Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056994.t1 | XP_003597559.1 | 99.2 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.00E+00 | 1756.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056994.t1 | P09918 | 92.3 | 861 | 66 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1650.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056994.t1 | G7IS30 | 99.2 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1756.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051967 | MS.gene056994 | 0.994954 | 1.11E-211 | -1.69E-46 |
MS.gene056994 | MS.gene059667 | 0.811195 | 7.90E-51 | -1.69E-46 |
MS.gene056994 | MS.gene85239 | 0.916334 | 2.02E-85 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056994.t1 | MTR_2g099570 | 99.187 | 861 | 7 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1770 |
MS.gene056994.t1 | MTR_2g099560 | 75.173 | 866 | 207 | 3 | 1 | 861 | 1 | 863 | 0.0 | 1369 |
MS.gene056994.t1 | MTR_8g018420 | 75.501 | 849 | 206 | 2 | 14 | 861 | 9 | 856 | 0.0 | 1353 |
MS.gene056994.t1 | MTR_8g018730 | 71.065 | 864 | 239 | 3 | 7 | 861 | 3 | 864 | 0.0 | 1284 |
MS.gene056994.t1 | MTR_8g018550 | 71.346 | 869 | 240 | 3 | 1 | 861 | 1 | 868 | 0.0 | 1283 |
MS.gene056994.t1 | MTR_8g018735 | 71.445 | 865 | 235 | 5 | 7 | 861 | 3 | 865 | 0.0 | 1276 |
MS.gene056994.t1 | MTR_8g020990 | 69.965 | 869 | 252 | 3 | 1 | 861 | 1 | 868 | 0.0 | 1274 |
MS.gene056994.t1 | MTR_5g024020 | 70.473 | 867 | 242 | 5 | 7 | 861 | 3 | 867 | 0.0 | 1269 |
MS.gene056994.t1 | MTR_8g018570 | 70.149 | 871 | 249 | 6 | 1 | 861 | 1 | 870 | 0.0 | 1269 |
MS.gene056994.t1 | MTR_8g018690 | 70.034 | 871 | 245 | 3 | 1 | 861 | 1 | 865 | 0.0 | 1266 |
MS.gene056994.t1 | MTR_8g018430 | 69.222 | 861 | 258 | 4 | 6 | 861 | 3 | 861 | 0.0 | 1257 |
MS.gene056994.t1 | MTR_8g018520 | 69.505 | 869 | 256 | 4 | 1 | 861 | 1 | 868 | 0.0 | 1245 |
MS.gene056994.t1 | MTR_8g018510 | 67.995 | 878 | 255 | 6 | 1 | 861 | 1 | 869 | 0.0 | 1234 |
MS.gene056994.t1 | MTR_8g018690 | 68.197 | 871 | 241 | 4 | 1 | 861 | 1 | 845 | 0.0 | 1220 |
MS.gene056994.t1 | MTR_8g018730 | 68.403 | 864 | 232 | 4 | 7 | 861 | 3 | 834 | 0.0 | 1217 |
MS.gene056994.t1 | MTR_5g024020 | 67.589 | 867 | 231 | 6 | 7 | 861 | 3 | 831 | 0.0 | 1204 |
MS.gene056994.t1 | MTR_3g081130 | 65.349 | 860 | 287 | 6 | 8 | 861 | 4 | 858 | 0.0 | 1171 |
MS.gene056994.t1 | MTR_1g083020 | 62.457 | 871 | 300 | 8 | 1 | 861 | 5 | 858 | 0.0 | 1117 |
MS.gene056994.t1 | MTR_8g018450 | 63.152 | 863 | 268 | 9 | 9 | 861 | 6 | 828 | 0.0 | 1107 |
MS.gene056994.t1 | MTR_3g081130 | 66.540 | 789 | 258 | 4 | 75 | 861 | 2 | 786 | 0.0 | 1106 |
