Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055919.t1 | XP_003624725.3 | 86.4 | 426 | 56 | 1 | 1 | 426 | 1 | 424 | 5.40E-209 | 736.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055919.t1 | Q93ZL5 | 35.6 | 340 | 167 | 10 | 84 | 406 | 117 | 421 | 4.7e-36 | 153.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055919.t1 | A0A396H9C4 | 86.4 | 426 | 56 | 1 | 1 | 426 | 1 | 424 | 3.9e-209 | 736.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene055919.t1 | TF | C2C2-Dof |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055919 | MS.gene41810 | 0.968395 | 1.29E-128 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055919.t1 | MTR_7g086780 | 96.462 | 424 | 13 | 1 | 3 | 426 | 1 | 422 | 0.0 | 846 |
MS.gene055919.t1 | MTR_6g027460 | 50.267 | 374 | 139 | 9 | 8 | 350 | 10 | 367 | 8.59e-106 | 318 |
MS.gene055919.t1 | MTR_6g027450 | 47.230 | 343 | 142 | 9 | 8 | 335 | 10 | 328 | 4.92e-93 | 283 |
MS.gene055919.t1 | MTR_6g012450 | 34.800 | 500 | 224 | 18 | 3 | 425 | 1 | 475 | 1.64e-62 | 210 |
MS.gene055919.t1 | MTR_7g010950 | 35.294 | 442 | 209 | 15 | 38 | 425 | 67 | 485 | 3.33e-53 | 185 |
MS.gene055919.t1 | MTR_8g044220 | 32.347 | 473 | 228 | 14 | 5 | 426 | 8 | 439 | 4.37e-53 | 183 |
MS.gene055919.t1 | MTR_4g082060 | 32.121 | 495 | 231 | 17 | 3 | 424 | 1 | 463 | 4.49e-53 | 184 |
MS.gene055919.t1 | MTR_3g435480 | 34.358 | 358 | 187 | 8 | 83 | 421 | 116 | 444 | 1.03e-50 | 178 |
MS.gene055919.t1 | MTR_2g016030 | 56.000 | 100 | 37 | 1 | 97 | 196 | 41 | 133 | 5.09e-32 | 119 |
MS.gene055919.t1 | MTR_5g041420 | 65.116 | 86 | 24 | 1 | 86 | 165 | 121 | 206 | 1.37e-31 | 123 |
MS.gene055919.t1 | MTR_5g041380 | 31.594 | 345 | 127 | 15 | 97 | 426 | 121 | 371 | 2.24e-31 | 123 |
MS.gene055919.t1 | MTR_5g041400 | 29.825 | 342 | 137 | 11 | 97 | 426 | 113 | 363 | 1.01e-30 | 121 |
MS.gene055919.t1 | MTR_5g041530 | 69.014 | 71 | 22 | 0 | 86 | 156 | 123 | 193 | 3.70e-28 | 114 |
MS.gene055919.t1 | MTR_8g068210 | 51.807 | 83 | 39 | 1 | 77 | 158 | 5 | 87 | 8.57e-25 | 104 |
MS.gene055919.t1 | MTR_8g027295 | 44.444 | 117 | 60 | 3 | 98 | 213 | 19 | 131 | 1.05e-24 | 102 |
MS.gene055919.t1 | MTR_3g091820 | 55.556 | 81 | 30 | 1 | 77 | 157 | 23 | 97 | 1.23e-24 | 103 |
MS.gene055919.t1 | MTR_8g479350 | 57.534 | 73 | 31 | 0 | 103 | 175 | 68 | 140 | 1.91e-24 | 103 |
MS.gene055919.t1 | MTR_4g022370 | 65.517 | 58 | 20 | 0 | 99 | 156 | 78 | 135 | 7.09e-24 | 102 |
MS.gene055919.t1 | MTR_8g079060 | 38.462 | 130 | 55 | 3 | 58 | 187 | 3 | 107 | 7.78e-24 | 99.4 |
MS.gene055919.t1 | MTR_2g059540 | 73.469 | 49 | 13 | 0 | 103 | 151 | 31 | 79 | 7.98e-24 | 99.0 |
MS.gene055919.t1 | MTR_2g093220 | 66.102 | 59 | 20 | 0 | 98 | 156 | 35 | 93 | 1.42e-23 | 100 |
MS.gene055919.t1 | MTR_2g096740 | 56.000 | 75 | 33 | 0 | 82 | 156 | 56 | 130 | 1.88e-23 | 100 |
MS.gene055919.t1 | MTR_2g096740 | 56.000 | 75 | 33 | 0 | 82 | 156 | 41 | 115 | 1.95e-23 | 99.8 |
MS.gene055919.t1 | MTR_4g063780 | 37.903 | 124 | 74 | 2 | 90 | 211 | 60 | 182 | 3.37e-23 | 100 |
MS.gene055919.t1 | MTR_4g088580 | 70.909 | 55 | 16 | 0 | 104 | 158 | 56 | 110 | 4.35e-23 | 100 |
MS.gene055919.t1 | MTR_8g015840 | 69.231 | 52 | 16 | 0 | 103 | 154 | 20 | 71 | 5.62e-23 | 96.7 |
MS.gene055919.t1 | MTR_4g109980 | 67.925 | 53 | 17 | 0 | 101 | 153 | 38 | 90 | 8.21e-23 | 98.6 |
MS.gene055919.t1 | MTR_4g461080 | 62.121 | 66 | 24 | 1 | 91 | 155 | 16 | 81 | 1.81e-22 | 96.7 |
MS.gene055919.t1 | MTR_1g077600 | 51.899 | 79 | 33 | 1 | 82 | 155 | 17 | 95 | 2.50e-22 | 96.7 |
MS.gene055919.t1 | MTR_1g077600 | 51.899 | 79 | 33 | 1 | 82 | 155 | 17 | 95 | 2.73e-22 | 96.3 |
MS.gene055919.t1 | MTR_2g014060 | 59.375 | 64 | 26 | 0 | 91 | 154 | 13 | 76 | 3.22e-22 | 97.4 |
MS.gene055919.t1 | MTR_7g059400 | 38.760 | 129 | 66 | 2 | 91 | 217 | 62 | 179 | 4.16e-22 | 97.1 |
MS.gene055919.t1 | MTR_7g024670 | 69.091 | 55 | 16 | 1 | 104 | 157 | 78 | 132 | 2.31e-21 | 95.5 |
MS.gene055919.t1 | MTR_5g031440 | 65.455 | 55 | 19 | 0 | 99 | 153 | 39 | 93 | 2.33e-21 | 94.7 |
MS.gene055919.t1 | MTR_2g013370 | 67.857 | 56 | 17 | 1 | 103 | 158 | 46 | 100 | 2.80e-21 | 93.6 |
MS.gene055919.t1 | MTR_4g089095 | 66.071 | 56 | 18 | 1 | 103 | 158 | 50 | 104 | 3.57e-21 | 93.6 |
MS.gene055919.t1 | MTR_4g089095 | 66.071 | 56 | 18 | 1 | 103 | 158 | 16 | 70 | 4.47e-21 | 92.8 |
MS.gene055919.t1 | MTR_3g090430 | 67.308 | 52 | 17 | 0 | 105 | 156 | 53 | 104 | 4.81e-21 | 94.0 |
