Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056793.t1 | RHN39888.1 | 99.6 | 249 | 1 | 0 | 1 | 249 | 1 | 249 | 8.30E-120 | 439.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056793.t1 | Q8LF97 | 80.5 | 220 | 40 | 2 | 1 | 220 | 1 | 217 | 1.2e-95 | 350.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056793.t1 | G7LBR1 | 99.6 | 249 | 1 | 0 | 1 | 249 | 1 | 249 | 6.0e-120 | 439.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056793 | MS.gene066434 | 0.956498 | 2.56E-114 | -1.69E-46 |
| MS.gene056793 | MS.gene51420 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene056793 | MS.gene69301 | 0.818304 | 2.10E-52 | -1.69E-46 |
| MS.gene056793 | MS.gene84830 | 0.941536 | 3.51E-101 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056793.t1 | MTR_8g030670 | 99.200 | 250 | 2 | 0 | 1 | 250 | 1 | 250 | 0.0 | 506 |
| MS.gene056793.t1 | MTR_7g077810 | 81.818 | 253 | 46 | 0 | 1 | 253 | 1 | 253 | 1.74e-140 | 398 |
| MS.gene056793.t1 | MTR_6g053620 | 67.871 | 249 | 79 | 1 | 1 | 249 | 1 | 248 | 1.83e-115 | 335 |
| MS.gene056793.t1 | MTR_6g053620 | 67.871 | 249 | 79 | 1 | 1 | 249 | 1 | 248 | 5.35e-115 | 334 |
| MS.gene056793.t1 | MTR_2g100825 | 78.095 | 210 | 37 | 5 | 12 | 219 | 5 | 207 | 2.90e-108 | 315 |
| MS.gene056793.t1 | MTR_2g100830 | 68.161 | 223 | 56 | 5 | 1 | 221 | 1 | 210 | 5.98e-100 | 294 |
| MS.gene056793.t1 | MTR_8g007185 | 72.574 | 237 | 61 | 4 | 10 | 242 | 3 | 239 | 6.79e-100 | 293 |
| MS.gene056793.t1 | MTR_8g007205 | 72.152 | 237 | 62 | 4 | 10 | 242 | 3 | 239 | 3.20e-99 | 291 |
| MS.gene056793.t1 | MTR_8g007195 | 62.911 | 213 | 71 | 4 | 8 | 215 | 1 | 210 | 3.99e-82 | 249 |
| MS.gene056793.t1 | MTR_7g036780 | 61.009 | 218 | 70 | 6 | 10 | 222 | 3 | 210 | 2.85e-78 | 236 |
| MS.gene056793.t1 | MTR_8g007220 | 57.255 | 255 | 89 | 8 | 1 | 246 | 1 | 244 | 1.04e-77 | 237 |
| MS.gene056793.t1 | MTR_3g061700 | 56.284 | 183 | 46 | 3 | 68 | 246 | 1 | 153 | 1.87e-49 | 162 |
| MS.gene056793.t1 | MTR_3g110048 | 32.381 | 105 | 64 | 1 | 62 | 159 | 47 | 151 | 6.68e-15 | 70.9 |
| MS.gene056793.t1 | MTR_7g094120 | 33.000 | 100 | 60 | 1 | 62 | 154 | 48 | 147 | 1.95e-14 | 69.3 |
| MS.gene056793.t1 | MTR_4g032400 | 30.216 | 139 | 86 | 4 | 18 | 150 | 14 | 147 | 1.98e-14 | 69.7 |
| MS.gene056793.t1 | MTR_7g094150 | 37.234 | 94 | 52 | 2 | 63 | 150 | 48 | 140 | 2.64e-14 | 68.9 |
| MS.gene056793.t1 | MTR_4g033460 | 29.224 | 219 | 127 | 7 | 18 | 213 | 12 | 225 | 4.65e-14 | 70.1 |
| MS.gene056793.t1 | MTR_7g094170 | 37.234 | 94 | 52 | 2 | 63 | 150 | 48 | 140 | 1.01e-13 | 67.4 |
| MS.gene056793.t1 | MTR_7g021400 | 34.409 | 93 | 56 | 1 | 63 | 150 | 48 | 140 | 1.03e-13 | 67.4 |
| MS.gene056793.t1 | MTR_4g032460 | 32.117 | 137 | 84 | 4 | 16 | 150 | 5 | 134 | 1.58e-13 | 66.6 |
| MS.gene056793.t1 | MTR_4g032450 | 29.371 | 143 | 90 | 4 | 18 | 154 | 26 | 163 | 1.73e-13 | 67.4 |
| MS.gene056793.t1 | MTR_8g468480 | 36.000 | 100 | 57 | 2 | 63 | 156 | 48 | 146 | 1.76e-13 | 67.0 |
| MS.gene056793.t1 | MTR_4g032510 | 39.785 | 93 | 54 | 2 | 63 | 154 | 50 | 141 | 1.80e-13 | 66.6 |
| MS.gene056793.t1 | MTR_1g099870 | 36.559 | 93 | 52 | 2 | 71 | 156 | 1 | 93 | 2.57e-13 | 64.7 |
| MS.gene056793.t1 | MTR_5g022710 | 30.147 | 136 | 85 | 3 | 20 | 150 | 9 | 139 | 2.97e-13 | 66.2 |
| MS.gene056793.t1 | MTR_5g022730 | 29.412 | 136 | 86 | 3 | 20 | 150 | 9 | 139 | 3.22e-13 | 65.9 |
| MS.gene056793.t1 | MTR_4g033455 | 30.612 | 147 | 89 | 4 | 20 | 160 | 14 | 153 | 3.83e-13 | 65.9 |
| MS.gene056793.t1 | MTR_8g056060 | 30.000 | 150 | 94 | 3 | 18 | 161 | 8 | 152 | 9.81e-13 | 64.7 |
| MS.gene056793.t1 | MTR_4g032500 | 37.500 | 96 | 59 | 1 | 64 | 159 | 51 | 145 | 2.56e-12 | 63.5 |
| MS.gene056793.t1 | MTR_7g021380 | 33.333 | 96 | 59 | 1 | 60 | 150 | 45 | 140 | 3.71e-12 | 63.2 |
| MS.gene056793.t1 | MTR_8g089730 | 32.584 | 89 | 48 | 1 | 62 | 150 | 14 | 90 | 5.68e-12 | 61.2 |
| MS.gene056793.t1 | MTR_5g085030 | 29.592 | 98 | 64 | 1 | 62 | 154 | 47 | 144 | 6.87e-11 | 59.7 |
| MS.gene056793.t1 | MTR_4g021390 | 29.091 | 110 | 72 | 2 | 41 | 145 | 26 | 134 | 8.55e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056793.t1 | AT3G61415 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 2.45e-128 | 368 |
| MS.gene056793.t1 | AT2G45950 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 3.60e-128 | 367 |
| MS.gene056793.t1 | AT2G45950 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 3.60e-128 | 367 |
