Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056624.t1 | XP_013456325.2 | 86.1 | 509 | 67 | 2 | 1 | 508 | 1 | 506 | 1.90E-192 | 682.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056624.t1 | O48716 | 49.7 | 453 | 197 | 9 | 22 | 473 | 6 | 428 | 4.5e-78 | 293.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056624.t1 | A0A396IEE4 | 86.1 | 509 | 67 | 2 | 1 | 508 | 1 | 506 | 1.4e-192 | 682.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056624 | MS.gene40638 | 0.892391 | 1.66E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene021991 | MS.gene056624 | PPI |
| MS.gene034624 | MS.gene056624 | PPI |
| MS.gene49091 | MS.gene056624 | PPI |
| MS.gene056624 | MS.gene007856 | PPI |
| MS.gene056624 | MS.gene027729 | PPI |
| MS.gene44717 | MS.gene056624 | PPI |
| MS.gene056624 | MS.gene032322 | PPI |
| MS.gene056316 | MS.gene056624 | PPI |
| MS.gene32239 | MS.gene056624 | PPI |
| MS.gene86222 | MS.gene056624 | PPI |
| MS.gene44289 | MS.gene056624 | PPI |
| MS.gene056624 | MS.gene39202 | PPI |
| MS.gene056624 | MS.gene41434 | PPI |
| MS.gene46486 | MS.gene056624 | PPI |
| MS.gene006293 | MS.gene056624 | PPI |
| MS.gene49890 | MS.gene056624 | PPI |
| MS.gene056624 | MS.gene34495 | PPI |
| MS.gene38997 | MS.gene056624 | PPI |
| MS.gene29165 | MS.gene056624 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056624.t1 | MTR_4g068457 | 96.806 | 501 | 12 | 2 | 9 | 508 | 1 | 498 | 0.0 | 1000 |
| MS.gene056624.t1 | MTR_1g021590 | 59.009 | 444 | 150 | 8 | 24 | 465 | 20 | 433 | 2.25e-176 | 504 |
| MS.gene056624.t1 | MTR_5g018520 | 52.360 | 445 | 175 | 8 | 24 | 468 | 17 | 424 | 1.20e-159 | 461 |
| MS.gene056624.t1 | MTR_3g078380 | 39.474 | 342 | 186 | 10 | 141 | 463 | 70 | 409 | 1.21e-74 | 242 |
| MS.gene056624.t1 | MTR_4g106480 | 38.192 | 343 | 190 | 6 | 138 | 463 | 59 | 396 | 4.90e-73 | 237 |
| MS.gene056624.t1 | MTR_5g035980 | 38.710 | 372 | 179 | 8 | 139 | 463 | 74 | 443 | 6.40e-73 | 238 |
| MS.gene056624.t1 | MTR_5g035980 | 22.933 | 375 | 213 | 14 | 36 | 365 | 99 | 442 | 7.72e-12 | 67.8 |
| MS.gene056624.t1 | MTR_3g110185 | 41.228 | 342 | 181 | 8 | 129 | 463 | 81 | 409 | 2.25e-72 | 246 |
| MS.gene056624.t1 | MTR_8g089650 | 37.222 | 360 | 205 | 8 | 116 | 464 | 80 | 429 | 1.52e-70 | 232 |
| MS.gene056624.t1 | MTR_2g060070 | 37.537 | 341 | 197 | 7 | 129 | 466 | 57 | 384 | 7.51e-70 | 229 |
| MS.gene056624.t1 | MTR_4g104410 | 39.339 | 333 | 187 | 8 | 138 | 463 | 39 | 363 | 3.86e-69 | 226 |
| MS.gene056624.t1 | MTR_2g101410 | 35.714 | 350 | 201 | 10 | 131 | 469 | 79 | 415 | 4.44e-62 | 209 |
| MS.gene056624.t1 | MTR_8g028700 | 25.723 | 311 | 195 | 13 | 121 | 408 | 214 | 511 | 2.32e-14 | 75.9 |
| MS.gene056624.t1 | MTR_8g032850 | 25.490 | 306 | 200 | 12 | 121 | 408 | 601 | 896 | 2.53e-13 | 73.2 |
| MS.gene056624.t1 | MTR_4g119620 | 25.877 | 228 | 133 | 9 | 245 | 461 | 119 | 321 | 3.31e-12 | 68.2 |
| MS.gene056624.t1 | MTR_8g104010 | 29.018 | 224 | 133 | 10 | 238 | 461 | 906 | 1103 | 7.00e-12 | 68.6 |
| MS.gene056624.t1 | MTR_8g104010 | 29.018 | 224 | 133 | 10 | 238 | 461 | 543 | 740 | 7.10e-12 | 68.6 |
| MS.gene056624.t1 | MTR_8g104010 | 29.018 | 224 | 133 | 10 | 238 | 461 | 626 | 823 | 7.32e-12 | 68.6 |
| MS.gene056624.t1 | MTR_6g465150 | 27.027 | 222 | 133 | 8 | 245 | 465 | 149 | 342 | 2.49e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056624.t1 | AT1G49450 | 53.036 | 494 | 173 | 10 | 9 | 467 | 1 | 470 | 5.07e-176 | 504 |
| MS.gene056624.t1 | AT3G18950 | 55.819 | 464 | 173 | 9 | 26 | 467 | 15 | 468 | 3.47e-175 | 501 |