MS.gene055919.t1 | MTR_2g014170 | 69.388 | 49 | 15 | 0 | 103 | 151 | 45 | 93 | 7.32e-21 | 92.8 |
MS.gene055919.t1 | MTR_1g056810 | 67.308 | 52 | 17 | 0 | 105 | 156 | 14 | 65 | 8.76e-21 | 92.4 |
MS.gene055919.t1 | MTR_3g077750 | 58.065 | 62 | 25 | 1 | 93 | 153 | 50 | 111 | 2.60e-20 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055919.t1 | AT5G39660 | 37.097 | 372 | 176 | 15 | 40 | 393 | 77 | 408 | 1.88e-51 | 179 |
MS.gene055919.t1 | AT5G39660 | 37.097 | 372 | 176 | 15 | 40 | 393 | 77 | 408 | 1.88e-51 | 179 |
MS.gene055919.t1 | AT5G39660 | 37.097 | 372 | 176 | 15 | 40 | 393 | 77 | 408 | 1.88e-51 | 179 |
MS.gene055919.t1 | AT3G47500 | 31.959 | 485 | 231 | 16 | 3 | 426 | 2 | 448 | 6.60e-50 | 175 |
MS.gene055919.t1 | AT5G62430 | 36.462 | 277 | 80 | 9 | 3 | 277 | 1 | 183 | 9.76e-38 | 139 |
MS.gene055919.t1 | AT1G26790 | 45.238 | 168 | 85 | 4 | 8 | 169 | 11 | 177 | 5.59e-34 | 130 |
MS.gene055919.t1 | AT1G29160 | 81.667 | 60 | 11 | 0 | 97 | 156 | 56 | 115 | 7.90e-33 | 122 |
MS.gene055919.t1 | AT2G34140 | 64.198 | 81 | 29 | 0 | 97 | 177 | 52 | 132 | 1.37e-32 | 121 |
MS.gene055919.t1 | AT1G69570 | 65.823 | 79 | 27 | 0 | 91 | 169 | 120 | 198 | 3.89e-32 | 126 |
MS.gene055919.t1 | AT3G55370 | 57.143 | 70 | 30 | 0 | 99 | 168 | 72 | 141 | 8.46e-25 | 104 |
MS.gene055919.t1 | AT3G55370 | 57.143 | 70 | 30 | 0 | 99 | 168 | 72 | 141 | 1.01e-24 | 104 |
MS.gene055919.t1 | AT3G55370 | 57.143 | 70 | 30 | 0 | 99 | 168 | 117 | 186 | 1.59e-24 | 104 |
MS.gene055919.t1 | AT5G60850 | 54.762 | 84 | 32 | 2 | 103 | 186 | 51 | 128 | 2.52e-24 | 102 |
MS.gene055919.t1 | AT5G60200 | 56.338 | 71 | 31 | 0 | 99 | 169 | 51 | 121 | 3.73e-24 | 101 |
MS.gene055919.t1 | AT1G51700 | 69.231 | 52 | 16 | 0 | 103 | 154 | 33 | 84 | 4.46e-24 | 99.4 |
MS.gene055919.t1 | AT4G24060 | 44.444 | 117 | 60 | 2 | 100 | 214 | 50 | 163 | 1.20e-23 | 101 |
MS.gene055919.t1 | AT3G61850 | 64.407 | 59 | 21 | 0 | 98 | 156 | 57 | 115 | 1.51e-23 | 100 |
MS.gene055919.t1 | AT3G61850 | 64.407 | 59 | 21 | 0 | 98 | 156 | 57 | 115 | 1.51e-23 | 100 |
MS.gene055919.t1 | AT3G61850 | 64.407 | 59 | 21 | 0 | 98 | 156 | 69 | 127 | 1.89e-23 | 100 |
MS.gene055919.t1 | AT3G61850 | 64.407 | 59 | 21 | 0 | 98 | 156 | 57 | 115 | 2.31e-23 | 100 |
MS.gene055919.t1 | AT2G28810 | 66.071 | 56 | 19 | 0 | 99 | 154 | 73 | 128 | 2.49e-23 | 100 |
MS.gene055919.t1 | AT3G61850 | 64.407 | 59 | 21 | 0 | 98 | 156 | 69 | 127 | 3.25e-23 | 100 |
MS.gene055919.t1 | AT3G21270 | 69.811 | 53 | 16 | 0 | 103 | 155 | 29 | 81 | 3.37e-23 | 97.1 |
MS.gene055919.t1 | AT2G28810 | 66.071 | 56 | 19 | 0 | 99 | 154 | 90 | 145 | 4.19e-23 | 100 |
MS.gene055919.t1 | AT2G37590 | 63.793 | 58 | 21 | 0 | 99 | 156 | 85 | 142 | 5.00e-23 | 99.8 |
MS.gene055919.t1 | AT3G45610 | 52.857 | 70 | 33 | 0 | 99 | 168 | 36 | 105 | 5.46e-23 | 97.4 |
MS.gene055919.t1 | AT1G07640 | 69.091 | 55 | 16 | 1 | 103 | 156 | 21 | 75 | 1.10e-22 | 97.4 |
MS.gene055919.t1 | AT1G07640 | 69.091 | 55 | 16 | 1 | 103 | 156 | 77 | 131 | 1.51e-22 | 98.2 |
MS.gene055919.t1 | AT1G28310 | 68.519 | 54 | 17 | 0 | 103 | 156 | 27 | 80 | 1.91e-22 | 97.4 |
MS.gene055919.t1 | AT1G07640 | 69.091 | 55 | 16 | 1 | 103 | 156 | 85 | 139 | 2.09e-22 | 97.8 |
MS.gene055919.t1 | AT4G00940 | 56.944 | 72 | 27 | 1 | 91 | 158 | 52 | 123 | 2.18e-22 | 97.1 |
MS.gene055919.t1 | AT4G00940 | 56.944 | 72 | 27 | 1 | 91 | 158 | 52 | 123 | 2.18e-22 | 97.1 |
MS.gene055919.t1 | AT4G00940 | 56.944 | 72 | 27 | 1 | 91 | 158 | 52 | 123 | 2.18e-22 | 97.1 |
MS.gene055919.t1 | AT5G65590 | 70.370 | 54 | 16 | 0 | 103 | 156 | 41 | 94 | 2.23e-22 | 97.4 |
MS.gene055919.t1 | AT1G28310 | 68.519 | 54 | 17 | 0 | 103 | 156 | 51 | 104 | 3.05e-22 | 97.4 |
MS.gene055919.t1 | AT5G02460 | 44.898 | 98 | 53 | 1 | 99 | 195 | 91 | 188 | 3.60e-22 | 98.2 |
MS.gene055919.t1 | AT3G50410 | 70.588 | 51 | 15 | 0 | 105 | 155 | 32 | 82 | 5.57e-22 | 95.1 |
MS.gene055919.t1 | AT1G64620 | 65.385 | 52 | 18 | 0 | 100 | 151 | 46 | 97 | 5.61e-22 | 97.1 |
MS.gene055919.t1 | AT5G66940 | 50.000 | 80 | 33 | 1 | 90 | 169 | 26 | 98 | 7.58e-22 | 94.0 |
MS.gene055919.t1 | AT4G38000 | 66.071 | 56 | 18 | 1 | 102 | 156 | 40 | 95 | 8.02e-22 | 94.4 |
MS.gene055919.t1 | AT2G28510 | 66.071 | 56 | 19 | 0 | 105 | 160 | 50 | 105 | 1.42e-21 | 94.7 |
MS.gene055919.t1 | AT4G21050 | 40.800 | 125 | 59 | 3 | 76 | 198 | 4 | 115 | 2.46e-21 | 92.0 |
MS.gene055919.t1 | AT3G52440 | 65.385 | 52 | 18 | 0 | 105 | 156 | 27 | 78 | 1.08e-20 | 91.3 |
