Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41898.t1 | XP_003624879.1 | 81 | 247 | 34 | 3 | 3 | 249 | 2 | 235 | 1.50E-78 | 302.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41898.t1 | O80683 | 40.6 | 160 | 77 | 7 | 97 | 249 | 90 | 238 | 1.0e-14 | 82.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41898.t1 | G7L4T3 | 81.0 | 247 | 34 | 3 | 3 | 249 | 2 | 235 | 1.1e-78 | 302.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052011 | MS.gene41898 | 0.806132 | 9.54E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene41898 | -0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene055706 | MS.gene41898 | 0.874219 | 8.01E-68 | -1.69E-46 |
| MS.gene059420 | MS.gene41898 | -0.801029 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41898.t1 | MTR_7g088620 | 88.664 | 247 | 15 | 3 | 3 | 249 | 2 | 235 | 2.95e-125 | 355 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41898.t1 | AT3G56880 | 40.741 | 270 | 111 | 14 | 3 | 249 | 2 | 245 | 1.86e-38 | 134 |
| MS.gene41898.t1 | AT2G41010 | 38.462 | 260 | 122 | 14 | 4 | 249 | 3 | 238 | 1.81e-36 | 129 |
Find 83 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAAGATGCTGCTGGTTT+TGG | 0.281911 | 7.2:+20205856 | MS.gene41898:CDS |
| TTCCCACTCTTGAATCTTCA+TGG | 0.285857 | 7.2:+20205917 | MS.gene41898:CDS |
| CATAGGGCGGTGGGAGTTAC+CGG | 0.299200 | 7.2:+20205673 | MS.gene41898:CDS |
| CATTTCAGACCCATCAGAAT+TGG | 0.339724 | 7.2:-20205797 | None:intergenic |
| TGGTGAAACCGGAGCCTCAT+AGG | 0.350138 | 7.2:+20205656 | MS.gene41898:CDS |
| CAGATGGTGCAGCAGGTTAC+TGG | 0.357216 | 7.2:+20205592 | MS.gene41898:CDS |
| TGGGTCTGAAATGACTGGGC+TGG | 0.364136 | 7.2:+20205807 | MS.gene41898:CDS |
| GGGCTGGGCCCACTTTCTTT+CGG | 0.373567 | 7.2:+20205823 | MS.gene41898:CDS |
| AACCCACCATTGTTTGTTGC+TGG | 0.374638 | 7.2:-20205774 | None:intergenic |
| CAGGTTACTGGTGTGAGATT+TGG | 0.376680 | 7.2:+20205604 | MS.gene41898:CDS |
| GCGGCAACACGTTGACGCTT+TGG | 0.391062 | 7.2:-20205487 | None:intergenic |
| GCGGTGGGAGTTACCGGAGG+AGG | 0.393335 | 7.2:+20205679 | MS.gene41898:CDS |
| TGTTGGAGTGGCGGTGGTGG+TGG | 0.397501 | 7.2:-20205431 | None:intergenic |
| AATGGCGCCGTTGGTGAAAC+CGG | 0.399142 | 7.2:+20205645 | MS.gene41898:CDS |
| GGGTCTGAAATGACTGGGCT+GGG | 0.402329 | 7.2:+20205808 | MS.gene41898:CDS |
| ATTTGTGAAGAGCTTTGGTT+AGG | 0.408283 | 7.2:-20205309 | None:intergenic |
| CTTTCTTTCGGCCAGCCCAT+TGG | 0.411983 | 7.2:+20205835 | MS.gene41898:CDS |
| GGTGGTGGTGGTGACGGTGG+TGG | 0.413864 | 7.2:-20205416 | None:intergenic |
| GAGTGATTTGTGAAGAGCTT+TGG | 0.414461 | 7.2:-20205314 | None:intergenic |
| CCAACAGTTTCTAGTCTCTC+TGG | 0.416676 | 7.2:+20205448 | MS.gene41898:CDS |
| CCATTGTTTGTTGCTGGTGG+TGG | 0.431197 | 7.2:-20205768 | None:intergenic |