| MS.gene056624.t1 | AT2G26490 | 58.427 | 445 | 154 | 9 | 22 | 465 | 6 | 420 | 2.96e-174 | 499 |
| MS.gene056624.t1 | AT4G34380 | 53.707 | 499 | 172 | 11 | 1 | 473 | 1 | 466 | 5.98e-169 | 486 |
| MS.gene056624.t1 | AT3G50390 | 56.533 | 398 | 161 | 7 | 79 | 470 | 40 | 431 | 2.57e-155 | 451 |
| MS.gene056624.t1 | AT1G47610 | 62.644 | 348 | 121 | 6 | 122 | 466 | 10 | 351 | 8.11e-146 | 422 |
| MS.gene056624.t1 | AT1G24130 | 42.340 | 359 | 177 | 8 | 129 | 464 | 62 | 413 | 1.68e-81 | 259 |
| MS.gene056624.t1 | AT5G50120 | 37.306 | 386 | 213 | 10 | 105 | 463 | 1 | 384 | 4.66e-78 | 250 |
| MS.gene056624.t1 | AT3G51930 | 39.205 | 352 | 192 | 9 | 129 | 466 | 54 | 397 | 6.87e-73 | 237 |
| MS.gene056624.t1 | AT1G24530 | 39.169 | 337 | 186 | 7 | 139 | 469 | 86 | 409 | 1.41e-72 | 236 |
| MS.gene056624.t1 | AT3G49660 | 26.522 | 230 | 131 | 9 | 243 | 461 | 110 | 312 | 2.52e-14 | 74.3 |
Find 127 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGTGCTATTGTTATTAT+TGG | 0.191878 | 4.3:-36568108 | None:intergenic |
| CTGATGGATTGGTTAACTTC+TGG | 0.213175 | 4.3:+36569134 | MS.gene056624:CDS |
| TGAAGAAAAGCACCAAATTT+TGG | 0.220431 | 4.3:-36568143 | None:intergenic |
| GAAGGAGGGTTGTTGTATTC+AGG | 0.272535 | 4.3:+36568833 | MS.gene056624:CDS |
| TTGCTGACATTGATTGTTCC+TGG | 0.283768 | 4.3:-36569538 | None:intergenic |
| GAAGAAAACGAAGCATGTTT+TGG | 0.284274 | 4.3:+36569030 | MS.gene056624:CDS |
| GATAGTTTATACTGGTAGTT+TGG | 0.292066 | 4.3:+36569405 | MS.gene056624:CDS |
| TGATGGATTGGTTAACTTCT+GGG | 0.293708 | 4.3:+36569135 | MS.gene056624:CDS |
| GACAGCTATTTCCCGGAAAA+TGG | 0.300025 | 4.3:+36568422 | MS.gene056624:CDS |
| CGGACTTCTACGTAGTTCTT+TGG | 0.319774 | 4.3:-36568746 | None:intergenic |
| ATCTACTCCTTAGCTGTTTC+CGG | 0.320623 | 4.3:+36568479 | MS.gene056624:CDS |
| AAAATACATAGACCAAAATT+TGG | 0.321005 | 4.3:+36568131 | MS.gene056624:CDS |
| GGCGGTGGCTGTGGTGGTAT+TGG | 0.328170 | 4.3:-36568382 | None:intergenic |
| CATGGAGATAACATGTAATT+AGG | 0.330276 | 4.3:-36568287 | None:intergenic |
| AATTCTCCAATTGCACCTAT+TGG | 0.339564 | 4.3:+36569493 | MS.gene056624:CDS |
| TGAGAGGAGAAGAAGTTTCT+TGG | 0.355008 | 4.3:-36568313 | None:intergenic |
| GTCCTATGTCTCGCCGCGGC+AGG | 0.371031 | 4.3:+36569217 | MS.gene056624:CDS |
| CACTGTTCCATCGGCTGAGC+CGG | 0.383779 | 4.3:-36568975 | None:intergenic |
| TGCTGTTTCGAGTCTGAGTT+TGG | 0.386320 | 4.3:+36568805 | MS.gene056624:CDS |
| TAATTCAATCCTTTGCCAAT+AGG | 0.387828 | 4.3:-36569508 | None:intergenic |
| GGGATAGAACTCTCAAAGTT+TGG | 0.406373 | 4.3:+36568861 | MS.gene056624:CDS |
| TCTCAAAGTTTGGCGCGTTA+CGG | 0.407654 | 4.3:+36568871 | MS.gene056624:CDS |
| ACCACTGCTTGATTTAAAAC+CGG | 0.411447 | 4.3:-36568567 | None:intergenic |
| CCTTTGCCAATAGGTGCAAT+TGG | 0.413227 | 4.3:-36569499 | None:intergenic |
| CGTTACGGATTTCAAGTGTA+TGG | 0.422165 | 4.3:+36568886 | MS.gene056624:CDS |
| TCTAGAAATCATAAGCGTAT+TGG | 0.424001 | 4.3:+36568680 | MS.gene056624:CDS |
| CTGAACATGCGCCAGAGTTA+AGG | 0.425735 | 4.3:+36569455 | MS.gene056624:CDS |
| TCAGCAACAATAGTAATAGA+AGG | 0.431187 | 4.3:+36569554 | MS.gene056624:CDS |
| GGAGAGACATCGACGGAAAA+GGG | 0.432076 | 4.3:+36569008 | MS.gene056624:CDS |
| GCCTTGATCATCATCGTTGT+TGG | 0.434698 | 4.3:-36568192 | None:intergenic |
| TTGCGGTTCTTCTGATGGAT+TGG | 0.439337 | 4.3:+36569123 | MS.gene056624:CDS |
| TAGTTTGGATAAGTCTGTTA+AGG | 0.440081 | 4.3:+36569420 | MS.gene056624:CDS |
| TTATAACGACAGCTATTTCC+CGG | 0.443220 | 4.3:+36568415 | MS.gene056624:CDS |
