAC+CGG | + | chr7.4:19901917-19901936 | MS.gene055706:CDS | 40.0% | |
| TTCCCACTCTTGAATCTTCA+TGG | + | chr7.4:19902498-19902517 | MS.gene055706:CDS | 40.0% | |
| ! | GAGTGATTTGTGAAGAGCTT+TGG | - | chr7.4:19901898-19901917 | None:intergenic | 40.0% |
| ! | TAGCAGCTAGCATTGAATCA+TGG | + | chr7.4:19901805-19901824 | MS.gene055706:CDS | 40.0% |
| ACTAGAAACTGTTGGAGTGG+CGG | - | chr7.4:19902024-19902043 | None:intergenic | 45.0% | |
| CACCAGCAACAAACAATGGT+GGG | + | chr7.4:19902353-19902372 | MS.gene055706:CDS | 45.0% | |
| CAGGTTACTGGTGTGAGATT+TGG | + | chr7.4:19902185-19902204 | MS.gene055706:CDS | 45.0% | |
| CCAGAGAGACTAGAAACTGT+TGG | - | chr7.4:19902032-19902051 | None:intergenic | 45.0% | |
| CCGCTGGAAAAATCTCGAAA+CGG | + | chr7.4:19902087-19902106 | MS.gene055706:CDS | 45.0% | |
| GAGACTAGAAACTGTTGGAG+TGG | - | chr7.4:19902027-19902046 | None:intergenic | 45.0% | |
| TTCGCAGACGACTTTCATCA+CGG | + | chr7.4:19902130-19902149 | MS.gene055706:CDS | 45.0% | |
| ! | AACCCACCATTGTTTGTTGC+TGG | - | chr7.4:19902358-19902377 | None:intergenic | 45.0% |
| ! | CCGTTTCGAGATTTTTCCAG+CGG | - | chr7.4:19902090-19902109 | None:intergenic | 45.0% |
| ! | CTGATGGGTCTGAAATGACT+GGG | + | chr7.4:19902384-19902403 | MS.gene055706:CDS | 45.0% |
| ! | TCTGATGGGTCTGAAATGAC+TGG | + | chr7.4:19902383-19902402 | MS.gene055706:CDS | 45.0% |
| !! | ATGGTGGGTTCCAATTCTGA+TGG | + | chr7.4:19902368-19902387 | MS.gene055706:CDS | 45.0% |
| !! | CCAACAGTTTCTAGTCTCTC+TGG | + | chr7.4:19902029-19902048 | MS.gene055706:CDS | 45.0% |
| !! | TACTGGTGTGAGATTTGGTG+CGG | + | chr7.4:19902190-19902209 | MS.gene055706:CDS | 45.0% |
| !! | TGGTGGGTTCCAATTCTGAT+GGG | + | chr7.4:19902369-19902388 | MS.gene055706:CDS | 45.0% |
| AAAGCTGACGTGTCAAGCGT+CGG | - | chr7.4:19902314-19902333 | None:intergenic | 50.0% | |
| ACCAGCAGCATCTTCACCAA+TGG | - | chr7.4:19902435-19902454 | None:intergenic | 50.0% | |
| ACCATCTGCCGAAAATTCGC+TGG | - | chr7.4:19902161-19902180 | None:intergenic | 50.0% | |
| ACGTGTCAGTCATAGCTGGA+CGG | - | chr7.4:19901836-19901855 | None:intergenic | 50.0% | |
| CCACCACCAGCAACAAACAA+TGG | + | chr7.4:19902349-19902368 | MS.gene055706:CDS | 50.0% | |
| CCACCAGCAACAAACAATGG+TGG | + | chr7.4:19902352-19902371 | MS.gene055706:CDS | 50.0% | |
| CCAGCAGCATCTTCACCAAT+GGG | - | chr7.4:19902434-19902453 | None:intergenic | 50.0% | |
| CCATCTGCCGAAAATTCGCT+GGG | - | chr7.4:19902160-19902179 | None:intergenic | 50.0% | |
| GAATGTTTCAATGGCGCCGT+TGG | + | chr7.4:19902217-19902236 | MS.gene055706:CDS | 50.0% | |
| TGCGGGGTCGAATGTTTCAA+TGG | + | chr7.4:19902208-19902227 | MS.gene055706:CDS | 50.0% | |
| ! | CCACCATTGTTTGTTGCTGG+TGG | - | chr7.4:19902355-19902374 | None:intergenic | 50.0% |