| GGAGGGAGGTTTACGACTGC+TGG | 0.431786 | 7.2:+20205697 | MS.gene41898:CDS |
| TGGAGTGGCGGTGGTGGTGG+TGG | 0.437500 | 7.2:-20205428 | None:intergenic |
| AAGCGTCAACGTGTTGCCGC+TGG | 0.437986 | 7.2:+20205490 | MS.gene41898:CDS |
| TGCGGGGTCGAATGTTTCAA+TGG | 0.461047 | 7.2:+20205627 | MS.gene41898:CDS |
| TTGTTTGTTGCTGGTGGTGG+TGG | 0.462466 | 7.2:-20205765 | None:intergenic |
| GGTGGTGGTGACGGTGGTGG+CGG | 0.465680 | 7.2:-20205413 | None:intergenic |
| AACTGTTGGAGTGGCGGTGG+TGG | 0.477105 | 7.2:-20205434 | None:intergenic |
| GGCGGTTGTAGTGGCGGAGT+CGG | 0.479066 | 7.2:-20205395 | None:intergenic |
| ACTGGTGTGAGATTTGGTGC+GGG | 0.482366 | 7.2:+20205610 | MS.gene41898:CDS |
| TTTGTGAAGAGCTTTGGTTA+GGG | 0.489514 | 7.2:-20205308 | None:intergenic |
| ACCGGAGCCTCATAGGGCGG+TGG | 0.497891 | 7.2:+20205663 | MS.gene41898:CDS |
| GTAACTCCCACCGCCCTATG+AGG | 0.503102 | 7.2:-20205670 | None:intergenic |
| CCCACCGCCCTATGAGGCTC+CGG | 0.503136 | 7.2:-20205664 | None:intergenic |
| ATGGGCTGGCCGAAAGAAAG+TGG | 0.506747 | 7.2:-20205832 | None:intergenic |
| TCTGATGGGTCTGAAATGAC+TGG | 0.508381 | 7.2:+20205802 | MS.gene41898:CDS |
| TTCCATGAAGATTCAAGAGT+GGG | 0.509563 | 7.2:-20205919 | None:intergenic |
| GACTTTCATCACGGCAGACC+CGG | 0.509925 | 7.2:+20205558 | MS.gene41898:CDS |
| CAGCATCTTCACCAATGGGC+TGG | 0.511191 | 7.2:-20205846 | None:intergenic |
| CCATCTGCCGAAAATTCGCC+GGG | 0.511584 | 7.2:-20205576 | None:intergenic |
| AGTCGTAAACCTCCCTCCTC+CGG | 0.514267 | 7.2:-20205692 | None:intergenic |
| AAGGGTGAAAGAGCGTCTTC+CGG | 0.514633 | 7.2:-20205355 | None:intergenic |
| AGCGTCAACGTGTTGCCGCT+GGG | 0.516469 | 7.2:+20205491 | MS.gene41898:CDS |
| GGTGAAACCGGAGCCTCATA+GGG | 0.519006 | 7.2:+20205657 | MS.gene41898:CDS |
| CCACCATTGTTTGTTGCTGG+TGG | 0.519482 | 7.2:-20205771 | None:intergenic |
| GACGGTGGTGGCGGTTGTAG+TGG | 0.524848 | 7.2:-20205404 | None:intergenic |
| TAGCAGCTAGCATTGAATCA+TGG | 0.527048 | 7.2:+20205224 | MS.gene41898:CDS |
| AGTCGTCTGCGAACGCTTCG+AGG | 0.529472 | 7.2:-20205539 | None:intergenic |
| AGCCACGTGTCAGTCATAGC+TGG | 0.533397 | 7.2:-20205256 | None:intergenic |
| ACCATCTGCCGAAAATTCGC+CGG | 0.534531 | 7.2:-20205577 | None:intergenic |
| GAATGTTTCAATGGCGCCGT+TGG | 0.536252 | 7.2:+20205636 | MS.gene41898:CDS |
| ATGGTGGGTTCCAATTCTGA+TGG | 0.537849 | 7.2:+20205787 | MS.gene41898:CDS |
| CCAGCAGCATCTTCACCAAT+GGG | 0.539442 | 7.2:-20205850 | None:intergenic |
| ACCAGCAGCATCTTCACCAA+TGG | 0.540992 | 7.2:-20205851 | None:intergenic |
| CGGTGGGAGTTACCGGAGGA+GGG | 0.551350 | 7.2:+20205680 | MS.gene41898:CDS |
| CCAGAGAGACTAGAAACTGT+TGG | 0.552016 | 7.2:-20205448 | None:intergenic |
| TGAGGCTCCGGTTTCACCAA+CGG | 0.555287 | 7.2:-20205652 | None:intergenic |