MS.gene055919.t1 | AT2G46590 | 62.264 | 53 | 20 | 0 | 98 | 150 | 63 | 115 | 1.13e-20 | 93.2 |
MS.gene055919.t1 | AT2G46590 | 62.264 | 53 | 20 | 0 | 98 | 150 | 75 | 127 | 1.38e-20 | 93.2 |
MS.gene055919.t1 | AT3G52440 | 65.385 | 52 | 18 | 0 | 105 | 156 | 46 | 97 | 1.40e-20 | 91.3 |
MS.gene055919.t1 | AT1G21340 | 66.000 | 50 | 17 | 0 | 105 | 154 | 40 | 89 | 3.12e-20 | 90.1 |
MS.gene055919.t1 | AT1G47655 | 70.213 | 47 | 14 | 0 | 105 | 151 | 31 | 77 | 3.52e-20 | 89.0 |
MS.gene055919.t1 | AT5G62940 | 57.812 | 64 | 26 | 1 | 91 | 153 | 60 | 123 | 8.21e-20 | 90.9 |
MS.gene055919.t1 | AT4G21040 | 63.462 | 52 | 19 | 0 | 105 | 156 | 27 | 78 | 6.07e-18 | 83.2 |
MS.gene055919.t1 | AT4G21080 | 57.895 | 57 | 24 | 0 | 105 | 161 | 27 | 83 | 2.28e-17 | 81.6 |
MS.gene055919.t1 | AT4G21030 | 59.091 | 44 | 18 | 0 | 105 | 148 | 23 | 66 | 2.56e-11 | 63.2 |
Find 117 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTCTTCATTAGGCTTCT+TGG | 0.163517 | 7.3:+22114278 | None:intergenic |
TTTGGGTGGCTCTCAGATTT+TGG | 0.205376 | 7.3:-22114244 | MS.gene055919:CDS |
GATCATGGTATTATGCTATT+TGG | 0.221788 | 7.3:-22116467 | MS.gene055919:CDS |
AACGAGACTGTATTGAAATT+TGG | 0.235896 | 7.3:-22114876 | MS.gene055919:CDS |
TGTCCAATTCCGGCAAATTC+TGG | 0.261036 | 7.3:-22116422 | MS.gene055919:CDS |
GGTCCAGAATTTGCCGGAAT+TGG | 0.293464 | 7.3:+22116419 | None:intergenic |
TACTTCATTTCCTTGATTGC+CGG | 0.302888 | 7.3:+22114716 | None:intergenic |
AAAATTATTATATGCTTTCC+TGG | 0.315121 | 7.3:+22114184 | None:intergenic |
TATCTCTATTGTGCTTTCCT+AGG | 0.318213 | 7.3:+22114412 | None:intergenic |
GTGGGCTTGGAATTTACTAT+TGG | 0.321756 | 7.3:+22115230 | None:intergenic |
CGTGTTATCTTCGGTGGGCT+TGG | 0.325634 | 7.3:+22115217 | None:intergenic |
GCTATTTGGTTGGAAGATTC+CGG | 0.345460 | 7.3:-22116453 | MS.gene055919:CDS |
GATTCGTAAAGAGGGGTATC+AGG | 0.378052 | 7.3:+22114852 | None:intergenic |
GCAAGAACTGCCAAAGGTAT+TGG | 0.383831 | 7.3:-22115061 | MS.gene055919:CDS |
AGAAGGAAAAGACGGTGTTT+TGG | 0.384688 | 7.3:-22114262 | MS.gene055919:CDS |
ACACCTATGTTGGCAATTCC+AGG | 0.386307 | 7.3:-22114558 | MS.gene055919:CDS |
TTTGCCGGAATTGGACATTC+CGG | 0.389932 | 7.3:+22116428 | None:intergenic |
CAGAACACAATGCATCAAAT+TGG | 0.395828 | 7.3:-22114692 | MS.gene055919:CDS |
TTTATCTTGATCCGTATTAC+CGG | 0.399758 | 7.3:+22115190 | None:intergenic |
GGTAGTACCCATGGAGAAAC+AGG | 0.400241 | 7.3:+22114657 | None:intergenic |
TTGGAATAATGTTGCTTCAA+TGG | 0.402306 | 7.3:-22114622 | MS.gene055919:CDS |
TTATTCCAACCTGGATTCAT+TGG | 0.406197 | 7.3:+22114636 | None:intergenic |
AGACAATTCTTCTGATTCAA+TGG | 0.409932 | 7.3:-22115285 | MS.gene055919:CDS |
CACCAGCAGTCCAATACCTT+TGG | 0.414239 | 7.3:+22115051 | None:intergenic |
TCGTGGTTACTATAATTTGC+CGG | 0.419212 | 7.3:+22114964 | None:intergenic |
ACAAGTAACAGTTGCTGCTC+AGG | 0.422483 | 7.3:-22114450 | MS.gene055919:CDS |
ATCTCTATTGTGCTTTCCTA+GGG | 0.423915 | 7.3:+22114413 | None:intergenic |
GGACACTGAACAATCTTGTC+TGG | 0.427093 | 7.3:+22115155 | None:intergenic |
AACAGTTGCTGCTCAGGAAA+TGG | 0.428682 | 7.3:-22114444 | MS.gene055919:CDS |
CTATTGTGCTTTCCTAGGGT+TGG | 0.437965 | 7.3:+22114417 | None:intergenic |
TAAAACAGACAAGTGTGTTC+CGG | 0.446244 | 7.3:-22114370 | MS.gene055919:CDS |
CAGTCTCGAAAAGTCCTATC+CGG | 0.447133 | 7.3:-22114314 | MS.gene055919:CDS |
ACCGGTCTCCGTGTTATCTT+CGG | 0.448248 | 7.3:+22115208 | None:intergenic |
TTCCGATAGGTGCTGGGAGG+CGG | 0.451244 | 7.3:-22115013 | MS.gene055919:CDS |
ATGGTATTATGCTATTTGGT+TGG | 0.461686 | 7.3:-22116463 | MS.gene055919:CDS |
TGGTTGGAAGATTCCGGTGC+CGG | 0.462466 | 7.3:-22116447 | MS.gene055919:CDS |
ACAAGAGTCTATACCAGAAA+AGG | 0.468668 | 7.3:-22115255 | MS.gene055919:CDS |
AGAAACGTTCCGATAGGTGC+TGG | 0.471856 | 7.3:-22115020 | MS.gene055919:CDS |
ATGAGAAATGGCTCCTGAGC+TGG | 0.472426 | 7.3:+22114218 | None:intergenic |
TAACACGGAGACCGGTAATA+CGG | 0.475853 | 7.3:-22115201 | MS.gene055919:CDS |
GGTGCCGGAATGTCCAATTC+CGG | 0.478118 | 7.3:-22116432 | MS.gene055919:CDS |
GTGTTATCCTGTTTCTCCAT+GGG | 0.479488 | 7.3:-22114664 | MS.gene055919:CDS |
TACCCCTCTTTACGAATCAA+TGG | 0.484142 | 7.3:-22114847 | MS.gene055919:CDS |
AGGATACTTGCAGCAGTACA+AGG | 0.490268 | 7.3:-22115352 | MS.gene055919:CDS |
GTAACAAACACCGGCAATCA+AGG | 0.493046 | 7.3:-22114726 | MS.gene055919:CDS |
AGTGTTATCCTGTTTCTCCA+TGG | 0.495037 | 7.3:-22114665 | MS.gene055919:CDS |
TGCCAAAGGTATTGGACTGC+TGG | 0.503181 | 7.3:-22115053 | MS.gene055919:CDS |