| ! | CCATTGTTTGTTGCTGGTGG+TGG | - | chr7.4:19902352-19902371 | None:intergenic | 50.0% |
| !! | AACACGTTGACGCTTTGGAG+CGG | - | chr7.4:19902066-19902085 | None:intergenic | 50.0% |
| !! | AAGGGTGAAAGAGCGTCTTC+CGG | - | chr7.4:19901939-19901958 | None:intergenic | 50.0% |
| !! | ACTGGTGTGAGATTTGGTGC+GGG | + | chr7.4:19902191-19902210 | MS.gene055706:CDS | 50.0% |
| !! | TTGTTTGTTGCTGGTGGTGG+TGG | - | chr7.4:19902349-19902368 | None:intergenic | 50.0% |
| !!! | GGTGAAGATGCTGCTGGTTT+TGG | + | chr7.4:19902437-19902456 | MS.gene055706:CDS | 50.0% |
| AGAAACTGTTGGAGTGGCGG+TGG | - | chr7.4:19902021-19902040 | None:intergenic | 55.0% | |
| AGCCACGTGTCAGTCATAGC+TGG | - | chr7.4:19901840-19901859 | None:intergenic | 55.0% | |
| AGTCGTAAACCTCCCTCCTC+CGG | - | chr7.4:19902276-19902295 | None:intergenic | 55.0% | |
| CAGATGGTGCAGCAGGTTAC+TGG | + | chr7.4:19902173-19902192 | MS.gene055706:CDS | 55.0% | |
| CAGCATCTTCACCAATGGGC+TGG | - | chr7.4:19902430-19902449 | None:intergenic | 55.0% | |
| CCCATTGGTGAAGATGCTGC+TGG | + | chr7.4:19902431-19902450 | MS.gene055706:CDS | 55.0% | |
| CTTTCTTTCGGCCAGCCCAT+TGG | + | chr7.4:19902416-19902435 | MS.gene055706:CDS | 55.0% | |
| GCAGACGACTTTCATCACGG+CGG | + | chr7.4:19902133-19902152 | MS.gene055706:CDS | 55.0% | |
| GGAGGTTTACGACTGGTGGA+GGG | + | chr7.4:19902282-19902301 | MS.gene055706:CDS | 55.0% | |
| GGTGAAACCGGAGCCTCATA+GGG | + | chr7.4:19902238-19902257 | MS.gene055706:CDS | 55.0% | |
| GTCCAGCTATGACTGACACG+TGG | + | chr7.4:19901835-19901854 | MS.gene055706:CDS | 55.0% | |
| TGAGGCTCCGGTTTCACCAA+CGG | - | chr7.4:19902236-19902255 | None:intergenic | 55.0% | |
| TGGTGAAACCGGAGCCTCAT+AGG | + | chr7.4:19902237-19902256 | MS.gene055706:CDS | 55.0% | |
| ! | AATGGCGCCGTTGGTGAAAC+CGG | + | chr7.4:19902226-19902245 | MS.gene055706:CDS | 55.0% |
| ! | CCCAGCGAATTTTCGGCAGA+TGG | + | chr7.4:19902157-19902176 | MS.gene055706:CDS | 55.0% |
| ! | GGGTCTGAAATGACTGGGCT+GGG | + | chr7.4:19902389-19902408 | MS.gene055706:CDS | 55.0% |
| ! | TGGGTCTGAAATGACTGGGC+TGG | + | chr7.4:19902388-19902407 | MS.gene055706:CDS | 55.0% |
| ! | TTTTCGGCAGATGGTGCAGC+AGG | + | chr7.4:19902166-19902185 | MS.gene055706:CDS | 55.0% |
| !! | ATGGGCTGGCCGAAAGAAAG+TGG | - | chr7.4:19902416-19902435 | None:intergenic | 55.0% |
| !! | CTGGTGTGAGATTTGGTGCG+GGG | + | chr7.4:19902192-19902211 | MS.gene055706:CDS | 55.0% |
| !! | TGGGCTGGCCGAAAGAAAGT+GGG | - | chr7.4:19902415-19902434 | None:intergenic | 55.0% |
| !!! | GCTGCTGGTTTTGGTTCTGC+AGG | + | chr7.4:19902446-19902465 | MS.gene055706:CDS | 55.0% |
| AACTGTTGGAGTGGCGGTGG+CGG | - | chr7.4:19902018-19902037 | None:intergenic | 60.0% | |
| AAGCGTCAACGTGTTGCCGC+TGG | + | chr7.4:19902071-19902090 | MS.gene055706:CDS | 60.0% | |
| AGTCGTCTGCGAACGCTTCG+AGG | - | chr7.4:19902123-19902142 | None:intergenic | 60.0% | |
