Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064486.t1 | XP_003590460.1 | 97.4 | 463 | 12 | 0 | 1 | 463 | 1 | 463 | 7.80E-246 | 859.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064486.t1 | G7IA94 | 97.4 | 463 | 12 | 0 | 1 | 463 | 1 | 463 | 5.6e-246 | 859.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene064486.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055902 | MS.gene064486 | 0.854583 | 1.12E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064486.t1 | MTR_1g063940 | 97.624 | 463 | 11 | 0 | 1 | 463 | 1 | 463 | 0.0 | 935 |
| MS.gene064486.t1 | MTR_1g063940 | 95.966 | 471 | 11 | 1 | 1 | 463 | 1 | 471 | 0.0 | 930 |
| MS.gene064486.t1 | MTR_1g063940 | 97.408 | 463 | 11 | 1 | 1 | 463 | 1 | 462 | 0.0 | 929 |
| MS.gene064486.t1 | MTR_8g020330 | 39.370 | 127 | 72 | 3 | 318 | 443 | 523 | 645 | 1.01e-17 | 86.3 |
| MS.gene064486.t1 | MTR_8g020330 | 39.370 | 127 | 72 | 3 | 318 | 443 | 518 | 640 | 1.06e-17 | 86.3 |
| MS.gene064486.t1 | MTR_8g020330 | 39.370 | 127 | 72 | 3 | 318 | 443 | 522 | 644 | 1.08e-17 | 86.3 |
| MS.gene064486.t1 | MTR_8g020330 | 39.370 | 127 | 72 | 3 | 318 | 443 | 527 | 649 | 1.12e-17 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064486.t1 | AT2G37025 | 50.000 | 114 | 56 | 1 | 321 | 433 | 271 | 384 | 1.12e-30 | 123 |
| MS.gene064486.t1 | AT2G37025 | 50.000 | 114 | 56 | 1 | 321 | 433 | 271 | 384 | 1.12e-30 | 123 |
| MS.gene064486.t1 | AT2G37025 | 50.000 | 114 | 56 | 1 | 321 | 433 | 271 | 384 | 1.12e-30 | 123 |
| MS.gene064486.t1 | AT1G72650 | 47.826 | 92 | 47 | 1 | 337 | 428 | 530 | 620 | 2.36e-20 | 94.4 |
| MS.gene064486.t1 | AT1G72650 | 47.826 | 92 | 47 | 1 | 337 | 428 | 536 | 626 | 2.42e-20 | 94.4 |
| MS.gene064486.t1 | AT1G17460 | 28.623 | 276 | 125 | 8 | 231 | 442 | 327 | 594 | 3.47e-18 | 87.8 |
| MS.gene064486.t1 | AT1G17460 | 28.623 | 276 | 125 | 8 | 231 | 442 | 306 | 573 | 3.82e-18 | 87.4 |
| MS.gene064486.t1 | AT1G17460 | 28.623 | 276 | 125 | 8 | 231 | 442 | 347 | 614 | 4.18e-18 | 87.4 |
Find 89 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATAGTACCTCTTTCTT+TGG | 0.210015 | 1.4:-52484044 | None:intergenic |
| AATGAAACATGATCATTTCT+AGG | 0.222946 | 1.4:-52482468 | None:intergenic |
| TACTCTTTGGCATTTCATAT+TGG | 0.278595 | 1.4:-52481561 | None:intergenic |
| GTGCAGTACAGGCTCTTAAA+AGG | 0.298577 | 1.4:-52485086 | None:intergenic |
| GACAATATACTACCAGTTAA+AGG | 0.305667 | 1.4:-52483744 | None:intergenic |
| ACTCGGCTAGCCACACTAAA+AGG | 0.320293 | 1.4:-52485361 | None:intergenic |
| GGATTTAGATTGTGTACTAT+TGG | 0.323521 | 1.4:-52483580 | None:intergenic |
| TTTGAATGACAAAGATGATT+TGG | 0.323845 | 1.4:+52482991 | MS.gene064486:CDS |
| AACAATGGTTATCCTTTAAC+TGG | 0.328692 | 1.4:+52483732 | MS.gene064486:CDS |
| TCGGACTCTTCCGAGGAAAA+AGG | 0.330555 | 1.4:-52484790 | None:intergenic |
| TTGTTTCGTCGCTTTGGGTA+TGG | 0.332970 | 1.4:-52485406 | None:intergenic |
| GATTTAGATTGTGTACTATT+GGG | 0.352272 | 1.4:-52483579 | None:intergenic |
| CTCATCCAGAGATTTAATTT+CGG | 0.364384 | 1.4:-52483601 | None:intergenic |
| ATATACTGTTAGGTCCTTGA+TGG | 0.365380 | 1.4:+52483226 | MS.gene064486:intron |
| CTTGATGGATTCCTTGGAGA+TGG | 0.383282 | 1.4:+52483241 | MS.gene064486:CDS |
| TAGAAATGATCATGTTTCAT+TGG | 0.391808 | 1.4:+52482470 | MS.gene064486:CDS |
| CTTCCATTTCATCATCTTGA+AGG | 0.397158 | 1.4:-52482425 | None:intergenic |
| TAGGTCCTTGATGGATTCCT+TGG | 0.398304 | 1.4:+52483235 | MS.gene064486:intron |
| TGTTTCGTCGCTTTGGGTAT+GGG | 0.398644 | 1.4:-52485405 | None:intergenic |
| TGCTTATGAAGACTCGCCTT+TGG | 0.398646 | 1.4:+52483476 | MS.gene064486:CDS |
| TAAATCCGAAATTAAATCTC+TGG | 0.403561 | 1.4:+52483596 | MS.gene064486:CDS |
| GTGCTACTTCCACTAAATTC+TGG | 0.405349 | 1.4:-52483525 | None:intergenic |
| TGCATGTGGAGGGTATTTCT+TGG | 0.407708 | 1.4:+52483318 | MS.gene064486:CDS |
| TACATGCAATCTACATTTGA+TGG | 0.413497 | 1.4:-52483672 | None:intergenic |
| AGTCATTCTCCAGAATTTAG+TGG | 0.419103 | 1.4:+52483516 | MS.gene064486:CDS |
| ATTCCTTGGAGATGGATTCC+TGG | 0.426741 | 1.4:+52483249 | MS.gene064486:CDS |
| TCTACATTTGATGGTTGAGT+TGG | 0.429648 | 1.4:-52483663 | None:intergenic |
