Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055902.t1 | XP_003590460.1 | 98.3 | 463 | 8 | 0 | 1 | 463 | 1 | 463 | 1.70E-248 | 868.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055902.t1 | Q9FFY9 | 25.4 | 142 | 82 | 2 | 278 | 415 | 488 | 609 | 2.5e-06 | 55.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055902.t1 | G7IA94 | 98.3 | 463 | 8 | 0 | 1 | 463 | 1 | 463 | 1.2e-248 | 868.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene055902.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055902 | MS.gene064486 | 0.854583 | 1.12E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055902.t1 | MTR_1g063940 | 98.272 | 463 | 8 | 0 | 1 | 463 | 1 | 463 | 0.0 | 942 |
| MS.gene055902.t1 | MTR_1g063940 | 98.056 | 463 | 8 | 1 | 1 | 463 | 1 | 462 | 0.0 | 936 |
| MS.gene055902.t1 | MTR_1g063940 | 96.603 | 471 | 8 | 1 | 1 | 463 | 1 | 471 | 0.0 | 936 |
| MS.gene055902.t1 | MTR_8g020330 | 40.741 | 108 | 62 | 2 | 337 | 443 | 534 | 640 | 1.01e-17 | 86.3 |
| MS.gene055902.t1 | MTR_8g020330 | 39.370 | 127 | 72 | 3 | 318 | 443 | 523 | 645 | 1.02e-17 | 86.3 |
| MS.gene055902.t1 | MTR_8g020330 | 39.370 | 127 | 72 | 3 | 318 | 443 | 527 | 649 | 1.06e-17 | 86.3 |
| MS.gene055902.t1 | MTR_8g020330 | 40.741 | 108 | 62 | 2 | 337 | 443 | 538 | 644 | 1.09e-17 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055902.t1 | AT2G37025 | 50.000 | 114 | 56 | 1 | 321 | 433 | 271 | 384 | 1.06e-30 | 123 |
| MS.gene055902.t1 | AT2G37025 | 50.000 | 114 | 56 | 1 | 321 | 433 | 271 | 384 | 1.06e-30 | 123 |
| MS.gene055902.t1 | AT2G37025 | 50.000 | 114 | 56 | 1 | 321 | 433 | 271 | 384 | 1.06e-30 | 123 |
| MS.gene055902.t1 | AT1G72650 | 46.739 | 92 | 48 | 1 | 337 | 428 | 536 | 626 | 8.86e-20 | 92.8 |
| MS.gene055902.t1 | AT1G72650 | 46.739 | 92 | 48 | 1 | 337 | 428 | 530 | 620 | 9.01e-20 | 92.8 |
| MS.gene055902.t1 | AT1G17460 | 28.623 | 276 | 125 | 8 | 231 | 442 | 306 | 573 | 4.10e-18 | 87.4 |
| MS.gene055902.t1 | AT1G17460 | 28.623 | 276 | 125 | 8 | 231 | 442 | 327 | 594 | 4.12e-18 | 87.4 |
| MS.gene055902.t1 | AT1G17460 | 28.623 | 276 | 125 | 8 | 231 | 442 | 347 | 614 | 4.25e-18 | 87.4 |
Find 90 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATAGTACCTCTTTCTT+TGG | 0.210015 | 1.1:-48379751 | None:intergenic |
| AATGAAACATGATCATTTCT+AGG | 0.222946 | 1.1:-48378173 | None:intergenic |
| TACTCTTTGGCATTTCATAT+TGG | 0.278595 | 1.1:-48377266 | None:intergenic |
| GTGCAGTACAGGCTCTTAAA+AGG | 0.298577 | 1.1:-48380791 | None:intergenic |
| ACTCGGCTAGCCACACTAAA+AGG | 0.320293 | 1.1:-48381066 | None:intergenic |
| GGATTTAGATTGTGTACTAT+TGG | 0.323521 | 1.1:-48379287 | None:intergenic |
| TTTGAATGACAAAGATGATT+TGG | 0.323845 | 1.1:+48378698 | MS.gene055902:CDS |
| TCGGACTCTTCCGAGGAAAA+AGG | 0.330555 | 1.1:-48380495 | None:intergenic |
| TTGTTTCGTCGCTTTGGGTA+TGG | 0.332970 | 1.1:-48381111 | None:intergenic |
| GATTTAGATTGTGTACTATT+GGG | 0.352272 | 1.1:-48379286 | None:intergenic |
| CTCATCCAGAGATTTAATTT+CGG | 0.364384 | 1.1:-48379308 | None:intergenic |
| ATATACTGTTAGGTCCTTGA+TGG | 0.365380 | 1.1:+48378933 | MS.gene055902:intron |
| CTTCCATTTCATCATCTTGA+AGG | 0.382415 | 1.1:-48378130 | None:intergenic |
| CTTGATGGATTCCTTGGAGA+TGG | 0.383282 | 1.1:+48378948 | MS.gene055902:CDS |
| TAGAAATGATCATGTTTCAT+TGG | 0.391808 | 1.1:+48378175 | MS.gene055902:CDS |
| TAGGTCCTTGATGGATTCCT+TGG | 0.398304 | 1.1:+48378942 | MS.gene055902:intron |
| TGTTTCGTCGCTTTGGGTAT+GGG | 0.398644 | 1.1:-48381110 | None:intergenic |
| TGCTTATGAAGACTCGCCTT+TGG | 0.398646 | 1.1:+48379183 | MS.gene055902:CDS |
| TAAATCCGAAATTAAATCTC+TGG | 0.403561 | 1.1:+48379303 | MS.gene055902:CDS |
| TGCATGTGGAGGGTATTTCT+TGG | 0.407708 | 1.1:+48379025 | MS.gene055902:CDS |
| TACATGCAATCTACATTTGA+TGG | 0.413497 | 1.1:-48379379 | None:intergenic |
| ATTCCTTGGAGATGGATTCC+TGG | 0.426741 | 1.1:+48378956 | MS.gene055902:CDS |
| TCTACATTTGATGGTTGAGT+TGG | 0.429648 | 1.1:-48379370 | None:intergenic |
| ATTGATGGCATATCTCAATA+TGG | 0.429927 | 1.1:+48380606 | MS.gene055902:CDS |
| CTCCCTTCAAGATGATGAAA+TGG | 0.431701 | 1.1:+48378127 | MS.gene055902:CDS |
| AGTCATTCTCCAGGATTTAG+TGG | 0.434512 | 1.1:+48379223 | MS.gene055902:CDS |