| CCCATTGGTGAAGATGCTGC+TGG | 0.556039 | 7.2:+20205850 | MS.gene41898:CDS |
| CCGGAGCCTCATAGGGCGGT+GGG | 0.556410 | 7.2:+20205664 | MS.gene41898:CDS |
| TACTGGTGTGAGATTTGGTG+CGG | 0.557781 | 7.2:+20205609 | MS.gene41898:CDS |
| GGGAGGTTTACGACTGCTGG+AGG | 0.565845 | 7.2:+20205700 | MS.gene41898:CDS |
| TGGGAGTTACCGGAGGAGGG+AGG | 0.580699 | 7.2:+20205683 | MS.gene41898:CDS |
| AAAGCTGACGTGTCAAGCGT+CGG | 0.583097 | 7.2:-20205730 | None:intergenic |
| AGAAACTGTTGGAGTGGCGG+TGG | 0.588021 | 7.2:-20205437 | None:intergenic |
| CTGATGGGTCTGAAATGACT+GGG | 0.588568 | 7.2:+20205803 | MS.gene41898:CDS |
| CCGCTGGGAAAATCTCGAAA+CGG | 0.590312 | 7.2:+20205506 | MS.gene41898:CDS |
| GGTGGTGGCGGTTGTAGTGG+CGG | 0.595754 | 7.2:-20205401 | None:intergenic |
| CACCAGCAACAAACAATGGT+GGG | 0.598701 | 7.2:+20205772 | MS.gene41898:CDS |
| AACACGTTGACGCTTTGGAG+CGG | 0.606224 | 7.2:-20205482 | None:intergenic |
| TGGTGGGTTCCAATTCTGAT+GGG | 0.610091 | 7.2:+20205788 | MS.gene41898:CDS |
| ACTAGAAACTGTTGGAGTGG+CGG | 0.612468 | 7.2:-20205440 | None:intergenic |
| TTTCCATGAAGATTCAAGAG+TGG | 0.617020 | 7.2:-20205920 | None:intergenic |
| CCACCAGCAACAAACAATGG+TGG | 0.621899 | 7.2:+20205771 | MS.gene41898:CDS |
| CCACCACCAGCAACAAACAA+TGG | 0.623775 | 7.2:+20205768 | MS.gene41898:CDS |
| TGGGCTGGCCGAAAGAAAGT+GGG | 0.631627 | 7.2:-20205831 | None:intergenic |
| GAGACTAGAAACTGTTGGAG+TGG | 0.634144 | 7.2:-20205443 | None:intergenic |
| GGAGGTTTACGACTGCTGGA+GGG | 0.637249 | 7.2:+20205701 | MS.gene41898:CDS |
| TTCGCAGACGACTTTCATCA+CGG | 0.644461 | 7.2:+20205549 | MS.gene41898:CDS |
| AGGGCGGTGGGAGTTACCGG+AGG | 0.649949 | 7.2:+20205676 | MS.gene41898:CDS |
| CTGGTGTGAGATTTGGTGCG+GGG | 0.663099 | 7.2:+20205611 | MS.gene41898:CDS |
| GAAACCGGAGCCTCATAGGG+CGG | 0.665818 | 7.2:+20205660 | MS.gene41898:CDS |
| ACGTGTCAGTCATAGCTGGA+CGG | 0.705419 | 7.2:-20205252 | None:intergenic |
| GTCCAGCTATGACTGACACG+TGG | 0.771552 | 7.2:+20205254 | MS.gene41898:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTGATGAGATTTAAAAA+GGG | - | chr7.2:20205376-20205395 | None:intergenic | 20.0% |
| !!! | GGTTTTGATGAGATTTAAAA+AGG | - | chr7.2:20205377-20205396 | None:intergenic | 25.0% |
| TTCCATGAAGATTCAAGAGT+GGG | - | chr7.2:20205922-20205941 | None:intergenic | 35.0% | |
| TTTCCATGAAGATTCAAGAG+TGG | - | chr7.2:20205923-20205942 | None:intergenic | 35.0% | |
| ! | ATTTGTGAAGAGCTTTGGTT+AGG | - | chr7.2:20205312-20205331 | None:intergenic | 35.0% |
| ! | TTTGTGAAGAGCTTTGGTTA+GGG | - | chr7.2:20205311-20205330 | None:intergenic | 35.0% |
| CATTTCAGACCCATCAGAAT+TGG | - | chr7.2:20205800-20205819 | None:intergenic | 40.0% | |
| CTCTTCTTCTTCTTCTTCAC+CGG | + | chr7.2:20205336-20205355 | MS.gene41898:CDS | 40.0% | |