MS.gene056994.t1 | MTR_7g113410 | 59.456 | 883 | 320 | 11 | 1 | 861 | 1 | 867 | 0.0 | 1065 |
MS.gene056994.t1 | MTR_1g104650 | 56.552 | 870 | 345 | 10 | 9 | 861 | 3 | 856 | 0.0 | 1012 |
MS.gene056994.t1 | MTR_8g018650 | 58.178 | 856 | 303 | 8 | 9 | 861 | 4 | 807 | 0.0 | 998 |
MS.gene056994.t1 | MTR_8g018620 | 57.643 | 857 | 306 | 10 | 9 | 861 | 4 | 807 | 0.0 | 989 |
MS.gene056994.t1 | MTR_8g018590 | 58.293 | 820 | 295 | 11 | 58 | 861 | 35 | 823 | 0.0 | 942 |
MS.gene056994.t1 | MTR_8g018730 | 73.630 | 584 | 153 | 1 | 278 | 861 | 2 | 584 | 0.0 | 910 |
MS.gene056994.t1 | MTR_8g018735 | 70.732 | 615 | 168 | 5 | 7 | 611 | 3 | 615 | 0.0 | 884 |
MS.gene056994.t1 | MTR_8g020970 | 46.036 | 845 | 434 | 14 | 29 | 860 | 91 | 926 | 0.0 | 736 |
MS.gene056994.t1 | MTR_8g080230 | 44.811 | 819 | 427 | 14 | 57 | 861 | 109 | 916 | 0.0 | 690 |
MS.gene056994.t1 | MTR_3g479460 | 42.361 | 864 | 451 | 15 | 11 | 861 | 74 | 903 | 0.0 | 680 |
MS.gene056994.t1 | MTR_4g066170 | 42.281 | 868 | 472 | 17 | 10 | 861 | 52 | 906 | 0.0 | 672 |
MS.gene056994.t1 | MTR_3g079450 | 41.744 | 860 | 466 | 15 | 19 | 861 | 61 | 902 | 0.0 | 667 |
MS.gene056994.t1 | MTR_8g011340 | 42.590 | 803 | 420 | 15 | 50 | 827 | 47 | 833 | 0.0 | 640 |
MS.gene056994.t1 | MTR_4g088810 | 41.383 | 824 | 436 | 14 | 53 | 860 | 102 | 894 | 0.0 | 627 |
MS.gene056994.t1 | MTR_3g079420 | 43.693 | 769 | 411 | 11 | 106 | 861 | 106 | 865 | 0.0 | 615 |
MS.gene056994.t1 | MTR_8g021020 | 70.633 | 395 | 115 | 1 | 468 | 861 | 37 | 431 | 0.0 | 583 |
MS.gene056994.t1 | MTR_8g020970 | 44.706 | 595 | 308 | 13 | 29 | 611 | 91 | 676 | 3.61e-157 | 475 |
MS.gene056994.t1 | MTR_6g452500 | 39.706 | 612 | 334 | 12 | 250 | 844 | 12 | 605 | 1.32e-149 | 454 |
MS.gene056994.t1 | MTR_3g079450 | 40.954 | 608 | 326 | 14 | 19 | 611 | 61 | 650 | 4.21e-141 | 433 |
MS.gene056994.t1 | MTR_7g012030 | 59.829 | 117 | 46 | 1 | 516 | 631 | 87 | 203 | 1.48e-40 | 149 |
MS.gene056994.t1 | MTR_6g046330 | 53.906 | 128 | 47 | 2 | 516 | 631 | 77 | 204 | 7.08e-35 | 135 |
MS.gene056994.t1 | MTR_3g107560 | 38.767 | 227 | 76 | 7 | 639 | 861 | 7 | 174 | 2.64e-34 | 129 |
MS.gene056994.t1 | MTR_8g463810 | 33.468 | 248 | 93 | 7 | 401 | 647 | 181 | 357 | 2.71e-31 | 127 |
MS.gene056994.t1 | MTR_2g005920 | 58.333 | 60 | 24 | 1 | 735 | 794 | 58 | 116 | 1.90e-17 | 79.7 |
MS.gene056994.t1 | MTR_7g113408 | 54.839 | 62 | 28 | 0 | 754 | 815 | 8 | 69 | 3.61e-17 | 77.8 |
MS.gene056994.t1 | MTR_4g088805 | 42.857 | 91 | 51 | 1 | 771 | 860 | 1 | 91 | 9.73e-16 | 73.6 |