| CCCTGACATCTGTGGGAGTT+CGG | 0.437149 | 1.1:-48380680 | None:intergenic |
| TATACCTCTGAGTAGGCTTT+CGG | 0.437182 | 1.1:-48379537 | None:intergenic |
| ACCGAACTCCCACAGATGTC+AGG | 0.442198 | 1.1:+48380679 | MS.gene055902:CDS |
| AATGATCATGTTTCATTGGA+TGG | 0.447117 | 1.1:+48378179 | MS.gene055902:CDS |
| CACTAAAAGGTAAGATCCGC+GGG | 0.452158 | 1.1:-48381053 | None:intergenic |
| GCATGTGGAGGGTATTTCTT+GGG | 0.460808 | 1.1:+48379026 | MS.gene055902:CDS |
| TTTCGGAATCTCTTCTCTCT+AGG | 0.461041 | 1.1:-48379520 | None:intergenic |
| TAGTGTGGCTAGCCGAGTGC+TGG | 0.464765 | 1.1:+48381071 | MS.gene055902:CDS |
| ATGATACACATGGTGTCTTC+AGG | 0.468776 | 1.1:+48379341 | MS.gene055902:CDS |
| AACAATGGTTATCCTTTAGC+TGG | 0.469343 | 1.1:+48379439 | MS.gene055902:CDS |
| ACTTGCGCAAATATTCTTCC+CGG | 0.477272 | 1.1:-48377240 | None:intergenic |
| GGCTAGCCGAGTGCTGGAAT+TGG | 0.480997 | 1.1:+48381077 | MS.gene055902:CDS |
| GAAGTGACAAAGTTGATTGA+TGG | 0.483810 | 1.1:+48380591 | MS.gene055902:CDS |
| GCTGAATTTCTGTGCAGTAC+AGG | 0.484370 | 1.1:-48380802 | None:intergenic |
| CCGCTACTAGACTCGTCGCT+TGG | 0.485164 | 1.1:-48379682 | None:intergenic |
| CTACTGGTGTAAAACGTAAA+CGG | 0.490582 | 1.1:+48379602 | MS.gene055902:CDS |
| CAAGAGAATATGCGATGGAC+CGG | 0.494472 | 1.1:+48377221 | None:intergenic |
| AATTCAGAAAGTCATTCTCC+AGG | 0.495964 | 1.1:+48379214 | MS.gene055902:CDS |
| TATGGTCCATCTAGTAGTCT+TGG | 0.496122 | 1.1:+48381156 | MS.gene055902:CDS |
| GAAGAAAGAATCAAAGGATG+TGG | 0.504028 | 1.1:+48380559 | MS.gene055902:CDS |
| TGGTGTCAAATGTTCATCCT+CGG | 0.505342 | 1.1:-48380514 | None:intergenic |
| GGCATATCTCAATATGGAGT+TGG | 0.506463 | 1.1:+48380612 | MS.gene055902:CDS |
| GAAATACCCTCCACATGCAT+TGG | 0.510672 | 1.1:-48379021 | None:intergenic |
| CTCAATATGGAGTTGGTCGA+TGG | 0.518114 | 1.1:+48380619 | MS.gene055902:CDS |
| TTCCATTTCATCATCTTGAA+GGG | 0.518648 | 1.1:-48378129 | None:intergenic |
| AGATTCACCAGTGAAAACTA+TGG | 0.522871 | 1.1:+48381138 | MS.gene055902:CDS |
| GTTGACATCAATGATCTTGA+AGG | 0.524785 | 1.1:+48378984 | MS.gene055902:CDS |
| TGAAGACACCATGTGTATCA+TGG | 0.526838 | 1.1:-48379339 | None:intergenic |
| ATTTCATCATCTTGAAGGGA+GGG | 0.528637 | 1.1:-48378125 | None:intergenic |
| TAGTATATTGTCTTGTAAGA+AGG | 0.534253 | 1.1:+48379462 | MS.gene055902:CDS |
| GTGCTACTTCCACTAAATCC+TGG | 0.534846 | 1.1:-48379232 | None:intergenic |
| GACAATATACTACCAGCTAA+AGG | 0.542357 | 1.1:-48379451 | None:intergenic |
| CAAGAAGCATCCAAAGAAAG+AGG | 0.542469 | 1.1:+48379741 | MS.gene055902:CDS |
| TTTAGTGGAAGTAGCACTGT+TGG | 0.554801 | 1.1:+48379238 | MS.gene055902:CDS |
| CATTTCATCATCTTGAAGGG+AGG | 0.558348 | 1.1:-48378126 | None:intergenic |
| AAGATCGAAGAAAGAATCAA+AGG | 0.561345 | 1.1:+48380553 | MS.gene055902:CDS |
| CGGAATCTCTTCTCTCTAGG+TGG | 0.568097 | 1.1:-48379517 | None:intergenic |
| CATTGATGTCAACATCATCC+AGG | 0.573797 | 1.1:-48378974 | None:intergenic |
| AGTGGAAGTAGCACTGTTGG+TGG | 0.573972 | 1.1:+48379241 | MS.gene055902:CDS |
| TCTTCAATATACCTCTGAGT+AGG | 0.580112 | 1.1:-48379544 | None:intergenic |
| GTTTAGCCAATTCCAGCACT+CGG | 0.584124 | 1.1:-48381083 | None:intergenic |
| GTGGAAGTAGCACTGTTGGT+GGG | 0.586298 | 1.1:+48379242 | MS.gene055902:CDS |
| CAAAGATGATTTGGAACTAG+AGG | 0.590374 | 1.1:+48378707 | MS.gene055902:CDS |
| CATCTCCAAGGAATCCATCA+AGG | 0.593123 | 1.1:-48378947 | None:intergenic |
| AAGAGAATATGCGATGGACC+GGG | 0.599053 | 1.1:+48377222 | None:intergenic |
| TACAGTACCCTGACATCTGT+GGG | 0.600151 | 1.1:-48380687 | None:intergenic |
| TTCATCCTCGGACTCTTCCG+AGG | 0.613472 | 1.1:-48380502 | None:intergenic |
| ATCATCTTTGTCATTCAAAG+CGG | 0.620385 | 1.1:-48378694 | None:intergenic |
| CCGAACTCCCACAGATGTCA+GGG | 0.622447 | 1.1:+48380680 | MS.gene055902:CDS |
| GAAGACACCATGTGTATCAT+GGG | 0.623115 | 1.1:-48379338 | None:intergenic |
| TATGATTTATGCAGGACAAG+TGG | 0.628551 | 1.1:+48380763 | MS.gene055902:intron |
| GTACAGTACCCTGACATCTG+TGG | 0.628681 | 1.1:-48380688 | None:intergenic |
| TTGGCAAAAGAAATTTACGT+AGG | 0.641798 | 1.1:+48381175 | MS.gene055902:CDS |
| CATCCAGGAATCCATCTCCA+AGG | 0.645479 | 1.1:-48378959 | None:intergenic |