| MS.gene056793.t1 | AT2G45950 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 3.60e-128 | 367 |
| MS.gene056793.t1 | AT3G61415 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 3.80e-128 | 367 |
| MS.gene056793.t1 | AT2G45950 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 1.28e-127 | 366 |
| MS.gene056793.t1 | AT2G45950 | 81.690 | 213 | 38 | 1 | 1 | 213 | 1 | 212 | 1.28e-127 | 366 |
| MS.gene056793.t1 | AT3G21850 | 34.058 | 138 | 84 | 4 | 20 | 154 | 8 | 141 | 2.60e-17 | 77.0 |
| MS.gene056793.t1 | AT2G03170 | 37.234 | 94 | 57 | 2 | 62 | 154 | 45 | 137 | 3.30e-14 | 68.6 |
| MS.gene056793.t1 | AT1G75950 | 31.690 | 142 | 81 | 3 | 20 | 150 | 8 | 144 | 3.62e-14 | 68.9 |
| MS.gene056793.t1 | AT4G34210 | 36.170 | 94 | 57 | 1 | 64 | 154 | 47 | 140 | 2.59e-13 | 66.2 |
| MS.gene056793.t1 | AT1G20140 | 29.747 | 158 | 93 | 5 | 15 | 160 | 5 | 156 | 7.89e-13 | 65.1 |
| MS.gene056793.t1 | AT5G42190 | 31.250 | 112 | 55 | 2 | 60 | 150 | 45 | 155 | 1.14e-12 | 65.1 |
| MS.gene056793.t1 | AT2G25700 | 29.814 | 161 | 89 | 6 | 15 | 160 | 5 | 156 | 1.25e-12 | 64.7 |
| MS.gene056793.t1 | AT4G34470 | 35.106 | 94 | 58 | 1 | 64 | 154 | 47 | 140 | 2.52e-12 | 63.5 |
| MS.gene056793.t1 | AT3G21830 | 27.143 | 140 | 94 | 2 | 18 | 154 | 6 | 140 | 3.12e-12 | 63.2 |
Find 48 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAGCTCTTTCCTCTTCT+TGG | 0.128563 | 8.4:+66443726 | None:intergenic |
| CAATCTCTTGTTCAACTTGT+TGG | 0.233800 | 8.4:+66444357 | None:intergenic |
| AATATTTCTTGACATATAAA+TGG | 0.241293 | 8.4:+66444323 | None:intergenic |
| ACAGAAGAATTCTTCTTTGA+AGG | 0.317375 | 8.4:-66441956 | MS.gene056793:CDS |
| AAGACATACTGAACAATTCT+TGG | 0.364803 | 8.4:+66444280 | None:intergenic |
| TGTCAAGAAATATTACAAAA+AGG | 0.366988 | 8.4:-66444314 | MS.gene056793:CDS |
| AGAATTAAGCTCAACATTGC+AGG | 0.377228 | 8.4:+66444242 | None:intergenic |
| TAAAGAGCGTGAGAGGATAA+AGG | 0.430215 | 8.4:-66443707 | MS.gene056793:intron |
| GAAGTTTGAAGCCACACATA+AGG | 0.447376 | 8.4:+66444392 | None:intergenic |
| CAGCCTTCAGTTAAAGCCAT+TGG | 0.449173 | 8.4:-66444000 | MS.gene056793:CDS |
| TGTCGATTTCATCAAGTACT+AGG | 0.451108 | 8.4:-66444212 | MS.gene056793:CDS |
| TTCCATTAATAAAAGACAAA+AGG | 0.453283 | 8.4:+66442897 | None:intergenic |
| TTTACAACAACCTTCTTATG+TGG | 0.473578 | 8.4:+66441922 | None:intergenic |
| GACACCTCTGTAAGATCATC+AGG | 0.476044 | 8.4:+66443900 | None:intergenic |
| ATCATCAGTTATGTTTCTCA+AGG | 0.487275 | 8.4:+66443780 | None:intergenic |
| GCTCTTGCTCGAATAATTGA+AGG | 0.493143 | 8.4:-66443960 | MS.gene056793:CDS |
| TATAATCCAGGAAGAGAAGC+TGG | 0.494548 | 8.4:-66443806 | MS.gene056793:intron |
| TCAAAGAAGAATTCTTCTGT+TGG | 0.501353 | 8.4:+66441959 | None:intergenic |
| TATTCGAGCAAGAGCACGAC+TGG | 0.501432 | 8.4:+66443968 | None:intergenic |
| AACTTGTTGGATTGATTCAT+CGG | 0.503720 | 8.4:+66444370 | None:intergenic |
| CCAGTTAGAATTTAATCTGC+GGG | 0.510673 | 8.4:+66441121 | None:intergenic |
| TAACTGATGATCCAAGGATA+AGG | 0.514531 | 8.4:-66443768 | MS.gene056793:CDS |
| ATCATCTGTACCACATAAGA+AGG | 0.516095 | 8.4:-66441932 | MS.gene056793:intron |
| TACTTTGTGATGCAGGGAAG+TGG | 0.521468 | 8.4:-66441153 | MS.gene056793:intron |
| TTTATTAATGGAAATGATGG+AGG | 0.529025 | 8.4:-66442887 | MS.gene056793:intron |
| CGGTTCAAAAGCCTTATCCT+TGG | 0.529113 | 8.4:+66443757 | None:intergenic |
| TTTCATGTTTCAGAATGTTG+AGG | 0.538493 | 8.4:-66442957 | MS.gene056793:intron |
| AAGAGCTTAAAGAGCGTGAG+AGG | 0.550859 | 8.4:-66443714 | MS.gene056793:CDS |
| CTTATGATGAGAAATTCGTT+AGG | 0.551402 | 8.4:-66444064 | MS.gene056793:CDS |
| TCCTCTTCTTGGCATACAAG+CGG | 0.552561 | 8.4:+66443737 | None:intergenic |
| CAACCAATGGCTTTAACTGA+AGG | 0.566317 | 8.4:+66443997 | None:intergenic |
| ATTGCAGGACTGACTTGTTG+AGG | 0.581903 | 8.4:+66444257 | None:intergenic |
| AATATATCACGAATCTCCTC+CGG | 0.585815 | 8.4:+66443930 | None:intergenic |
| AGTACTAGGCCGCTCAAACA+AGG | 0.587931 | 8.4:-66444198 | MS.gene056793:intron |
| ATTGAAGAACCTTGTTTGAG+CGG | 0.591670 | 8.4:+66444189 | None:intergenic |
| ACCGCTTGTATGCCAAGAAG+AGG | 0.592240 | 8.4:-66443738 | MS.gene056793:CDS |
| AATAATTGAAGGGAGATCAC+CGG | 0.593273 | 8.4:-66443949 | MS.gene056793:CDS |
| TCATCAGTTATGTTTCTCAA+GGG | 0.605396 | 8.4:+66443781 | None:intergenic |
| GAAACATAACTGATGATCCA+AGG | 0.605496 | 8.4:-66443774 | MS.gene056793:CDS |