| ATTGATGGCATATCTCAATA+TGG | 0.429927 | 1.4:+52484901 | MS.gene064486:CDS |
| CCCTGACATCTGTGGGAGTT+CGG | 0.437149 | 1.4:-52484975 | None:intergenic |
| TATACCTCTGAGTAGGCTTT+CGG | 0.437182 | 1.4:-52483830 | None:intergenic |
| ACCGAACTCCCACAGATGTC+AGG | 0.442198 | 1.4:+52484974 | MS.gene064486:CDS |
| AATGATCATGTTTCATTGGA+TGG | 0.447117 | 1.4:+52482474 | MS.gene064486:CDS |
| CACTAAAAGGTAAGATCCGC+GGG | 0.452158 | 1.4:-52485348 | None:intergenic |
| GCATGTGGAGGGTATTTCTT+GGG | 0.460808 | 1.4:+52483319 | MS.gene064486:CDS |
| TTTCGGAATCTCTTCTCTCT+AGG | 0.461041 | 1.4:-52483813 | None:intergenic |
| TAGTGTGGCTAGCCGAGTGC+TGG | 0.464765 | 1.4:+52485366 | MS.gene064486:CDS |
| ATGATACACATGGTGTCTTC+AGG | 0.468776 | 1.4:+52483634 | MS.gene064486:CDS |
| GTCCCTTCAAGATGATGAAA+TGG | 0.473416 | 1.4:+52482422 | MS.gene064486:CDS |
| ACTTGCGCAAATATTCTTCC+CGG | 0.477272 | 1.4:-52481535 | None:intergenic |
| GGCTAGCCGAGTGCTGGAAT+TGG | 0.480997 | 1.4:+52485372 | MS.gene064486:CDS |
| GCTGAATTTCTGTGCAGTAC+AGG | 0.484370 | 1.4:-52485097 | None:intergenic |
| CCGCTACTAGACTCGTCGCT+TGG | 0.485164 | 1.4:-52483975 | None:intergenic |
| CTACTGGTGTAAAACGTAAA+CGG | 0.490582 | 1.4:+52483895 | MS.gene064486:CDS |
| CAAGAGAATATGCGATGGAC+CGG | 0.494472 | 1.4:+52481516 | None:intergenic |
| TATGGTCCATCTAGTAGTCT+TGG | 0.496122 | 1.4:+52485451 | MS.gene064486:CDS |
| GAAGAAAGAATCAAAGGATG+TGG | 0.504028 | 1.4:+52484854 | MS.gene064486:CDS |
| TGGTGTCAAATGTTCATCCT+CGG | 0.505342 | 1.4:-52484809 | None:intergenic |
| GGCATATCTCAATATGGAGT+TGG | 0.506463 | 1.4:+52484907 | MS.gene064486:CDS |
| GAAATACCCTCCACATGCAT+TGG | 0.510672 | 1.4:-52483314 | None:intergenic |
| CTCAATATGGAGTTGGTCGA+TGG | 0.518114 | 1.4:+52484914 | MS.gene064486:CDS |
| TTCCATTTCATCATCTTGAA+GGG | 0.522028 | 1.4:-52482424 | None:intergenic |
| AGATTCACCAGTGAAAACTA+TGG | 0.522871 | 1.4:+52485433 | MS.gene064486:CDS |
| GTTGACATCAATGATCTTGA+AGG | 0.524785 | 1.4:+52483277 | MS.gene064486:CDS |
| TGAAGACACCATGTGTATCA+TGG | 0.526838 | 1.4:-52483632 | None:intergenic |
| GAAGTGGCAAAGTTGATTGA+TGG | 0.533603 | 1.4:+52484886 | MS.gene064486:CDS |
| TAGTATATTGTCTTGTAAGA+AGG | 0.534253 | 1.4:+52483755 | MS.gene064486:CDS |
| CAAGAAGCATCCAAAGAAAG+AGG | 0.542469 | 1.4:+52484034 | MS.gene064486:CDS |
| TTTAGTGGAAGTAGCACTGT+TGG | 0.552863 | 1.4:+52483531 | MS.gene064486:CDS |
| ATTTCATCATCTTGAAGGGA+CGG | 0.555835 | 1.4:-52482420 | None:intergenic |
| AAGATCGAAGAAAGAATCAA+AGG | 0.561345 | 1.4:+52484848 | MS.gene064486:CDS |
| CGGAATCTCTTCTCTCTAGG+TGG | 0.568097 | 1.4:-52483810 | None:intergenic |
| CATTGATGTCAACATCATCC+AGG | 0.573797 | 1.4:-52483267 | None:intergenic |
| AGTGGAAGTAGCACTGTTGG+TGG | 0.573972 | 1.4:+52483534 | MS.gene064486:CDS |
| TCTTCAATATACCTCTGAGT+AGG | 0.580112 | 1.4:-52483837 | None:intergenic |
| GTTTAGCCAATTCCAGCACT+CGG | 0.584124 | 1.4:-52485378 | None:intergenic |
| GTGGAAGTAGCACTGTTGGT+GGG | 0.586298 | 1.4:+52483535 | MS.gene064486:CDS |
| CAAAGATGATTTGGAACTAG+AGG | 0.590374 | 1.4:+52483000 | MS.gene064486:CDS |
| CATCTCCAAGGAATCCATCA+AGG | 0.593123 | 1.4:-52483240 | None:intergenic |
| AAGAGAATATGCGATGGACC+GGG | 0.599053 | 1.4:+52481517 | None:intergenic |
| TACAGTACCCTGACATCTGT+GGG | 0.600151 | 1.4:-52484982 | None:intergenic |
| TTCATCCTCGGACTCTTCCG+AGG | 0.613472 | 1.4:-52484797 | None:intergenic |
| ATCATCTTTGTCATTCAAAG+CGG | 0.620385 | 1.4:-52482987 | None:intergenic |
| CCGAACTCCCACAGATGTCA+GGG | 0.622447 | 1.4:+52484975 | MS.gene064486:CDS |
| GAAGACACCATGTGTATCAT+GGG | 0.623115 | 1.4:-52483631 | None:intergenic |
| TATGATTTATGCAGGACAAG+TGG | 0.628551 | 1.4:+52485058 | MS.gene064486:intron |
| GTACAGTACCCTGACATCTG+TGG | 0.628681 | 1.4:-52484983 | None:intergenic |
| TTGGCAAAAGAAATTTACGT+AGG | 0.641798 | 1.4:+52485470 | MS.gene064486:CDS |
| CATCCAGGAATCCATCTCCA+AGG | 0.645479 | 1.4:-52483252 | None:intergenic |
| ACACTAAAAGGTAAGATCCG+CGG | 0.650416 | 1.4:-52485349 | None:intergenic |
| GATGTGGACAGTCTCTGAAG+TGG | 0.651079 | 1.4:+52484870 | MS.gene064486:CDS |
| CATCTGCATGAGTTGAACAA+TGG | 0.658137 | 1.4:+52483717 | MS.gene064486:CDS |
| ACAGAAATTCAGCAAGAACG+AGG | 0.709656 | 1.4:+52485107 | MS.gene064486:CDS |