GGAATTGGACATTCCGGCAC+CGG | 0.504425 | 7.3:+22116434 | None:intergenic |
ACCAAGAAGCCTAATGAAGA+AGG | 0.504636 | 7.3:-22114279 | MS.gene055919:CDS |
GTCTCCGTGTTATCTTCGGT+GGG | 0.507024 | 7.3:+22115212 | None:intergenic |
AGAAGAATTGTCTTGTTGCT+CGG | 0.510082 | 7.3:+22115295 | None:intergenic |
AGCACCTAGCCTCTCAATAC+CGG | 0.512664 | 7.3:-22114983 | MS.gene055919:CDS |
CGTGGTTGGAACTCCATTCG+TGG | 0.513560 | 7.3:+22114947 | None:intergenic |
GATTCCATTGATTCGTAAAG+AGG | 0.514441 | 7.3:+22114843 | None:intergenic |
CAATACAGTCTCGTTATCCA+TGG | 0.528405 | 7.3:+22114884 | None:intergenic |
TTCCGCCTCCCAGCACCTAT+CGG | 0.529039 | 7.3:+22115011 | None:intergenic |
GTAGTTTCTAGCCTCGTGGT+TGG | 0.531644 | 7.3:+22114933 | None:intergenic |
TTCTCATGCTCATACAATCC+AGG | 0.534975 | 7.3:-22114202 | MS.gene055919:CDS |
TATAATTTGCCGGTATTGAG+AGG | 0.538214 | 7.3:+22114974 | None:intergenic |
ACCGAAGATAACACGGAGAC+CGG | 0.539518 | 7.3:-22115209 | MS.gene055919:CDS |
GGAATTGCCAACATAGGTGT+TGG | 0.540068 | 7.3:+22114561 | None:intergenic |
GTGTCCGCGATGCAACAGTT+GGG | 0.540349 | 7.3:-22115138 | MS.gene055919:CDS |
GTTGTTGAAATAACAAAACT+TGG | 0.540457 | 7.3:+22115112 | None:intergenic |
ATTCCATTGATTCGTAAAGA+GGG | 0.545028 | 7.3:+22114844 | None:intergenic |
CGATCACCACCACACATCCA+TGG | 0.550071 | 7.3:-22114901 | MS.gene055919:CDS |
TCTGAGACTCAGAAGGATCA+TGG | 0.551941 | 7.3:-22116482 | MS.gene055919:CDS |
GGATTCATTGGTAGTACCCA+TGG | 0.554215 | 7.3:+22114648 | None:intergenic |
GTAGCTAATGTAGCCCGGAT+AGG | 0.554980 | 7.3:+22114300 | None:intergenic |
GGTCTCCGTGTTATCTTCGG+TGG | 0.555105 | 7.3:+22115211 | None:intergenic |
CATGGATGTGTGGTGGTGAT+CGG | 0.559985 | 7.3:+22114902 | None:intergenic |
GGAAATGGCTCACCAACCCT+AGG | 0.561749 | 7.3:-22114429 | MS.gene055919:CDS |
ACCATGGGTCCAGAATTTGC+CGG | 0.562875 | 7.3:+22116413 | None:intergenic |
CAGTTCTTGCAGAAATGTCG+AGG | 0.563164 | 7.3:+22115074 | None:intergenic |
CGACTTCGGCATCCATGCAA+TGG | 0.568776 | 7.3:-22114587 | MS.gene055919:CDS |
TCTTGGTAGCTAATGTAGCC+CGG | 0.573000 | 7.3:+22114295 | None:intergenic |
GATTGTATGAGCATGAGAAA+TGG | 0.574252 | 7.3:+22114206 | None:intergenic |
AACTTGTAGCAGCATCACAT+TGG | 0.575411 | 7.3:-22114509 | MS.gene055919:CDS |
AGTGTCCGCGATGCAACAGT+TGG | 0.576096 | 7.3:-22115139 | MS.gene055919:CDS |
GGCAGCAGTTCATCCGACTT+CGG | 0.576744 | 7.3:-22114601 | MS.gene055919:CDS |
CAAATTATAGTAACCACGAA+TGG | 0.580675 | 7.3:-22114960 | MS.gene055919:CDS |
TCCGGCAAATTCTGGACCCA+TGG | 0.581876 | 7.3:-22116414 | MS.gene055919:intron |
GCAGCAACTGTTACTTGTAG+AGG | 0.584099 | 7.3:+22114455 | None:intergenic |
TGGGTACTACCAATGAATCC+AGG | 0.586175 | 7.3:-22114645 | MS.gene055919:CDS |
CATTGCATGGATGCCGAAGT+CGG | 0.595329 | 7.3:+22114588 | None:intergenic |
AGTCTCGAAAAGTCCTATCC+GGG | 0.597281 | 7.3:-22114313 | MS.gene055919:CDS |
ATTCCTGGAATTGCCAACAT+AGG | 0.597632 | 7.3:+22114555 | None:intergenic |
AGAGAGGAACCGTCCTTGTG+TGG | 0.598119 | 7.3:-22114756 | MS.gene055919:CDS |
GAAACGTTCCGATAGGTGCT+GGG | 0.598531 | 7.3:-22115019 | MS.gene055919:CDS |
TACTACCAATGAATCCAGGT+TGG | 0.601762 | 7.3:-22114641 | MS.gene055919:CDS |
CAGTTCTGTGCAACATAGAG+AGG | 0.603480 | 7.3:-22114772 | MS.gene055919:CDS |
CCTAATGAAGAAGGAAAAGA+CGG | 0.611817 | 7.3:-22114270 | MS.gene055919:CDS |
GGCGGCGAGAGGCAAAGTGA+TGG | 0.613227 | 7.3:+22114480 | None:intergenic |
GATGCTGCTACAAGTTGTAA+AGG | 0.617256 | 7.3:+22114516 | None:intergenic |
CAGTACAAGGAAAACAGAAG+TGG | 0.617838 | 7.3:-22115339 | MS.gene055919:CDS |
TTCCATTGATTCGTAAAGAG+GGG | 0.618009 | 7.3:+22114845 | None:intergenic |
GAAGCAACATTATTCCAACC+TGG | 0.621410 | 7.3:+22114627 | None:intergenic |
CAAAGGTATTGGACTGCTGG+TGG | 0.623552 | 7.3:-22115050 | MS.gene055919:CDS |
CAAGCCCACCGAAGATAACA+CGG | 0.626181 | 7.3:-22115216 | MS.gene055919:CDS |
TTGTAGAGGAAGGCGGCGAG+AGG | 0.626239 | 7.3:+22114469 | None:intergenic |
TTTGCCGGTATTGAGAGGCT+AGG | 0.626885 | 7.3:+22114979 | None:intergenic |
GAACATGTCTGAGACTCAGA+AGG | 0.629352 | 7.3:-22116489 | MS.gene055919:CDS |
ATGGTGTCCAACACCTATGT+TGG | 0.630522 | 7.3:-22114568 | MS.gene055919:CDS |
CAACTGTTACTTGTAGAGGA+AGG | 0.635921 | 7.3:+22114459 | None:intergenic |
GTTTGTAGTTTCTAGCCTCG+TGG | 0.637790 | 7.3:+22114929 | None:intergenic |
AGGTGTTGGACACCATTGCA+TGG | 0.641634 | 7.3:+22114575 | None:intergenic |
ACGATGAGAAACGTTCCGAT+AGG | 0.645907 | 7.3:-22115026 | MS.gene055919:CDS |
GGATCTTCTGTAACAAACAC+CGG | 0.647048 | 7.3:-22114735 | MS.gene055919:CDS |