| CTCTTGCTCGAATAATTGAA+GGG | 0.613445 | 8.4:-66443959 | MS.gene056793:CDS |
| GCCATGTCAGTTTCTGACAT+CGG | 0.624999 | 8.4:+66445335 | None:intergenic |
| GCCAGTTAGAATTTAATCTG+CGG | 0.626882 | 8.4:+66441120 | None:intergenic |
| TTTGCCTGATGATCTTACAG+AGG | 0.655792 | 8.4:-66443904 | MS.gene056793:intron |
| CATGGCAGTTATTAAACCCG+AGG | 0.683521 | 8.4:-66445318 | MS.gene056793:intron |
| TCCGATGTCAGAAACTGACA+TGG | 0.687992 | 8.4:-66445336 | None:intergenic |
| AGATGATGAAGCCTTATGTG+TGG | 0.697842 | 8.4:-66444403 | MS.gene056793:CDS |
| CGACTGGTGAGATCAACCAA+TGG | 0.697991 | 8.4:+66443984 | None:intergenic |
| AATTGAAGGGAGATCACCGG+AGG | 0.707838 | 8.4:-66443946 | MS.gene056793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCCAAAAAAATATAAT+CGG | + | chr8.4:66442614-66442633 | None:intergenic | 10.0% |
| !! | TAAGAAAATTATTTATAAAC+CGG | - | chr8.4:66444180-66444199 | MS.gene056793:intron | 10.0% |
| !! | TTAAACAAAATTTAACAATT+GGG | + | chr8.4:66441233-66441252 | None:intergenic | 10.0% |
| !!! | CAAAACTTTTTTATAATTTA+GGG | + | chr8.4:66443476-66443495 | None:intergenic | 10.0% |
| !!! | TAAGTTTAAAAGTATAAAAA+TGG | + | chr8.4:66441965-66441984 | None:intergenic | 10.0% |
| !!! | TCAAAACTTTTTTATAATTT+AGG | + | chr8.4:66443477-66443496 | None:intergenic | 10.0% |
| !! | AATATTTCTTGACATATAAA+TGG | + | chr8.4:66442144-66442163 | None:intergenic | 15.0% |
| !! | ATAAATAGTTAACTTTAATC+CGG | + | chr8.4:66444202-66444221 | None:intergenic | 15.0% |
| !! | CTTAAACAAAATTTAACAAT+TGG | + | chr8.4:66441234-66441253 | None:intergenic | 15.0% |
| !! | GATATTAAGAAAAGTTTATA+GGG | - | chr8.4:66445235-66445254 | MS.gene056793:intron | 15.0% |
| !! | TGATATTAAGAAAAGTTTAT+AGG | - | chr8.4:66445234-66445253 | MS.gene056793:intron | 15.0% |
| !!! | AAAATATTTGAGATTCTTTT+AGG | - | chr8.4:66444354-66444373 | MS.gene056793:CDS | 15.0% |
| !!! | AAACTTAATCCTTTTTTTTT+TGG | - | chr8.4:66445085-66445104 | MS.gene056793:intron | 15.0% |
| !!! | AAATATTTGAGATTCTTTTA+GGG | - | chr8.4:66444355-66444374 | MS.gene056793:CDS | 15.0% |
| !!! | AAGAAATTTGTATGATTTTT+GGG | - | chr8.4:66444302-66444321 | MS.gene056793:CDS | 15.0% |
| !!! | ACTGGAATAATTTTTATATA+AGG | - | chr8.4:66444025-66444044 | MS.gene056793:CDS | 15.0% |
| !!! | CAATTGTTAAATTTTGTTTA+AGG | - | chr8.4:66441232-66441251 | MS.gene056793:intron | 15.0% |
| !!! | GAAATTGAATTTTAGAAATT+AGG | - | chr8.4:66443155-66443174 | MS.gene056793:intron | 15.0% |
| !!! | TAAGAAATTTGTATGATTTT+TGG | - | chr8.4:66444301-66444320 | MS.gene056793:CDS | 15.0% |
| !! | AAATCACCTTAATCTATTTA+AGG | - | chr8.4:66441635-66441654 | MS.gene056793:intron | 20.0% |
| !! | AAATGTTTGTCTTATAGAAA+AGG | + | chr8.4:66443931-66443950 | None:intergenic | 20.0% |
| !! | AATGTTTGTCTTATAGAAAA+GGG | + | chr8.4:66443930-66443949 | None:intergenic | 20.0% |
| !! | AGAAAGTAAAATCTAAAAGA+GGG | - | chr8.4:66443178-66443197 | MS.gene056793:intron | 20.0% |
| !! | ATATAAAAATTATTCCAGTC+AGG | + | chr8.4:66444024-66444043 | None:intergenic | 20.0% |
| !! | ATATCTAATGTTTACATAGT+TGG | + | chr8.4:66441785-66441804 | None:intergenic | 20.0% |
| !! | CTTAAACATCCAAAAAAAAA+AGG | + | chr8.4:66445097-66445116 | None:intergenic | 20.0% |
| !! | GATGTACAAATAATTTCAAT+AGG | - | chr8.4:66441360-66441379 | MS.gene056793:intron | 20.0% |
| !! | TAATAAAACTGACACTATAT+TGG | - | chr8.4:66442021-66442040 | MS.gene056793:intron | 20.0% |
| !! | TATAAAAATTATTCCAGTCA+GGG | + | chr8.4:66444023-66444042 | None:intergenic | 20.0% |
| !! | TATTAAAAGCAAAAATTGAC+AGG | - | chr8.4:66444830-66444849 | MS.gene056793:intron | 20.0% |
| !! | TGTCAAGAAATATTACAAAA+AGG | - | chr8.4:66442150-66442169 | MS.gene056793:intron | 20.0% |
| !! | TGTTTATAAGTAAAAGACAA+AGG | + | chr8.4:66441288-66441307 | None:intergenic | 20.0% |
| !! | TTCCATTAATAAAAGACAAA+AGG | + | chr8.4:66443570-66443589 | None:intergenic | 20.0% |
| !! | TTGTTTCACGTAATATTTAA+TGG | - | chr8.4:66441329-66441348 | MS.gene056793:intron | 20.0% |
| !!! | AAAATCTGTGATTTTTGAAA+CGG | + | chr8.4:66441474-66441493 | None:intergenic | 20.0% |
| !!! | CATGTTGAATAGATATTTTA+AGG | - | chr8.4:66445024-66445043 | MS.gene056793:intron | 20.0% |
| !!! | CTTTTTTTTTTGGATGTTTA+AGG | - | chr8.4:66445095-66445114 | MS.gene056793:intron | 20.0% |
| !!! | TAATGTTCGTCTTTTAAAAA+GGG | + | chr8.4:66443736-66443755 | None:intergenic | 20.0% |