| ACAGTCACCCATGATACACA+TGG | 0.714461 | 1.4:+52483624 | MS.gene064486:CDS |
| AAGGTTGAGATACTAGAACA+TGG | 0.716208 | 1.4:+52483453 | MS.gene064486:CDS |
| CCAAGCGACGAGTCTAGTAG+CGG | 0.719801 | 1.4:+52483975 | MS.gene064486:CDS |
| GATTCCGAAAGCCTACTCAG+AGG | 0.733180 | 1.4:+52483826 | MS.gene064486:CDS |
| CTGGTGTAAAACGTAAACGG+CGG | 0.772509 | 1.4:+52483898 | MS.gene064486:CDS |
| ACTAAAAGGTAAGATCCGCG+GGG | 0.799147 | 1.4:-52485347 | None:intergenic |
| AAAATGATGAGACTGCCCCG+CGG | 0.836893 | 1.4:+52485332 | MS.gene064486:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAATTAACACAAA+TGG | - | chr1.4:52482616-52482635 | None:intergenic | 10.0% |
| !!! | AAAATAAATTTTATGAGAAA+TGG | - | chr1.4:52485266-52485285 | None:intergenic | 10.0% |
| !!! | TTGTGTTAATTTATTTTATT+TGG | + | chr1.4:52482617-52482636 | MS.gene064486:intron | 10.0% |
| !! | ATAACTTATTATATTTGTGA+TGG | + | chr1.4:52482822-52482841 | MS.gene064486:intron | 15.0% |
| !! | ATATTTAGAAAACACAAATT+TGG | - | chr1.4:52485041-52485060 | None:intergenic | 15.0% |
| !! | TGCATTAAATTTATTACTTA+TGG | + | chr1.4:52483093-52483112 | MS.gene064486:intron | 15.0% |
| !! | TTGATAAAATATATACTGTT+AGG | + | chr1.4:52483216-52483235 | MS.gene064486:intron | 15.0% |
| !!! | AACCAAACATTATATTTTAA+AGG | - | chr1.4:52482800-52482819 | None:intergenic | 15.0% |
| !!! | ATGTAAAATATCAACTATTT+TGG | + | chr1.4:52481727-52481746 | MS.gene064486:intron | 15.0% |
| !!! | TACCTTTAAAATATAATGTT+TGG | + | chr1.4:52482795-52482814 | MS.gene064486:intron | 15.0% |
| !!! | TTCTCATAAAATTTATTTTG+AGG | + | chr1.4:52485267-52485286 | MS.gene064486:intron | 15.0% |
| !! | AAAAAACCTTCATTTACTAA+AGG | - | chr1.4:52484096-52484115 | None:intergenic | 20.0% |
| !! | AACTATTGTAATTCATTTCA+TGG | + | chr1.4:52481774-52481793 | MS.gene064486:intron | 20.0% |
| !! | AGTTAATGTAAACAATCATT+TGG | + | chr1.4:52485293-52485312 | MS.gene064486:intron | 20.0% |
| !! | ATATTTCCTTTAGTAAATGA+AGG | + | chr1.4:52484087-52484106 | MS.gene064486:intron | 20.0% |
| !! | GCAGTTTATTTAAATAGTAA+AGG | - | chr1.4:52482314-52482333 | None:intergenic | 20.0% |
| !! | TTTCTAAATATGATTTATGC+AGG | + | chr1.4:52485050-52485069 | MS.gene064486:intron | 20.0% |
| !!! | AAACATTAATATGCTAGTTT+AGG | + | chr1.4:52481888-52481907 | MS.gene064486:intron | 20.0% |
| !!! | CAATTTGTTTTATCAAACAA+CGG | - | chr1.4:52484738-52484757 | None:intergenic | 20.0% |
| !!! | GCTTTTTTACATCATATATA+TGG | - | chr1.4:52482076-52482095 | None:intergenic | 20.0% |
| !!! | TCAATTCTTTAGTTTTTGTA+TGG | - | chr1.4:52483947-52483966 | None:intergenic | 20.0% |
| !!! | TTTTTAATGGCAATACAAAA+GGG | - | chr1.4:52484139-52484158 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGGCAATACAAA+AGG | - | chr1.4:52484140-52484159 | None:intergenic | 20.0% |
| ! | AAAACACAAATTTGGAAGAA+AGG | - | chr1.4:52485033-52485052 | None:intergenic | 25.0% |
| ! | AAATGTCTCCATTATATTCT+AGG | + | chr1.4:52482048-52482067 | MS.gene064486:intron | 25.0% |
| ! | AATCAAAAAGAACAACTTCT+AGG | - | chr1.4:52482550-52482569 | None:intergenic | 25.0% |
| ! | AATGAAACATGATCATTTCT+AGG | - | chr1.4:52482471-52482490 | None:intergenic | 25.0% |
| ! | AATGTCTCCATTATATTCTA+GGG | + | chr1.4:52482049-52482068 | MS.gene064486:intron | 25.0% |
| ! | ACAGAATAAAGTTTCAGAAA+AGG | - | chr1.4:52485148-52485167 | None:intergenic | 25.0% |
| ! | ACTAATTACTTAATGTGACA+TGG | + | chr1.4:52485208-52485227 | MS.gene064486:intron | 25.0% |
| ! | ATACTCAAGCTTGTAAAAAT+TGG | - | chr1.4:52481845-52481864 | None:intergenic | 25.0% |
| ! | ATCTGGTATATTGAAGATTA+AGG | - | chr1.4:52482209-52482228 | None:intergenic | 25.0% |
| ! | ATGATGTAAAAAAGCTGATT+AGG | + | chr1.4:52482081-52482100 | MS.gene064486:intron | 25.0% |
| ! | ATTGTAATTCATTTCATGGA+TGG | + | chr1.4:52481778-52481797 | MS.gene064486:intron | 25.0% |
| ! | CAAATCAAAATCTGTAGATT+GGG | - | chr1.4:52483430-52483449 | None:intergenic | 25.0% |
| ! | CAAGTCTATTTATTAGCAAA+TGG | + | chr1.4:52482578-52482597 | MS.gene064486:intron | 25.0% |
| ! | CAGATTTAACTGAAAAATAC+AGG | - | chr1.4:52483075-52483094 | None:intergenic | 25.0% |