| CATAGGGCGGTGGGAGTTAC+CGG | + | chr7.4:19902254-19902273 | MS.gene055706:CDS | 60.0% | |
| GAAACCGGAGCCTCATAGGG+CGG | + | chr7.4:19902241-19902260 | MS.gene055706:CDS | 60.0% | |
| GCGGCAACACGTTGACGCTT+TGG | - | chr7.4:19902071-19902090 | None:intergenic | 60.0% | |
| GGAGGAGGGAGGTTTACGAC+TGG | + | chr7.4:19902275-19902294 | MS.gene055706:CDS | 60.0% | |
| GGAGGGAGGTTTACGACTGG+TGG | + | chr7.4:19902278-19902297 | MS.gene055706:CDS | 60.0% | |
| GGGAGGTTTACGACTGGTGG+AGG | + | chr7.4:19902281-19902300 | MS.gene055706:CDS | 60.0% | |
| GGGCTGGGCCCACTTTCTTT+CGG | + | chr7.4:19902404-19902423 | MS.gene055706:CDS | 60.0% | |
| GTAACTCCCACCGCCCTATG+AGG | - | chr7.4:19902254-19902273 | None:intergenic | 60.0% | |
| ! | CGGCGGACCCAGCGAATTTT+CGG | + | chr7.4:19902150-19902169 | MS.gene055706:CDS | 60.0% |
| ! | GGTGGTTGTAGTGGCGGAGT+CGG | - | chr7.4:19901979-19901998 | None:intergenic | 60.0% |
| !! | GACGGTGGTGGTGGTTGTAG+TGG | - | chr7.4:19901988-19902007 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTAGTGG+CGG | - | chr7.4:19901985-19902004 | None:intergenic | 60.0% |
| CGGTGGGAGTTACCGGAGGA+GGG | + | chr7.4:19902261-19902280 | MS.gene055706:CDS | 65.0% | |
| TGGGAGTTACCGGAGGAGGG+AGG | + | chr7.4:19902264-19902283 | MS.gene055706:CDS | 65.0% | |
| ACCGGAGCCTCATAGGGCGG+TGG | + | chr7.4:19902244-19902263 | MS.gene055706:CDS | 70.0% | |
| AGGGCGGTGGGAGTTACCGG+AGG | + | chr7.4:19902257-19902276 | MS.gene055706:CDS | 70.0% | |
| CCCACCGCCCTATGAGGCTC+CGG | - | chr7.4:19902248-19902267 | None:intergenic | 70.0% | |
| CCGGAGCCTCATAGGGCGGT+GGG | + | chr7.4:19902245-19902264 | MS.gene055706:CDS | 70.0% | |
| GCGGTGGGAGTTACCGGAGG+AGG | + | chr7.4:19902260-19902279 | MS.gene055706:CDS | 70.0% | |
| ! | TGTTGGAGTGGCGGTGGCGG+TGG | - | chr7.4:19902015-19902034 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGACGGTGGTGG+TGG | - | chr7.4:19901997-19902016 | None:intergenic | 70.0% |
| ! | GGCGGTGGCGGTGGTGGTGA+CGG | - | chr7.4:19902006-19902025 | None:intergenic | 75.0% |
| ! | TGGAGTGGCGGTGGCGGTGG+TGG | - | chr7.4:19902012-19902031 | None:intergenic | 75.0% |
| !! | GGCGGTGGTGGTGACGGTGG+TGG | - | chr7.4:19902000-19902019 | None:intergenic | 75.0% |
| !! | GGTGGCGGTGGTGGTGACGG+TGG | - | chr7.4:19902003-19902022 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 19901783 | 19902532 | 19901783 | ID=MS.gene055706 |
| chr7.4 | mRNA | 19901783 | 19902532 | 19901783 | ID=MS.gene055706.t1;Parent=MS.gene055706 |
| chr7.4 | exon | 19901783 | 19902532 | 19901783 | ID=MS.gene055706.t1.exon1;Parent=MS.gene055706.t1 |
| chr7.4 | CDS | 19901783 | 19902532 | 19901783 | ID=cds.MS.gene055706.t1;Parent=MS.gene055706.t1 |
| Gene Sequence |
| Protein sequence |