| !!! | TACAGTTAATTTTTTAGTGA+TGG | + | chr8.4:66444642-66444661 | None:intergenic | 20.0% |
| !!! | TCAATTTTTGCTTTTAATAC+CGG | + | chr8.4:66444829-66444848 | None:intergenic | 20.0% |
| !!! | TCTTTTATTAATGGAAATGA+TGG | - | chr8.4:66443574-66443593 | MS.gene056793:intron | 20.0% |
| !!! | TTTGTTTGTCACTATTTTTT+TGG | - | chr8.4:66444956-66444975 | MS.gene056793:intron | 20.0% |
| ! | AACTTAGATATAAAAAACCC+TGG | - | chr8.4:66443112-66443131 | MS.gene056793:intron | 25.0% |
| ! | AATTTGCCACAACAATTTAT+CGG | + | chr8.4:66444109-66444128 | None:intergenic | 25.0% |
| ! | ACCATACAACAATAAAAAGA+AGG | - | chr8.4:66443043-66443062 | MS.gene056793:intron | 25.0% |
| ! | ATCTAAGTTTCTGATATAGA+AGG | + | chr8.4:66443101-66443120 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTTATAGAAAAG+GGG | + | chr8.4:66443929-66443948 | None:intergenic | 25.0% |
| ! | CAAATGATGTGACAATATAA+GGG | + | chr8.4:66444278-66444297 | None:intergenic | 25.0% |
| ! | CTTATATTGTCACATCATTT+GGG | - | chr8.4:66444277-66444296 | MS.gene056793:CDS | 25.0% |
| ! | GAAATATTACAAAAAGGCAA+TGG | - | chr8.4:66442156-66442175 | MS.gene056793:intron | 25.0% |
| ! | GAGAAAGTAAAATCTAAAAG+AGG | - | chr8.4:66443177-66443196 | MS.gene056793:intron | 25.0% |
| ! | GATCTGTCAATTAAATAACA+CGG | - | chr8.4:66441711-66441730 | MS.gene056793:intron | 25.0% |
| ! | GATGTCATTGTAAAATTAAG+AGG | - | chr8.4:66443805-66443824 | MS.gene056793:intron | 25.0% |
| ! | GTAATATTTAATGGCATCAT+TGG | - | chr8.4:66441338-66441357 | MS.gene056793:intron | 25.0% |
| ! | TTATAAGAATGTGTGAGAAA+TGG | + | chr8.4:66442643-66442662 | None:intergenic | 25.0% |
| ! | TTATACACTGCTAAATCATT+TGG | - | chr8.4:66444579-66444598 | MS.gene056793:intron | 25.0% |
| ! | TTATTACCGATAAATTGTTG+TGG | - | chr8.4:66444100-66444119 | MS.gene056793:intron | 25.0% |
| ! | TTCACAATAAAAATCTTCCA+GGG | + | chr8.4:66443132-66443151 | None:intergenic | 25.0% |
| ! | TTCTATTTAATGTTACTCCT+TGG | - | chr8.4:66443700-66443719 | MS.gene056793:intron | 25.0% |
| ! | TTTATTAATGGAAATGATGG+AGG | - | chr8.4:66443577-66443596 | MS.gene056793:intron | 25.0% |
| ! | TTTCACAATAAAAATCTTCC+AGG | + | chr8.4:66443133-66443152 | None:intergenic | 25.0% |
| !! | AAATAGAAAGTGCACAAATT+AGG | + | chr8.4:66443688-66443707 | None:intergenic | 25.0% |
| !! | ACCTTCTTTTTATTGTTGTA+TGG | + | chr8.4:66443047-66443066 | None:intergenic | 25.0% |
| !! | ATTGGGATTCAATTTTGTAT+GGG | + | chr8.4:66441449-66441468 | None:intergenic | 25.0% |
| !! | GACCTTTTGTCTTTTATTAA+TGG | - | chr8.4:66443565-66443584 | MS.gene056793:intron | 25.0% |
| !! | GATACAAGTTTTTATTATCG+TGG | - | chr8.4:66444223-66444242 | MS.gene056793:CDS | 25.0% |
| !! | GATTTTCTTTTGTATAGGAA+CGG | - | chr8.4:66442373-66442392 | MS.gene056793:intron | 25.0% |
| !! | TCTGATCTAATTGATGTTTT+CGG | - | chr8.4:66443282-66443301 | MS.gene056793:intron | 25.0% |
| !! | TTTTATTACCTAAAATGACC+TGG | + | chr8.4:66445204-66445223 | None:intergenic | 25.0% |
| !!! | AAAATCACAGATTTTGAAAC+TGG | - | chr8.4:66441479-66441498 | MS.gene056793:intron | 25.0% |
| !!! | AAATCTGTGATTTTTGAAAC+GGG | + | chr8.4:66441473-66441492 | None:intergenic | 25.0% |
| !!! | ACTTCTCTTTGTTTTACTTT+TGG | - | chr8.4:66441998-66442017 | MS.gene056793:CDS | 25.0% |
| !!! | CTTTTAAAAAGGGTTTCTTA+TGG | + | chr8.4:66443726-66443745 | None:intergenic | 25.0% |
| !!! | GTAATGTTCGTCTTTTAAAA+AGG | + | chr8.4:66443737-66443756 | None:intergenic | 25.0% |
| !!! | GTATGCCGATTATATTTTTT+TGG | - | chr8.4:66442606-66442625 | MS.gene056793:intron | 25.0% |
| !!! | GTATGGTTTTTTTTGTTGTT+CGG | + | chr8.4:66443030-66443049 | None:intergenic | 25.0% |
| !!! | TACAATGACATCATTTTTAG+CGG | + | chr8.4:66443797-66443816 | None:intergenic | 25.0% |
| !!! | TTTGTTTAAGGTGTACTTTT+TGG | - | chr8.4:66441244-66441263 | MS.gene056793:intron | 25.0% |
| AAAAGCAAAAATTGACAGGT+GGG | - | chr8.4:66444834-66444853 | MS.gene056793:intron | 30.0% | |
| AAACAGCCATAAATGCATTA+TGG | + | chr8.4:66441402-66441421 | None:intergenic | 30.0% | |
| AAAGAAGGTGAGTGAATATA+AGG | - | chr8.4:66443058-66443077 | MS.gene056793:intron | 30.0% | |
| AAAGAGAAGTCTTCAATGAT+AGG | + | chr8.4:66441988-66442007 | None:intergenic | 30.0% | |
| AAATGACCTGGTAAAAAACA+TGG | + | chr8.4:66445192-66445211 | None:intergenic | 30.0% | |
| AAATTGTTGTGGCAAATTTG+TGG | - | chr8.4:66444111-66444130 | MS.gene056793:intron | 30.0% | |