| CCACACGCAAACATTCTTAT+CGG | 0.444510 | 4.3:-36569263 | None:intergenic |
| TTGACATAGTCTTTGAAAGT+TGG | 0.447390 | 4.3:-36568710 | None:intergenic |
| CATTGAATGACAAACACAAA+AGG | 0.448171 | 4.3:+36568059 | None:intergenic |
| TGCTGACATTGATTGTTCCT+GGG | 0.450251 | 4.3:-36569537 | None:intergenic |
| ATTTATTGCGGTTCTTCTGA+TGG | 0.451965 | 4.3:+36569118 | MS.gene056624:CDS |
| TTCCCGGAAAATGGCCTCAT+CGG | 0.452524 | 4.3:+36568431 | MS.gene056624:CDS |
| AGGCCGAGGCGTTGCTAATA+CGG | 0.454700 | 4.3:-36568214 | None:intergenic |
| ACCGGTGAAGATGTTTCCTT+CGG | 0.460672 | 4.3:-36568612 | None:intergenic |
| AGGAGAGACATCGACGGAAA+AGG | 0.464125 | 4.3:+36569007 | MS.gene056624:CDS |
| TGTGGAGGCGCGACGATAGA+GGG | 0.465919 | 4.3:+36569281 | MS.gene056624:CDS |
| CAACGGTGGATAGTTTATAC+TGG | 0.469758 | 4.3:+36569397 | MS.gene056624:CDS |
| GAAGAAGTTTCTTGGTTCCA+TGG | 0.473762 | 4.3:-36568305 | None:intergenic |
| GGTTGTTGTATTCAGGTTCG+TGG | 0.475668 | 4.3:+36568840 | MS.gene056624:CDS |
| TTCAACGGCAATGCATTTGA+CGG | 0.476271 | 4.3:-36569344 | None:intergenic |
| AATCGTTGATGAATGGTTAA+CGG | 0.476756 | 4.3:-36569095 | None:intergenic |
| TCCCGGAAAATGGCCTCATC+GGG | 0.480547 | 4.3:+36568432 | MS.gene056624:CDS |
| AATAAATAATCGTTGATGAA+TGG | 0.482054 | 4.3:-36569102 | None:intergenic |
| TCAACGGCAATGCATTTGAC+GGG | 0.487757 | 4.3:-36569343 | None:intergenic |
| TGGATAAGTCTGTTAAGGTC+TGG | 0.488240 | 4.3:+36569425 | MS.gene056624:CDS |
| TGTTGTCGTGGCGGTGGCTG+TGG | 0.492689 | 4.3:-36568391 | None:intergenic |
| AGGTTGATTGCTTCTGATGA+TGG | 0.495947 | 4.3:-36568356 | None:intergenic |
| TCCTATGTCTCGCCGCGGCA+GGG | 0.498073 | 4.3:+36569218 | MS.gene056624:CDS |
| ACCAGTGTGTCCCGTCAAAA+CGG | 0.506792 | 4.3:-36569320 | None:intergenic |
| TATAATTGTTGTCGTGGCGG+TGG | 0.508719 | 4.3:-36568397 | None:intergenic |
| GGCTGTGGTGGTATTGGAAG+AGG | 0.508925 | 4.3:-36568376 | None:intergenic |
| AAAGAACTTAAAGATTATAC+CGG | 0.508943 | 4.3:+36568548 | MS.gene056624:CDS |
| CCAATTGCACCTATTGGCAA+AGG | 0.511651 | 4.3:+36569499 | MS.gene056624:CDS |
| TCCCTGCCGCGGCGAGACAT+AGG | 0.512835 | 4.3:-36569219 | None:intergenic |
| ATCTTCACCGGTCACCAAGA+TGG | 0.520474 | 4.3:+36568623 | MS.gene056624:CDS |
| GGTGTGAAATAACGAGGGTT+CGG | 0.520624 | 4.3:-36568168 | None:intergenic |
| CCACATCTTCACTGTTCCAT+CGG | 0.523320 | 4.3:-36568984 | None:intergenic |
| AACCATGGTGATTTGTTGAG+AGG | 0.523351 | 4.3:-36568329 | None:intergenic |
| GTGTGGAGGCGCGACGATAG+AGG | 0.523354 | 4.3:+36569280 | MS.gene056624:CDS |
| GGTGTTTCTCTCTACTAACA+TGG | 0.528485 | 4.3:-36568087 | None:intergenic |
| GGATTGAATTATTCTTCCCC+AGG | 0.531004 | 4.3:+36569520 | MS.gene056624:CDS |
| CAAAGAACTACGTAGAAGTC+CGG | 0.531424 | 4.3:+36568747 | MS.gene056624:CDS |
| CTGTCACCGAAGTATGTTCG+AGG | 0.532181 | 4.3:-36568242 | None:intergenic |
| AGGATGATCGCGATGATCAA+CGG | 0.538331 | 4.3:+36569380 | MS.gene056624:CDS |
| CTAATTACATGTTATCTCCA+TGG | 0.539785 | 4.3:+36568288 | MS.gene056624:CDS |
| AGTTAAGGTTGATGCAAGGT+TGG | 0.541351 | 4.3:+36569470 | MS.gene056624:CDS |
| GGGTCACTAGCTCGCGAAGA+AGG | 0.547475 | 4.3:+36568452 | MS.gene056624:CDS |
| TGTTCGAGGACTCGAGGCCG+AGG | 0.549156 | 4.3:-36568228 | None:intergenic |
| GTTGTTGTATTCAGGTTCGT+GGG | 0.553014 | 4.3:+36568841 | MS.gene056624:CDS |
| ACCAACAACGATGATGATCA+AGG | 0.553556 | 4.3:+36568191 | MS.gene056624:CDS |
| TCACCGTGTTTCTACGTCGC+CGG | 0.558845 | 4.3:-36568766 | None:intergenic |
| AAAACCATTGTTATCTCCGA+AGG | 0.559695 | 4.3:+36568596 | MS.gene056624:CDS |
| TTGATCATCATCGTTGTTGG+TGG | 0.562709 | 4.3:-36568189 | None:intergenic |