| ACACTAAAAGGTAAGATCCG+CGG | 0.650416 | 1.1:-48381054 | None:intergenic |
| CATCTGCATGAGTTGAACAA+TGG | 0.658137 | 1.1:+48379424 | MS.gene055902:CDS |
| ACAGAAATTCAGCAAGAACG+AGG | 0.709656 | 1.1:+48380812 | MS.gene055902:CDS |
| ACAGTCACCCATGATACACA+TGG | 0.714461 | 1.1:+48379331 | MS.gene055902:CDS |
| AAGGTTGAGATACTAGAACA+TGG | 0.716208 | 1.1:+48379160 | MS.gene055902:CDS |
| CCAAGCGACGAGTCTAGTAG+CGG | 0.719801 | 1.1:+48379682 | MS.gene055902:CDS |
| GATTCCGAAAGCCTACTCAG+AGG | 0.733180 | 1.1:+48379533 | MS.gene055902:CDS |
| CTGGTGTAAAACGTAAACGG+CGG | 0.772509 | 1.1:+48379605 | MS.gene055902:CDS |
| ACTAAAAGGTAAGATCCGCG+GGG | 0.799147 | 1.1:-48381052 | None:intergenic |
| AAAATGATGAGACTGCCCCG+CGG | 0.836893 | 1.1:+48381037 | MS.gene055902:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAATTAACACAAA+TGG | - | chr1.1:48378321-48378340 | None:intergenic | 10.0% |
| !!! | AAAATAAATTTTATGAGAAA+TGG | - | chr1.1:48380971-48380990 | None:intergenic | 10.0% |
| !!! | TTGTGTTAATTTATTTTATT+TGG | + | chr1.1:48378322-48378341 | MS.gene055902:intron | 10.0% |
| !! | AAAAAATCTTCATTTACTAA+AGG | - | chr1.1:48379803-48379822 | None:intergenic | 15.0% |
| !! | ATATTTAGAAAACACAAATT+TGG | - | chr1.1:48380746-48380765 | None:intergenic | 15.0% |
| !! | TAGATAACTTATTATATTTG+TGG | + | chr1.1:48378524-48378543 | MS.gene055902:intron | 15.0% |
| !! | TTGATAAAATATATACTGTT+AGG | + | chr1.1:48378923-48378942 | MS.gene055902:intron | 15.0% |
| !!! | TTCTCATAAAATTTATTTTG+AGG | + | chr1.1:48380972-48380991 | MS.gene055902:intron | 15.0% |
| !! | AACCAAACATTATACTTTAA+AGG | - | chr1.1:48378505-48378524 | None:intergenic | 20.0% |
| !! | AACTATTGTAATTCATTTCA+TGG | + | chr1.1:48377479-48377498 | MS.gene055902:intron | 20.0% |
| !! | AGTTAATGTAAACAATCATT+TGG | + | chr1.1:48380998-48381017 | MS.gene055902:intron | 20.0% |
| !! | ATAACTTATTATATTTGTGG+TGG | + | chr1.1:48378527-48378546 | MS.gene055902:intron | 20.0% |
| !! | GCAGTTTATTTAAATAGTAA+AGG | - | chr1.1:48378019-48378038 | None:intergenic | 20.0% |
| !! | TGCATTAAATTTATTACTTG+TGG | + | chr1.1:48378800-48378819 | MS.gene055902:intron | 20.0% |
| !! | TTTCTAAATATGATTTATGC+AGG | + | chr1.1:48380755-48380774 | MS.gene055902:intron | 20.0% |
| !!! | AAACATTAATATGCTAGTTT+AGG | + | chr1.1:48377593-48377612 | MS.gene055902:intron | 20.0% |
| !!! | ATGCAAAATATCAACTATTT+TGG | + | chr1.1:48377432-48377451 | MS.gene055902:intron | 20.0% |
| !!! | CAATTTGTTTTATCAAACAA+TGG | - | chr1.1:48380443-48380462 | None:intergenic | 20.0% |
| !!! | GCTTTTTTACATCATATATA+TGG | - | chr1.1:48377781-48377800 | None:intergenic | 20.0% |
| !!! | TACCTTTAAAGTATAATGTT+TGG | + | chr1.1:48378500-48378519 | MS.gene055902:intron | 20.0% |
| !!! | TCAATTCTTTAGTTTTTGTA+TGG | - | chr1.1:48379654-48379673 | None:intergenic | 20.0% |
| !!! | TTTTTAATGGCAATACAAAA+GGG | - | chr1.1:48379845-48379864 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGGCAATACAAA+AGG | - | chr1.1:48379846-48379865 | None:intergenic | 20.0% |
| ! | AAAACACAAATTTGGAAGAA+AGG | - | chr1.1:48380738-48380757 | None:intergenic | 25.0% |
| ! | AAATGTCTCCATTATATTCT+AGG | + | chr1.1:48377753-48377772 | MS.gene055902:intron | 25.0% |
| ! | AATCAAAAAGAACAACTTCT+AGG | - | chr1.1:48378255-48378274 | None:intergenic | 25.0% |
| ! | AATGAAACATGATCATTTCT+AGG | - | chr1.1:48378176-48378195 | None:intergenic | 25.0% |
| ! | AATGTCTCCATTATATTCTA+GGG | + | chr1.1:48377754-48377773 | MS.gene055902:intron | 25.0% |
| ! | ACAGAATAAAGTTTCAGAAA+AGG | - | chr1.1:48380853-48380872 | None:intergenic | 25.0% |
| ! | ACTAATTACTTAATGTGACA+TGG | + | chr1.1:48380913-48380932 | MS.gene055902:intron | 25.0% |
| ! | ATACTCAAGCTTGTAAAAAT+TGG | - | chr1.1:48377550-48377569 | None:intergenic | 25.0% |
| ! | ATCTGGTATAATGAAGATTA+AGG | - | chr1.1:48377914-48377933 | None:intergenic | 25.0% |
| ! | ATGATGTAAAAAAGCTGATT+AGG | + | chr1.1:48377786-48377805 | MS.gene055902:intron | 25.0% |
| ! | ATTGTAATTCATTTCATGGA+TGG | + | chr1.1:48377483-48377502 | MS.gene055902:intron | 25.0% |
| ! | CAAATCAAAATCTGTAGATT+GGG | - | chr1.1:48379137-48379156 | None:intergenic | 25.0% |
| ! | CAAGTCTATTTATTAGCAAA+TGG | + | chr1.1:48378283-48378302 | MS.gene055902:intron | 25.0% |