| ! | CCAAACACTTAAATATGTTA+CGG | - | chr1.4:52482186-52482205 | None:intergenic | 25.0% |
| ! | GATATAACATACATGTAAAC+AGG | - | chr1.4:52482907-52482926 | None:intergenic | 25.0% |
| ! | GATTTAGATTGTGTACTATT+GGG | - | chr1.4:52483582-52483601 | None:intergenic | 25.0% |
| ! | TAAATCCGAAATTAAATCTC+TGG | + | chr1.4:52483596-52483615 | MS.gene064486:CDS | 25.0% |
| ! | TAATATTTGCTTTCATGCTT+TGG | + | chr1.4:52482872-52482891 | MS.gene064486:intron | 25.0% |
| ! | TAGAAATGATCATGTTTCAT+TGG | + | chr1.4:52482470-52482489 | MS.gene064486:CDS | 25.0% |
| ! | TAGTATATTGTCTTGTAAGA+AGG | + | chr1.4:52483755-52483774 | MS.gene064486:CDS | 25.0% |
| ! | TATAAATTCTGCAATTCTGA+AGG | + | chr1.4:52484530-52484549 | MS.gene064486:intron | 25.0% |
| ! | TATATGATAAATGAGCTTAG+AGG | - | chr1.4:52481611-52481630 | None:intergenic | 25.0% |
| ! | TATGAGAAATGGCATATTTA+CGG | - | chr1.4:52485255-52485274 | None:intergenic | 25.0% |
| ! | TATGGTATATTAGTCATGTA+GGG | + | chr1.4:52482010-52482029 | MS.gene064486:intron | 25.0% |
| ! | TTTGAATGACAAAGATGATT+TGG | + | chr1.4:52482991-52483010 | MS.gene064486:CDS | 25.0% |
| !! | TCTGAATTTGAATTTTCCAA+AGG | - | chr1.4:52483495-52483514 | None:intergenic | 25.0% |
| !! | TTTTACTATGATGCTTTCAT+AGG | + | chr1.4:52483362-52483381 | MS.gene064486:intron | 25.0% |
| !!! | AAAGAAAAAGTATCAACTAC+TGG | + | chr1.4:52483879-52483898 | MS.gene064486:CDS | 25.0% |
| !!! | AAGAGGTACTATTTTCTTTT+TGG | + | chr1.4:52484051-52484070 | MS.gene064486:intron | 25.0% |
| !!! | AAGTTTTTGTTTTCTTCTGA+AGG | + | chr1.4:52484949-52484968 | MS.gene064486:CDS | 25.0% |
| !!! | AGAGGTACTATTTTCTTTTT+GGG | + | chr1.4:52484052-52484071 | MS.gene064486:intron | 25.0% |
| !!! | TCAACTATTTTGGAATTAAG+CGG | + | chr1.4:52481737-52481756 | MS.gene064486:intron | 25.0% |
| !!! | TCTACAACTGATTTTGTAAT+TGG | + | chr1.4:52484553-52484572 | MS.gene064486:intron | 25.0% |
| AAAAAAGCTGATTAGGAACT+TGG | + | chr1.4:52482088-52482107 | MS.gene064486:intron | 30.0% | |
| AAAGGACACAGCAATTTAAA+CGG | - | chr1.4:52483175-52483194 | None:intergenic | 30.0% | |
| AACAATGGTTATCCTTTAAC+TGG | + | chr1.4:52483732-52483751 | MS.gene064486:CDS | 30.0% | |
| AAGATCGAAGAAAGAATCAA+AGG | + | chr1.4:52484848-52484867 | MS.gene064486:CDS | 30.0% | |
| AATGATCATGTTTCATTGGA+TGG | + | chr1.4:52482474-52482493 | MS.gene064486:CDS | 30.0% | |
| ACTTCACACATCAATTCATT+AGG | - | chr1.4:52484343-52484362 | None:intergenic | 30.0% | |
| ATATGAAATGCCAAAGAGTA+AGG | + | chr1.4:52481564-52481583 | MS.gene064486:intron | 30.0% | |
| ATATGGACCCTAGAATATAA+TGG | - | chr1.4:52482059-52482078 | None:intergenic | 30.0% | |
| ATCAAATCTTCACGAATCAT+AGG | + | chr1.4:52485170-52485189 | MS.gene064486:intron | 30.0% | |
| ATCATCTTTGTCATTCAAAG+CGG | - | chr1.4:52482990-52483009 | None:intergenic | 30.0% | |
| ATCATTTATCATCTTCATCG+TGG | + | chr1.4:52484468-52484487 | MS.gene064486:intron | 30.0% | |
| ATGGAAATAATTCGTTACAG+TGG | + | chr1.4:52481797-52481816 | MS.gene064486:intron | 30.0% | |
| ATTGTTCATCAACAAGATAC+AGG | - | chr1.4:52482643-52482662 | None:intergenic | 30.0% | |
| CATGCAATTGACATTAGAAT+AGG | - | chr1.4:52483138-52483157 | None:intergenic | 30.0% | |
| CCAAATCAAAATCTGTAGAT+TGG | - | chr1.4:52483431-52483450 | None:intergenic | 30.0% | |
| CCGTAACATATTTAAGTGTT+TGG | + | chr1.4:52482183-52482202 | MS.gene064486:intron | 30.0% | |
| CTTCACACATCAATTCATTA+GGG | - | chr1.4:52484342-52484361 | None:intergenic | 30.0% | |
| GAAAATAGTACCTCTTTCTT+TGG | - | chr1.4:52484047-52484066 | None:intergenic | 30.0% | |
| GACAATATACTACCAGTTAA+AGG | - | chr1.4:52483747-52483766 | None:intergenic | 30.0% | |
| GATAACTGCATATCAATGTA+AGG | + | chr1.4:52484672-52484691 | MS.gene064486:intron | 30.0% | |
| GGATTTAGATTGTGTACTAT+TGG | - | chr1.4:52483583-52483602 | None:intergenic | 30.0% | |
| GTATGGTATATTAGTCATGT+AGG | + | chr1.4:52482009-52482028 | MS.gene064486:intron | 30.0% | |
| GTTCTCACAGAATATAACAA+TGG | - | chr1.4:52481927-52481946 | None:intergenic | 30.0% | |
| GTTGAAACAAAATGGTTACA+TGG | + | chr1.4:52484580-52484599 | MS.gene064486:intron | 30.0% | |
| TAAAATGCTGACGTGAAAAA+TGG | + | chr1.4:52482676-52482695 | MS.gene064486:intron | 30.0% | |
