Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056265.t1 | XP_013470364.1 | 97 | 497 | 14 | 1 | 1 | 496 | 1 | 497 | 3.30E-282 | 980.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056265.t1 | Q6NRH1 | 39.0 | 408 | 200 | 8 | 11 | 414 | 156 | 518 | 1.2e-75 | 285.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056265.t1 | A0A072VRM2 | 97.0 | 497 | 14 | 1 | 1 | 496 | 1 | 497 | 2.3e-282 | 980.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056265 | MS.gene93736 | 0.816744 | 4.72E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056265.t1 | MTR_1g113000 | 97.586 | 497 | 11 | 1 | 1 | 496 | 1 | 497 | 0.0 | 1010 |
| MS.gene056265.t1 | MTR_1g113000 | 97.857 | 420 | 9 | 0 | 1 | 420 | 1 | 420 | 0.0 | 863 |
| MS.gene056265.t1 | MTR_1g113000 | 97.857 | 420 | 9 | 0 | 1 | 420 | 1 | 420 | 0.0 | 863 |
| MS.gene056265.t1 | MTR_2g093200 | 47.672 | 451 | 209 | 5 | 16 | 461 | 14 | 442 | 2.19e-144 | 423 |
| MS.gene056265.t1 | MTR_3g100690 | 31.206 | 282 | 156 | 7 | 33 | 280 | 30 | 307 | 6.95e-33 | 133 |
| MS.gene056265.t1 | MTR_3g100690 | 51.190 | 84 | 40 | 1 | 326 | 408 | 611 | 694 | 2.63e-19 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056265.t1 | AT4G35140 | 63.692 | 493 | 167 | 5 | 7 | 496 | 13 | 496 | 0.0 | 620 |
| MS.gene056265.t1 | AT4G35140 | 65.421 | 428 | 135 | 2 | 1 | 422 | 1 | 421 | 0.0 | 575 |
| MS.gene056265.t1 | AT4G38480 | 64.179 | 402 | 117 | 2 | 19 | 420 | 21 | 395 | 0.0 | 528 |
| MS.gene056265.t1 | AT4G38480 | 63.802 | 384 | 112 | 2 | 37 | 420 | 6 | 362 | 5.73e-177 | 504 |
| MS.gene056265.t1 | AT3G45620 | 46.608 | 457 | 212 | 4 | 3 | 449 | 5 | 439 | 3.04e-141 | 415 |
| MS.gene056265.t1 | AT3G45620 | 46.563 | 451 | 202 | 5 | 28 | 461 | 57 | 485 | 8.87e-136 | 402 |
| MS.gene056265.t1 | AT5G10940 | 29.820 | 389 | 221 | 14 | 25 | 381 | 22 | 390 | 3.66e-37 | 145 |
| MS.gene056265.t1 | AT5G10940 | 47.561 | 82 | 42 | 1 | 328 | 408 | 610 | 691 | 9.78e-18 | 87.0 |
| MS.gene056265.t1 | AT5G10940 | 31.959 | 291 | 168 | 8 | 25 | 285 | 22 | 312 | 2.70e-36 | 143 |
| MS.gene056265.t1 | AT5G10940 | 47.561 | 82 | 42 | 1 | 328 | 408 | 613 | 694 | 1.02e-17 | 87.0 |
Find 133 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGTGACATTCTGCTTTC+AGG | 0.144477 | 1.3:-76818130 | MS.gene056265:CDS |
| TTGATATCCGCAAGTATAAA+TGG | 0.179923 | 1.3:-76817484 | MS.gene056265:CDS |
| GTGAAGGGTGTTAATTTCTT+TGG | 0.223337 | 1.3:-76817143 | MS.gene056265:CDS |
| TGGGATGCATCCACTGATTT+TGG | 0.240147 | 1.3:-76817464 | MS.gene056265:CDS |
| AACCCATATCTTGTGTAAAA+AGG | 0.254080 | 1.3:+76817321 | None:intergenic |
| CCAAATCTCTTTGCGGTGGC+TGG | 0.272271 | 1.3:-76817530 | MS.gene056265:CDS |
| CCAGCCACCGCAAAGAGATT+TGG | 0.295922 | 1.3:+76817530 | None:intergenic |
| TATCACTATCCACATATATA+GGG | 0.296718 | 1.3:+76817273 | None:intergenic |
| TTGGGACTGGACCCTGTTCC+CGG | 0.299447 | 1.3:-76817299 | MS.gene056265:CDS |
| ACGTGTGGAAACCAAGTTAT+TGG | 0.302451 | 1.3:-76817838 | MS.gene056265:CDS |
| GTATCACTATCCACATATAT+AGG | 0.314073 | 1.3:+76817272 | None:intergenic |
| TATATAGGGGATCCGGGAAC+AGG | 0.335222 | 1.3:+76817287 | None:intergenic |
| TCGGAGGCGGCAAGGCGGTT+AGG | 0.338921 | 1.3:+76818355 | None:intergenic |
| TGAAGGGTGTTAATTTCTTT+GGG | 0.350929 | 1.3:-76817142 | MS.gene056265:CDS |
| ACTATCCTTAAGTGGCTTGC+AGG | 0.355112 | 1.3:+76817607 | None:intergenic |
| ATTCTCTGGGATTGGGAAAC+CGG | 0.357909 | 1.3:-76818088 | MS.gene056265:CDS |
| TGCTTTCAGGTTCTGATGAT+AGG | 0.358629 | 1.3:-76818117 | MS.gene056265:CDS |
| ACATCAGCATCTGTGTTTGA+TGG | 0.359309 | 1.3:+76817212 | None:intergenic |
| CAGCCACCGCAAAGAGATTT+GGG | 0.362116 | 1.3:+76817531 | None:intergenic |
| GTAGCTTTCTCGAGGGCCTT+TGG | 0.362601 | 1.3:+76816936 | None:intergenic |
| ATTAAGCTCTCCTTCCATTC+CGG | 0.375787 | 1.3:-76818061 | MS.gene056265:CDS |
| TTACAGTTTGATCTTAGAAC+TGG | 0.379457 | 1.3:-76817650 | MS.gene056265:intron |
| TTTCACCTGCAAGCCACTTA+AGG | 0.381446 | 1.3:-76817612 | MS.gene056265:CDS |
| TTTACACAAGATATGGGTTT+GGG | 0.387005 | 1.3:-76817317 | MS.gene056265:CDS |
| GGTCTTCCTGAGAAGCTATC+TGG | 0.393087 | 1.3:+76815230 | None:intergenic |
| GGAGGATTATTCTCTGGGAT+TGG | 0.393926 | 1.3:-76818096 | MS.gene056265:CDS |
| CGGAGGCGGCAAGGCGGTTA+GGG | 0.397513 | 1.3:+76818356 | None:intergenic |
| GCAAAGAGATTTGGGTTCCT+TGG | 0.404897 | 1.3:+76817539 | None:intergenic |
| TACATCCAGCCCCTAGCCTT+GGG | 0.405589 | 1.3:+76815253 | None:intergenic |
| GATGAGAGAGTAGGAATAAC+AGG | 0.408500 | 1.3:-76817401 | MS.gene056265:CDS |
| CCACAAGTGTAAAATATATG+AGG | 0.411387 | 1.3:+76817768 | None:intergenic |
| ATGATAGGAGGATTATTCTC+TGG | 0.413210 | 1.3:-76818102 | MS.gene056265:CDS |
| CACTTGTGCTGCTGATGGCC+AGG | 0.423887 | 1.3:-76817978 | MS.gene056265:intron |
| GTACATCCAGCCCCTAGCCT+TGG | 0.432375 | 1.3:+76815252 | None:intergenic |
| TTGATGCCTGCCCAATAACT+TGG | 0.432454 | 1.3:+76817827 | None:intergenic |