| CGTTGAAGAACATGAGGAGG+AGG | 0.565627 | 4.3:+36569360 | MS.gene056624:CDS |
| CTCCTCCTCATGTTCTTCAA+CGG | 0.566912 | 4.3:-36569359 | None:intergenic |
| ATAAGAATGTTTGCGTGTGG+AGG | 0.574109 | 4.3:+36569266 | MS.gene056624:CDS |
| CTGAGTTTGGATCAAGAAGG+AGG | 0.576458 | 4.3:+36568818 | MS.gene056624:CDS |
| TCCGAAGGAAACATCTTCAC+CGG | 0.578285 | 4.3:+36568611 | MS.gene056624:CDS |
| CCTTGCATCAACCTTAACTC+TGG | 0.578888 | 4.3:-36569466 | None:intergenic |
| GGTTTGAAATGCTGCAACCA+CGG | 0.587053 | 4.3:-36568942 | None:intergenic |
| TGAATGACAAACACAAAAGG+TGG | 0.588072 | 4.3:+36568062 | None:intergenic |
| TGTCGTTATAATTGTTGTCG+TGG | 0.588164 | 4.3:-36568403 | None:intergenic |
| TCATCAACGATTATTTATTG+CGG | 0.596640 | 4.3:+36569106 | MS.gene056624:CDS |
| CATGTCACCGGAAACAGCTA+AGG | 0.598475 | 4.3:-36568486 | None:intergenic |
| CCGATGGAACAGTGAAGATG+TGG | 0.598551 | 4.3:+36568984 | MS.gene056624:CDS |
| GCTGACATTGATTGTTCCTG+GGG | 0.599863 | 4.3:-36569536 | None:intergenic |
| GAAACAAGAAAACGCTGTGA+CGG | 0.601740 | 4.3:+36569066 | MS.gene056624:CDS |
| TGTCGTGGCGGTGGCTGTGG+TGG | 0.601834 | 4.3:-36568388 | None:intergenic |
| TCCGGTGACATGTTATACAC+CGG | 0.604467 | 4.3:+36568497 | MS.gene056624:CDS |
| TCGAGTCCTCGAACATACTT+CGG | 0.609319 | 4.3:+36568236 | MS.gene056624:CDS |
| CCGATAAGAATGTTTGCGTG+TGG | 0.609682 | 4.3:+36569263 | MS.gene056624:CDS |
| TGCCGTTGAAGAACATGAGG+AGG | 0.611530 | 4.3:+36569357 | MS.gene056624:CDS |
| TTAAAACACCGCCGTGAGTG+AGG | 0.611554 | 4.3:-36569177 | None:intergenic |
| AGGCCGTATTAGCAACGCCT+CGG | 0.624005 | 4.3:+36568211 | MS.gene056624:CDS |
| TGAGTTTGGATCAAGAAGGA+GGG | 0.624574 | 4.3:+36568819 | MS.gene056624:CDS |
| ACCGGTGTATAACATGTCAC+CGG | 0.625134 | 4.3:-36568498 | None:intergenic |
| GTGGAGGCGCGACGATAGAG+GGG | 0.628633 | 4.3:+36569282 | MS.gene056624:CDS |
| ATGGAACAGTGAAGATGTGG+AGG | 0.633593 | 4.3:+36568987 | MS.gene056624:CDS |
| GTTTCCTTCGGAGATAACAA+TGG | 0.634476 | 4.3:-36568600 | None:intergenic |
| CAGAAGAATAACCTCACTCA+CGG | 0.641267 | 4.3:+36569166 | MS.gene056624:CDS |
| CATTGCCGTTGAAGAACATG+AGG | 0.644581 | 4.3:+36569354 | MS.gene056624:CDS |
| GAAGTATGTTCGAGGACTCG+AGG | 0.646088 | 4.3:-36568234 | None:intergenic |
| CCAGAGTTAAGGTTGATGCA+AGG | 0.650036 | 4.3:+36569466 | MS.gene056624:CDS |
| AGTCTGAGTTTGGATCAAGA+AGG | 0.656181 | 4.3:+36568815 | MS.gene056624:CDS |
| GCGACGTAGAAACACGGTGA+AGG | 0.656210 | 4.3:+36568769 | MS.gene056624:CDS |
| CGCGAGCTAGTGACCCGATG+AGG | 0.657515 | 4.3:-36568445 | None:intergenic |
| CACGCAAACATTCTTATCGG+CGG | 0.663813 | 4.3:-36569260 | None:intergenic |
| CGCAGTCCTATGTCTCGCCG+CGG | 0.677705 | 4.3:+36569213 | MS.gene056624:CDS |
| ATGTGGAGGAGAGACATCGA+CGG | 0.680232 | 4.3:+36569001 | MS.gene056624:CDS |
| CTCCTCTCAACAAATCACCA+TGG | 0.687284 | 4.3:+36568327 | MS.gene056624:CDS |
| CGTTATAATTGTTGTCGTGG+CGG | 0.693088 | 4.3:-36568400 | None:intergenic |
| GTTGGTGGTGTGAAATAACG+AGG | 0.700463 | 4.3:-36568174 | None:intergenic |
| TCTGATGATGGCATTAACCA+TGG | 0.701204 | 4.3:-36568344 | None:intergenic |
| AGTCCGGCGACGTAGAAACA+CGG | 0.702669 | 4.3:+36568763 | MS.gene056624:CDS |
| ATGATCGCGATGATCAACGG+TGG | 0.708309 | 4.3:+36569383 | MS.gene056624:CDS |
| GAAAACAAGATTCCCTGCCG+CGG | 0.715565 | 4.3:-36569230 | None:intergenic |
| GGCTGAGCCGGTGAAAACGT+AGG | 0.729585 | 4.3:-36568963 | None:intergenic |
| TTGGTGGTGTGAAATAACGA+GGG | 0.733290 | 4.3:-36568173 | None:intergenic |
| TGATGACGCAGTGAACGCCG+TGG | 0.743023 | 4.3:+36568925 | MS.gene056624:CDS |