CGTTATCCATGGATGTGTGG+TGG | 0.660626 | 7.3:+22114895 | None:intergenic |
ATTTCTGCAAGAACTGCCAA+AGG | 0.665461 | 7.3:-22115067 | MS.gene055919:CDS |
ACAGAAGATCCACACAAGGA+CGG | 0.669016 | 7.3:+22114747 | None:intergenic |
GTAGCAGCATCACATTGGAG+TGG | 0.674545 | 7.3:-22114504 | MS.gene055919:CDS |
CTGTTACTTGTAGAGGAAGG+CGG | 0.676133 | 7.3:+22114462 | None:intergenic |
TCTCGTTATCCATGGATGTG+TGG | 0.680622 | 7.3:+22114892 | None:intergenic |
CGAATGGAGTTCCAACCACG+AGG | 0.695228 | 7.3:-22114944 | MS.gene055919:CDS |
GTGTCCCAACTGTTGCATCG+CGG | 0.715720 | 7.3:+22115134 | None:intergenic |
TGTTACAGAAGATCCACACA+AGG | 0.727736 | 7.3:+22114743 | None:intergenic |
ACGTTCCGATAGGTGCTGGG+AGG | 0.730741 | 7.3:-22115016 | MS.gene055919:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTGATTTTTGTAATTCT+TGG | - | chr7.3:22114864-22114883 | MS.gene055919:CDS | 15.0% |
!!! | TAATTTGTGGTTTAAATTTT+AGG | - | chr7.3:22115310-22115329 | MS.gene055919:CDS | 15.0% |
!!! | TATTTTGTTTGTTTTCTTAT+GGG | - | chr7.3:22114423-22114442 | MS.gene055919:CDS | 15.0% |
!!! | TTATTTTGTTTGTTTTCTTA+TGG | - | chr7.3:22114422-22114441 | MS.gene055919:CDS | 15.0% |
!! | TATAGTTATATATGTACCAT+GGG | + | chr7.3:22114287-22114306 | None:intergenic | 20.0% |
!! | TTATAGTTATATATGTACCA+TGG | + | chr7.3:22114288-22114307 | None:intergenic | 20.0% |
!!! | ATTTTGTTTGTTTTCTTATG+GGG | - | chr7.3:22114424-22114443 | MS.gene055919:CDS | 20.0% |
!!! | TCTTTATGTTTTAATTGTGA+TGG | - | chr7.3:22114788-22114807 | MS.gene055919:CDS | 20.0% |
!!! | TTTTTTATGATGATTTCTCT+TGG | - | chr7.3:22114965-22114984 | MS.gene055919:CDS | 20.0% |
! | ATTCATCAATCATCAATCAT+TGG | + | chr7.3:22114738-22114757 | None:intergenic | 25.0% |
! | CAATATAATGTAAACAAAGG+CGG | - | chr7.3:22114690-22114709 | MS.gene055919:CDS | 25.0% |
! | CATTTGTACACTTAATTTCT+AGG | - | chr7.3:22114938-22114957 | MS.gene055919:CDS | 25.0% |
! | CTTAGTTTATCACTAATTTG+TGG | - | chr7.3:22115297-22115316 | MS.gene055919:CDS | 25.0% |
! | GACCAATATAATGTAAACAA+AGG | - | chr7.3:22114687-22114706 | MS.gene055919:CDS | 25.0% |
! | GTTGTTGAAATAACAAAACT+TGG | + | chr7.3:22115573-22115592 | None:intergenic | 25.0% |
! | TATTATGCTTGCAAAATTTG+AGG | - | chr7.3:22115150-22115169 | MS.gene055919:CDS | 25.0% |
! | TGTATGTTGCATATGAAAAT+GGG | - | chr7.3:22114378-22114397 | MS.gene055919:CDS | 25.0% |
! | TTGTATGTTGCATATGAAAA+TGG | - | chr7.3:22114377-22114396 | MS.gene055919:CDS | 25.0% |
!!! | AGGATAATTTTGTTTCTTAG+TGG | - | chr7.3:22114510-22114529 | MS.gene055919:CDS | 25.0% |
!!! | AGTTGTAAAGGTATATTTTG+TGG | + | chr7.3:22116157-22116176 | None:intergenic | 25.0% |
!!! | ATAATTTTGTTTCTTAGTGG+AGG | - | chr7.3:22114513-22114532 | MS.gene055919:CDS | 25.0% |
AACGAGACTGTATTGAAATT+TGG | - | chr7.3:22115806-22115825 | MS.gene055919:intron | 30.0% | |
ACAACAAATTCTCACATAAC+AGG | + | chr7.3:22115198-22115217 | None:intergenic | 30.0% | |
AGACAATTCTTCTGATTCAA+TGG | - | chr7.3:22115397-22115416 | MS.gene055919:intron | 30.0% | |
CAAATTATAGTAACCACGAA+TGG | - | chr7.3:22115722-22115741 | MS.gene055919:intron | 30.0% | |
GACTAAAGATTGTTATAGTC+CGG | + | chr7.3:22114613-22114632 | None:intergenic | 30.0% | |
GATCATGGTATTATGCTATT+TGG | - | chr7.3:22114215-22114234 | MS.gene055919:CDS | 30.0% | |
TAGACAGAGAAATGAAATCA+AGG | + | chr7.3:22115246-22115265 | None:intergenic | 30.0% | |
TCATTTCTCTGTCTATTCTT+AGG | - | chr7.3:22115251-22115270 | MS.gene055919:CDS | 30.0% | |
TCCAATAGAAGTAAAAGATC+AGG | - | chr7.3:22115109-22115128 | MS.gene055919:CDS | 30.0% | |
TTTATCTTGATCCGTATTAC+CGG | + | chr7.3:22115495-22115514 | None:intergenic | 30.0% | |
! | AGGACACAAGTATAACTTTT+TGG | + | chr7.3:22115178-22115197 | None:intergenic | 30.0% |
! | ATGACTCTAAGAAAATGAAG+AGG | + | chr7.3:22114921-22114940 | None:intergenic | 30.0% |
! | ATGGTATTATGCTATTTGGT+TGG | - | chr7.3:22114219-22114238 | MS.gene055919:CDS | 30.0% |
! | CGCCTTTGTTTACATTATAT+TGG | + | chr7.3:22114692-22114711 | None:intergenic | 30.0% |
! | TCCTGATCTTTTACTTCTAT+TGG | + | chr7.3:22115113-22115132 | None:intergenic | 30.0% |
! | TTGGAATAATGTTGCTTCAA+TGG | - | chr7.3:22116060-22116079 | MS.gene055919:intron | 30.0% |
!! | ATTCCATTGATTCGTAAAGA+GGG | + | chr7.3:22115841-22115860 | None:intergenic | 30.0% |
!! | ATTTTAATGAGCTTGAGGTA+AGG | - | chr7.3:22114556-22114575 | MS.gene055919:CDS | 30.0% |
!! | CAAAATCTTCTGAAGTTTGA+AGG | - | chr7.3:22114490-22114509 | MS.gene055919:CDS | 30.0% |