| GAGGATTATTCTCTGGGATT+GGG | 0.434417 | 1.3:-76818095 | MS.gene056265:CDS |
| CTCAACTGAACAAGTCATCT+TGG | 0.441626 | 1.3:+76815047 | None:intergenic |
| CAATTGCAATTGCATTAAGA+TGG | 0.442204 | 1.3:+76817564 | None:intergenic |
| GATGTACCAGATAGCTTCTC+AGG | 0.443691 | 1.3:-76815236 | MS.gene056265:CDS |
| TAATTCCAACTATCCTTAAG+TGG | 0.445528 | 1.3:+76817599 | None:intergenic |
| CTGTGTCCTTTGAAAACTTG+AGG | 0.447470 | 1.3:+76817179 | None:intergenic |
| CGTGTGGAAACCAAGTTATT+GGG | 0.448241 | 1.3:-76817837 | MS.gene056265:CDS |
| AGAGATCGCGAAGGGGTTTG+TGG | 0.451106 | 1.3:+76818416 | None:intergenic |
| TGATATCCGCAAGTATAAAT+GGG | 0.454556 | 1.3:-76817483 | MS.gene056265:CDS |
| AAGCTCCCTTTGTTCAGAAA+AGG | 0.454590 | 1.3:+76817373 | None:intergenic |
| CCCTTTGTTCAGAAAAGGCC+AGG | 0.454950 | 1.3:+76817378 | None:intergenic |
| ACAAGATATGGGTTTGGGAC+TGG | 0.455888 | 1.3:-76817312 | MS.gene056265:CDS |
| ATCCACATATATAGGGGATC+CGG | 0.459426 | 1.3:+76817280 | None:intergenic |
| GTGAAAACAGTTGCAACATC+AGG | 0.468633 | 1.3:+76815209 | None:intergenic |
| TGTGTCCTTTGAAAACTTGA+GGG | 0.469822 | 1.3:+76817180 | None:intergenic |
| GCAAGCCACTTAAGGATAGT+TGG | 0.471845 | 1.3:-76817604 | MS.gene056265:CDS |
| CAAATCTCTTTGCGGTGGCT+GGG | 0.475125 | 1.3:-76817529 | MS.gene056265:CDS |
| AAGTGACAATGCTACGATCA+TGG | 0.475789 | 1.3:+76817996 | None:intergenic |
| CATGCTCAGCTTCTTGAAGA+TGG | 0.477635 | 1.3:-76817861 | MS.gene056265:CDS |
| CTCACCACATACTCACAATT+AGG | 0.480965 | 1.3:+76817119 | None:intergenic |
| CATAAGTTGGCTATCGAGCC+TGG | 0.488382 | 1.3:-76817795 | MS.gene056265:CDS |
| CACTTCCAAGACGGAGGGCT+AGG | 0.489594 | 1.3:-76815189 | MS.gene056265:CDS |
| TCTGTCCTAGCCCTCCGTCT+TGG | 0.497042 | 1.3:+76815184 | None:intergenic |
| TTGAGCATGACATCAAGATA+TGG | 0.498760 | 1.3:-76816962 | MS.gene056265:CDS |
| GAAAACATTGTTACTATGAC+CGG | 0.499634 | 1.3:+76818042 | None:intergenic |
| AGTGAGGCATGAACTTAGCC+TGG | 0.501626 | 1.3:+76818020 | None:intergenic |
| TGATAGGAGGATTATTCTCT+GGG | 0.505509 | 1.3:-76818101 | MS.gene056265:CDS |
| AAGTTATTGGGCAGGCATCA+AGG | 0.508381 | 1.3:-76817825 | MS.gene056265:CDS |
| TCAAGGACGGGCTCATAAGT+TGG | 0.522394 | 1.3:-76817808 | MS.gene056265:CDS |
| GATAGTGATACAAGTGAAGC+AGG | 0.522808 | 1.3:-76817260 | MS.gene056265:CDS |
| AAGGAACCCAAATCTCTTTG+CGG | 0.527523 | 1.3:-76817537 | MS.gene056265:CDS |
| AGAAACCCAAGGCTAGGGGC+TGG | 0.531714 | 1.3:-76815258 | MS.gene056265:CDS |
| TCCCGGATCCCCTATATATG+TGG | 0.532125 | 1.3:-76817282 | MS.gene056265:CDS |
| CCGACAGAAACCCAAGGCTA+GGG | 0.534772 | 1.3:-76815263 | MS.gene056265:intron |
| ATTGGGCAGGCATCAAGGAC+GGG | 0.535058 | 1.3:-76817820 | MS.gene056265:CDS |
| TAAGTGACCGAGCTCTCGAT+TGG | 0.535578 | 1.3:+76818393 | None:intergenic |
| AGTGAAGCAGGAGGCAGTCA+TGG | 0.535759 | 1.3:-76817248 | MS.gene056265:CDS |
| ACCGACGATGATGGTGATGA+TGG | 0.539335 | 1.3:-76815082 | MS.gene056265:CDS |
| GACGATTCTACCGACGATGA+TGG | 0.539752 | 1.3:-76815091 | MS.gene056265:CDS |
| GTAAACGGTGACCTCGGAGG+CGG | 0.544991 | 1.3:+76818342 | None:intergenic |
| ATTGTCACTTGTGCTGCTGA+TGG | 0.547037 | 1.3:-76817983 | MS.gene056265:CDS |
| CGGTGACCTCGGAGGCGGCA+AGG | 0.551316 | 1.3:+76818347 | None:intergenic |
| TTGGCAAAGTAGCTTTCTCG+AGG | 0.554350 | 1.3:+76816928 | None:intergenic |
| TGGGCCTAATTGTGAGTATG+TGG | 0.554431 | 1.3:-76817123 | MS.gene056265:CDS |
| TGGAAACCAAGTTATTGGGC+AGG | 0.555704 | 1.3:-76817833 | MS.gene056265:CDS |
| AGTGACAATGCTACGATCAT+GGG | 0.556241 | 1.3:+76817997 | None:intergenic |
| CGGTTAGGGAAAACTCTGGC+AGG | 0.556791 | 1.3:+76818370 | None:intergenic |
| TAAAATATATGAGGGCTACC+AGG | 0.558010 | 1.3:+76817777 | None:intergenic |
| TTTCAGGTTCTGATGATAGG+AGG | 0.559010 | 1.3:-76818114 | MS.gene056265:CDS |
| TCCACATATATAGGGGATCC+GGG | 0.559154 | 1.3:+76817281 | None:intergenic |
| ATGCAATTGCAATTGATCCA+AGG | 0.567310 | 1.3:-76817556 | MS.gene056265:CDS |
| GATCTCTCCAATCGAGAGCT+CGG | 0.567700 | 1.3:-76818400 | MS.gene056265:CDS |
| AATGGAAGGAGAGCTTAATA+CGG | 0.568872 | 1.3:+76818065 | None:intergenic |
| TCCGACAGAAACCCAAGGCT+AGG | 0.570753 | 1.3:-76815264 | MS.gene056265:intron |
| CATTGTTACTATGACCGGAA+TGG | 0.571673 | 1.3:+76818047 | None:intergenic |
| TGGTGAGCTTATTCGTGTCA+TGG | 0.573234 | 1.3:-76817054 | MS.gene056265:CDS |
| TATTGGGCAGGCATCAAGGA+CGG | 0.576805 | 1.3:-76817821 | MS.gene056265:CDS |
| ATGCATCCCATTTATACTTG+CGG | 0.576913 | 1.3:+76817477 | None:intergenic |
| GAAGGAGAGCTTAATACGGC+CGG | 0.578111 | 1.3:+76818069 | None:intergenic |
| ATATAGGGGATCCGGGAACA+GGG | 0.579427 | 1.3:+76817288 | None:intergenic |
| GAGAGTAGGAATAACAGGCC+TGG | 0.581169 | 1.3:-76817396 | MS.gene056265:CDS |
| CACAAGTGTAAAATATATGA+GGG | 0.582214 | 1.3:+76817769 | None:intergenic |
| TCAGGATGTACAAGAGAGCA+AGG | 0.586055 | 1.3:-76818447 | None:intergenic |
| CAGGAATTGCGAGACAGTGA+AGG | 0.586583 | 1.3:-76817159 | MS.gene056265:CDS |