| TTCCCACTCTTGAATCTTCA+TGG | + | chr7.2:20205917-20205936 | MS.gene41898:CDS | 40.0% | |
| ! | GAGTGATTTGTGAAGAGCTT+TGG | - | chr7.2:20205317-20205336 | None:intergenic | 40.0% |
| ! | TAGCAGCTAGCATTGAATCA+TGG | + | chr7.2:20205224-20205243 | MS.gene41898:CDS | 40.0% |
| ACTAGAAACTGTTGGAGTGG+CGG | - | chr7.2:20205443-20205462 | None:intergenic | 45.0% | |
| CACCAGCAACAAACAATGGT+GGG | + | chr7.2:20205772-20205791 | MS.gene41898:CDS | 45.0% | |
| CAGGTTACTGGTGTGAGATT+TGG | + | chr7.2:20205604-20205623 | MS.gene41898:CDS | 45.0% | |
| CCAGAGAGACTAGAAACTGT+TGG | - | chr7.2:20205451-20205470 | None:intergenic | 45.0% | |
| GAGACTAGAAACTGTTGGAG+TGG | - | chr7.2:20205446-20205465 | None:intergenic | 45.0% | |
| TTCGCAGACGACTTTCATCA+CGG | + | chr7.2:20205549-20205568 | MS.gene41898:CDS | 45.0% | |
| ! | AACCCACCATTGTTTGTTGC+TGG | - | chr7.2:20205777-20205796 | None:intergenic | 45.0% |
| ! | CTGATGGGTCTGAAATGACT+GGG | + | chr7.2:20205803-20205822 | MS.gene41898:CDS | 45.0% |
| ! | TCTGATGGGTCTGAAATGAC+TGG | + | chr7.2:20205802-20205821 | MS.gene41898:CDS | 45.0% |
| !! | ATGGTGGGTTCCAATTCTGA+TGG | + | chr7.2:20205787-20205806 | MS.gene41898:CDS | 45.0% |
| !! | CCAACAGTTTCTAGTCTCTC+TGG | + | chr7.2:20205448-20205467 | MS.gene41898:CDS | 45.0% |
| !! | TACTGGTGTGAGATTTGGTG+CGG | + | chr7.2:20205609-20205628 | MS.gene41898:CDS | 45.0% |
| !! | TGGTGGGTTCCAATTCTGAT+GGG | + | chr7.2:20205788-20205807 | MS.gene41898:CDS | 45.0% |
| AAAGCTGACGTGTCAAGCGT+CGG | - | chr7.2:20205733-20205752 | None:intergenic | 50.0% | |
| ACCAGCAGCATCTTCACCAA+TGG | - | chr7.2:20205854-20205873 | None:intergenic | 50.0% | |
| ACCATCTGCCGAAAATTCGC+CGG | - | chr7.2:20205580-20205599 | None:intergenic | 50.0% | |
| ACGTGTCAGTCATAGCTGGA+CGG | - | chr7.2:20205255-20205274 | None:intergenic | 50.0% | |
| CCACCACCAGCAACAAACAA+TGG | + | chr7.2:20205768-20205787 | MS.gene41898:CDS | 50.0% | |
| CCACCAGCAACAAACAATGG+TGG | + | chr7.2:20205771-20205790 | MS.gene41898:CDS | 50.0% | |
| CCAGCAGCATCTTCACCAAT+GGG | - | chr7.2:20205853-20205872 | None:intergenic | 50.0% | |
| CCGCTGGGAAAATCTCGAAA+CGG | + | chr7.2:20205506-20205525 | MS.gene41898:CDS | 50.0% | |
| GAATGTTTCAATGGCGCCGT+TGG | + | chr7.2:20205636-20205655 | MS.gene41898:CDS | 50.0% | |
| TGCGGGGTCGAATGTTTCAA+TGG | + | chr7.2:20205627-20205646 | MS.gene41898:CDS | 50.0% | |
| ! | CCACCATTGTTTGTTGCTGG+TGG | - | chr7.2:20205774-20205793 | None:intergenic | 50.0% |
| ! | CCATTGTTTGTTGCTGGTGG+TGG | - | chr7.2:20205771-20205790 | None:intergenic | 50.0% |
| ! | CCGTTTCGAGATTTTCCCAG+CGG | - | chr7.2:20205509-20205528 | None:intergenic | 50.0% |
| !! | AACACGTTGACGCTTTGGAG+CGG | - | chr7.2:20205485-20205504 | None:intergenic | 50.0% |