!! | GATTCATTTTAATGAGCTTG+AGG | - | chr7.3:22114551-22114570 | MS.gene055919:CDS | 30.0% |
!! | GTTCTAATTGTTTTTCGAAC+CGG | + | chr7.3:22116334-22116353 | None:intergenic | 30.0% |
!!! | GTTTTAATTGTGATGGAAGA+TGG | - | chr7.3:22114795-22114814 | MS.gene055919:CDS | 30.0% |
ACAAGAGTCTATACCAGAAA+AGG | - | chr7.3:22115427-22115446 | MS.gene055919:intron | 35.0% | |
ATCTCTATTGTGCTTTCCTA+GGG | + | chr7.3:22116272-22116291 | None:intergenic | 35.0% | |
CAGAACACAATGCATCAAAT+TGG | - | chr7.3:22115990-22116009 | MS.gene055919:intron | 35.0% | |
CCTAATGAAGAAGGAAAAGA+CGG | - | chr7.3:22116412-22116431 | MS.gene055919:intron | 35.0% | |
GAAGAAAGACATAAGCTGAA+AGG | + | chr7.3:22114334-22114353 | None:intergenic | 35.0% | |
GATTGTATGAGCATGAGAAA+TGG | + | chr7.3:22116479-22116498 | None:intergenic | 35.0% | |
TAAAACAGACAAGTGTGTTC+CGG | - | chr7.3:22116312-22116331 | MS.gene055919:intron | 35.0% | |
TACTTCATTTCCTTGATTGC+CGG | + | chr7.3:22115969-22115988 | None:intergenic | 35.0% | |
TAGTAATCCAGAGTTTAGCT+GGG | + | chr7.3:22114651-22114670 | None:intergenic | 35.0% | |
TATCTCTATTGTGCTTTCCT+AGG | + | chr7.3:22116273-22116292 | None:intergenic | 35.0% | |
TGTAAACAAAGGCGGTATTT+AGG | - | chr7.3:22114698-22114717 | MS.gene055919:CDS | 35.0% | |
TGTTGCATATGAAAATGGGT+TGG | - | chr7.3:22114382-22114401 | MS.gene055919:CDS | 35.0% | |
TTATTCCAACCTGGATTCAT+TGG | + | chr7.3:22116049-22116068 | None:intergenic | 35.0% | |
TTGATGTGAACCAAAGGATT+TGG | - | chr7.3:22114888-22114907 | MS.gene055919:CDS | 35.0% | |
! | AAGATCAGGACTAGTGAAAT+AGG | - | chr7.3:22115123-22115142 | MS.gene055919:CDS | 35.0% |
! | AGAAGAATTGTCTTGTTGCT+CGG | + | chr7.3:22115390-22115409 | None:intergenic | 35.0% |
! | ATATTTTGTGGCTGAATTCC+TGG | + | chr7.3:22116145-22116164 | None:intergenic | 35.0% |
! | TATAATTTGCCGGTATTGAG+AGG | + | chr7.3:22115711-22115730 | None:intergenic | 35.0% |
! | TATGGGGTTGTTGAGATTTT+TGG | - | chr7.3:22114440-22114459 | MS.gene055919:CDS | 35.0% |
! | TCGTGGTTACTATAATTTGC+CGG | + | chr7.3:22115721-22115740 | None:intergenic | 35.0% |
!! | GATTCCATTGATTCGTAAAG+AGG | + | chr7.3:22115842-22115861 | None:intergenic | 35.0% |
!! | TTCCATTGATTCGTAAAGAG+GGG | + | chr7.3:22115840-22115859 | None:intergenic | 35.0% |
!!! | AATGGGTTGGACGTAAATTT+TGG | - | chr7.3:22114395-22114414 | MS.gene055919:CDS | 35.0% |
!!! | TTTACTATTGGCTCCTTTTC+TGG | + | chr7.3:22115443-22115462 | None:intergenic | 35.0% |
AACTTGTAGCAGCATCACAT+TGG | - | chr7.3:22116173-22116192 | MS.gene055919:intron | 40.0% | |
ACAAATTGTTCCGTAGAACC+CGG | - | chr7.3:22114579-22114598 | MS.gene055919:CDS | 40.0% | |
ACCAAGAAGCCTAATGAAGA+AGG | - | chr7.3:22116403-22116422 | MS.gene055919:intron | 40.0% | |
AGGATCAAGACCAAATCCTT+TGG | + | chr7.3:22114901-22114920 | None:intergenic | 40.0% | |
ATTCCTGGAATTGCCAACAT+AGG | + | chr7.3:22116130-22116149 | None:intergenic | 40.0% | |
ATTTCTGCAAGAACTGCCAA+AGG | - | chr7.3:22115615-22115634 | MS.gene055919:intron | 40.0% | |
CAATACAGTCTCGTTATCCA+TGG | + | chr7.3:22115801-22115820 | None:intergenic | 40.0% | |
CAGTACAAGGAAAACAGAAG+TGG | - | chr7.3:22115343-22115362 | MS.gene055919:CDS | 40.0% | |
CTAGTAATCCAGAGTTTAGC+TGG | + | chr7.3:22114652-22114671 | None:intergenic | 40.0% | |
CTGGATTACTAGAGAGTAGA+GGG | - | chr7.3:22114660-22114679 | MS.gene055919:CDS | 40.0% | |
CTTGGATTGATGTGAACCAA+AGG | - | chr7.3:22114882-22114901 | MS.gene055919:CDS | 40.0% | |
GAAGCAACATTATTCCAACC+TGG | + | chr7.3:22116058-22116077 | None:intergenic | 40.0% | |
GATGCTGCTACAAGTTGTAA+AGG | + | chr7.3:22116169-22116188 | None:intergenic | 40.0% | |
GCTATTTGGTTGGAAGATTC+CGG | - | chr7.3:22114229-22114248 | MS.gene055919:CDS | 40.0% | |
GGATCTTCTGTAACAAACAC+CGG | - | chr7.3:22115947-22115966 | MS.gene055919:intron | 40.0% | |
GTGGGCTTGGAATTTACTAT+TGG | + | chr7.3:22115455-22115474 | None:intergenic | 40.0% | |
TACCCCTCTTTACGAATCAA+TGG | - | chr7.3:22115835-22115854 | MS.gene055919:intron | 40.0% | |
TACTACCAATGAATCCAGGT+TGG | - | chr7.3:22116041-22116060 | MS.gene055919:intron | 40.0% | |
TCCTTCTTCATTAGGCTTCT+TGG | + | chr7.3:22116407-22116426 | None:intergenic | 40.0% | |
TCTGGATTACTAGAGAGTAG+AGG | - | chr7.3:22114659-22114678 | MS.gene055919:CDS | 40.0% | |
TGTTACAGAAGATCCACACA+AGG | + | chr7.3:22115942-22115961 | None:intergenic | 40.0% | |
TTATAGTCCGGATTCAAACC+CGG | + | chr7.3:22114601-22114620 | None:intergenic | 40.0% | |