| TACAGTTTGATCTTAGAACT+GGG | 0.587549 | 1.3:-76817649 | MS.gene056265:intron |
| AATTGTGAGTATGTGGTGAG+TGG | 0.595118 | 1.3:-76817116 | MS.gene056265:CDS |
| TAACCGCCTTGCCGCCTCCG+AGG | 0.597290 | 1.3:-76818353 | MS.gene056265:intron |
| GTTACTATGACCGGAATGGA+AGG | 0.597527 | 1.3:+76818051 | None:intergenic |
| TCGATTGGAGAGATCGCGAA+GGG | 0.603509 | 1.3:+76818408 | None:intergenic |
| CTCTCATCACCAATCAAGTG+TGG | 0.606159 | 1.3:+76817416 | None:intergenic |
| TCATCACCAATCAAGTGTGG+AGG | 0.608629 | 1.3:+76817419 | None:intergenic |
| CATCACCAATCAAGTGTGGA+GGG | 0.613329 | 1.3:+76817420 | None:intergenic |
| CTTGCAAGAACTGTTGAATG+AGG | 0.615136 | 1.3:+76816993 | None:intergenic |
| ATCACTATCCACATATATAG+GGG | 0.616277 | 1.3:+76817274 | None:intergenic |
| TCCATCATCACCATCATCGT+CGG | 0.616319 | 1.3:+76815081 | None:intergenic |
| TTGATTGGTGATGAGAGAGT+AGG | 0.616435 | 1.3:-76817410 | MS.gene056265:CDS |
| GTGTCCTTTGAAAACTTGAG+GGG | 0.617266 | 1.3:+76817181 | None:intergenic |
| ATTGCATTAAGATGGATGAC+TGG | 0.619176 | 1.3:+76817572 | None:intergenic |
| TCAACAGTTCTTGCAAGCAG+CGG | 0.629518 | 1.3:-76816987 | MS.gene056265:CDS |
| GAACCCAAATCTCTTTGCGG+TGG | 0.635615 | 1.3:-76817534 | MS.gene056265:CDS |
| AAGGCGGTTAGGGAAAACTC+TGG | 0.635631 | 1.3:+76818366 | None:intergenic |
| TGGCAAAGTAGCTTTCTCGA+GGG | 0.639432 | 1.3:+76816929 | None:intergenic |
| CGACAGAAACCCAAGGCTAG+GGG | 0.640198 | 1.3:-76815262 | MS.gene056265:intron |
| TTCACATGGAAGAAGAAAGG+TGG | 0.640293 | 1.3:-76817074 | MS.gene056265:CDS |
| CTCGATTGGAGAGATCGCGA+AGG | 0.644825 | 1.3:+76818407 | None:intergenic |
| GCTTCTTGAAGATGGACGTG+TGG | 0.646174 | 1.3:-76817853 | MS.gene056265:CDS |
| AGGAATTGCGAGACAGTGAA+GGG | 0.648153 | 1.3:-76817158 | MS.gene056265:CDS |
| ATTGTGAGTATGTGGTGAGT+GGG | 0.650208 | 1.3:-76817115 | MS.gene056265:CDS |
| AGTCGGTTGACCAAAATCAG+TGG | 0.651579 | 1.3:+76817454 | None:intergenic |
| ACTGTATGCTTCAATGCAGA+TGG | 0.652391 | 1.3:-76818148 | MS.gene056265:CDS |
| GGGGTAAACGGTGACCTCGG+AGG | 0.652927 | 1.3:+76818339 | None:intergenic |
| CATCAAGATATGGACTCCAA+AGG | 0.659996 | 1.3:-76816952 | MS.gene056265:CDS |
| ATGCTACGATCATGGGAGTG+AGG | 0.664363 | 1.3:+76818004 | None:intergenic |
| GTGTGTCCGACAGAAACCCA+AGG | 0.668621 | 1.3:-76815269 | MS.gene056265:intron |
| CGATTGGAGAGATCGCGAAG+GGG | 0.686133 | 1.3:+76818409 | None:intergenic |
| AGTGATACAAGTGAAGCAGG+AGG | 0.688788 | 1.3:-76817257 | MS.gene056265:CDS |
| GTGGTGAGTGGGTCAGACTG+TGG | 0.699088 | 1.3:-76817104 | MS.gene056265:CDS |
| TGACCTCGGAGGCGGCAAGG+CGG | 0.727818 | 1.3:+76818350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCTTCAGATTATTTATT+TGG | + | chr1.3:76816936-76816955 | None:intergenic | 15.0% |
| !! | ATTCTTATTATTATCTCATT+AGG | - | chr1.3:76815564-76815583 | MS.gene056265:intron | 15.0% |
| !! | CTATTAGAATAATTAATGAA+GGG | - | chr1.3:76817217-76817236 | MS.gene056265:CDS | 15.0% |
| !! | TAATTAATTAATCAGATTAC+AGG | + | chr1.3:76815235-76815254 | None:intergenic | 15.0% |
| !! | TATCTTCAGATTATTTATTT+GGG | + | chr1.3:76816935-76816954 | None:intergenic | 15.0% |
| !! | TCTATTAGAATAATTAATGA+AGG | - | chr1.3:76817216-76817235 | MS.gene056265:CDS | 15.0% |
| !!! | AATTATTTGATTTCGAAAAT+TGG | + | chr1.3:76815185-76815204 | None:intergenic | 15.0% |
| !!! | ATAGAAAACATTACTTTTAT+AGG | + | chr1.3:76817201-76817220 | None:intergenic | 15.0% |
| !!! | ATTTTCGAAATCAAATAATT+AGG | - | chr1.3:76815185-76815204 | MS.gene056265:CDS | 15.0% |
| !!! | TGGTTTAAAATAATCTTTTA+AGG | - | chr1.3:76817387-76817406 | MS.gene056265:CDS | 15.0% |
| !!! | TTTACATTGTTTTAGTAAAA+GGG | + | chr1.3:76815590-76815609 | None:intergenic | 15.0% |
| !!! | TTTTCGAAATCAAATAATTA+GGG | - | chr1.3:76815186-76815205 | MS.gene056265:CDS | 15.0% |
| !! | AATAAAGAACGAAAAACTAT+TGG | + | chr1.3:76815794-76815813 | None:intergenic | 20.0% |
| !! | ACCTAAATAACATAATAACA+AGG | - | chr1.3:76817538-76817557 | MS.gene056265:CDS | 20.0% |
| !! | TTATAGGTAAAAAAATGCTT+TGG | + | chr1.3:76817185-76817204 | None:intergenic | 20.0% |
| !! | TTATATATATCTCTCTAACT+GGG | - | chr1.3:76816868-76816887 | MS.gene056265:intron | 20.0% |
| !! | TTTATATATATCTCTCTAAC+TGG | - | chr1.3:76816867-76816886 | MS.gene056265:intron | 20.0% |
| !!! | ACCTTGTTATTATGTTATTT+AGG | + | chr1.3:76817542-76817561 | None:intergenic | 20.0% |
| !!! | ATGAGATAATATACGATTTT+TGG | + | chr1.3:76816649-76816668 | None:intergenic | 20.0% |
| !!! | ATTTAGAAGCATTTTAAATC+AGG | + | chr1.3:76817672-76817691 | None:intergenic | 20.0% |
| !!! | CAATGTAAACTATCAATTTT+AGG | - | chr1.3:76815601-76815620 | MS.gene056265:intron | 20.0% |
| !!! | GTTTACATTGTTTTAGTAAA+AGG | + | chr1.3:76815591-76815610 | None:intergenic | 20.0% |
| !!! | TTTAGAAGCATTTTAAATCA+GGG | + | chr1.3:76817671-76817690 | None:intergenic | 20.0% |