| AACTAGAGCTTGAAATTTGA+AGG | + | chr8.4:66443338-66443357 | None:intergenic | 30.0% | |
| AAGACATACTGAACAATTCT+TGG | + | chr8.4:66442187-66442206 | None:intergenic | 30.0% | |
| AATTGTTGTGGCAAATTTGT+GGG | - | chr8.4:66444112-66444131 | MS.gene056793:intron | 30.0% | |
| ACAGAAGAATTCTTCTTTGA+AGG | - | chr8.4:66444508-66444527 | MS.gene056793:intron | 30.0% | |
| ACTAGAGCTTGAAATTTGAA+GGG | + | chr8.4:66443337-66443356 | None:intergenic | 30.0% | |
| ACTTTCTATCTGATGTTATG+AGG | - | chr8.4:66443755-66443774 | MS.gene056793:CDS | 30.0% | |
| AGAATAAAAAGAAGAACCGA+AGG | - | chr8.4:66444474-66444493 | MS.gene056793:intron | 30.0% | |
| AGATGATGATATAGATGATC+CGG | - | chr8.4:66444807-66444826 | MS.gene056793:intron | 30.0% | |
| ATATCACAGAATATCTCACT+CGG | - | chr8.4:66442349-66442368 | MS.gene056793:intron | 30.0% | |
| ATCATCAGTTATGTTTCTCA+AGG | + | chr8.4:66442687-66442706 | None:intergenic | 30.0% | |
| ATGCATTTATGGCTGTTTAA+TGG | - | chr8.4:66441404-66441423 | MS.gene056793:intron | 30.0% | |
| ATTTAAGGATGGTGATTCTA+GGG | - | chr8.4:66441650-66441669 | MS.gene056793:intron | 30.0% | |
| ATTTATCGGTAATAACCCTT+CGG | + | chr8.4:66444095-66444114 | None:intergenic | 30.0% | |
| CACCATCCTTAAATAGATTA+AGG | + | chr8.4:66441644-66441663 | None:intergenic | 30.0% | |
| CACCTTAATCTATTTAAGGA+TGG | - | chr8.4:66441639-66441658 | MS.gene056793:intron | 30.0% | |
| CATAAATGCATTATGGTTCA+CGG | + | chr8.4:66441395-66441414 | None:intergenic | 30.0% | |
| CCAAATGATGTGACAATATA+AGG | + | chr8.4:66444279-66444298 | None:intergenic | 30.0% | |
| CCTTATATTGTCACATCATT+TGG | - | chr8.4:66444276-66444295 | MS.gene056793:CDS | 30.0% | |
| CTTATGATGAGAAATTCGTT+AGG | - | chr8.4:66442400-66442419 | MS.gene056793:intron | 30.0% | |
| GATTGTAGACAAAATGAGAT+AGG | - | chr8.4:66443256-66443275 | MS.gene056793:intron | 30.0% | |
| TAAAAGCAAAAATTGACAGG+TGG | - | chr8.4:66444833-66444852 | MS.gene056793:intron | 30.0% | |
| TACAGAAAGATATCATACCT+CGG | + | chr8.4:66441166-66441185 | None:intergenic | 30.0% | |
| TAGCTTGACAATGTTCATTT+AGG | - | chr8.4:66442980-66442999 | MS.gene056793:intron | 30.0% | |
| TATTTAAGGATGGTGATTCT+AGG | - | chr8.4:66441649-66441668 | MS.gene056793:intron | 30.0% | |
| TCAAAGAAGAATTCTTCTGT+TGG | + | chr8.4:66444508-66444527 | None:intergenic | 30.0% | |
| TCATCAGTTATGTTTCTCAA+GGG | + | chr8.4:66442686-66442705 | None:intergenic | 30.0% | |
| TGAATGAACATAGAGTCTAT+TGG | - | chr8.4:66444616-66444635 | MS.gene056793:intron | 30.0% | |
| TGTGATATTTGTTCAGACTA+GGG | + | chr8.4:66442337-66442356 | None:intergenic | 30.0% | |
| TGTTTGTCTTATAGAAAAGG+GGG | + | chr8.4:66443928-66443947 | None:intergenic | 30.0% | |
| TTTAATTGACAGATCATGCA+TGG | + | chr8.4:66441706-66441725 | None:intergenic | 30.0% | |
| TTTACAACAACCTTCTTATG+TGG | + | chr8.4:66444545-66444564 | None:intergenic | 30.0% | |
| TTTCATGTTTCAGAATGTTG+AGG | - | chr8.4:66443507-66443526 | MS.gene056793:intron | 30.0% | |
| TTTCTCTATGACTGTTGTAA+TGG | - | chr8.4:66441907-66441926 | MS.gene056793:intron | 30.0% | |
| ! | GATTGGGATTCAATTTTGTA+TGG | + | chr8.4:66441450-66441469 | None:intergenic | 30.0% |
| ! | TCATTTAGGACATACTTTGT+TGG | - | chr8.4:66442994-66443013 | MS.gene056793:intron | 30.0% |
| ! | TCGGTGATTTTCTTTTGTAT+AGG | - | chr8.4:66442368-66442387 | MS.gene056793:intron | 30.0% |
| ! | TCGGTTCTTCTTTTTATTCT+TGG | + | chr8.4:66444474-66444493 | None:intergenic | 30.0% |
| ! | TCTCAATTTTATGACAGACT+AGG | - | chr8.4:66443867-66443886 | MS.gene056793:intron | 30.0% |
| ! | TTGGGATTCAATTTTGTATG+GGG | + | chr8.4:66441448-66441467 | None:intergenic | 30.0% |
| ! | TTTTTGTATTCTAGCCAGTT+AGG | - | chr8.4:66444907-66444926 | MS.gene056793:intron | 30.0% |
| !! | AACTTGTTGGATTGATTCAT+CGG | + | chr8.4:66442097-66442116 | None:intergenic | 30.0% |
| !! | CAACATTCTGAAACATGAAA+GGG | + | chr8.4:66443507-66443526 | None:intergenic | 30.0% |
| !! | GTTACTGTGTTTTGCTTTTA+AGG | - | chr8.4:66441596-66441615 | MS.gene056793:intron | 30.0% |
| !! | TCAACATTCTGAAACATGAA+AGG | + | chr8.4:66443508-66443527 | None:intergenic | 30.0% |
| !!! | AATCTGTGATTTTTGAAACG+GGG | + | chr8.4:66441472-66441491 | None:intergenic | 30.0% |
| !!! | ACAATGACATCATTTTTAGC+GGG | + | chr8.4:66443796-66443815 | None:intergenic | 30.0% |
| !!! | GTTTTTTACCAGGTCATTTT+AGG | - | chr8.4:66445193-66445212 | MS.gene056793:intron | 30.0% |