| TACATGCAATCTACATTTGA+TGG | - | chr1.4:52483675-52483694 | None:intergenic | 30.0% | |
| TACTCTTTGGCATTTCATAT+TGG | - | chr1.4:52481564-52481583 | None:intergenic | 30.0% | |
| TATATTCACAACCACACAAA+AGG | - | chr1.4:52483193-52483212 | None:intergenic | 30.0% | |
| TGCTTAAATGTGGCAAATTA+TGG | - | chr1.4:52481659-52481678 | None:intergenic | 30.0% | |
| TGTTGGAAAATGTGTCTAAT+GGG | + | chr1.4:52481971-52481990 | MS.gene064486:intron | 30.0% | |
| TTCACACATCAATTCATTAG+GGG | - | chr1.4:52484341-52484360 | None:intergenic | 30.0% | |
| TTCCATTTCATCATCTTGAA+GGG | - | chr1.4:52482427-52482446 | None:intergenic | 30.0% | |
| TTGGCAAAAGAAATTTACGT+AGG | + | chr1.4:52485470-52485489 | MS.gene064486:CDS | 30.0% | |
| TTGTTGGAAAATGTGTCTAA+TGG | + | chr1.4:52481970-52481989 | MS.gene064486:intron | 30.0% | |
| ! | AACAATCATTTGGTGATTGT+AGG | + | chr1.4:52485303-52485322 | MS.gene064486:intron | 30.0% |
| ! | ATTGATGGCATATCTCAATA+TGG | + | chr1.4:52484901-52484920 | MS.gene064486:CDS | 30.0% |
| ! | CTCATCCAGAGATTTAATTT+CGG | - | chr1.4:52483604-52483623 | None:intergenic | 30.0% |
| ! | GATCTCTTTCAAATTTTCCT+AGG | + | chr1.4:52482374-52482393 | MS.gene064486:intron | 30.0% |
| ! | GTTTTACGTTTTCTATGTTC+TGG | + | chr1.4:52484216-52484235 | MS.gene064486:intron | 30.0% |
| ! | TGTATCTTGTTGATGAACAA+TGG | + | chr1.4:52482642-52482661 | MS.gene064486:intron | 30.0% |
| ! | TTGGACAAGTTGAAACAAAA+TGG | + | chr1.4:52484572-52484591 | MS.gene064486:intron | 30.0% |
| !! | GAGGTACTATTTTCTTTTTG+GGG | + | chr1.4:52484053-52484072 | MS.gene064486:intron | 30.0% |
| !!! | CAACTATTTTGGAATTAAGC+GGG | + | chr1.4:52481738-52481757 | MS.gene064486:intron | 30.0% |
| !!! | CCAATCTACAGATTTTGATT+TGG | + | chr1.4:52483428-52483447 | MS.gene064486:intron | 30.0% |
| !!! | TACAGATTTTGATTTGGCAA+AGG | + | chr1.4:52483434-52483453 | MS.gene064486:intron | 30.0% |
| AAGGACCTAATATTCATGTC+TGG | + | chr1.4:52484691-52484710 | MS.gene064486:intron | 35.0% | |
| AAGGTTGAGATACTAGAACA+TGG | + | chr1.4:52483453-52483472 | MS.gene064486:CDS | 35.0% | |
| AATTTGTCAGAGCTGATTGT+TGG | + | chr1.4:52481954-52481973 | MS.gene064486:intron | 35.0% | |
| AGATTCACCAGTGAAAACTA+TGG | + | chr1.4:52485433-52485452 | MS.gene064486:CDS | 35.0% | |
| AGCATAACGAAGCAAATTCA+TGG | - | chr1.4:52484387-52484406 | None:intergenic | 35.0% | |
| AGTCATTCTCCAGAATTTAG+TGG | + | chr1.4:52483516-52483535 | MS.gene064486:CDS | 35.0% | |
| ATATACTGTTAGGTCCTTGA+TGG | + | chr1.4:52483226-52483245 | MS.gene064486:intron | 35.0% | |
| ATGCTTTAACCGATACCATA+TGG | - | chr1.4:52482343-52482362 | None:intergenic | 35.0% | |
| ATTTCATCATCTTGAAGGGA+CGG | - | chr1.4:52482423-52482442 | None:intergenic | 35.0% | |
| CAACTGAAATCCTTACTCTT+TGG | - | chr1.4:52481577-52481596 | None:intergenic | 35.0% | |
| CAGACATACTTGCTTAAATG+TGG | - | chr1.4:52481669-52481688 | None:intergenic | 35.0% | |
| CTACTGGTGTAAAACGTAAA+CGG | + | chr1.4:52483895-52483914 | MS.gene064486:CDS | 35.0% | |
| CTTCCATTTCATCATCTTGA+AGG | - | chr1.4:52482428-52482447 | None:intergenic | 35.0% | |
| GAACATTTGACACCAAAAAG+AGG | + | chr1.4:52484817-52484836 | MS.gene064486:CDS | 35.0% | |
| GAAGAAAGAATCAAAGGATG+TGG | + | chr1.4:52484854-52484873 | MS.gene064486:CDS | 35.0% | |
| GGAGATTGTTGAGATATGTA+TGG | + | chr1.4:52481992-52482011 | MS.gene064486:intron | 35.0% | |
| GGTCATTCAACTAGATTTAC+AGG | - | chr1.4:52484320-52484339 | None:intergenic | 35.0% | |
| GTCAAAATATGAAGCTTGTG+AGG | - | chr1.4:52482232-52482251 | None:intergenic | 35.0% | |
| GTGGCAAATTATGGATGAAT+GGG | - | chr1.4:52481650-52481669 | None:intergenic | 35.0% | |
| GTTGACATCAATGATCTTGA+AGG | + | chr1.4:52483277-52483296 | MS.gene064486:CDS | 35.0% | |
| TATCTCCATCAACAATACTC+AGG | - | chr1.4:52482723-52482742 | None:intergenic | 35.0% | |
| TATGATTTATGCAGGACAAG+TGG | + | chr1.4:52485058-52485077 | MS.gene064486:intron | 35.0% | |
| TCTTCAATATACCTCTGAGT+AGG | - | chr1.4:52483840-52483859 | None:intergenic | 35.0% | |
| TGACATTAGAATAGGCACAA+AGG | - | chr1.4:52483130-52483149 | None:intergenic | 35.0% | |
| TGCTTTAACCGATACCATAT+GGG | - | chr1.4:52482342-52482361 | None:intergenic | 35.0% | |