| !! | AAGGGTGAAAGAGCGTCTTC+CGG | - | chr7.2:20205358-20205377 | None:intergenic | 50.0% |
| !! | ACTGGTGTGAGATTTGGTGC+GGG | + | chr7.2:20205610-20205629 | MS.gene41898:CDS | 50.0% |
| !! | TTGTTTGTTGCTGGTGGTGG+TGG | - | chr7.2:20205768-20205787 | None:intergenic | 50.0% |
| !!! | GGTGAAGATGCTGCTGGTTT+TGG | + | chr7.2:20205856-20205875 | MS.gene41898:CDS | 50.0% |
| AGAAACTGTTGGAGTGGCGG+TGG | - | chr7.2:20205440-20205459 | None:intergenic | 55.0% | |
| AGCCACGTGTCAGTCATAGC+TGG | - | chr7.2:20205259-20205278 | None:intergenic | 55.0% | |
| AGTCGTAAACCTCCCTCCTC+CGG | - | chr7.2:20205695-20205714 | None:intergenic | 55.0% | |
| CAGATGGTGCAGCAGGTTAC+TGG | + | chr7.2:20205592-20205611 | MS.gene41898:CDS | 55.0% | |
| CAGCATCTTCACCAATGGGC+TGG | - | chr7.2:20205849-20205868 | None:intergenic | 55.0% | |
| CCATCTGCCGAAAATTCGCC+GGG | - | chr7.2:20205579-20205598 | None:intergenic | 55.0% | |
| CCCATTGGTGAAGATGCTGC+TGG | + | chr7.2:20205850-20205869 | MS.gene41898:CDS | 55.0% | |
| CTTTCTTTCGGCCAGCCCAT+TGG | + | chr7.2:20205835-20205854 | MS.gene41898:CDS | 55.0% | |
| GACTTTCATCACGGCAGACC+CGG | + | chr7.2:20205558-20205577 | MS.gene41898:CDS | 55.0% | |
| GGAGGTTTACGACTGCTGGA+GGG | + | chr7.2:20205701-20205720 | MS.gene41898:CDS | 55.0% | |
| GGTGAAACCGGAGCCTCATA+GGG | + | chr7.2:20205657-20205676 | MS.gene41898:CDS | 55.0% | |
| GTCCAGCTATGACTGACACG+TGG | + | chr7.2:20205254-20205273 | MS.gene41898:CDS | 55.0% | |
| TGAGGCTCCGGTTTCACCAA+CGG | - | chr7.2:20205655-20205674 | None:intergenic | 55.0% | |
| TGGTGAAACCGGAGCCTCAT+AGG | + | chr7.2:20205656-20205675 | MS.gene41898:CDS | 55.0% | |
| ! | AATGGCGCCGTTGGTGAAAC+CGG | + | chr7.2:20205645-20205664 | MS.gene41898:CDS | 55.0% |
| ! | GGGTCTGAAATGACTGGGCT+GGG | + | chr7.2:20205808-20205827 | MS.gene41898:CDS | 55.0% |
| ! | TGGGTCTGAAATGACTGGGC+TGG | + | chr7.2:20205807-20205826 | MS.gene41898:CDS | 55.0% |
| ! | TTTTCGGCAGATGGTGCAGC+AGG | + | chr7.2:20205585-20205604 | MS.gene41898:CDS | 55.0% |
| !! | ATGGGCTGGCCGAAAGAAAG+TGG | - | chr7.2:20205835-20205854 | None:intergenic | 55.0% |
| !! | CTGGTGTGAGATTTGGTGCG+GGG | + | chr7.2:20205611-20205630 | MS.gene41898:CDS | 55.0% |
| !! | TGGGCTGGCCGAAAGAAAGT+GGG | - | chr7.2:20205834-20205853 | None:intergenic | 55.0% |
| !!! | GCTGCTGGTTTTGGTTCTGC+AGG | + | chr7.2:20205865-20205884 | MS.gene41898:CDS | 55.0% |
| AACTGTTGGAGTGGCGGTGG+TGG | - | chr7.2:20205437-20205456 | None:intergenic | 60.0% | |
| AAGCGTCAACGTGTTGCCGC+TGG | + | chr7.2:20205490-20205509 | MS.gene41898:CDS | 60.0% | |
| AGCGTCAACGTGTTGCCGCT+GGG | + | chr7.2:20205491-20205510 | MS.gene41898:CDS | 60.0% | |
| AGTCGTCTGCGAACGCTTCG+AGG | - | chr7.2:20205542-20205561 | None:intergenic | 60.0% | |