| AAGGACTAAAACATATGCAC+AGG | - | chr8.4:66445043-66445062 | MS.gene056793:intron | 35.0% | |
| AATAATTGAAGGGAGATCAC+CGG | - | chr8.4:66442515-66442534 | MS.gene056793:intron | 35.0% | |
| AATATATCACGAATCTCCTC+CGG | + | chr8.4:66442537-66442556 | None:intergenic | 35.0% | |
| ACAGAAAGATATCATACCTC+GGG | + | chr8.4:66441165-66441184 | None:intergenic | 35.0% | |
| AGAATTAAGCTCAACATTGC+AGG | + | chr8.4:66442225-66442244 | None:intergenic | 35.0% | |
| AGCACATCATTAACGAACTT+TGG | + | chr8.4:66444251-66444270 | None:intergenic | 35.0% | |
| AGCTGAAACTGTTAACATTG+CGG | - | chr8.4:66443222-66443241 | MS.gene056793:intron | 35.0% | |
| ATCATCTGTACCACATAAGA+AGG | - | chr8.4:66444532-66444551 | MS.gene056793:intron | 35.0% | |
| ATCTAAAAGAGGGCAACTAA+CGG | - | chr8.4:66443188-66443207 | MS.gene056793:intron | 35.0% | |
| CAATCTCTTGTTCAACTTGT+TGG | + | chr8.4:66442110-66442129 | None:intergenic | 35.0% | |
| CGTGAACCATAATGCATTTA+TGG | - | chr8.4:66441393-66441412 | MS.gene056793:intron | 35.0% | |
| CTAGAGCTTGAAATTTGAAG+GGG | + | chr8.4:66443336-66443355 | None:intergenic | 35.0% | |
| CTCACACATTCTTATAATCC+AGG | - | chr8.4:66442646-66442665 | MS.gene056793:intron | 35.0% | |
| CTCTTGCTCGAATAATTGAA+GGG | - | chr8.4:66442505-66442524 | MS.gene056793:intron | 35.0% | |
| CTGTGATATTTGTTCAGACT+AGG | + | chr8.4:66442338-66442357 | None:intergenic | 35.0% | |
| GAAACATAACTGATGATCCA+AGG | - | chr8.4:66442690-66442709 | MS.gene056793:intron | 35.0% | |
| GTATGTATGGTGTAAACTTG+AGG | + | chr8.4:66444746-66444765 | None:intergenic | 35.0% | |
| GTCTGTCATAAAATTGAGAC+TGG | + | chr8.4:66443866-66443885 | None:intergenic | 35.0% | |
| GTGAAGATCAATGTTGTCAA+TGG | - | chr8.4:66442880-66442899 | MS.gene056793:intron | 35.0% | |
| TAAAACATATGCACAGGACA+AGG | - | chr8.4:66445049-66445068 | MS.gene056793:intron | 35.0% | |
| TAACTGATGATCCAAGGATA+AGG | - | chr8.4:66442696-66442715 | MS.gene056793:intron | 35.0% | |
| TAGAGCTTGAAATTTGAAGG+GGG | + | chr8.4:66443335-66443354 | None:intergenic | 35.0% | |
| TCTTCAATGCTCTTATCTTG+TGG | - | chr8.4:66442290-66442309 | MS.gene056793:intron | 35.0% | |
| TGCAATCTGACACAAAACTA+AGG | + | chr8.4:66442930-66442949 | None:intergenic | 35.0% | |
| TTCTATCTGATGTTATGAGG+AGG | - | chr8.4:66443758-66443777 | MS.gene056793:CDS | 35.0% | |
| TTGATCTTCACATTTCGCAT+TGG | + | chr8.4:66442871-66442890 | None:intergenic | 35.0% | |
| TTGTCAAGCTATTGTTGTGT+TGG | + | chr8.4:66442971-66442990 | None:intergenic | 35.0% | |
| TTTAAGCTCTTTCCTCTTCT+TGG | + | chr8.4:66442741-66442760 | None:intergenic | 35.0% | |
| ! | AATTTTGTCACAGATCCGAA+GGG | - | chr8.4:66444437-66444456 | MS.gene056793:intron | 35.0% |
| ! | ATTGAAGAACCTTGTTTGAG+CGG | + | chr8.4:66442278-66442297 | None:intergenic | 35.0% |
| ! | TAATTGATGTTTTCGGCAAC+AGG | - | chr8.4:66443289-66443308 | MS.gene056793:intron | 35.0% |
| ! | TTCTTTTGTATAGGAACGGA+AGG | - | chr8.4:66442377-66442396 | MS.gene056793:intron | 35.0% |
| !! | ATTGTTGTGTTGGTTCAACA+TGG | + | chr8.4:66442961-66442980 | None:intergenic | 35.0% |
| !! | GTTTAAGGTGTACTTTTTGG+TGG | - | chr8.4:66441247-66441266 | MS.gene056793:intron | 35.0% |
| !! | TGTCGATTTCATCAAGTACT+AGG | - | chr8.4:66442252-66442271 | MS.gene056793:intron | 35.0% |
| !! | TTGGAAGTTTTAATCCCCTT+CGG | + | chr8.4:66444455-66444474 | None:intergenic | 35.0% |
| !!! | TACCTTCCATGTTTTTTACC+AGG | - | chr8.4:66445183-66445202 | MS.gene056793:intron | 35.0% |
| !!! | TAGTTTTGTGTCAGATTGCA+TGG | - | chr8.4:66442930-66442949 | MS.gene056793:CDS | 35.0% |
| !!! | TCTGTTGGTCTTTTTTCCTT+CGG | + | chr8.4:66444493-66444512 | None:intergenic | 35.0% |
| !!! | TGATTTTTGAAACGGGGATT+GGG | + | chr8.4:66441466-66441485 | None:intergenic | 35.0% |
| AAAAGGGTTTCTTATGGCCA+AGG | + | chr8.4:66443720-66443739 | None:intergenic | 40.0% | |
| AAAATTCTTCACCTCCAGTC+AGG | + | chr8.4:66444423-66444442 | None:intergenic | 40.0% | |
| AGTCAGGGATCGTAAAGTTA+GGG | + | chr8.4:66444008-66444027 | None:intergenic | 40.0% | |
| AGTGATTTGATTGAGCCCTA+AGG | + | chr8.4:66441822-66441841 | None:intergenic | 40.0% | |
| ATCTAGACCTATGTTGTCGA+TGG | + | chr8.4:66443430-66443449 | None:intergenic | 40.0% | |
| ATGCATTATGGTTCACGGAA+TGG | + | chr8.4:66441390-66441409 | None:intergenic | 40.0% | |
| CCATACATACGATGATCCTA+TGG | - | chr8.4:66444756-66444775 | MS.gene056793:intron | 40.0% | |
| CCATAGGATCATCGTATGTA+TGG | + | chr8.4:66444759-66444778 | None:intergenic | 40.0% | |