| ! | CAGATTTAACTGAAAAATAC+AGG | - | chr1.1:48378782-48378801 | None:intergenic | 25.0% |
| ! | CCAAACACTTAAATATGTTA+CGG | - | chr1.1:48377891-48377910 | None:intergenic | 25.0% |
| ! | GATTTAGATTGTGTACTATT+GGG | - | chr1.1:48379289-48379308 | None:intergenic | 25.0% |
| ! | TAAATCCGAAATTAAATCTC+TGG | + | chr1.1:48379303-48379322 | MS.gene055902:CDS | 25.0% |
| ! | TAATATTTGCTTTCATGCTT+TGG | + | chr1.1:48378577-48378596 | MS.gene055902:intron | 25.0% |
| ! | TAGAAATGATCATGTTTCAT+TGG | + | chr1.1:48378175-48378194 | MS.gene055902:CDS | 25.0% |
| ! | TAGTATATTGTCTTGTAAGA+AGG | + | chr1.1:48379462-48379481 | MS.gene055902:CDS | 25.0% |
| ! | TATAAATTCTGCAATTCTGA+AGG | + | chr1.1:48380235-48380254 | MS.gene055902:intron | 25.0% |
| ! | TATATGATAAATGAGCTTAG+AGG | - | chr1.1:48377316-48377335 | None:intergenic | 25.0% |
| ! | TATGAGAAATGGCATATTTA+CGG | - | chr1.1:48380960-48380979 | None:intergenic | 25.0% |
| ! | TATGGTATATTAGTCATGTA+GGG | + | chr1.1:48377715-48377734 | MS.gene055902:intron | 25.0% |
| ! | TTTGAATGACAAAGATGATT+TGG | + | chr1.1:48378698-48378717 | MS.gene055902:CDS | 25.0% |
| !! | TCTGAATTTGAATTTTCCAA+AGG | - | chr1.1:48379202-48379221 | None:intergenic | 25.0% |
| !! | TTTTACTATGATGCTTTCAT+AGG | + | chr1.1:48379069-48379088 | MS.gene055902:intron | 25.0% |
| !!! | AAAGAAAAAGTATCAACTAC+TGG | + | chr1.1:48379586-48379605 | MS.gene055902:CDS | 25.0% |
| !!! | AAGAGGTACTATTTTCTTTT+TGG | + | chr1.1:48379758-48379777 | MS.gene055902:intron | 25.0% |
| !!! | AAGTTTTTGTTTTCTTCTGA+AGG | + | chr1.1:48380654-48380673 | MS.gene055902:CDS | 25.0% |
| !!! | AGAGGTACTATTTTCTTTTT+GGG | + | chr1.1:48379759-48379778 | MS.gene055902:intron | 25.0% |
| !!! | TCAACTATTTTGGAATTAAG+CGG | + | chr1.1:48377442-48377461 | MS.gene055902:intron | 25.0% |
| !!! | TCTACAACTGATTTTGTAAT+TGG | + | chr1.1:48380258-48380277 | MS.gene055902:intron | 25.0% |
| AAAAAAGCTGATTAGGAACT+TGG | + | chr1.1:48377793-48377812 | MS.gene055902:intron | 30.0% | |
| AAAGGACACAGCAATTTAAA+CGG | - | chr1.1:48378882-48378901 | None:intergenic | 30.0% | |
| AAGATCGAAGAAAGAATCAA+AGG | + | chr1.1:48380553-48380572 | MS.gene055902:CDS | 30.0% | |
| AATGATCATGTTTCATTGGA+TGG | + | chr1.1:48378179-48378198 | MS.gene055902:CDS | 30.0% | |
| ACTTCACACATCAATTCATT+AGG | - | chr1.1:48380048-48380067 | None:intergenic | 30.0% | |
| ATATGAAATGCCAAAGAGTA+AGG | + | chr1.1:48377269-48377288 | MS.gene055902:intron | 30.0% | |
| ATATGGACCCTAGAATATAA+TGG | - | chr1.1:48377764-48377783 | None:intergenic | 30.0% | |
| ATCAAATCTTCACGAATCAT+AGG | + | chr1.1:48380875-48380894 | MS.gene055902:intron | 30.0% | |
| ATCATCTTTGTCATTCAAAG+CGG | - | chr1.1:48378697-48378716 | None:intergenic | 30.0% | |
| ATCATTTATCATCTTCATCG+TGG | + | chr1.1:48380173-48380192 | MS.gene055902:intron | 30.0% | |
| ATGGAAATAATTCGTTACAG+TGG | + | chr1.1:48377502-48377521 | MS.gene055902:intron | 30.0% | |
| ATTGTTCATCAACAAGATAC+AGG | - | chr1.1:48378348-48378367 | None:intergenic | 30.0% | |
| CATGCAATTGACATTAGAAT+AGG | - | chr1.1:48378845-48378864 | None:intergenic | 30.0% | |
| CCAAATCAAAATCTGTAGAT+TGG | - | chr1.1:48379138-48379157 | None:intergenic | 30.0% | |
| CCGTAACATATTTAAGTGTT+TGG | + | chr1.1:48377888-48377907 | MS.gene055902:intron | 30.0% | |
| CTTCACACATCAATTCATTA+GGG | - | chr1.1:48380047-48380066 | None:intergenic | 30.0% | |
| GAAAATAGTACCTCTTTCTT+TGG | - | chr1.1:48379754-48379773 | None:intergenic | 30.0% | |
| GATAACTGCATATCAATGTA+AGG | + | chr1.1:48380377-48380396 | MS.gene055902:intron | 30.0% | |
| GATATAACATACATGCAAAC+AGG | - | chr1.1:48378612-48378631 | None:intergenic | 30.0% | |
| GGATTTAGATTGTGTACTAT+TGG | - | chr1.1:48379290-48379309 | None:intergenic | 30.0% | |
| GTATGGTATATTAGTCATGT+AGG | + | chr1.1:48377714-48377733 | MS.gene055902:intron | 30.0% | |
| GTTCTCACAGAATATAACAA+TGG | - | chr1.1:48377632-48377651 | None:intergenic | 30.0% | |
| GTTGAAACAAAATGGTTACA+TGG | + | chr1.1:48380285-48380304 | MS.gene055902:intron | 30.0% | |
| TAAAATGCTGACGTGAAAAA+TGG | + | chr1.1:48378381-48378400 | MS.gene055902:intron | 30.0% | |