| ! | AAATCGTATATTATCTCATG+TGG | - | chr1.3:76816650-76816669 | MS.gene056265:intron | 25.0% |
| ! | ACATAATAACAGAAATGACT+CGG | + | chr1.3:76817272-76817291 | None:intergenic | 25.0% |
| ! | CACAAGTGTAAAATATATGA+GGG | + | chr1.3:76815724-76815743 | None:intergenic | 25.0% |
| ! | GATATTAATGAATGTGACAA+AGG | - | chr1.3:76818078-76818097 | MS.gene056265:CDS | 25.0% |
| ! | GATGATAATAATGATGACAA+TGG | - | chr1.3:76818144-76818163 | MS.gene056265:CDS | 25.0% |
| ! | GATTAGTAGTGTTTGAATAA+TGG | - | chr1.3:76817458-76817477 | MS.gene056265:CDS | 25.0% |
| ! | TACCAATGTTAAAATGATGT+TGG | + | chr1.3:76817738-76817757 | None:intergenic | 25.0% |
| ! | TATCACTATCCACATATATA+GGG | + | chr1.3:76816220-76816239 | None:intergenic | 25.0% |
| ! | TCAATATAGAAATGTTGTGT+TGG | - | chr1.3:76816729-76816748 | MS.gene056265:intron | 25.0% |
| ! | TCATATTTGATGAAATTCGT+TGG | - | chr1.3:76817872-76817891 | MS.gene056265:intron | 25.0% |
| ! | TTATTTGATTATGTAGTCCA+GGG | - | chr1.3:76817117-76817136 | MS.gene056265:CDS | 25.0% |
| ! | TTGATGTTATTACGTGATTT+AGG | - | chr1.3:76815260-76815279 | MS.gene056265:intron | 25.0% |
| !! | AAAATTTTATATCCTCGTCT+TGG | - | chr1.3:76817701-76817720 | MS.gene056265:intron | 25.0% |
| !! | AAAGATGATAATTTTTCTGG+TGG | - | chr1.3:76818168-76818187 | MS.gene056265:CDS | 25.0% |
| !! | AAGGAAAATATCTGATTTTC+TGG | - | chr1.3:76817406-76817425 | MS.gene056265:CDS | 25.0% |
| !! | GTTGAGGTTTTTAATATTTG+TGG | + | chr1.3:76817056-76817075 | None:intergenic | 25.0% |
| !! | GTTTTTAATATTTGTGGTGT+GGG | + | chr1.3:76817050-76817069 | None:intergenic | 25.0% |
| !! | TACCTTTTTACACAAGATAT+GGG | - | chr1.3:76816167-76816186 | MS.gene056265:intron | 25.0% |
| !! | TGATTATGATGATGATAATG+AGG | - | chr1.3:76818011-76818030 | MS.gene056265:CDS | 25.0% |
| !! | TGTTAAAATGATGTTGGTTA+AGG | + | chr1.3:76817732-76817751 | None:intergenic | 25.0% |
| !! | TTACCTTTTTACACAAGATA+TGG | - | chr1.3:76816166-76816185 | MS.gene056265:intron | 25.0% |
| !!! | AACCAACATCATTTTAACAT+TGG | - | chr1.3:76817733-76817752 | MS.gene056265:intron | 25.0% |
| !!! | ATATTGTCCAAAGCTTTTTT+TGG | - | chr1.3:76816952-76816971 | MS.gene056265:CDS | 25.0% |
| !!! | TTAGAAGCATTTTAAATCAG+GGG | + | chr1.3:76817670-76817689 | None:intergenic | 25.0% |
| AACCCATATCTTGTGTAAAA+AGG | + | chr1.3:76816172-76816191 | None:intergenic | 30.0% | |
| AAGATGACCAAAAAAAGCTT+TGG | + | chr1.3:76816962-76816981 | None:intergenic | 30.0% | |
| AATGAAGGGTGATTTATTGA+AGG | - | chr1.3:76817231-76817250 | MS.gene056265:CDS | 30.0% | |
| AGTTCAAGAATATACTAGTC+TGG | - | chr1.3:76817019-76817038 | MS.gene056265:CDS | 30.0% | |
| ATAATCAAATAACCACAGTC+TGG | + | chr1.3:76817109-76817128 | None:intergenic | 30.0% | |
| ATCACTATCCACATATATAG+GGG | + | chr1.3:76816219-76816238 | None:intergenic | 30.0% | |
| ATTAATGAATGTGACAAAGG+CGG | - | chr1.3:76818081-76818100 | MS.gene056265:CDS | 30.0% | |
| CAATTGCAATTGCATTAAGA+TGG | + | chr1.3:76815929-76815948 | None:intergenic | 30.0% | |
| CCACAAGTGTAAAATATATG+AGG | + | chr1.3:76815725-76815744 | None:intergenic | 30.0% | |
| GAAAACATTGTTACTATGAC+CGG | + | chr1.3:76815451-76815470 | None:intergenic | 30.0% | |
| GATCAAACTGTAAAGATAGT+TGG | + | chr1.3:76815833-76815852 | None:intergenic | 30.0% | |
| GTATCACTATCCACATATAT+AGG | + | chr1.3:76816221-76816240 | None:intergenic | 30.0% | |
| GTTATTTGATTATGTAGTCC+AGG | - | chr1.3:76817116-76817135 | MS.gene056265:CDS | 30.0% | |
| TAACTAGTTCGAAGCATAAA+AGG | + | chr1.3:76816682-76816701 | None:intergenic | 30.0% | |
| TAATTCCAACTATCCTTAAG+TGG | + | chr1.3:76815894-76815913 | None:intergenic | 30.0% | |
| TACAGTTTGATCTTAGAACT+GGG | - | chr1.3:76815841-76815860 | MS.gene056265:intron | 30.0% | |
| TAGTATGCTTGCTTATTAAC+TGG | - | chr1.3:76817148-76817167 | MS.gene056265:CDS | 30.0% | |
| TGATATCCGCAAGTATAAAT+GGG | - | chr1.3:76816007-76816026 | MS.gene056265:intron | 30.0% | |
| TGTGTTCAATACTTCATCAT+AGG | + | chr1.3:76817314-76817333 | None:intergenic | 30.0% | |
| TTACAGTTTGATCTTAGAAC+TGG | - | chr1.3:76815840-76815859 | MS.gene056265:intron | 30.0% | |
| TTGATATCCGCAAGTATAAA+TGG | - | chr1.3:76816006-76816025 | MS.gene056265:intron | 30.0% | |
| TTTACACAAGATATGGGTTT+GGG | - | chr1.3:76816173-76816192 | MS.gene056265:intron | 30.0% | |
| TTTGCCAAAAAATATTGAGC+AGG | - | chr1.3:76816577-76816596 | MS.gene056265:intron | 30.0% | |
| ! | ATTTTCACATGGAAGAAGAA+AGG | - | chr1.3:76816413-76816432 | MS.gene056265:intron | 30.0% |
| ! | CCTCATATATTTTACACTTG+TGG | - | chr1.3:76815722-76815741 | MS.gene056265:intron | 30.0% |
| ! | GGCAAAGATGATAATTTTTC+TGG | - | chr1.3:76818165-76818184 | MS.gene056265:CDS | 30.0% |
| ! | GGTTTTTAATATTTGTGGTG+TGG | + | chr1.3:76817051-76817070 | None:intergenic | 30.0% |
| ! | TCATAGTAACAATGTTTTCC+AGG | - | chr1.3:76815452-76815471 | MS.gene056265:intron | 30.0% |
| ! | TGTAATGATGATGACAACAA+TGG | - | chr1.3:76818114-76818133 | MS.gene056265:CDS | 30.0% |