| CTTACATCTTGAACGAACTC+TGG | - | chr8.4:66444053-66444072 | MS.gene056793:CDS | 40.0% | |
| GAACGAACTCTGGATTATCA+GGG | - | chr8.4:66444063-66444082 | MS.gene056793:CDS | 40.0% | |
| GACCTGGTAAAAAACATGGA+AGG | + | chr8.4:66445188-66445207 | None:intergenic | 40.0% | |
| GCTCTTGCTCGAATAATTGA+AGG | - | chr8.4:66442504-66442523 | MS.gene056793:intron | 40.0% | |
| GCTGAAACTGTTAACATTGC+GGG | - | chr8.4:66443223-66443242 | MS.gene056793:intron | 40.0% | |
| GGTGCATCTTTGAATAGGAA+CGG | + | chr8.4:66443402-66443421 | None:intergenic | 40.0% | |
| TATAATCCAGGAAGAGAAGC+TGG | - | chr8.4:66442658-66442677 | MS.gene056793:intron | 40.0% | |
| TCATCATCGAACTCAACCAT+AGG | + | chr8.4:66444775-66444794 | None:intergenic | 40.0% | |
| TCCTATTCAAAGATGCACCA+CGG | - | chr8.4:66443403-66443422 | MS.gene056793:intron | 40.0% | |
| TGAAATTTGAAGGGGGAATC+AGG | + | chr8.4:66443328-66443347 | None:intergenic | 40.0% | |
| TGAACGAACTCTGGATTATC+AGG | - | chr8.4:66444062-66444081 | MS.gene056793:CDS | 40.0% | |
| TGTAAACTTGAGGTCTCACA+CGG | + | chr8.4:66444736-66444755 | None:intergenic | 40.0% | |
| TTCCTTCTCTAGGTGGTAAA+TGG | - | chr8.4:66444673-66444692 | MS.gene056793:intron | 40.0% | |
| TTTGCCTGATGATCTTACAG+AGG | - | chr8.4:66442560-66442579 | MS.gene056793:intron | 40.0% | |
| ! | AGATGATGAAGCCTTATGTG+TGG | - | chr8.4:66442061-66442080 | MS.gene056793:intron | 40.0% |
| ! | ATTTTGTCACAGATCCGAAG+GGG | - | chr8.4:66444438-66444457 | MS.gene056793:intron | 40.0% |
| ! | GAAGTTTGAAGCCACACATA+AGG | + | chr8.4:66442075-66442094 | None:intergenic | 40.0% |
| ! | GAATTTTGTCACAGATCCGA+AGG | - | chr8.4:66444436-66444455 | MS.gene056793:intron | 40.0% |
| ! | TAAAGAGCGTGAGAGGATAA+AGG | - | chr8.4:66442757-66442776 | MS.gene056793:intron | 40.0% |
| !! | CAACCAATGGCTTTAACTGA+AGG | + | chr8.4:66442470-66442489 | None:intergenic | 40.0% |
| !! | GTCTGTTACTTTGTGATGCA+GGG | - | chr8.4:66445305-66445324 | MS.gene056793:intron | 40.0% |
| !! | TGTCTGTTACTTTGTGATGC+AGG | - | chr8.4:66445304-66445323 | MS.gene056793:intron | 40.0% |
| !!! | ATGACATCATTTTTAGCGGG+CGG | + | chr8.4:66443793-66443812 | None:intergenic | 40.0% |
| !!! | GTGATTTTTGAAACGGGGAT+TGG | + | chr8.4:66441467-66441486 | None:intergenic | 40.0% |
| !!! | TTCCTTTTTGACTTCCTGAC+TGG | - | chr8.4:66444406-66444425 | MS.gene056793:intron | 40.0% |
| AAAAGAGGGCAACTAACGGT+AGG | - | chr8.4:66443192-66443211 | MS.gene056793:intron | 45.0% | |
| ACAGACGACAACTACCTAAC+TGG | + | chr8.4:66444924-66444943 | None:intergenic | 45.0% | |
| ACCACCTAGAGAAGGAAGAA+AGG | + | chr8.4:66444670-66444689 | None:intergenic | 45.0% | |
| ACCTAGAGAAGGAAGAAAGG+CGG | + | chr8.4:66444667-66444686 | None:intergenic | 45.0% | |
| AGAGACTACCAAGCAAACTC+AGG | + | chr8.4:66441866-66441885 | None:intergenic | 45.0% | |
| ATGCAAAGCCATCTTGCCTT+AGG | - | chr8.4:66441803-66441822 | MS.gene056793:intron | 45.0% | |
| ATTATCAGGGCCATTACCGA+AGG | - | chr8.4:66444076-66444095 | MS.gene056793:CDS | 45.0% | |
| CAGACTAGGCAAAATAGTGC+TGG | - | chr8.4:66443881-66443900 | MS.gene056793:intron | 45.0% | |
| CAGCCTTCAGTTAAAGCCAT+TGG | - | chr8.4:66442464-66442483 | MS.gene056793:intron | 45.0% | |
| CAGTCAGGGATCGTAAAGTT+AGG | + | chr8.4:66444009-66444028 | None:intergenic | 45.0% | |
| CATGGCAGTTATTAAACCCG+AGG | - | chr8.4:66441146-66441165 | MS.gene056793:intron | 45.0% | |
| CGGTAATAACCCTTCGGTAA+TGG | + | chr8.4:66444089-66444108 | None:intergenic | 45.0% | |
| CTAACTTTACGATCCCTGAC+TGG | - | chr8.4:66444007-66444026 | MS.gene056793:CDS | 45.0% | |
| CTCCAGTCAGGAAGTCAAAA+AGG | + | chr8.4:66444411-66444430 | None:intergenic | 45.0% | |
| GACACCTCTGTAAGATCATC+AGG | + | chr8.4:66442567-66442586 | None:intergenic | 45.0% | |
| GACCATTTACCACCTAGAGA+AGG | + | chr8.4:66444678-66444697 | None:intergenic | 45.0% | |
| GAGACTACCAAGCAAACTCA+GGG | + | chr8.4:66441865-66441884 | None:intergenic | 45.0% | |
| TACTTTGTGATGCAGGGAAG+TGG | - | chr8.4:66445311-66445330 | MS.gene056793:intron | 45.0% | |
| TCCGTGGTGCATCTTTGAAT+AGG | + | chr8.4:66443407-66443426 | None:intergenic | 45.0% | |
| TCCTCTTCTTGGCATACAAG+CGG | + | chr8.4:66442730-66442749 | None:intergenic | 45.0% | |
| TGCAAAGCCATCTTGCCTTA+GGG | - | chr8.4:66441804-66441823 | MS.gene056793:intron | 45.0% | |
| TGCTACTAGAGCTATAGCTC+AGG | + | chr8.4:66445145-66445164 | None:intergenic | 45.0% | |