| TACATGCAATCTACATTTGA+TGG | - | chr1.1:48379382-48379401 | None:intergenic | 30.0% | |
| TACTCTTTGGCATTTCATAT+TGG | - | chr1.1:48377269-48377288 | None:intergenic | 30.0% | |
| TATATTCACAACCACACAAA+AGG | - | chr1.1:48378900-48378919 | None:intergenic | 30.0% | |
| TGCTTAAATGTGGCAAATTA+TGG | - | chr1.1:48377364-48377383 | None:intergenic | 30.0% | |
| TGTTGGAAAATGTGTCTAAT+GGG | + | chr1.1:48377676-48377695 | MS.gene055902:intron | 30.0% | |
| TTCACACATCAATTCATTAG+GGG | - | chr1.1:48380046-48380065 | None:intergenic | 30.0% | |
| TTCCATTTCATCATCTTGAA+GGG | - | chr1.1:48378132-48378151 | None:intergenic | 30.0% | |
| TTGGCAAAAGAAATTTACGT+AGG | + | chr1.1:48381175-48381194 | MS.gene055902:CDS | 30.0% | |
| TTGTTGGAAAATGTGTCTAA+TGG | + | chr1.1:48377675-48377694 | MS.gene055902:intron | 30.0% | |
| ! | AACAATCATTTGGTGATTGT+AGG | + | chr1.1:48381008-48381027 | MS.gene055902:intron | 30.0% |
| ! | ATTGATGGCATATCTCAATA+TGG | + | chr1.1:48380606-48380625 | MS.gene055902:CDS | 30.0% |
| ! | CTCATCCAGAGATTTAATTT+CGG | - | chr1.1:48379311-48379330 | None:intergenic | 30.0% |
| ! | GATCTCTTTCAAATTTTCCT+AGG | + | chr1.1:48378079-48378098 | MS.gene055902:intron | 30.0% |
| ! | GTTTTACGTTTTCTATGTTC+TGG | + | chr1.1:48379921-48379940 | MS.gene055902:intron | 30.0% |
| ! | TGTATCTTGTTGATGAACAA+TGG | + | chr1.1:48378347-48378366 | MS.gene055902:intron | 30.0% |
| ! | TTGGACAAGTTGAAACAAAA+TGG | + | chr1.1:48380277-48380296 | MS.gene055902:intron | 30.0% |
| !! | GAGGTACTATTTTCTTTTTG+GGG | + | chr1.1:48379760-48379779 | MS.gene055902:intron | 30.0% |
| !!! | CAACTATTTTGGAATTAAGC+GGG | + | chr1.1:48377443-48377462 | MS.gene055902:intron | 30.0% |
| !!! | CCAATCTACAGATTTTGATT+TGG | + | chr1.1:48379135-48379154 | MS.gene055902:intron | 30.0% |
| !!! | TACAGATTTTGATTTGGCAA+AGG | + | chr1.1:48379141-48379160 | MS.gene055902:intron | 30.0% |
| AACAATGGTTATCCTTTAGC+TGG | + | chr1.1:48379439-48379458 | MS.gene055902:CDS | 35.0% | |
| AAGGACCTAATATTCATGTC+TGG | + | chr1.1:48380396-48380415 | MS.gene055902:intron | 35.0% | |
| AAGGTTGAGATACTAGAACA+TGG | + | chr1.1:48379160-48379179 | MS.gene055902:CDS | 35.0% | |
| AATTCAGAAAGTCATTCTCC+AGG | + | chr1.1:48379214-48379233 | MS.gene055902:CDS | 35.0% | |
| AATTTGTCAGAGCTGATTGT+TGG | + | chr1.1:48377659-48377678 | MS.gene055902:intron | 35.0% | |
| AGATTCACCAGTGAAAACTA+TGG | + | chr1.1:48381138-48381157 | MS.gene055902:CDS | 35.0% | |
| AGCATAACGAAGCAAATTCA+TGG | - | chr1.1:48380092-48380111 | None:intergenic | 35.0% | |
| ATATACTGTTAGGTCCTTGA+TGG | + | chr1.1:48378933-48378952 | MS.gene055902:intron | 35.0% | |
| ATGCTTTAACCGATACCATA+TGG | - | chr1.1:48378048-48378067 | None:intergenic | 35.0% | |
| ATTTCATCATCTTGAAGGGA+GGG | - | chr1.1:48378128-48378147 | None:intergenic | 35.0% | |
| CAACTGAAATCCTTACTCTT+TGG | - | chr1.1:48377282-48377301 | None:intergenic | 35.0% | |
| CAGACATACTTGCTTAAATG+TGG | - | chr1.1:48377374-48377393 | None:intergenic | 35.0% | |
| CTACTGGTGTAAAACGTAAA+CGG | + | chr1.1:48379602-48379621 | MS.gene055902:CDS | 35.0% | |
| CTTCCATTTCATCATCTTGA+AGG | - | chr1.1:48378133-48378152 | None:intergenic | 35.0% | |
| GAACATTTGACACCAAAAAG+AGG | + | chr1.1:48380522-48380541 | MS.gene055902:CDS | 35.0% | |
| GAAGAAAGAATCAAAGGATG+TGG | + | chr1.1:48380559-48380578 | MS.gene055902:CDS | 35.0% | |
| GACAATATACTACCAGCTAA+AGG | - | chr1.1:48379454-48379473 | None:intergenic | 35.0% | |
| GGAGATTGTTGAGATATGTA+TGG | + | chr1.1:48377697-48377716 | MS.gene055902:intron | 35.0% | |
| GGTCATTCAACTAGATTTAC+AGG | - | chr1.1:48380025-48380044 | None:intergenic | 35.0% | |
| GTCAAAATATGAAGCTTGTG+AGG | - | chr1.1:48377937-48377956 | None:intergenic | 35.0% | |
| GTGGCAAATTATGGATGAAT+GGG | - | chr1.1:48377355-48377374 | None:intergenic | 35.0% | |
| GTTGACATCAATGATCTTGA+AGG | + | chr1.1:48378984-48379003 | MS.gene055902:CDS | 35.0% | |
| TATCTCCATCAACAATACTC+AGG | - | chr1.1:48378428-48378447 | None:intergenic | 35.0% | |
| TATGATTTATGCAGGACAAG+TGG | + | chr1.1:48380763-48380782 | MS.gene055902:intron | 35.0% | |
| TCTTCAATATACCTCTGAGT+AGG | - | chr1.1:48379547-48379566 | None:intergenic | 35.0% | |