| ! | TTTTACACAAGATATGGGTT+TGG | - | chr1.3:76816172-76816191 | MS.gene056265:intron | 30.0% |
| !! | CATCATTTTAACATTGGTAC+TGG | - | chr1.3:76817739-76817758 | MS.gene056265:intron | 30.0% |
| !! | TAGTGTTTGAATAATGGACT+GGG | - | chr1.3:76817464-76817483 | MS.gene056265:CDS | 30.0% |
| !! | TGAAGGGTGTTAATTTCTTT+GGG | - | chr1.3:76816348-76816367 | MS.gene056265:intron | 30.0% |
| !!! | CATACCTGCTCAATATTTTT+TGG | + | chr1.3:76816584-76816603 | None:intergenic | 30.0% |
| AATGGAAGGAGAGCTTAATA+CGG | + | chr1.3:76815428-76815447 | None:intergenic | 35.0% | |
| ACTTGCGGATATCAAAAAGT+CGG | + | chr1.3:76816001-76816020 | None:intergenic | 35.0% | |
| AGAAATGTTGTGTTGGAAAG+AGG | - | chr1.3:76816736-76816755 | MS.gene056265:intron | 35.0% | |
| ATAACAAGGTTTGAACATGC+TGG | - | chr1.3:76817552-76817571 | MS.gene056265:CDS | 35.0% | |
| ATGATAGGAGGATTATTCTC+TGG | - | chr1.3:76815388-76815407 | MS.gene056265:intron | 35.0% | |
| ATGCAATTGCAATTGATCCA+AGG | - | chr1.3:76815934-76815953 | MS.gene056265:intron | 35.0% | |
| ATGCATCCCATTTATACTTG+CGG | + | chr1.3:76816016-76816035 | None:intergenic | 35.0% | |
| ATTGCATTAAGATGGATGAC+TGG | + | chr1.3:76815921-76815940 | None:intergenic | 35.0% | |
| CCTATTTGACCATGTGAAAT+GGG | - | chr1.3:76817487-76817506 | MS.gene056265:CDS | 35.0% | |
| CTATTTGACCATGTGAAATG+GGG | - | chr1.3:76817488-76817507 | MS.gene056265:CDS | 35.0% | |
| GATTATGTGAGTGAAAGTGA+TGG | + | chr1.3:76815541-76815560 | None:intergenic | 35.0% | |
| GTGAGATCATAGTACTTATC+AGG | + | chr1.3:76817613-76817632 | None:intergenic | 35.0% | |
| TAAAATATATGAGGGCTACC+AGG | + | chr1.3:76815716-76815735 | None:intergenic | 35.0% | |
| TGATAGGAGGATTATTCTCT+GGG | - | chr1.3:76815389-76815408 | MS.gene056265:intron | 35.0% | |
| TTCGAAAATTGGTAGAGAGA+GGG | + | chr1.3:76815174-76815193 | None:intergenic | 35.0% | |
| TTGAGCATGACATCAAGATA+TGG | - | chr1.3:76816528-76816547 | MS.gene056265:intron | 35.0% | |
| TTTCGAAAATTGGTAGAGAG+AGG | + | chr1.3:76815175-76815194 | None:intergenic | 35.0% | |
| ! | AACTGTTTTCACTTCCAAGA+CGG | - | chr1.3:76818292-76818311 | MS.gene056265:intron | 35.0% |
| ! | TGATGATGATAATGAGGACA+AGG | - | chr1.3:76818017-76818036 | MS.gene056265:CDS | 35.0% |
| ! | TGTGTCCTTTGAAAACTTGA+GGG | + | chr1.3:76816313-76816332 | None:intergenic | 35.0% |
| ! | TTTTACACTTGTGGTGAAGA+TGG | - | chr1.3:76815731-76815750 | MS.gene056265:intron | 35.0% |
| !! | AAGTATTGAACACACACACA+CGG | - | chr1.3:76817320-76817339 | MS.gene056265:CDS | 35.0% |
| !! | AGCTCTAAAAACAACTGATC+TGG | + | chr1.3:76817359-76817378 | None:intergenic | 35.0% |
| !! | CTCTGCTGTTACTTTGAAAA+AGG | - | chr1.3:76817846-76817865 | MS.gene056265:CDS | 35.0% |
| !! | GCTCTAAAAACAACTGATCT+GGG | + | chr1.3:76817358-76817377 | None:intergenic | 35.0% |
| !! | GTAGTGTTTGAATAATGGAC+TGG | - | chr1.3:76817463-76817482 | MS.gene056265:CDS | 35.0% |
| !! | GTGAAGGGTGTTAATTTCTT+TGG | - | chr1.3:76816347-76816366 | MS.gene056265:intron | 35.0% |
| !!! | GTTTTTAGAGCTCACGATTT+TGG | - | chr1.3:76817367-76817386 | MS.gene056265:CDS | 35.0% |
| AAAAAGCTCGATAAGCACAG+AGG | - | chr1.3:76815309-76815328 | MS.gene056265:intron | 40.0% | |
| AAATAACCACAGTCTGGTCA+AGG | + | chr1.3:76817103-76817122 | None:intergenic | 40.0% | |
| AAGCTCCCTTTGTTCAGAAA+AGG | + | chr1.3:76816120-76816139 | None:intergenic | 40.0% | |
| AAGGAACCCAAATCTCTTTG+CGG | - | chr1.3:76815953-76815972 | MS.gene056265:intron | 40.0% | |
| AAGTGACAATGCTACGATCA+TGG | + | chr1.3:76815497-76815516 | None:intergenic | 40.0% | |
| AATAACCACAGTCTGGTCAA+GGG | + | chr1.3:76817102-76817121 | None:intergenic | 40.0% | |
| AATTGTGAGTATGTGGTGAG+TGG | - | chr1.3:76816374-76816393 | MS.gene056265:intron | 40.0% | |
| ACATCAGCATCTGTGTTTGA+TGG | + | chr1.3:76816281-76816300 | None:intergenic | 40.0% | |
| ACGTGTGGAAACCAAGTTAT+TGG | - | chr1.3:76815652-76815671 | MS.gene056265:intron | 40.0% | |
| ACTGTATGCTTCAATGCAGA+TGG | - | chr1.3:76815342-76815361 | MS.gene056265:intron | 40.0% | |
| AGTGAACTATTAAGCAGCAG+AGG | - | chr1.3:76817814-76817833 | MS.gene056265:CDS | 40.0% | |
| AGTGACAATGCTACGATCAT+GGG | + | chr1.3:76815496-76815515 | None:intergenic | 40.0% | |
| ATCCACATATATAGGGGATC+CGG | + | chr1.3:76816213-76816232 | None:intergenic | 40.0% | |
| ATTAAGCTCTCCTTCCATTC+CGG | - | chr1.3:76815429-76815448 | MS.gene056265:intron | 40.0% | |
| ATTGTGAGTATGTGGTGAGT+GGG | - | chr1.3:76816375-76816394 | MS.gene056265:intron | 40.0% | |
| CATCAAGATATGGACTCCAA+AGG | - | chr1.3:76816538-76816557 | MS.gene056265:intron | 40.0% | |
| CATTGTTACTATGACCGGAA+TGG | + | chr1.3:76815446-76815465 | None:intergenic | 40.0% | |
| CCCATTTCACATGGTCAAAT+AGG | + | chr1.3:76817490-76817509 | None:intergenic | 40.0% | |
| CGTGTGGAAACCAAGTTATT+GGG | - | chr1.3:76815653-76815672 | MS.gene056265:intron | 40.0% | |