| TGTGGCAAATTATGGATGAA+TGG | - | chr1.4:52481651-52481670 | None:intergenic | 35.0% | |
| ! | CAAAGATGATTTGGAACTAG+AGG | + | chr1.4:52483000-52483019 | MS.gene064486:CDS | 35.0% |
| ! | CAGCAATTTAAACGGATTCA+AGG | - | chr1.4:52483167-52483186 | None:intergenic | 35.0% |
| ! | TATTGTTGATGGAGATAGCT+AGG | + | chr1.4:52482726-52482745 | MS.gene064486:intron | 35.0% |
| ! | TCTACATTTGATGGTTGAGT+TGG | - | chr1.4:52483666-52483685 | None:intergenic | 35.0% |
| ! | TCTTTTGATCTGCCTCTTTT+TGG | - | chr1.4:52484832-52484851 | None:intergenic | 35.0% |
| !! | TAGAGGTACTTGTCTAAACT+CGG | + | chr1.4:52483017-52483036 | MS.gene064486:intron | 35.0% |
| !! | TCTTTTTGTTTCGTCGCTTT+GGG | - | chr1.4:52485414-52485433 | None:intergenic | 35.0% |
| !!! | CGTTTTCTATGTTCTGGTTT+CGG | + | chr1.4:52484222-52484241 | MS.gene064486:intron | 35.0% |
| ACACTAAAAGGTAAGATCCG+CGG | - | chr1.4:52485352-52485371 | None:intergenic | 40.0% | |
| ACAGAAATTCAGCAAGAACG+AGG | + | chr1.4:52485107-52485126 | MS.gene064486:CDS | 40.0% | |
| ACTAGGTGGGATTGATTACA+TGG | + | chr1.4:52482149-52482168 | MS.gene064486:intron | 40.0% | |
| ACTCTCCATCTGACTACAAA+GGG | - | chr1.4:52484172-52484191 | None:intergenic | 40.0% | |
| ACTTGCGCAAATATTCTTCC+CGG | - | chr1.4:52481538-52481557 | None:intergenic | 40.0% | |
| ATAAACTGCAAGTGCCCATA+TGG | + | chr1.4:52482325-52482344 | MS.gene064486:intron | 40.0% | |
| ATATGAAGCTTGTGAGGATC+TGG | - | chr1.4:52482226-52482245 | None:intergenic | 40.0% | |
| ATGATACACATGGTGTCTTC+AGG | + | chr1.4:52483634-52483653 | MS.gene064486:CDS | 40.0% | |
| ATGTAATCAATCCCACCTAG+TGG | - | chr1.4:52482150-52482169 | None:intergenic | 40.0% | |
| CATTGATGTCAACATCATCC+AGG | - | chr1.4:52483270-52483289 | None:intergenic | 40.0% | |
| CGAATCATAGGAACTTCAGT+TGG | + | chr1.4:52485182-52485201 | MS.gene064486:intron | 40.0% | |
| GAAGACACCATGTGTATCAT+GGG | - | chr1.4:52483634-52483653 | None:intergenic | 40.0% | |
| GCAGACCAGACATGAATATT+AGG | - | chr1.4:52484699-52484718 | None:intergenic | 40.0% | |
| GCTGACGTGAAAAATGGAAA+AGG | + | chr1.4:52482682-52482701 | MS.gene064486:intron | 40.0% | |
| GGCATATCTCAATATGGAGT+TGG | + | chr1.4:52484907-52484926 | MS.gene064486:CDS | 40.0% | |
| GTCCCTTCAAGATGATGAAA+TGG | + | chr1.4:52482422-52482441 | MS.gene064486:CDS | 40.0% | |
| TACTCTCCATCTGACTACAA+AGG | - | chr1.4:52484173-52484192 | None:intergenic | 40.0% | |
| TATACCTCTGAGTAGGCTTT+CGG | - | chr1.4:52483833-52483852 | None:intergenic | 40.0% | |
| TATGGTCCATCTAGTAGTCT+TGG | + | chr1.4:52485451-52485470 | MS.gene064486:CDS | 40.0% | |
| TGAAGACACCATGTGTATCA+TGG | - | chr1.4:52483635-52483654 | None:intergenic | 40.0% | |
| TGATTCATCAAGCTGAACCT+AGG | - | chr1.4:52482394-52482413 | None:intergenic | 40.0% | |
| TGTCTAAACTCGGTTACTGT+GGG | + | chr1.4:52483027-52483046 | MS.gene064486:intron | 40.0% | |
| TTGTCTAAACTCGGTTACTG+TGG | + | chr1.4:52483026-52483045 | MS.gene064486:intron | 40.0% | |
| TTTAGTGGAAGTAGCACTGT+TGG | + | chr1.4:52483531-52483550 | MS.gene064486:CDS | 40.0% | |
| TTTCGGAATCTCTTCTCTCT+AGG | - | chr1.4:52483816-52483835 | None:intergenic | 40.0% | |
| ! | AATTGCTGTGTCCTTTTGTG+TGG | + | chr1.4:52483179-52483198 | MS.gene064486:intron | 40.0% |
| ! | AGATGGACCATAGTTTTCAC+TGG | - | chr1.4:52485443-52485462 | None:intergenic | 40.0% |
| ! | CATCTGCATGAGTTGAACAA+TGG | + | chr1.4:52483717-52483736 | MS.gene064486:CDS | 40.0% |
| ! | CTTTTGCCAAGACTACTAGA+TGG | - | chr1.4:52485460-52485479 | None:intergenic | 40.0% |
| ! | GAAGTGGCAAAGTTGATTGA+TGG | + | chr1.4:52484886-52484905 | MS.gene064486:CDS | 40.0% |
| ! | GATGTTTTCTCCAATGCATG+TGG | + | chr1.4:52483304-52483323 | MS.gene064486:CDS | 40.0% |
| ! | TGGTGTCAAATGTTCATCCT+CGG | - | chr1.4:52484812-52484831 | None:intergenic | 40.0% |
| ! | TTTTCTCCAATGCATGTGGA+GGG | + | chr1.4:52483308-52483327 | MS.gene064486:CDS | 40.0% |
| !! | CAAGAAGCATCCAAAGAAAG+AGG | + | chr1.4:52484034-52484053 | MS.gene064486:CDS | 40.0% |
| !! | CTCTTTTTGTTTCGTCGCTT+TGG | - | chr1.4:52485415-52485434 | None:intergenic | 40.0% |
| !! | GTGCTACTTCCACTAAATTC+TGG | - | chr1.4:52483528-52483547 | None:intergenic | 40.0% |