| TGACATTAGAATAGGCACAA+AGG | - | chr1.1:48378837-48378856 | None:intergenic | 35.0% | |
| TGCTTTAACCGATACCATAT+GGG | - | chr1.1:48378047-48378066 | None:intergenic | 35.0% | |
| TGTGGCAAATTATGGATGAA+TGG | - | chr1.1:48377356-48377375 | None:intergenic | 35.0% | |
| ! | CAAAGATGATTTGGAACTAG+AGG | + | chr1.1:48378707-48378726 | MS.gene055902:CDS | 35.0% |
| ! | CAGCAATTTAAACGGATTCA+AGG | - | chr1.1:48378874-48378893 | None:intergenic | 35.0% |
| ! | GAAGTGACAAAGTTGATTGA+TGG | + | chr1.1:48380591-48380610 | MS.gene055902:CDS | 35.0% |
| ! | TATTGTTGATGGAGATAGCT+AGG | + | chr1.1:48378431-48378450 | MS.gene055902:intron | 35.0% |
| ! | TCTACATTTGATGGTTGAGT+TGG | - | chr1.1:48379373-48379392 | None:intergenic | 35.0% |
| ! | TCTTTTGATCTGCCTCTTTT+TGG | - | chr1.1:48380537-48380556 | None:intergenic | 35.0% |
| !! | TAGAGGTACTTGTCTAAACT+CGG | + | chr1.1:48378724-48378743 | MS.gene055902:intron | 35.0% |
| !! | TCTTTTTGTTTCGTCGCTTT+GGG | - | chr1.1:48381119-48381138 | None:intergenic | 35.0% |
| !!! | CGTTTTCTATGTTCTGGTTT+CGG | + | chr1.1:48379927-48379946 | MS.gene055902:intron | 35.0% |
| ACACTAAAAGGTAAGATCCG+CGG | - | chr1.1:48381057-48381076 | None:intergenic | 40.0% | |
| ACAGAAATTCAGCAAGAACG+AGG | + | chr1.1:48380812-48380831 | MS.gene055902:CDS | 40.0% | |
| ACTAGGTGGGATTGATTACA+TGG | + | chr1.1:48377854-48377873 | MS.gene055902:intron | 40.0% | |
| ACTCTCCATCTGACTACAAA+GGG | - | chr1.1:48379877-48379896 | None:intergenic | 40.0% | |
| ACTTGCGCAAATATTCTTCC+CGG | - | chr1.1:48377243-48377262 | None:intergenic | 40.0% | |
| AGTCATTCTCCAGGATTTAG+TGG | + | chr1.1:48379223-48379242 | MS.gene055902:CDS | 40.0% | |
| ATAAACTGCAAGTGCCCATA+TGG | + | chr1.1:48378030-48378049 | MS.gene055902:intron | 40.0% | |
| ATATGAAGCTTGTGAGGATC+TGG | - | chr1.1:48377931-48377950 | None:intergenic | 40.0% | |
| ATGATACACATGGTGTCTTC+AGG | + | chr1.1:48379341-48379360 | MS.gene055902:CDS | 40.0% | |
| ATGTAATCAATCCCACCTAG+TGG | - | chr1.1:48377855-48377874 | None:intergenic | 40.0% | |
| CATTGATGTCAACATCATCC+AGG | - | chr1.1:48378977-48378996 | None:intergenic | 40.0% | |
| CATTTCATCATCTTGAAGGG+AGG | - | chr1.1:48378129-48378148 | None:intergenic | 40.0% | |
| CGAATCATAGGAACTTCAGT+TGG | + | chr1.1:48380887-48380906 | MS.gene055902:intron | 40.0% | |
| CTCCCTTCAAGATGATGAAA+TGG | + | chr1.1:48378127-48378146 | MS.gene055902:CDS | 40.0% | |
| GAAGACACCATGTGTATCAT+GGG | - | chr1.1:48379341-48379360 | None:intergenic | 40.0% | |
| GCAGACCAGACATGAATATT+AGG | - | chr1.1:48380404-48380423 | None:intergenic | 40.0% | |
| GGCATATCTCAATATGGAGT+TGG | + | chr1.1:48380612-48380631 | MS.gene055902:CDS | 40.0% | |
| TACTCTCCATCTGACTACAA+AGG | - | chr1.1:48379878-48379897 | None:intergenic | 40.0% | |
| TATACCTCTGAGTAGGCTTT+CGG | - | chr1.1:48379540-48379559 | None:intergenic | 40.0% | |
| TATGGTCCATCTAGTAGTCT+TGG | + | chr1.1:48381156-48381175 | MS.gene055902:CDS | 40.0% | |
| TGAAGACACCATGTGTATCA+TGG | - | chr1.1:48379342-48379361 | None:intergenic | 40.0% | |
| TGATTCATCAAGCTGAACCT+AGG | - | chr1.1:48378099-48378118 | None:intergenic | 40.0% | |
| TGTCTAAACTCGGTTACTGT+GGG | + | chr1.1:48378734-48378753 | MS.gene055902:intron | 40.0% | |
| TTGTCTAAACTCGGTTACTG+TGG | + | chr1.1:48378733-48378752 | MS.gene055902:intron | 40.0% | |
| TTTAGTGGAAGTAGCACTGT+TGG | + | chr1.1:48379238-48379257 | MS.gene055902:CDS | 40.0% | |
| TTTCGGAATCTCTTCTCTCT+AGG | - | chr1.1:48379523-48379542 | None:intergenic | 40.0% | |
| ! | AATTGCTGTGTCCTTTTGTG+TGG | + | chr1.1:48378886-48378905 | MS.gene055902:intron | 40.0% |
| ! | AGATGGACCATAGTTTTCAC+TGG | - | chr1.1:48381148-48381167 | None:intergenic | 40.0% |
| ! | CATCTGCATGAGTTGAACAA+TGG | + | chr1.1:48379424-48379443 | MS.gene055902:CDS | 40.0% |
| ! | CTTTTGCCAAGACTACTAGA+TGG | - | chr1.1:48381165-48381184 | None:intergenic | 40.0% |
| ! | GATGTTTTCTCCAATGCATG+TGG | + | chr1.1:48379011-48379030 | MS.gene055902:CDS | 40.0% |
| ! | TGGTGTCAAATGTTCATCCT+CGG | - | chr1.1:48380517-48380536 | None:intergenic | 40.0% |
| ! | TTTTCTCCAATGCATGTGGA+GGG | + | chr1.1:48379015-48379034 | MS.gene055902:CDS | 40.0% |
| !! | CAAGAAGCATCCAAAGAAAG+AGG | + | chr1.1:48379741-48379760 | MS.gene055902:CDS | 40.0% |