| AAGAATAACCTCACTCACGG+CGG | 0.746398 | 4.3:+36569169 | MS.gene056624:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACATAGACCAAAATT+TGG | + | chr4.3:36568131-36568150 | MS.gene056624:CDS | 20.0% |
| !! | AAAGAACTTAAAGATTATAC+CGG | + | chr4.3:36568548-36568567 | MS.gene056624:CDS | 20.0% |
| !!! | AATAAATAATCGTTGATGAA+TGG | - | chr4.3:36569105-36569124 | None:intergenic | 20.0% |
| ! | TCATCAACGATTATTTATTG+CGG | + | chr4.3:36569106-36569125 | MS.gene056624:CDS | 25.0% |
| !! | TTGAAGAAATTTTCCAAACT+CGG | - | chr4.3:36568655-36568674 | None:intergenic | 25.0% |
| !! | TTTTGGTCTATGTATTTTGT+TGG | - | chr4.3:36568129-36568148 | None:intergenic | 25.0% |
| CATGGAGATAACATGTAATT+AGG | - | chr4.3:36568290-36568309 | None:intergenic | 30.0% | |
| CTAATTACATGTTATCTCCA+TGG | + | chr4.3:36568288-36568307 | MS.gene056624:CDS | 30.0% | |
| GATAGTTTATACTGGTAGTT+TGG | + | chr4.3:36569405-36569424 | MS.gene056624:CDS | 30.0% | |
| TAATTCAATCCTTTGCCAAT+AGG | - | chr4.3:36569511-36569530 | None:intergenic | 30.0% | |
| TACCGATAGCAAAAACATAA+GGG | + | chr4.3:36568520-36568539 | MS.gene056624:CDS | 30.0% | |
| TAGTTTGGATAAGTCTGTTA+AGG | + | chr4.3:36569420-36569439 | MS.gene056624:CDS | 30.0% | |
| TCAGCAACAATAGTAATAGA+AGG | + | chr4.3:36569554-36569573 | MS.gene056624:CDS | 30.0% | |
| TCTAGAAATCATAAGCGTAT+TGG | + | chr4.3:36568680-36568699 | MS.gene056624:CDS | 30.0% | |
| ! | AATCGTTGATGAATGGTTAA+CGG | - | chr4.3:36569098-36569117 | None:intergenic | 30.0% |
| ! | TTGACATAGTCTTTGAAAGT+TGG | - | chr4.3:36568713-36568732 | None:intergenic | 30.0% |
| ! | TTTTAAATCAAGCAGTGGTT+TGG | + | chr4.3:36568571-36568590 | MS.gene056624:CDS | 30.0% |
| !! | GTTGGTGCTATTGTTATTAT+TGG | - | chr4.3:36568111-36568130 | None:intergenic | 30.0% |
| !!! | TGAAGAAAAGCACCAAATTT+TGG | - | chr4.3:36568146-36568165 | None:intergenic | 30.0% |
| AAAACCATTGTTATCTCCGA+AGG | + | chr4.3:36568596-36568615 | MS.gene056624:CDS | 35.0% | |
| AAGATGGAAAAATCCGAGTT+TGG | + | chr4.3:36568639-36568658 | MS.gene056624:CDS | 35.0% | |
| AATTCTCCAATTGCACCTAT+TGG | + | chr4.3:36569493-36569512 | MS.gene056624:CDS | 35.0% | |
| ATAGCAAAAACATAAGGGTG+TGG | + | chr4.3:36568525-36568544 | MS.gene056624:CDS | 35.0% | |
| ATTTATTGCGGTTCTTCTGA+TGG | + | chr4.3:36569118-36569137 | MS.gene056624:CDS | 35.0% | |
| TGTCGTTATAATTGTTGTCG+TGG | - | chr4.3:36568406-36568425 | None:intergenic | 35.0% | |
| ! | AAACTCGGATTTTTCCATCT+TGG | - | chr4.3:36568640-36568659 | None:intergenic | 35.0% |
| ! | ACCACTGCTTGATTTAAAAC+CGG | - | chr4.3:36568570-36568589 | None:intergenic | 35.0% |
| ! | CATTTGTCTTTCCGTTTTGA+CGG | + | chr4.3:36569309-36569328 | MS.gene056624:CDS | 35.0% |
| ! | GAAGAAAACGAAGCATGTTT+TGG | + | chr4.3:36569030-36569049 | MS.gene056624:CDS | 35.0% |
| ! | GTACCGATAGCAAAAACATA+AGG | + | chr4.3:36568519-36568538 | MS.gene056624:CDS | 35.0% |
| ! | TTATAACGACAGCTATTTCC+CGG | + | chr4.3:36568415-36568434 | MS.gene056624:CDS | 35.0% |
| ! | TTTCAAACCTACGTTTTCAC+CGG | + | chr4.3:36568956-36568975 | MS.gene056624:CDS | 35.0% |
| !! | AAACGAAGCATGTTTTGGAT+AGG | + | chr4.3:36569035-36569054 | MS.gene056624:CDS | 35.0% |
| !! | ATTTGTCTTTCCGTTTTGAC+GGG | + | chr4.3:36569310-36569329 | MS.gene056624:CDS | 35.0% |
| !! | CACCCTTATGTTTTTGCTAT+CGG | - | chr4.3:36568525-36568544 | None:intergenic | 35.0% |
| !! | TATGTTTTTGCTATCGGTAC+CGG | - | chr4.3:36568519-36568538 | None:intergenic | 35.0% |
| !! | TGATGGATTGGTTAACTTCT+GGG | + | chr4.3:36569135-36569154 | MS.gene056624:CDS | 35.0% |