| CTCACCACATACTCACAATT+AGG | + | chr1.3:76816374-76816393 | None:intergenic | 40.0% | |
| CTTGCAAGAACTGTTGAATG+AGG | + | chr1.3:76816500-76816519 | None:intergenic | 40.0% | |
| CTTGCGGATATCAAAAAGTC+GGG | + | chr1.3:76816000-76816019 | None:intergenic | 40.0% | |
| GATAGTGATACAAGTGAAGC+AGG | - | chr1.3:76816230-76816249 | MS.gene056265:intron | 40.0% | |
| GATGAGAGAGTAGGAATAAC+AGG | - | chr1.3:76816089-76816108 | MS.gene056265:intron | 40.0% | |
| GATGATGACAACAATGGTGT+TGG | - | chr1.3:76818120-76818139 | MS.gene056265:CDS | 40.0% | |
| GCCTATTTGACCATGTGAAA+TGG | - | chr1.3:76817486-76817505 | MS.gene056265:CDS | 40.0% | |
| GTGAAAACAGTTGCAACATC+AGG | + | chr1.3:76818284-76818303 | None:intergenic | 40.0% | |
| GTTGTAGAGGATAAGAGTTG+AGG | + | chr1.3:76817072-76817091 | None:intergenic | 40.0% | |
| TCGAAAATTGGTAGAGAGAG+GGG | + | chr1.3:76815173-76815192 | None:intergenic | 40.0% | |
| TGCACTTACAGCACAAGTTA+AGG | - | chr1.3:76816703-76816722 | MS.gene056265:intron | 40.0% | |
| TTCACATGGAAGAAGAAAGG+TGG | - | chr1.3:76816416-76816435 | MS.gene056265:intron | 40.0% | |
| TTGAGATTGAATGTCAGCCA+GGG | + | chr1.3:76816997-76817016 | None:intergenic | 40.0% | |
| ! | ACTGTGGTCGTATTTTCACA+TGG | - | chr1.3:76816402-76816421 | MS.gene056265:intron | 40.0% |
| ! | AGTATTGAACACACACACAC+GGG | - | chr1.3:76817321-76817340 | MS.gene056265:CDS | 40.0% |
| ! | ATTGCCCCTCAAGTTTTCAA+AGG | - | chr1.3:76816305-76816324 | MS.gene056265:intron | 40.0% |
| ! | CTCAAGTTTTCAAAGGACAC+AGG | - | chr1.3:76816312-76816331 | MS.gene056265:intron | 40.0% |
| ! | CTGTGTCCTTTGAAAACTTG+AGG | + | chr1.3:76816314-76816333 | None:intergenic | 40.0% |
| ! | GTGTCCTTTGAAAACTTGAG+GGG | + | chr1.3:76816312-76816331 | None:intergenic | 40.0% |
| ! | GTTTGAGAGTGATGATGATG+AGG | - | chr1.3:76817894-76817913 | MS.gene056265:intron | 40.0% |
| !! | CAAGGGAAGATTTGTTGTAG+AGG | + | chr1.3:76817085-76817104 | None:intergenic | 40.0% |
| !! | GAGGATTATTCTCTGGGATT+GGG | - | chr1.3:76815395-76815414 | MS.gene056265:intron | 40.0% |
| !! | GTAAAGATAGTTGGTGAGAG+AGG | + | chr1.3:76815824-76815843 | None:intergenic | 40.0% |
| !! | TGCTTTCAGGTTCTGATGAT+AGG | - | chr1.3:76815373-76815392 | MS.gene056265:intron | 40.0% |
| !! | TTGATTGGTGATGAGAGAGT+AGG | - | chr1.3:76816080-76816099 | MS.gene056265:intron | 40.0% |
| !! | TTTCAGGTTCTGATGATAGG+AGG | - | chr1.3:76815376-76815395 | MS.gene056265:intron | 40.0% |
| AAGTTATTGGGCAGGCATCA+AGG | - | chr1.3:76815665-76815684 | MS.gene056265:intron | 45.0% | |
| AGCATACTACAACTTTGCCC+TGG | + | chr1.3:76817137-76817156 | None:intergenic | 45.0% | |
| AGGAATTGCGAGACAGTGAA+GGG | - | chr1.3:76816332-76816351 | MS.gene056265:intron | 45.0% | |
| AGTCGGTTGACCAAAATCAG+TGG | + | chr1.3:76816039-76816058 | None:intergenic | 45.0% | |
| AGTGATACAAGTGAAGCAGG+AGG | - | chr1.3:76816233-76816252 | MS.gene056265:intron | 45.0% | |
| ATCTTTCCTCTAACTACCCC+TGG | - | chr1.3:76816977-76816996 | MS.gene056265:CDS | 45.0% | |
| CATCACCAATCAAGTGTGGA+GGG | + | chr1.3:76816073-76816092 | None:intergenic | 45.0% | |
| CATGCTCAGCTTCTTGAAGA+TGG | - | chr1.3:76815629-76815648 | MS.gene056265:intron | 45.0% | |
| CTCTCATCACCAATCAAGTG+TGG | + | chr1.3:76816077-76816096 | None:intergenic | 45.0% | |
| GATGGTGACATTCTGCTTTC+AGG | - | chr1.3:76815360-76815379 | MS.gene056265:intron | 45.0% | |
| GATGTACCAGATAGCTTCTC+AGG | - | chr1.3:76818254-76818273 | MS.gene056265:intron | 45.0% | |
| GCAAGCCACTTAAGGATAGT+TGG | - | chr1.3:76815886-76815905 | MS.gene056265:intron | 45.0% | |
| GGAGGGCAAAAATAGTCAGT+CGG | + | chr1.3:76816056-76816075 | None:intergenic | 45.0% | |
| GTTAAGGACTTTCCAAGACG+AGG | + | chr1.3:76817716-76817735 | None:intergenic | 45.0% | |
| GTTACTATGACCGGAATGGA+AGG | + | chr1.3:76815442-76815461 | None:intergenic | 45.0% | |
| GTTGAGATTGAATGTCAGCC+AGG | + | chr1.3:76816998-76817017 | None:intergenic | 45.0% | |
| TCAACAGTTCTTGCAAGCAG+CGG | - | chr1.3:76816503-76816522 | MS.gene056265:intron | 45.0% | |
| TCATCACCAATCAAGTGTGG+AGG | + | chr1.3:76816074-76816093 | None:intergenic | 45.0% | |
| TCATGCTAACATGTGCCCTA+CGG | + | chr1.3:76816836-76816855 | None:intergenic | 45.0% | |
| TCCACATATATAGGGGATCC+GGG | + | chr1.3:76816212-76816231 | None:intergenic | 45.0% | |
| TCCATCATCACCATCATCGT+CGG | + | chr1.3:76818412-76818431 | None:intergenic | 45.0% | |
| TCTGGCCACAACAGTTCATA+CGG | - | chr1.3:76817424-76817443 | MS.gene056265:CDS | 45.0% | |
| TGAGATTGAATGTCAGCCAG+GGG | + | chr1.3:76816996-76817015 | None:intergenic | 45.0% | |
| TGGAAACCAAGTTATTGGGC+AGG | - | chr1.3:76815657-76815676 | MS.gene056265:intron | 45.0% | |
| TGGCAAAGTAGCTTTCTCGA+GGG | + | chr1.3:76816564-76816583 | None:intergenic | 45.0% | |
| TGGGCCTAATTGTGAGTATG+TGG | - | chr1.3:76816367-76816386 | MS.gene056265:intron | 45.0% | |
| TGGTGAGCTTATTCGTGTCA+TGG | - | chr1.3:76816436-76816455 | MS.gene056265:intron | 45.0% | |