| !! | CTCTTTTTGTTTCGTCGCTT+TGG | - | chr1.1:48381120-48381139 | None:intergenic | 40.0% |
| !!! | AGGGGGGGCTTTTTTTTTAA+TGG | - | chr1.1:48379858-48379877 | None:intergenic | 40.0% |
| ACAGTCACCCATGATACACA+TGG | + | chr1.1:48379331-48379350 | MS.gene055902:CDS | 45.0% | |
| ACTAAAAGGTAAGATCCGCG+GGG | - | chr1.1:48381055-48381074 | None:intergenic | 45.0% | |
| CACTAAAAGGTAAGATCCGC+GGG | - | chr1.1:48381056-48381075 | None:intergenic | 45.0% | |
| CATCTCCAAGGAATCCATCA+AGG | - | chr1.1:48378950-48378969 | None:intergenic | 45.0% | |
| CTAGTGTGCTTACGTTCATC+AGG | + | chr1.1:48378654-48378673 | MS.gene055902:intron | 45.0% | |
| CTCTCCATCTGACTACAAAG+GGG | - | chr1.1:48379876-48379895 | None:intergenic | 45.0% | |
| CTGGTGTAAAACGTAAACGG+CGG | + | chr1.1:48379605-48379624 | MS.gene055902:CDS | 45.0% | |
| GAAATACCCTCCACATGCAT+TGG | - | chr1.1:48379024-48379043 | None:intergenic | 45.0% | |
| GCTGAATTTCTGTGCAGTAC+AGG | - | chr1.1:48380805-48380824 | None:intergenic | 45.0% | |
| GGAACAGTCATCGAAACACA+GGG | - | chr1.1:48377529-48377548 | None:intergenic | 45.0% | |
| GTCTAAACTCGGTTACTGTG+GGG | + | chr1.1:48378735-48378754 | MS.gene055902:intron | 45.0% | |
| GTGCAGTACAGGCTCTTAAA+AGG | - | chr1.1:48380794-48380813 | None:intergenic | 45.0% | |
| GTTTAGCCAATTCCAGCACT+CGG | - | chr1.1:48381086-48381105 | None:intergenic | 45.0% | |
| TACAGTACCCTGACATCTGT+GGG | - | chr1.1:48380690-48380709 | None:intergenic | 45.0% | |
| TCAATCCCACCTAGTGGAAA+AGG | - | chr1.1:48377849-48377868 | None:intergenic | 45.0% | |
| TCTAAACTCGGTTACTGTGG+GGG | + | chr1.1:48378736-48378755 | MS.gene055902:intron | 45.0% | |
| TCTCCATCTGACTACAAAGG+GGG | - | chr1.1:48379875-48379894 | None:intergenic | 45.0% | |
| TGCAAGTGCCCATATGGTAT+CGG | + | chr1.1:48378036-48378055 | MS.gene055902:intron | 45.0% | |
| TGCTTATGAAGACTCGCCTT+TGG | + | chr1.1:48379183-48379202 | MS.gene055902:CDS | 45.0% | |
| TGGAACAGTCATCGAAACAC+AGG | - | chr1.1:48377530-48377549 | None:intergenic | 45.0% | |
| ! | ACTACCAAGCCTTTTCCACT+AGG | + | chr1.1:48377837-48377856 | MS.gene055902:intron | 45.0% |
| ! | AGGCTTGGTAGTAGTTGTTG+TGG | - | chr1.1:48377829-48377848 | None:intergenic | 45.0% |
| ! | ATTCCTTGGAGATGGATTCC+TGG | + | chr1.1:48378956-48378975 | MS.gene055902:CDS | 45.0% |
| ! | CTCAATATGGAGTTGGTCGA+TGG | + | chr1.1:48380619-48380638 | MS.gene055902:CDS | 45.0% |
| ! | GAGAGCCTGAGTATTGTTGA+TGG | + | chr1.1:48378420-48378439 | MS.gene055902:intron | 45.0% |
| ! | GCGGATCTTACCTTTTAGTG+TGG | + | chr1.1:48381056-48381075 | MS.gene055902:CDS | 45.0% |
| ! | GTTTTCTCCAATGCATGTGG+AGG | + | chr1.1:48379014-48379033 | MS.gene055902:CDS | 45.0% |
| ! | TGACTACGAGCCTTTTTCCT+CGG | + | chr1.1:48380485-48380504 | MS.gene055902:CDS | 45.0% |
| ! | TGTTTCGTCGCTTTGGGTAT+GGG | - | chr1.1:48381113-48381132 | None:intergenic | 45.0% |
| ! | TTGTTTCGTCGCTTTGGGTA+TGG | - | chr1.1:48381114-48381133 | None:intergenic | 45.0% |
| !! | CTTGATGGATTCCTTGGAGA+TGG | + | chr1.1:48378948-48378967 | MS.gene055902:CDS | 45.0% |
| !! | GCATGTGGAGGGTATTTCTT+GGG | + | chr1.1:48379026-48379045 | MS.gene055902:CDS | 45.0% |
| !! | GTGCTACTTCCACTAAATCC+TGG | - | chr1.1:48379235-48379254 | None:intergenic | 45.0% |
| !! | TAGGTCCTTGATGGATTCCT+TGG | + | chr1.1:48378942-48378961 | MS.gene055902:intron | 45.0% |
| !! | TGCATGTGGAGGGTATTTCT+TGG | + | chr1.1:48379025-48379044 | MS.gene055902:CDS | 45.0% |
| !! | TGTGGTGGATAAAGCTGTGT+TGG | + | chr1.1:48378542-48378561 | MS.gene055902:intron | 45.0% |
| AAAATGATGAGACTGCCCCG+CGG | + | chr1.1:48381037-48381056 | MS.gene055902:CDS | 50.0% | |
| AGTGGAAGTAGCACTGTTGG+TGG | + | chr1.1:48379241-48379260 | MS.gene055902:CDS | 50.0% | |
| CATCCAGGAATCCATCTCCA+AGG | - | chr1.1:48378962-48378981 | None:intergenic | 50.0% | |
| CGGAATCTCTTCTCTCTAGG+TGG | - | chr1.1:48379520-48379539 | None:intergenic | 50.0% | |
| CTCCATCTGACTACAAAGGG+GGG | - | chr1.1:48379874-48379893 | None:intergenic | 50.0% | |
| CTCCTCTCTTTGCCTGAACA+GGG | + | chr1.1:48380115-48380134 | MS.gene055902:intron | 50.0% | |
| CTGTTCAGGCAAAGAGAGGA+GGG | - | chr1.1:48380116-48380135 | None:intergenic | 50.0% | |