| ACCAACAACGATGATGATCA+AGG | + | chr4.3:36568191-36568210 | MS.gene056624:CDS | 40.0% | |
| AGTCTGAGTTTGGATCAAGA+AGG | + | chr4.3:36568815-36568834 | MS.gene056624:CDS | 40.0% | |
| ATAAGAATGTTTGCGTGTGG+AGG | + | chr4.3:36569266-36569285 | MS.gene056624:CDS | 40.0% | |
| CAAAGAACTACGTAGAAGTC+CGG | + | chr4.3:36568747-36568766 | MS.gene056624:CDS | 40.0% | |
| CAACGGTGGATAGTTTATAC+TGG | + | chr4.3:36569397-36569416 | MS.gene056624:CDS | 40.0% | |
| CAGAAGAATAACCTCACTCA+CGG | + | chr4.3:36569166-36569185 | MS.gene056624:CDS | 40.0% | |
| CCACACGCAAACATTCTTAT+CGG | - | chr4.3:36569266-36569285 | None:intergenic | 40.0% | |
| CGTTATAATTGTTGTCGTGG+CGG | - | chr4.3:36568403-36568422 | None:intergenic | 40.0% | |
| GAAACAAGAAAACGCTGTGA+CGG | + | chr4.3:36569066-36569085 | MS.gene056624:CDS | 40.0% | |
| GAAGAAGTTTCTTGGTTCCA+TGG | - | chr4.3:36568308-36568327 | None:intergenic | 40.0% | |
| GGATTGAATTATTCTTCCCC+AGG | + | chr4.3:36569520-36569539 | MS.gene056624:CDS | 40.0% | |
| GGGATAGAACTCTCAAAGTT+TGG | + | chr4.3:36568861-36568880 | MS.gene056624:CDS | 40.0% | |
| GGTGTTTCTCTCTACTAACA+TGG | - | chr4.3:36568090-36568109 | None:intergenic | 40.0% | |
| GTTTCCTTCGGAGATAACAA+TGG | - | chr4.3:36568603-36568622 | None:intergenic | 40.0% | |
| TGAGAGGAGAAGAAGTTTCT+TGG | - | chr4.3:36568316-36568335 | None:intergenic | 40.0% | |
| TGAGTTTGGATCAAGAAGGA+GGG | + | chr4.3:36568819-36568838 | MS.gene056624:CDS | 40.0% | |
| TGGATAAGTCTGTTAAGGTC+TGG | + | chr4.3:36569425-36569444 | MS.gene056624:CDS | 40.0% | |
| TTCAACGGCAATGCATTTGA+CGG | - | chr4.3:36569347-36569366 | None:intergenic | 40.0% | |
| TTGATCATCATCGTTGTTGG+TGG | - | chr4.3:36568192-36568211 | None:intergenic | 40.0% | |
| ! | AGGTTGATTGCTTCTGATGA+TGG | - | chr4.3:36568359-36568378 | None:intergenic | 40.0% |
| ! | ATCTACTCCTTAGCTGTTTC+CGG | + | chr4.3:36568479-36568498 | MS.gene056624:CDS | 40.0% |
| ! | CGTTACGGATTTCAAGTGTA+TGG | + | chr4.3:36568886-36568905 | MS.gene056624:CDS | 40.0% |
| ! | GTTGTTGTATTCAGGTTCGT+GGG | + | chr4.3:36568841-36568860 | MS.gene056624:CDS | 40.0% |
| ! | TGCTGACATTGATTGTTCCT+GGG | - | chr4.3:36569540-36569559 | None:intergenic | 40.0% |
| ! | TTGCTGACATTGATTGTTCC+TGG | - | chr4.3:36569541-36569560 | None:intergenic | 40.0% |
| !! | AACCATGGTGATTTGTTGAG+AGG | - | chr4.3:36568332-36568351 | None:intergenic | 40.0% |
| !! | AGTTAAGGTTGATGCAAGGT+TGG | + | chr4.3:36569470-36569489 | MS.gene056624:CDS | 40.0% |
| !! | CTGATGGATTGGTTAACTTC+TGG | + | chr4.3:36569134-36569153 | MS.gene056624:CDS | 40.0% |
| !! | GATTTTTCCATCTTGGTGAC+CGG | - | chr4.3:36568633-36568652 | None:intergenic | 40.0% |
| !! | TCTGATGATGGCATTAACCA+TGG | - | chr4.3:36568347-36568366 | None:intergenic | 40.0% |
| !! | TTGGTGGTGTGAAATAACGA+GGG | - | chr4.3:36568176-36568195 | None:intergenic | 40.0% |
| !!! | ACCGGTTTTAAATCAAGCAG+TGG | + | chr4.3:36568566-36568585 | MS.gene056624:CDS | 40.0% |
| AAGAATAACCTCACTCACGG+CGG | + | chr4.3:36569169-36569188 | MS.gene056624:CDS | 45.0% | |
| ACCGGTGAAGATGTTTCCTT+CGG | - | chr4.3:36568615-36568634 | None:intergenic | 45.0% | |
| ACCGGTGTATAACATGTCAC+CGG | - | chr4.3:36568501-36568520 | None:intergenic | 45.0% | |
| AGGATGATCGCGATGATCAA+CGG | + | chr4.3:36569380-36569399 | MS.gene056624:CDS | 45.0% | |
| ATGGAACAGTGAAGATGTGG+AGG | + | chr4.3:36568987-36569006 | MS.gene056624:CDS | 45.0% | |
| CACGCAAACATTCTTATCGG+CGG | - | chr4.3:36569263-36569282 | None:intergenic | 45.0% | |