| TTCCTTAACAAGTGCCCGTA+GGG | - | chr1.3:76816818-76816837 | MS.gene056265:intron | 45.0% | |
| TTGATGCCTGCCCAATAACT+TGG | + | chr1.3:76815666-76815685 | None:intergenic | 45.0% | |
| TTGGCAAAGTAGCTTTCTCG+AGG | + | chr1.3:76816565-76816584 | None:intergenic | 45.0% | |
| TTGGTAGAGAGAGGGGTAAA+CGG | + | chr1.3:76815166-76815185 | None:intergenic | 45.0% | |
| TTTCACCTGCAAGCCACTTA+AGG | - | chr1.3:76815878-76815897 | MS.gene056265:intron | 45.0% | |
| TTTCCTTAACAAGTGCCCGT+AGG | - | chr1.3:76816817-76816836 | MS.gene056265:intron | 45.0% | |
| ! | ACAAGATATGGGTTTGGGAC+TGG | - | chr1.3:76816178-76816197 | MS.gene056265:intron | 45.0% |
| ! | ACTATCCTTAAGTGGCTTGC+AGG | + | chr1.3:76815886-76815905 | None:intergenic | 45.0% |
| ! | ATTGTCACTTGTGCTGCTGA+TGG | - | chr1.3:76815507-76815526 | MS.gene056265:intron | 45.0% |
| ! | GCAAAGAGATTTGGGTTCCT+TGG | + | chr1.3:76815954-76815973 | None:intergenic | 45.0% |
| ! | GTTTTCACTTCCAAGACGGA+GGG | - | chr1.3:76818296-76818315 | MS.gene056265:intron | 45.0% |
| ! | TGTTTTCACTTCCAAGACGG+AGG | - | chr1.3:76818295-76818314 | MS.gene056265:intron | 45.0% |
| ! | TTTTGCCCTCCACACTTGAT+TGG | - | chr1.3:76816065-76816084 | MS.gene056265:intron | 45.0% |
| !! | ATTCTCTGGGATTGGGAAAC+CGG | - | chr1.3:76815402-76815421 | MS.gene056265:intron | 45.0% |
| !! | CCTGGCCTTTTCTGAACAAA+GGG | - | chr1.3:76816112-76816131 | MS.gene056265:intron | 45.0% |
| !! | GAGTGAAAGTGATGGATACC+TGG | + | chr1.3:76815533-76815552 | None:intergenic | 45.0% |
| !! | GGAGGATTATTCTCTGGGAT+TGG | - | chr1.3:76815394-76815413 | MS.gene056265:intron | 45.0% |
| !! | GGATTAGTCCCCATTTCACA+TGG | + | chr1.3:76817499-76817518 | None:intergenic | 45.0% |
| !!! | TGGGATGCATCCACTGATTT+TGG | - | chr1.3:76816026-76816045 | MS.gene056265:intron | 45.0% |
| AACCCCCGTATGAACTGTTG+TGG | + | chr1.3:76817432-76817451 | None:intergenic | 50.0% | |
| AAGGCGGTTAGGGAAAACTC+TGG | + | chr1.3:76815127-76815146 | None:intergenic | 50.0% | |
| AGGTTTGAACATGCTGGCCA+TGG | - | chr1.3:76817558-76817577 | MS.gene056265:CDS | 50.0% | |
| AGTGAGGCATGAACTTAGCC+TGG | + | chr1.3:76815473-76815492 | None:intergenic | 50.0% | |
| ATATAGGGGATCCGGGAACA+GGG | + | chr1.3:76816205-76816224 | None:intergenic | 50.0% | |
| ATCTTCCCTTGACCAGACTG+TGG | - | chr1.3:76817094-76817113 | MS.gene056265:CDS | 50.0% | |
| ATGCTACGATCATGGGAGTG+AGG | + | chr1.3:76815489-76815508 | None:intergenic | 50.0% | |
| CAAATCTCTTTGCGGTGGCT+GGG | - | chr1.3:76815961-76815980 | MS.gene056265:intron | 50.0% | |
| CAGCCACCGCAAAGAGATTT+GGG | + | chr1.3:76815962-76815981 | None:intergenic | 50.0% | |
| CAGGAATTGCGAGACAGTGA+AGG | - | chr1.3:76816331-76816350 | MS.gene056265:intron | 50.0% | |
| CATGCTAACATGTGCCCTAC+GGG | + | chr1.3:76816835-76816854 | None:intergenic | 50.0% | |
| CCCTTTGTTCAGAAAAGGCC+AGG | + | chr1.3:76816115-76816134 | None:intergenic | 50.0% | |
| CTGGCCACAACAGTTCATAC+GGG | - | chr1.3:76817425-76817444 | MS.gene056265:CDS | 50.0% | |
| GAACCCAAATCTCTTTGCGG+TGG | - | chr1.3:76815956-76815975 | MS.gene056265:intron | 50.0% | |
| GAAGGAGAGCTTAATACGGC+CGG | + | chr1.3:76815424-76815443 | None:intergenic | 50.0% | |
| GACGATTCTACCGACGATGA+TGG | - | chr1.3:76818399-76818418 | MS.gene056265:CDS | 50.0% | |
| GACTAATCCAGACAGCAGCA+CGG | - | chr1.3:76817510-76817529 | MS.gene056265:CDS | 50.0% | |
| GAGAGTAGGAATAACAGGCC+TGG | - | chr1.3:76816094-76816113 | MS.gene056265:intron | 50.0% | |
| GAGGACAAGGATGACGATGA+AGG | - | chr1.3:76818030-76818049 | MS.gene056265:CDS | 50.0% | |
| GATCTCTCCAATCGAGAGCT+CGG | - | chr1.3:76815090-76815109 | MS.gene056265:CDS | 50.0% | |
| GCTTCTTGAAGATGGACGTG+TGG | - | chr1.3:76815637-76815656 | MS.gene056265:intron | 50.0% | |
| GGTCTTCCTGAGAAGCTATC+TGG | + | chr1.3:76818263-76818282 | None:intergenic | 50.0% | |
| GGTTTGAACATGCTGGCCAT+GGG | - | chr1.3:76817559-76817578 | MS.gene056265:CDS | 50.0% | |
| GTTTGAACATGCTGGCCATG+GGG | - | chr1.3:76817560-76817579 | MS.gene056265:CDS | 50.0% | |
| TAAGTGACCGAGCTCTCGAT+TGG | + | chr1.3:76815100-76815119 | None:intergenic | 50.0% | |
| TATATAGGGGATCCGGGAAC+AGG | + | chr1.3:76816206-76816225 | None:intergenic | 50.0% | |
| TATTGGGCAGGCATCAAGGA+CGG | - | chr1.3:76815669-76815688 | MS.gene056265:intron | 50.0% | |
| TCCCGGATCCCCTATATATG+TGG | - | chr1.3:76816208-76816227 | MS.gene056265:intron | 50.0% | |
| TCGATTGGAGAGATCGCGAA+GGG | + | chr1.3:76815085-76815104 | None:intergenic | 50.0% | |
| TGGCCACAACAGTTCATACG+GGG | - | chr1.3:76817426-76817445 | MS.gene056265:CDS | 50.0% | |
| ! | ACCGACGATGATGGTGATGA+TGG | - | chr1.3:76818408-76818427 | MS.gene056265:CDS | 50.0% |
| ! | CATAAGTTGGCTATCGAGCC+TGG | - | chr1.3:76815695-76815714 | MS.gene056265:intron | 50.0% |
| ! | TCAAGGACGGGCTCATAAGT+TGG | - | chr1.3:76815682-76815701 | MS.gene056265:intron | 50.0% |