| GATTCCGAAAGCCTACTCAG+AGG | + | chr1.1:48379533-48379552 | MS.gene055902:CDS | 50.0% | |
| GTACAGTACCCTGACATCTG+TGG | - | chr1.1:48380691-48380710 | None:intergenic | 50.0% | |
| GTGGAAGTAGCACTGTTGGT+GGG | + | chr1.1:48379242-48379261 | MS.gene055902:CDS | 50.0% | |
| TCCATCTGACTACAAAGGGG+GGG | - | chr1.1:48379873-48379892 | None:intergenic | 50.0% | |
| TCCTCTCTTTGCCTGAACAG+GGG | + | chr1.1:48380116-48380135 | MS.gene055902:intron | 50.0% | |
| TCGGACTCTTCCGAGGAAAA+AGG | - | chr1.1:48380498-48380517 | None:intergenic | 50.0% | |
| ! | ACCAAGCCTTTTCCACTAGG+TGG | + | chr1.1:48377840-48377859 | MS.gene055902:intron | 50.0% |
| ! | ACTCGGCTAGCCACACTAAA+AGG | - | chr1.1:48381069-48381088 | None:intergenic | 50.0% |
| ! | CCAAGCCTTTTCCACTAGGT+GGG | + | chr1.1:48377841-48377860 | MS.gene055902:intron | 50.0% |
| ! | TTTTTCCTCGGAAGAGTCCG+AGG | + | chr1.1:48380497-48380516 | MS.gene055902:CDS | 50.0% |
| ACCGAACTCCCACAGATGTC+AGG | + | chr1.1:48380679-48380698 | MS.gene055902:CDS | 55.0% | |
| ATGAAGCCAAGCCCCTGTTC+AGG | - | chr1.1:48380130-48380149 | None:intergenic | 55.0% | |
| CCAAGCGACGAGTCTAGTAG+CGG | + | chr1.1:48379682-48379701 | MS.gene055902:CDS | 55.0% | |
| CCCACCTAGTGGAAAAGGCT+TGG | - | chr1.1:48377844-48377863 | None:intergenic | 55.0% | |
| CCCTGACATCTGTGGGAGTT+CGG | - | chr1.1:48380683-48380702 | None:intergenic | 55.0% | |
| CCGAACTCCCACAGATGTCA+GGG | + | chr1.1:48380680-48380699 | MS.gene055902:CDS | 55.0% | |
| CCTCCTCTCTTTGCCTGAAC+AGG | + | chr1.1:48380114-48380133 | MS.gene055902:intron | 55.0% | |
| CCTGTTCAGGCAAAGAGAGG+AGG | - | chr1.1:48380117-48380136 | None:intergenic | 55.0% | |
| TCTTTGCCTGAACAGGGGCT+TGG | + | chr1.1:48380121-48380140 | MS.gene055902:intron | 55.0% | |
| TTCATCCTCGGACTCTTCCG+AGG | - | chr1.1:48380505-48380524 | None:intergenic | 55.0% | |
| CCGCTACTAGACTCGTCGCT+TGG | - | chr1.1:48379685-48379704 | None:intergenic | 60.0% | |
| GCCCCCCCTTTGTAGTCAGA+TGG | + | chr1.1:48379869-48379888 | MS.gene055902:intron | 60.0% | |
| GCCCCTGTTCAGGCAAAGAG+AGG | - | chr1.1:48380120-48380139 | None:intergenic | 60.0% | |
| ! | TAGTGTGGCTAGCCGAGTGC+TGG | + | chr1.1:48381071-48381090 | MS.gene055902:CDS | 60.0% |
| !! | GGCTAGCCGAGTGCTGGAAT+TGG | + | chr1.1:48381077-48381096 | MS.gene055902:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 48377235 | 48381212 | 48377235 | ID=MS.gene055902 |
| chr1.1 | mRNA | 48377235 | 48381212 | 48377235 | ID=MS.gene055902.t1;Parent=MS.gene055902 |
| chr1.1 | exon | 48377235 | 48377285 | 48377235 | ID=MS.gene055902.t1.exon1;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48377235 | 48377285 | 48377235 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48378101 | 48378200 | 48378101 | ID=MS.gene055902.t1.exon2;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48378101 | 48378200 | 48378101 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48378676 | 48378728 | 48378676 | ID=MS.gene055902.t1.exon3;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48378676 | 48378728 | 48378676 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48378945 | 48379047 | 48378945 | ID=MS.gene055902.t1.exon4;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48378945 | 48379047 | 48378945 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48379146 | 48379762 | 48379146 | ID=MS.gene055902.t1.exon5;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48379146 | 48379762 | 48379146 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48380474 | 48380701 | 48380474 | ID=MS.gene055902.t1.exon6;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48380474 | 48380701 | 48380474 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48380777 | 48380833 | 48380777 | ID=MS.gene055902.t1.exon7;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48380777 | 48380833 | 48380777 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| chr1.1 | exon | 48381030 | 48381212 | 48381030 | ID=MS.gene055902.t1.exon8;Parent=MS.gene055902.t1 |
| chr1.1 | CDS | 48381030 | 48381212 | 48381030 | ID=cds.MS.gene055902.t1;Parent=MS.gene055902.t1 |
| Gene Sequence |
| Protein sequence |