| !! | TGTGATGGATAAAGCTGTGT+TGG | + | chr1.4:52482837-52482856 | MS.gene064486:intron | 40.0% |
| !!! | GGGGGGGCTTTTTTTTTTAA+TGG | - | chr1.4:52484152-52484171 | None:intergenic | 40.0% |
| ACAGTCACCCATGATACACA+TGG | + | chr1.4:52483624-52483643 | MS.gene064486:CDS | 45.0% | |
| ACTAAAAGGTAAGATCCGCG+GGG | - | chr1.4:52485350-52485369 | None:intergenic | 45.0% | |
| CACTAAAAGGTAAGATCCGC+GGG | - | chr1.4:52485351-52485370 | None:intergenic | 45.0% | |
| CATCTCCAAGGAATCCATCA+AGG | - | chr1.4:52483243-52483262 | None:intergenic | 45.0% | |
| CTAGTGTGCTTACGTTCATC+AGG | + | chr1.4:52482947-52482966 | MS.gene064486:intron | 45.0% | |
| CTCTCCATCTGACTACAAAG+GGG | - | chr1.4:52484171-52484190 | None:intergenic | 45.0% | |
| CTGGTGTAAAACGTAAACGG+CGG | + | chr1.4:52483898-52483917 | MS.gene064486:CDS | 45.0% | |
| GAAATACCCTCCACATGCAT+TGG | - | chr1.4:52483317-52483336 | None:intergenic | 45.0% | |
| GAACAGTCATCGAAACACAG+GGG | - | chr1.4:52481823-52481842 | None:intergenic | 45.0% | |
| GCTGAATTTCTGTGCAGTAC+AGG | - | chr1.4:52485100-52485119 | None:intergenic | 45.0% | |
| GGAACAGTCATCGAAACACA+GGG | - | chr1.4:52481824-52481843 | None:intergenic | 45.0% | |
| GTCTAAACTCGGTTACTGTG+GGG | + | chr1.4:52483028-52483047 | MS.gene064486:intron | 45.0% | |
| GTGCAGTACAGGCTCTTAAA+AGG | - | chr1.4:52485089-52485108 | None:intergenic | 45.0% | |
| GTTTAGCCAATTCCAGCACT+CGG | - | chr1.4:52485381-52485400 | None:intergenic | 45.0% | |
| TACAGTACCCTGACATCTGT+GGG | - | chr1.4:52484985-52485004 | None:intergenic | 45.0% | |
| TCAATCCCACCTAGTGGAAA+AGG | - | chr1.4:52482144-52482163 | None:intergenic | 45.0% | |
| TCTAAACTCGGTTACTGTGG+GGG | + | chr1.4:52483029-52483048 | MS.gene064486:intron | 45.0% | |
| TCTCCATCTGACTACAAAGG+GGG | - | chr1.4:52484170-52484189 | None:intergenic | 45.0% | |
| TGCAAGTGCCCATATGGTAT+CGG | + | chr1.4:52482331-52482350 | MS.gene064486:intron | 45.0% | |
| TGCTTATGAAGACTCGCCTT+TGG | + | chr1.4:52483476-52483495 | MS.gene064486:CDS | 45.0% | |
| TGGAACAGTCATCGAAACAC+AGG | - | chr1.4:52481825-52481844 | None:intergenic | 45.0% | |
| ! | ACTACCAAGCCTTTTCCACT+AGG | + | chr1.4:52482132-52482151 | MS.gene064486:intron | 45.0% |
| ! | AGGCTTGGTAGTAGTTGTTG+TGG | - | chr1.4:52482124-52482143 | None:intergenic | 45.0% |
| ! | ATTCCTTGGAGATGGATTCC+TGG | + | chr1.4:52483249-52483268 | MS.gene064486:CDS | 45.0% |
| ! | CTCAATATGGAGTTGGTCGA+TGG | + | chr1.4:52484914-52484933 | MS.gene064486:CDS | 45.0% |
| ! | GAGAGCCTGAGTATTGTTGA+TGG | + | chr1.4:52482715-52482734 | MS.gene064486:intron | 45.0% |
| ! | GCGGATCTTACCTTTTAGTG+TGG | + | chr1.4:52485351-52485370 | MS.gene064486:CDS | 45.0% |
| ! | GTTTTCTCCAATGCATGTGG+AGG | + | chr1.4:52483307-52483326 | MS.gene064486:CDS | 45.0% |
| ! | TGACTACGAGCCTTTTTCCT+CGG | + | chr1.4:52484780-52484799 | MS.gene064486:CDS | 45.0% |
| ! | TGTTTCGTCGCTTTGGGTAT+GGG | - | chr1.4:52485408-52485427 | None:intergenic | 45.0% |
| ! | TTGTTTCGTCGCTTTGGGTA+TGG | - | chr1.4:52485409-52485428 | None:intergenic | 45.0% |
| !! | CTTGATGGATTCCTTGGAGA+TGG | + | chr1.4:52483241-52483260 | MS.gene064486:CDS | 45.0% |
| !! | GCATGTGGAGGGTATTTCTT+GGG | + | chr1.4:52483319-52483338 | MS.gene064486:CDS | 45.0% |
| !! | TAGGTCCTTGATGGATTCCT+TGG | + | chr1.4:52483235-52483254 | MS.gene064486:intron | 45.0% |
| !! | TGCATGTGGAGGGTATTTCT+TGG | + | chr1.4:52483318-52483337 | MS.gene064486:CDS | 45.0% |
| AAAATGATGAGACTGCCCCG+CGG | + | chr1.4:52485332-52485351 | MS.gene064486:CDS | 50.0% | |
| AGTGGAAGTAGCACTGTTGG+TGG | + | chr1.4:52483534-52483553 | MS.gene064486:CDS | 50.0% | |
| CATCCAGGAATCCATCTCCA+AGG | - | chr1.4:52483255-52483274 | None:intergenic | 50.0% | |
| CGGAATCTCTTCTCTCTAGG+TGG | - | chr1.4:52483813-52483832 | None:intergenic | 50.0% | |
| CTCCATCTGACTACAAAGGG+GGG | - | chr1.4:52484169-52484188 | None:intergenic | 50.0% | |
| CTCCTCTCTTTGCCTGAACA+GGG | + | chr1.4:52484410-52484429 | MS.gene064486:intron | 50.0% | |
| CTGTTCAGGCAAAGAGAGGA+GGG | - | chr1.4:52484411-52484430 | None:intergenic | 50.0% | |
| GATTCCGAAAGCCTACTCAG+AGG | + | chr1.4:52483826-52483845 | MS.gene064486:CDS | 50.0% | |