| TTATCAGGGCCATTACCGAA+GGG | - | chr8.4:66444077-66444096 | MS.gene056793:CDS | 45.0% | |
| ! | AAGAGCTTAAAGAGCGTGAG+AGG | - | chr8.4:66442750-66442769 | MS.gene056793:intron | 45.0% |
| ! | CGGTTCAAAAGCCTTATCCT+TGG | + | chr8.4:66442710-66442729 | None:intergenic | 45.0% |
| ! | TAAGGATGGTGATTCTAGGG+AGG | - | chr8.4:66441653-66441672 | MS.gene056793:intron | 45.0% |
| ! | TTCGAATCCCTGAGTTTGCT+TGG | - | chr8.4:66441855-66441874 | MS.gene056793:intron | 45.0% |
| !! | ATTGCAGGACTGACTTGTTG+AGG | + | chr8.4:66442210-66442229 | None:intergenic | 45.0% |
| !! | GATGATCTTACAGAGGTGTC+TGG | - | chr8.4:66442567-66442586 | MS.gene056793:intron | 45.0% |
| !! | TAGGCAAAATAGTGCTGGCA+AGG | - | chr8.4:66443886-66443905 | MS.gene056793:intron | 45.0% |
| !!! | CTTTTTGACTTCCTGACTGG+AGG | - | chr8.4:66444409-66444428 | MS.gene056793:intron | 45.0% |
| AACTAAGGACGTTGCCACGT+TGG | + | chr8.4:66442915-66442934 | None:intergenic | 50.0% | |
| AATGGTGTATCGCACCAACG+TGG | - | chr8.4:66442898-66442917 | MS.gene056793:CDS | 50.0% | |
| AATTGAAGGGAGATCACCGG+AGG | - | chr8.4:66442518-66442537 | MS.gene056793:intron | 50.0% | |
| ACCGCCTTTCTTCCTTCTCT+AGG | - | chr8.4:66444663-66444682 | MS.gene056793:intron | 50.0% | |
| ACCGCTTGTATGCCAAGAAG+AGG | - | chr8.4:66442726-66442745 | MS.gene056793:intron | 50.0% | |
| AGTACTAGGCCGCTCAAACA+AGG | - | chr8.4:66442266-66442285 | MS.gene056793:intron | 50.0% | |
| CGACTGGTGAGATCAACCAA+TGG | + | chr8.4:66442483-66442502 | None:intergenic | 50.0% | |
| GATTGAGCCCTAAGGCAAGA+TGG | + | chr8.4:66441814-66441833 | None:intergenic | 50.0% | |
| GCCTTTCTTCCTTCTCTAGG+TGG | - | chr8.4:66444666-66444685 | MS.gene056793:intron | 50.0% | |
| GGCAACTAACGGTAGGTTCA+TGG | - | chr8.4:66443199-66443218 | MS.gene056793:intron | 50.0% | |
| GGTTGTGCACTTGTCTTGTC+TGG | - | chr8.4:66441928-66441947 | MS.gene056793:intron | 50.0% | |
| ! | TATTCGAGCAAGAGCACGAC+TGG | + | chr8.4:66442499-66442518 | None:intergenic | 50.0% |
| CCACGGACCATCGACAACAT+AGG | - | chr8.4:66443420-66443439 | MS.gene056793:intron | 55.0% | |
| CCTATGTTGTCGATGGTCCG+TGG | + | chr8.4:66443423-66443442 | None:intergenic | 55.0% | |
| ! | ACATGCTGCTGACTACGCAG+AGG | + | chr8.4:66445009-66445028 | None:intergenic | 55.0% |
| AGGGCTCCAGCTTCTCTTCC+TGG | + | chr8.4:66442667-66442686 | None:intergenic | 60.0% | |
| CGTGTGTGCACACGCGAGAA+GGG | + | chr8.4:66441752-66441771 | None:intergenic | 60.0% | |
| TCGTGTGTGCACACGCGAGA+AGG | + | chr8.4:66441753-66441772 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 66441132 | 66445354 | 66441132 | ID=MS.gene056793 |
| chr8.4 | mRNA | 66441132 | 66445354 | 66441132 | ID=MS.gene056793.t1;Parent=MS.gene056793 |
| chr8.4 | exon | 66445319 | 66445354 | 66445319 | ID=MS.gene056793.t1.exon1;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66445319 | 66445354 | 66445319 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66444199 | 66444423 | 66444199 | ID=MS.gene056793.t1.exon2;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66444199 | 66444423 | 66444199 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66443905 | 66444096 | 66443905 | ID=MS.gene056793.t1.exon3;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66443905 | 66444096 | 66443905 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66443708 | 66443818 | 66443708 | ID=MS.gene056793.t1.exon4;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66443708 | 66443818 | 66443708 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66442888 | 66442966 | 66442888 | ID=MS.gene056793.t1.exon5;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66442888 | 66442966 | 66442888 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66441933 | 66442036 | 66441933 | ID=MS.gene056793.t1.exon6;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66441933 | 66442036 | 66441933 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66441272 | 66441281 | 66441272 | ID=MS.gene056793.t1.exon7;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66441272 | 66441281 | 66441272 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| chr8.4 | exon | 66441132 | 66441160 | 66441132 | ID=MS.gene056793.t1.exon8;Parent=MS.gene056793.t1 |
| chr8.4 | CDS | 66441132 | 66441160 | 66441132 | ID=cds.MS.gene056793.t1;Parent=MS.gene056793.t1 |
| Gene Sequence |
| Protein sequence |