TTCTCATGCTCATACAATCC+AGG | - | chr7.3:22116480-22116499 | MS.gene055919:CDS | 40.0% | |
! | AGAAGGAAAAGACGGTGTTT+TGG | - | chr7.3:22116420-22116439 | MS.gene055919:CDS | 40.0% |
! | AGTGTTATCCTGTTTCTCCA+TGG | - | chr7.3:22116017-22116036 | MS.gene055919:intron | 40.0% |
! | CAACTGTTACTTGTAGAGGA+AGG | + | chr7.3:22116226-22116245 | None:intergenic | 40.0% |
! | CCGTCTTTTCCTTCTTCATT+AGG | + | chr7.3:22116415-22116434 | None:intergenic | 40.0% |
! | GAAGGAAAAGACGGTGTTTT+GGG | - | chr7.3:22116421-22116440 | MS.gene055919:CDS | 40.0% |
! | GTGTTATCCTGTTTCTCCAT+GGG | - | chr7.3:22116018-22116037 | MS.gene055919:intron | 40.0% |
! | TCTGAGATAAGCAGAAGTTG+AGG | - | chr7.3:22115074-22115093 | MS.gene055919:CDS | 40.0% |
! | TTGCATCAGCACTTCTTTTC+TGG | + | chr7.3:22115883-22115902 | None:intergenic | 40.0% |
!!! | GGGTTGTTGAGATTTTTGGT+TGG | - | chr7.3:22114444-22114463 | MS.gene055919:CDS | 40.0% |
AACAGTTGCTGCTCAGGAAA+TGG | - | chr7.3:22116238-22116257 | MS.gene055919:intron | 45.0% | |
ACAAGTAACAGTTGCTGCTC+AGG | - | chr7.3:22116232-22116251 | MS.gene055919:intron | 45.0% | |
ACACCTATGTTGGCAATTCC+AGG | - | chr7.3:22116124-22116143 | MS.gene055919:intron | 45.0% | |
ACAGAAGATCCACACAAGGA+CGG | + | chr7.3:22115938-22115957 | None:intergenic | 45.0% | |
ACGATGAGAAACGTTCCGAT+AGG | - | chr7.3:22115656-22115675 | MS.gene055919:intron | 45.0% | |
AGGATACTTGCAGCAGTACA+AGG | - | chr7.3:22115330-22115349 | MS.gene055919:CDS | 45.0% | |
AGTCTCGAAAAGTCCTATCC+GGG | - | chr7.3:22116369-22116388 | MS.gene055919:intron | 45.0% | |
ATGGTGTCCAACACCTATGT+TGG | - | chr7.3:22116114-22116133 | MS.gene055919:intron | 45.0% | |
CAAATTGTTCCGTAGAACCC+GGG | - | chr7.3:22114580-22114599 | MS.gene055919:CDS | 45.0% | |
CAGTCTCGAAAAGTCCTATC+CGG | - | chr7.3:22116368-22116387 | MS.gene055919:intron | 45.0% | |
CAGTTCTGTGCAACATAGAG+AGG | - | chr7.3:22115910-22115929 | MS.gene055919:intron | 45.0% | |
CAGTTCTTGCAGAAATGTCG+AGG | + | chr7.3:22115611-22115630 | None:intergenic | 45.0% | |
CTATTGTGCTTTCCTAGGGT+TGG | + | chr7.3:22116268-22116287 | None:intergenic | 45.0% | |
CTTACTTCCCAGCTAAACTC+TGG | - | chr7.3:22114641-22114660 | MS.gene055919:CDS | 45.0% | |
GGAATTGCCAACATAGGTGT+TGG | + | chr7.3:22116124-22116143 | None:intergenic | 45.0% | |
GGACACTGAACAATCTTGTC+TGG | + | chr7.3:22115530-22115549 | None:intergenic | 45.0% | |
GTAACAAACACCGGCAATCA+AGG | - | chr7.3:22115956-22115975 | MS.gene055919:intron | 45.0% | |
TAACACGGAGACCGGTAATA+CGG | - | chr7.3:22115481-22115500 | MS.gene055919:intron | 45.0% | |
TATAGTCCGGATTCAAACCC+GGG | + | chr7.3:22114600-22114619 | None:intergenic | 45.0% | |
TCTCGTTATCCATGGATGTG+TGG | + | chr7.3:22115793-22115812 | None:intergenic | 45.0% | |
TGGGTACTACCAATGAATCC+AGG | - | chr7.3:22116037-22116056 | MS.gene055919:intron | 45.0% | |
TGTCCAATTCCGGCAAATTC+TGG | - | chr7.3:22114260-22114279 | MS.gene055919:CDS | 45.0% | |
TTTGCCGGAATTGGACATTC+CGG | + | chr7.3:22114257-22114276 | None:intergenic | 45.0% | |
! | CTGTTACTTGTAGAGGAAGG+CGG | + | chr7.3:22116223-22116242 | None:intergenic | 45.0% |
! | GAACATGTCTGAGACTCAGA+AGG | - | chr7.3:22114193-22114212 | MS.gene055919:CDS | 45.0% |
! | GCAAGAACTGCCAAAGGTAT+TGG | - | chr7.3:22115621-22115640 | MS.gene055919:intron | 45.0% |
! | GCAGCAACTGTTACTTGTAG+AGG | + | chr7.3:22116230-22116249 | None:intergenic | 45.0% |
! | GGATTCATTGGTAGTACCCA+TGG | + | chr7.3:22116037-22116056 | None:intergenic | 45.0% |
! | TCTGAGACTCAGAAGGATCA+TGG | - | chr7.3:22114200-22114219 | MS.gene055919:CDS | 45.0% |
! | TCTTGGTAGCTAATGTAGCC+CGG | + | chr7.3:22116390-22116409 | None:intergenic | 45.0% |
! | TTTGGGTGGCTCTCAGATTT+TGG | - | chr7.3:22116438-22116457 | MS.gene055919:CDS | 45.0% |
!! | GATTCGTAAAGAGGGGTATC+AGG | + | chr7.3:22115833-22115852 | None:intergenic | 45.0% |
!! | GTTTGTAGTTTCTAGCCTCG+TGG | + | chr7.3:22115756-22115775 | None:intergenic | 45.0% |
!!! | TGCTCGGTTTTTTCTGCACA+AGG | + | chr7.3:22115374-22115393 | None:intergenic | 45.0% |
ACCATGGGTCCAGAATTTGC+CGG | + | chr7.3:22114272-22114291 | None:intergenic | 50.0% | |
ACCGAAGATAACACGGAGAC+CGG | - | chr7.3:22115473-22115492 | MS.gene055919:intron | 50.0% | |
ACCGGTCTCCGTGTTATCTT+CGG | + | chr7.3:22115477-22115496 | None:intergenic | 50.0% | |
AGAAACGTTCCGATAGGTGC+TGG | - | chr7.3:22115662-22115681 | MS.gene055919:intron | 50.0% | |
AGCACCTAGCCTCTCAATAC+CGG | - | chr7.3:22115699-22115718 | MS.gene055919:intron | 50.0% | |