| !! | GCCTGGCCTTTTCTGAACAA+AGG | - | chr1.3:76816111-76816130 | MS.gene056265:intron | 50.0% |
| AGAGATCGCGAAGGGGTTTG+TGG | + | chr1.3:76815077-76815096 | None:intergenic | 55.0% | |
| AGAGGGGTAAACGGTGACCT+CGG | + | chr1.3:76815157-76815176 | None:intergenic | 55.0% | |
| AGTGAAGCAGGAGGCAGTCA+TGG | - | chr1.3:76816242-76816261 | MS.gene056265:intron | 55.0% | |
| ATTGGGCAGGCATCAAGGAC+GGG | - | chr1.3:76815670-76815689 | MS.gene056265:intron | 55.0% | |
| CCAAATCTCTTTGCGGTGGC+TGG | - | chr1.3:76815960-76815979 | MS.gene056265:intron | 55.0% | |
| CCAGCCACCGCAAAGAGATT+TGG | + | chr1.3:76815963-76815982 | None:intergenic | 55.0% | |
| CCGACAGAAACCCAAGGCTA+GGG | - | chr1.3:76818227-76818246 | MS.gene056265:intron | 55.0% | |
| CGACAGAAACCCAAGGCTAG+GGG | - | chr1.3:76818228-76818247 | MS.gene056265:intron | 55.0% | |
| CGATTGGAGAGATCGCGAAG+GGG | + | chr1.3:76815084-76815103 | None:intergenic | 55.0% | |
| CGGTTAGGGAAAACTCTGGC+AGG | + | chr1.3:76815123-76815142 | None:intergenic | 55.0% | |
| CTCGATTGGAGAGATCGCGA+AGG | + | chr1.3:76815086-76815105 | None:intergenic | 55.0% | |
| GGCCACAACAGTTCATACGG+GGG | - | chr1.3:76817427-76817446 | MS.gene056265:CDS | 55.0% | |
| GTAGCTTTCTCGAGGGCCTT+TGG | + | chr1.3:76816557-76816576 | None:intergenic | 55.0% | |
| GTGTGTCCGACAGAAACCCA+AGG | - | chr1.3:76818221-76818240 | MS.gene056265:intron | 55.0% | |
| TCCGACAGAAACCCAAGGCT+AGG | - | chr1.3:76818226-76818245 | MS.gene056265:intron | 55.0% | |
| TGTCAGCCAGGGGTAGTTAG+AGG | + | chr1.3:76816986-76817005 | None:intergenic | 55.0% | |
| ! | GTCTTAACCGTGCTGCTGTC+TGG | + | chr1.3:76817520-76817539 | None:intergenic | 55.0% |
| ! | TACATCCAGCCCCTAGCCTT+GGG | + | chr1.3:76818240-76818259 | None:intergenic | 55.0% |
| ! | TGCCCTACGGGCACTTGTTA+AGG | + | chr1.3:76816823-76816842 | None:intergenic | 55.0% |
| !! | CCCTAGCCTTGGGTTTCTGT+CGG | + | chr1.3:76818230-76818249 | None:intergenic | 55.0% |
| AACACCCACCCAACTCCCCA+TGG | + | chr1.3:76817578-76817597 | None:intergenic | 60.0% | |
| ACATGCTGGCCATGGGGAGT+TGG | - | chr1.3:76817566-76817585 | MS.gene056265:CDS | 60.0% | |
| AGAAACCCAAGGCTAGGGGC+TGG | - | chr1.3:76818232-76818251 | MS.gene056265:intron | 60.0% | |
| CACTTCCAAGACGGAGGGCT+AGG | - | chr1.3:76818301-76818320 | MS.gene056265:intron | 60.0% | |
| CATGCTGGCCATGGGGAGTT+GGG | - | chr1.3:76817567-76817586 | MS.gene056265:CDS | 60.0% | |
| GTAAACGGTGACCTCGGAGG+CGG | + | chr1.3:76815151-76815170 | None:intergenic | 60.0% | |
| GTACATCCAGCCCCTAGCCT+TGG | + | chr1.3:76818241-76818260 | None:intergenic | 60.0% | |
| GTGGTGAGTGGGTCAGACTG+TGG | - | chr1.3:76816386-76816405 | MS.gene056265:intron | 60.0% | |
| TCTGTCCTAGCCCTCCGTCT+TGG | + | chr1.3:76818309-76818328 | None:intergenic | 60.0% | |
| TTGGGACTGGACCCTGTTCC+CGG | - | chr1.3:76816191-76816210 | MS.gene056265:intron | 60.0% | |
| ! | CACTTGTGCTGCTGATGGCC+AGG | - | chr1.3:76815512-76815531 | MS.gene056265:intron | 60.0% |
| CTGGCCATGGGGAGTTGGGT+GGG | - | chr1.3:76817571-76817590 | MS.gene056265:CDS | 65.0% | |
| GGGGTAAACGGTGACCTCGG+AGG | + | chr1.3:76815154-76815173 | None:intergenic | 65.0% | |
| CGGAGGCGGCAAGGCGGTTA+GGG | + | chr1.3:76815137-76815156 | None:intergenic | 70.0% | |
| GCTGGCCATGGGGAGTTGGG+TGG | - | chr1.3:76817570-76817589 | MS.gene056265:CDS | 70.0% | |
| TAACCGCCTTGCCGCCTCCG+AGG | - | chr1.3:76815137-76815156 | MS.gene056265:CDS | 70.0% | |
| TCGGAGGCGGCAAGGCGGTT+AGG | + | chr1.3:76815138-76815157 | None:intergenic | 70.0% | |
| TGACCTCGGAGGCGGCAAGG+CGG | + | chr1.3:76815143-76815162 | None:intergenic | 70.0% | |
| CGGTGACCTCGGAGGCGGCA+AGG | + | chr1.3:76815146-76815165 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76815048 | 76818464 | 76815048 | ID=MS.gene056265 |
| chr1.3 | mRNA | 76815048 | 76818464 | 76815048 | ID=MS.gene056265.t1;Parent=MS.gene056265 |
| chr1.3 | exon | 76818354 | 76818464 | 76818354 | ID=MS.gene056265.t1.exon1;Parent=MS.gene056265.t1 |
| chr1.3 | CDS | 76818354 | 76818464 | 76818354 | ID=cds.MS.gene056265.t1;Parent=MS.gene056265.t1 |
| chr1.3 | exon | 76817979 | 76818230 | 76817979 | ID=MS.gene056265.t1.exon2;Parent=MS.gene056265.t1 |
| chr1.3 | CDS | 76817979 | 76818230 | 76817979 | ID=cds.MS.gene056265.t1;Parent=MS.gene056265.t1 |
| chr1.3 | exon | 76817746 | 76817889 | 76817746 | ID=MS.gene056265.t1.exon3;Parent=MS.gene056265.t1 |
| chr1.3 | CDS | 76817746 | 76817889 | 76817746 | ID=cds.MS.gene056265.t1;Parent=MS.gene056265.t1 |
| chr1.3 | exon | 76816914 | 76817666 | 76816914 | ID=MS.gene056265.t1.exon4;Parent=MS.gene056265.t1 |
| chr1.3 | CDS | 76816914 | 76817666 | 76816914 | ID=cds.MS.gene056265.t1;Parent=MS.gene056265.t1 |
| chr1.3 | exon | 76815048 | 76815278 | 76815048 | ID=MS.gene056265.t1.exon5;Parent=MS.gene056265.t1 |
| chr1.3 | CDS | 76815048 | 76815278 | 76815048 | ID=cds.MS.gene056265.t1;Parent=MS.gene056265.t1 |
| Gene Sequence |
| Protein sequence |