| GTACAGTACCCTGACATCTG+TGG | - | chr1.4:52484986-52485005 | None:intergenic | 50.0% | |
| GTGGAAGTAGCACTGTTGGT+GGG | + | chr1.4:52483535-52483554 | MS.gene064486:CDS | 50.0% | |
| TCCATCTGACTACAAAGGGG+GGG | - | chr1.4:52484168-52484187 | None:intergenic | 50.0% | |
| TCCTCTCTTTGCCTGAACAG+GGG | + | chr1.4:52484411-52484430 | MS.gene064486:intron | 50.0% | |
| TCGGACTCTTCCGAGGAAAA+AGG | - | chr1.4:52484793-52484812 | None:intergenic | 50.0% | |
| ! | ACCAAGCCTTTTCCACTAGG+TGG | + | chr1.4:52482135-52482154 | MS.gene064486:intron | 50.0% |
| ! | ACTCGGCTAGCCACACTAAA+AGG | - | chr1.4:52485364-52485383 | None:intergenic | 50.0% |
| ! | CCAAGCCTTTTCCACTAGGT+GGG | + | chr1.4:52482136-52482155 | MS.gene064486:intron | 50.0% |
| ! | GATGTGGACAGTCTCTGAAG+TGG | + | chr1.4:52484870-52484889 | MS.gene064486:CDS | 50.0% |
| ! | TTTTTCCTCGGAAGAGTCCG+AGG | + | chr1.4:52484792-52484811 | MS.gene064486:CDS | 50.0% |
| ACCGAACTCCCACAGATGTC+AGG | + | chr1.4:52484974-52484993 | MS.gene064486:CDS | 55.0% | |
| ATGAAGCCAAGCCCCTGTTC+AGG | - | chr1.4:52484425-52484444 | None:intergenic | 55.0% | |
| CCAAGCGACGAGTCTAGTAG+CGG | + | chr1.4:52483975-52483994 | MS.gene064486:CDS | 55.0% | |
| CCCACCTAGTGGAAAAGGCT+TGG | - | chr1.4:52482139-52482158 | None:intergenic | 55.0% | |
| CCCTGACATCTGTGGGAGTT+CGG | - | chr1.4:52484978-52484997 | None:intergenic | 55.0% | |
| CCGAACTCCCACAGATGTCA+GGG | + | chr1.4:52484975-52484994 | MS.gene064486:CDS | 55.0% | |
| CCTCCTCTCTTTGCCTGAAC+AGG | + | chr1.4:52484409-52484428 | MS.gene064486:intron | 55.0% | |
| CCTGTTCAGGCAAAGAGAGG+AGG | - | chr1.4:52484412-52484431 | None:intergenic | 55.0% | |
| TCTTTGCCTGAACAGGGGCT+TGG | + | chr1.4:52484416-52484435 | MS.gene064486:intron | 55.0% | |
| TTCATCCTCGGACTCTTCCG+AGG | - | chr1.4:52484800-52484819 | None:intergenic | 55.0% | |
| CCGCTACTAGACTCGTCGCT+TGG | - | chr1.4:52483978-52483997 | None:intergenic | 60.0% | |
| GCCCCCCCTTTGTAGTCAGA+TGG | + | chr1.4:52484164-52484183 | MS.gene064486:intron | 60.0% | |
| GCCCCTGTTCAGGCAAAGAG+AGG | - | chr1.4:52484415-52484434 | None:intergenic | 60.0% | |
| ! | TAGTGTGGCTAGCCGAGTGC+TGG | + | chr1.4:52485366-52485385 | MS.gene064486:CDS | 60.0% |
| !! | GGCTAGCCGAGTGCTGGAAT+TGG | + | chr1.4:52485372-52485391 | MS.gene064486:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 52481530 | 52485507 | 52481530 | ID=MS.gene064486 |
| chr1.4 | mRNA | 52481530 | 52485507 | 52481530 | ID=MS.gene064486.t1;Parent=MS.gene064486 |
| chr1.4 | exon | 52481530 | 52481580 | 52481530 | ID=MS.gene064486.t1.exon1;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52481530 | 52481580 | 52481530 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52482396 | 52482495 | 52482396 | ID=MS.gene064486.t1.exon2;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52482396 | 52482495 | 52482396 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52482969 | 52483021 | 52482969 | ID=MS.gene064486.t1.exon3;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52482969 | 52483021 | 52482969 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52483238 | 52483340 | 52483238 | ID=MS.gene064486.t1.exon4;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52483238 | 52483340 | 52483238 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52483439 | 52484055 | 52483439 | ID=MS.gene064486.t1.exon5;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52483439 | 52484055 | 52483439 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52484769 | 52484996 | 52484769 | ID=MS.gene064486.t1.exon6;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52484769 | 52484996 | 52484769 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52485072 | 52485128 | 52485072 | ID=MS.gene064486.t1.exon7;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52485072 | 52485128 | 52485072 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| chr1.4 | exon | 52485325 | 52485507 | 52485325 | ID=MS.gene064486.t1.exon8;Parent=MS.gene064486.t1 |
| chr1.4 | CDS | 52485325 | 52485507 | 52485325 | ID=cds.MS.gene064486.t1;Parent=MS.gene064486.t1 |
| Gene Sequence |
| Protein sequence |