| CATTGCCGTTGAAGAACATG+AGG | + | chr4.3:36569354-36569373 | MS.gene056624:CDS | 45.0% | |
| CCAATTGCACCTATTGGCAA+AGG | + | chr4.3:36569499-36569518 | MS.gene056624:CDS | 45.0% | |
| CCACATCTTCACTGTTCCAT+CGG | - | chr4.3:36568987-36569006 | None:intergenic | 45.0% | |
| CCGATAAGAATGTTTGCGTG+TGG | + | chr4.3:36569263-36569282 | MS.gene056624:CDS | 45.0% | |
| CCTTGCATCAACCTTAACTC+TGG | - | chr4.3:36569469-36569488 | None:intergenic | 45.0% | |
| CCTTTGCCAATAGGTGCAAT+TGG | - | chr4.3:36569502-36569521 | None:intergenic | 45.0% | |
| CGGACTTCTACGTAGTTCTT+TGG | - | chr4.3:36568749-36568768 | None:intergenic | 45.0% | |
| CTCCTCCTCATGTTCTTCAA+CGG | - | chr4.3:36569362-36569381 | None:intergenic | 45.0% | |
| CTCCTCTCAACAAATCACCA+TGG | + | chr4.3:36568327-36568346 | MS.gene056624:CDS | 45.0% | |
| CTGAGTTTGGATCAAGAAGG+AGG | + | chr4.3:36568818-36568837 | MS.gene056624:CDS | 45.0% | |
| GAAGGAGGGTTGTTGTATTC+AGG | + | chr4.3:36568833-36568852 | MS.gene056624:CDS | 45.0% | |
| GCCTTGATCATCATCGTTGT+TGG | - | chr4.3:36568195-36568214 | None:intergenic | 45.0% | |
| GGTGTGAAATAACGAGGGTT+CGG | - | chr4.3:36568171-36568190 | None:intergenic | 45.0% | |
| TATAATTGTTGTCGTGGCGG+TGG | - | chr4.3:36568400-36568419 | None:intergenic | 45.0% | |
| TCAACGGCAATGCATTTGAC+GGG | - | chr4.3:36569346-36569365 | None:intergenic | 45.0% | |
| TCCGAAGGAAACATCTTCAC+CGG | + | chr4.3:36568611-36568630 | MS.gene056624:CDS | 45.0% | |
| TCCGGTGACATGTTATACAC+CGG | + | chr4.3:36568497-36568516 | MS.gene056624:CDS | 45.0% | |
| TCGAGTCCTCGAACATACTT+CGG | + | chr4.3:36568236-36568255 | MS.gene056624:CDS | 45.0% | |
| TCTCAAAGTTTGGCGCGTTA+CGG | + | chr4.3:36568871-36568890 | MS.gene056624:CDS | 45.0% | |
| ! | GACAGCTATTTCCCGGAAAA+TGG | + | chr4.3:36568422-36568441 | MS.gene056624:CDS | 45.0% |
| ! | GCTGACATTGATTGTTCCTG+GGG | - | chr4.3:36569539-36569558 | None:intergenic | 45.0% |
| ! | GGTTGTTGTATTCAGGTTCG+TGG | + | chr4.3:36568840-36568859 | MS.gene056624:CDS | 45.0% |
| ! | GGTTTGAAATGCTGCAACCA+CGG | - | chr4.3:36568945-36568964 | None:intergenic | 45.0% |
| ! | TTGCGGTTCTTCTGATGGAT+TGG | + | chr4.3:36569123-36569142 | MS.gene056624:CDS | 45.0% |
| !! | ACTCACGGCGGTGTTTTAAA+GGG | + | chr4.3:36569181-36569200 | MS.gene056624:CDS | 45.0% |
| !! | CCAGAGTTAAGGTTGATGCA+AGG | + | chr4.3:36569466-36569485 | MS.gene056624:CDS | 45.0% |
| !! | GTTGGTGGTGTGAAATAACG+AGG | - | chr4.3:36568177-36568196 | None:intergenic | 45.0% |
| !! | TGCTGTTTCGAGTCTGAGTT+TGG | + | chr4.3:36568805-36568824 | MS.gene056624:CDS | 45.0% |
| !!! | GCAGGGAATCTTGTTTTCAG+TGG | + | chr4.3:36569235-36569254 | MS.gene056624:CDS | 45.0% |
| ACCAGTGTGTCCCGTCAAAA+CGG | - | chr4.3:36569323-36569342 | None:intergenic | 50.0% | |
| AGGAGAGACATCGACGGAAA+AGG | + | chr4.3:36569007-36569026 | MS.gene056624:CDS | 50.0% | |
| ATCTTCACCGGTCACCAAGA+TGG | + | chr4.3:36568623-36568642 | MS.gene056624:CDS | 50.0% | |
| ATGATCGCGATGATCAACGG+TGG | + | chr4.3:36569383-36569402 | MS.gene056624:CDS | 50.0% | |
| ATGTGGAGGAGAGACATCGA+CGG | + | chr4.3:36569001-36569020 | MS.gene056624:CDS | 50.0% | |
| CATGTCACCGGAAACAGCTA+AGG | - | chr4.3:36568489-36568508 | None:intergenic | 50.0% | |
| CCGATGGAACAGTGAAGATG+TGG | + | chr4.3:36568984-36569003 | MS.gene056624:CDS | 50.0% | |
| CGTTGAAGAACATGAGGAGG+AGG | + | chr4.3:36569360-36569379 | MS.gene056624:CDS | 50.0% | |
| CTGAACATGCGCCAGAGTTA+AGG | + | chr4.3:36569455-36569474 | MS.gene056624:CDS | 50.0% | |
| CTGTCACCGAAGTATGTTCG+AGG | - | chr4.3:36568245-36568264 | None:intergenic | 50.0% | |