| CATAGGGCGGTGGGAGTTAC+CGG | + | chr7.2:20205673-20205692 | MS.gene41898:CDS | 60.0% | |
| GAAACCGGAGCCTCATAGGG+CGG | + | chr7.2:20205660-20205679 | MS.gene41898:CDS | 60.0% | |
| GCGGCAACACGTTGACGCTT+TGG | - | chr7.2:20205490-20205509 | None:intergenic | 60.0% | |
| GGAGGGAGGTTTACGACTGC+TGG | + | chr7.2:20205697-20205716 | MS.gene41898:CDS | 60.0% | |
| GGGAGGTTTACGACTGCTGG+AGG | + | chr7.2:20205700-20205719 | MS.gene41898:CDS | 60.0% | |
| GGGCTGGGCCCACTTTCTTT+CGG | + | chr7.2:20205823-20205842 | MS.gene41898:CDS | 60.0% | |
| GTAACTCCCACCGCCCTATG+AGG | - | chr7.2:20205673-20205692 | None:intergenic | 60.0% | |
| ! | CCCGGCGAATTTTCGGCAGA+TGG | + | chr7.2:20205576-20205595 | MS.gene41898:CDS | 60.0% |
| ! | CGGCAGACCCGGCGAATTTT+CGG | + | chr7.2:20205569-20205588 | MS.gene41898:CDS | 60.0% |
| CGGTGGGAGTTACCGGAGGA+GGG | + | chr7.2:20205680-20205699 | MS.gene41898:CDS | 65.0% | |
| TGGGAGTTACCGGAGGAGGG+AGG | + | chr7.2:20205683-20205702 | MS.gene41898:CDS | 65.0% | |
| ! | GGCGGTTGTAGTGGCGGAGT+CGG | - | chr7.2:20205398-20205417 | None:intergenic | 65.0% |
| ! | TGTTGGAGTGGCGGTGGTGG+TGG | - | chr7.2:20205434-20205453 | None:intergenic | 65.0% |
| !! | GACGGTGGTGGCGGTTGTAG+TGG | - | chr7.2:20205407-20205426 | None:intergenic | 65.0% |
| !! | GGTGGTGGCGGTTGTAGTGG+CGG | - | chr7.2:20205404-20205423 | None:intergenic | 65.0% |
| ACCGGAGCCTCATAGGGCGG+TGG | + | chr7.2:20205663-20205682 | MS.gene41898:CDS | 70.0% | |
| AGGGCGGTGGGAGTTACCGG+AGG | + | chr7.2:20205676-20205695 | MS.gene41898:CDS | 70.0% | |
| CCCACCGCCCTATGAGGCTC+CGG | - | chr7.2:20205667-20205686 | None:intergenic | 70.0% | |
| CCGGAGCCTCATAGGGCGGT+GGG | + | chr7.2:20205664-20205683 | MS.gene41898:CDS | 70.0% | |
| GCGGTGGGAGTTACCGGAGG+AGG | + | chr7.2:20205679-20205698 | MS.gene41898:CDS | 70.0% | |
| !! | GGCGGTGGTGGTGGTGGTGA+CGG | - | chr7.2:20205425-20205444 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGACGGTGGTGG+CGG | - | chr7.2:20205416-20205435 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGGTGACGGTGG+TGG | - | chr7.2:20205419-20205438 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGGTGGTGACGG+TGG | - | chr7.2:20205422-20205441 | None:intergenic | 70.0% |
| !! | TGGAGTGGCGGTGGTGGTGG+TGG | - | chr7.2:20205431-20205450 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 20205202 | 20205951 | 20205202 | ID=MS.gene41898 |
| chr7.2 | mRNA | 20205202 | 20205951 | 20205202 | ID=MS.gene41898.t1;Parent=MS.gene41898 |
| chr7.2 | exon | 20205202 | 20205951 | 20205202 | ID=MS.gene41898.t1.exon1;Parent=MS.gene41898.t1 |
| chr7.2 | CDS | 20205202 | 20205951 | 20205202 | ID=cds.MS.gene41898.t1;Parent=MS.gene41898.t1 |
| Gene Sequence |
| Protein sequence |