ATGAGAAATGGCTCCTGAGC+TGG | + | chr7.3:22116467-22116486 | None:intergenic | 50.0% | |
CAAGCCCACCGAAGATAACA+CGG | - | chr7.3:22115466-22115485 | MS.gene055919:intron | 50.0% | |
CACCAGCAGTCCAATACCTT+TGG | + | chr7.3:22115634-22115653 | None:intergenic | 50.0% | |
CATTGCATGGATGCCGAAGT+CGG | + | chr7.3:22116097-22116116 | None:intergenic | 50.0% | |
CGTTATCCATGGATGTGTGG+TGG | + | chr7.3:22115790-22115809 | None:intergenic | 50.0% | |
GAAACGTTCCGATAGGTGCT+GGG | - | chr7.3:22115663-22115682 | MS.gene055919:intron | 50.0% | |
GGATTCAAACCCGGGTTCTA+CGG | + | chr7.3:22114592-22114611 | None:intergenic | 50.0% | |
GGTAGTACCCATGGAGAAAC+AGG | + | chr7.3:22116028-22116047 | None:intergenic | 50.0% | |
GGTCCAGAATTTGCCGGAAT+TGG | + | chr7.3:22114266-22114285 | None:intergenic | 50.0% | |
GTAGAACCCGGGTTTGAATC+CGG | - | chr7.3:22114591-22114610 | MS.gene055919:CDS | 50.0% | |
GTAGCAGCATCACATTGGAG+TGG | - | chr7.3:22116178-22116197 | MS.gene055919:intron | 50.0% | |
GTAGCTAATGTAGCCCGGAT+AGG | + | chr7.3:22116385-22116404 | None:intergenic | 50.0% | |
GTCTCCGTGTTATCTTCGGT+GGG | + | chr7.3:22115473-22115492 | None:intergenic | 50.0% | |
! | CATGGATGTGTGGTGGTGAT+CGG | + | chr7.3:22115783-22115802 | None:intergenic | 50.0% |
! | TTTGCCGGTATTGAGAGGCT+AGG | + | chr7.3:22115706-22115725 | None:intergenic | 50.0% |
!! | AGGTGTTGGACACCATTGCA+TGG | + | chr7.3:22116110-22116129 | None:intergenic | 50.0% |
!! | CAAAGGTATTGGACTGCTGG+TGG | - | chr7.3:22115632-22115651 | MS.gene055919:intron | 50.0% |
!! | CAGATTTTGGAAGCCAGCTC+AGG | - | chr7.3:22116451-22116470 | MS.gene055919:CDS | 50.0% |
!! | GGAAAAGACGGTGTTTTGGG+TGG | - | chr7.3:22116424-22116443 | MS.gene055919:CDS | 50.0% |
!! | GTAGTTTCTAGCCTCGTGGT+TGG | + | chr7.3:22115752-22115771 | None:intergenic | 50.0% |
!! | TGCCAAAGGTATTGGACTGC+TGG | - | chr7.3:22115629-22115648 | MS.gene055919:intron | 50.0% |
AGAGAGGAACCGTCCTTGTG+TGG | - | chr7.3:22115926-22115945 | MS.gene055919:intron | 55.0% | |
AGTGTCCGCGATGCAACAGT+TGG | - | chr7.3:22115543-22115562 | MS.gene055919:intron | 55.0% | |
CGAATGGAGTTCCAACCACG+AGG | - | chr7.3:22115738-22115757 | MS.gene055919:intron | 55.0% | |
CGACTTCGGCATCCATGCAA+TGG | - | chr7.3:22116095-22116114 | MS.gene055919:intron | 55.0% | |
CGATCACCACCACACATCCA+TGG | - | chr7.3:22115781-22115800 | MS.gene055919:intron | 55.0% | |
CGTGGTTGGAACTCCATTCG+TGG | + | chr7.3:22115738-22115757 | None:intergenic | 55.0% | |
GGAAATGGCTCACCAACCCT+AGG | - | chr7.3:22116253-22116272 | MS.gene055919:intron | 55.0% | |
GGAATTGGACATTCCGGCAC+CGG | + | chr7.3:22114251-22114270 | None:intergenic | 55.0% | |
GGCAGCAGTTCATCCGACTT+CGG | - | chr7.3:22116081-22116100 | MS.gene055919:intron | 55.0% | |
GGTCTCCGTGTTATCTTCGG+TGG | + | chr7.3:22115474-22115493 | None:intergenic | 55.0% | |
GTGTCCCAACTGTTGCATCG+CGG | + | chr7.3:22115551-22115570 | None:intergenic | 55.0% | |
GTGTCCGCGATGCAACAGTT+GGG | - | chr7.3:22115544-22115563 | MS.gene055919:intron | 55.0% | |
TCCGGCAAATTCTGGACCCA+TGG | - | chr7.3:22114268-22114287 | MS.gene055919:CDS | 55.0% | |
TGGTTGGAAGATTCCGGTGC+CGG | - | chr7.3:22114235-22114254 | MS.gene055919:CDS | 55.0% | |
! | CGTGTTATCTTCGGTGGGCT+TGG | + | chr7.3:22115468-22115487 | None:intergenic | 55.0% |
! | GGTGCCGGAATGTCCAATTC+CGG | - | chr7.3:22114250-22114269 | MS.gene055919:CDS | 55.0% |
TTCCGCCTCCCAGCACCTAT+CGG | + | chr7.3:22115674-22115693 | None:intergenic | 60.0% | |
TTGTAGAGGAAGGCGGCGAG+AGG | + | chr7.3:22116216-22116235 | None:intergenic | 60.0% | |
!! | ACGTTCCGATAGGTGCTGGG+AGG | - | chr7.3:22115666-22115685 | MS.gene055919:intron | 60.0% |
!! | TTCCGATAGGTGCTGGGAGG+CGG | - | chr7.3:22115669-22115688 | MS.gene055919:intron | 60.0% |
GGCGGCGAGAGGCAAAGTGA+TGG | + | chr7.3:22116205-22116224 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 22114191 | 22116513 | 22114191 | ID=MS.gene055919 |
chr7.3 | mRNA | 22114191 | 22116513 | 22114191 | ID=MS.gene055919.t1;Parent=MS.gene055919 |
chr7.3 | exon | 22116415 | 22116513 | 22116415 | ID=MS.gene055919.t1.exon1;Parent=MS.gene055919.t1 |
chr7.3 | CDS | 22116415 | 22116513 | 22116415 | ID=cds.MS.gene055919.t1;Parent=MS.gene055919.t1 |
chr7.3 | exon | 22114191 | 22115372 | 22114191 | ID=MS.gene055919.t1.exon2;Parent=MS.gene055919.t1 |
chr7.3 | CDS | 22114191 | 22115372 | 22114191 | ID=cds.MS.gene055919.t1;Parent=MS.gene055919.t1 |
Gene Sequence |
Protein sequence |