| GAAAACAAGATTCCCTGCCG+CGG | - | chr4.3:36569233-36569252 | None:intergenic | 50.0% | |
| GAAGTATGTTCGAGGACTCG+AGG | - | chr4.3:36568237-36568256 | None:intergenic | 50.0% | |
| GGAGAGACATCGACGGAAAA+GGG | + | chr4.3:36569008-36569027 | MS.gene056624:CDS | 50.0% | |
| TGCCGTTGAAGAACATGAGG+AGG | + | chr4.3:36569357-36569376 | MS.gene056624:CDS | 50.0% | |
| TTAAAACACCGCCGTGAGTG+AGG | - | chr4.3:36569180-36569199 | None:intergenic | 50.0% | |
| TTCCCGGAAAATGGCCTCAT+CGG | + | chr4.3:36568431-36568450 | MS.gene056624:CDS | 50.0% | |
| !! | CACTCACGGCGGTGTTTTAA+AGG | + | chr4.3:36569180-36569199 | MS.gene056624:CDS | 50.0% |
| AGGCCGTATTAGCAACGCCT+CGG | + | chr4.3:36568211-36568230 | MS.gene056624:CDS | 55.0% | |
| AGTCCGGCGACGTAGAAACA+CGG | + | chr4.3:36568763-36568782 | MS.gene056624:CDS | 55.0% | |
| GCGACGTAGAAACACGGTGA+AGG | + | chr4.3:36568769-36568788 | MS.gene056624:CDS | 55.0% | |
| TCCCGGAAAATGGCCTCATC+GGG | + | chr4.3:36568432-36568451 | MS.gene056624:CDS | 55.0% | |
| ! | GGCTGTGGTGGTATTGGAAG+AGG | - | chr4.3:36568379-36568398 | None:intergenic | 55.0% |
| ! | TCACCGTGTTTCTACGTCGC+CGG | - | chr4.3:36568769-36568788 | None:intergenic | 55.0% |
| !! | ACCCGATGAGGCCATTTTCC+GGG | - | chr4.3:36568436-36568455 | None:intergenic | 55.0% |
| !! | AGGCCGAGGCGTTGCTAATA+CGG | - | chr4.3:36568217-36568236 | None:intergenic | 55.0% |
| !! | GACCCGATGAGGCCATTTTC+CGG | - | chr4.3:36568437-36568456 | None:intergenic | 55.0% |
| !! | TCCGTTTTGACGGGACACAC+TGG | + | chr4.3:36569319-36569338 | MS.gene056624:CDS | 55.0% |
| GGCTGAGCCGGTGAAAACGT+AGG | - | chr4.3:36568966-36568985 | None:intergenic | 60.0% | |
| GGGTCACTAGCTCGCGAAGA+AGG | + | chr4.3:36568452-36568471 | MS.gene056624:CDS | 60.0% | |
| ! | CACTGTTCCATCGGCTGAGC+CGG | - | chr4.3:36568978-36568997 | None:intergenic | 60.0% |
| ! | TGATGACGCAGTGAACGCCG+TGG | + | chr4.3:36568925-36568944 | MS.gene056624:CDS | 60.0% |
| ! | TGTGGAGGCGCGACGATAGA+GGG | + | chr4.3:36569281-36569300 | MS.gene056624:CDS | 60.0% |
| !!! | GTTTTCACCGGCTCAGCCGA+TGG | + | chr4.3:36568968-36568987 | MS.gene056624:CDS | 60.0% |
| CGCAGTCCTATGTCTCGCCG+CGG | + | chr4.3:36569213-36569232 | MS.gene056624:CDS | 65.0% | |
| CGCGAGCTAGTGACCCGATG+AGG | - | chr4.3:36568448-36568467 | None:intergenic | 65.0% | |
| GGCGGTGGCTGTGGTGGTAT+TGG | - | chr4.3:36568385-36568404 | None:intergenic | 65.0% | |
| TCCTATGTCTCGCCGCGGCA+GGG | + | chr4.3:36569218-36569237 | MS.gene056624:CDS | 65.0% | |
| TGTTCGAGGACTCGAGGCCG+AGG | - | chr4.3:36568231-36568250 | None:intergenic | 65.0% | |
| TGTTGTCGTGGCGGTGGCTG+TGG | - | chr4.3:36568394-36568413 | None:intergenic | 65.0% | |
| ! | GTGGAGGCGCGACGATAGAG+GGG | + | chr4.3:36569282-36569301 | MS.gene056624:CDS | 65.0% |
| ! | GTGTGGAGGCGCGACGATAG+AGG | + | chr4.3:36569280-36569299 | MS.gene056624:CDS | 65.0% |
| GTCCTATGTCTCGCCGCGGC+AGG | + | chr4.3:36569217-36569236 | MS.gene056624:CDS | 70.0% | |
| TCCCTGCCGCGGCGAGACAT+AGG | - | chr4.3:36569222-36569241 | None:intergenic | 70.0% | |
| TGTCGTGGCGGTGGCTGTGG+TGG | - | chr4.3:36568391-36568410 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 36568065 | 36569591 | 36568065 | ID=MS.gene056624 |
| chr4.3 | mRNA | 36568065 | 36569591 | 36568065 | ID=MS.gene056624.t1;Parent=MS.gene056624 |
| chr4.3 | exon | 36568065 | 36569591 | 36568065 | ID=MS.gene056624.t1.exon1;Parent=MS.gene056624.t1 |
| chr4.3 | CDS | 36568065 | 36569591 | 36568065 | ID=cds.MS.gene056624.t1;Parent=MS.gene056624.t1 |
| Gene Sequence |
| Protein sequence |