MS.gene056994.t1 | MTR_5g023990 | 42.647 | 68 | 26 | 1 | 647 | 714 | 145 | 199 | 7.92e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056994.t1 | AT1G55020 | 60.182 | 879 | 312 | 10 | 1 | 861 | 1 | 859 | 0.0 | 1079 |
MS.gene056994.t1 | AT3G22400 | 57.077 | 869 | 336 | 10 | 14 | 861 | 34 | 886 | 0.0 | 1019 |
MS.gene056994.t1 | AT1G72520 | 45.255 | 822 | 431 | 11 | 50 | 861 | 114 | 926 | 0.0 | 721 |
MS.gene056994.t1 | AT1G17420 | 44.289 | 858 | 445 | 13 | 14 | 861 | 85 | 919 | 0.0 | 712 |
MS.gene056994.t1 | AT3G45140 | 43.705 | 826 | 427 | 19 | 50 | 861 | 95 | 896 | 0.0 | 662 |
MS.gene056994.t1 | AT1G67560 | 44.161 | 822 | 427 | 14 | 57 | 861 | 111 | 917 | 0.0 | 658 |
MS.gene056994.t1 | AT3G45140 | 45.229 | 765 | 393 | 15 | 110 | 861 | 3 | 754 | 0.0 | 650 |
Find 199 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTATTTCCAAACTTCTTAA+AGG | 0.131647 | 2.1:-5040957 | None:intergenic |
CTTCATGCAGCTGTTAATTT+TGG | 0.135058 | 2.1:+5040680 | MS.gene056994:CDS |
GCTTGGAAAGGCTACCTTTC+TGG | 0.147026 | 2.1:+5037884 | MS.gene056994:CDS |
GTCTTGGACCCATGTCTTTA+TGG | 0.177320 | 2.1:-5040474 | None:intergenic |
GAAGTTTAACCTTTCCTATT+TGG | 0.185897 | 2.1:-5038553 | None:intergenic |
TATGATGTCTACAATGATTT+AGG | 0.198014 | 2.1:+5038439 | MS.gene056994:CDS |
ACTCAATAATGCCATATTTA+AGG | 0.200843 | 2.1:+5039626 | MS.gene056994:CDS |
AGGATACAAAAGTTTATAAA+TGG | 0.201433 | 2.1:-5040043 | None:intergenic |
TCGATAAGTGTCTGAAATTT+TGG | 0.216610 | 2.1:-5040833 | None:intergenic |
CTCATGATGGATTAGATATA+TGG | 0.224741 | 2.1:+5040447 | MS.gene056994:CDS |
CTTCTAAAGTTTACAAGAAT+TGG | 0.234179 | 2.1:+5040175 | MS.gene056994:CDS |
TCTTCACGAGCTTGCATCTT+AGG | 0.236547 | 2.1:-5040614 | None:intergenic |
GATAATCTTACTGCTTTCTT+AGG | 0.245074 | 2.1:+5032795 | MS.gene056994:CDS |
ACCAGTGTTGGTGGAGTTAT+TGG | 0.257398 | 2.1:+5032741 | MS.gene056994:CDS |
GAAATACCTTGAAGTACTTT+AGG | 0.278008 | 2.1:-5039001 | None:intergenic |
TTAGAGGCCTTTAAGAAGTT+TGG | 0.281957 | 2.1:+5040950 | MS.gene056994:CDS |
ACTGTGAGCCCTTCTAAATT+AGG | 0.288323 | 2.1:-5039448 | None:intergenic |
GAGTTTATTCGCCTTAAATA+TGG | 0.300979 | 2.1:-5039637 | None:intergenic |
TCTTCTCTGTAATGGACTAA+TGG | 0.308219 | 2.1:-5038352 | None:intergenic |
CTTCCAAGAGATGAAGCTTT+TGG | 0.309488 | 2.1:+5038728 | MS.gene056994:CDS |
AATAGGGGTCATAAGATAAA+AGG | 0.310068 | 2.1:+5032672 | MS.gene056994:CDS |
AAGTAGATGCTTCCATGATT+TGG | 0.311647 | 2.1:-5038065 | None:intergenic |
ATTAGGTTCTAGGTGTTCTT+TGG | 0.320520 | 2.1:-5039431 | None:intergenic |
GCCCTTCTAAATTAGGTTCT+AGG | 0.324988 | 2.1:-5039441 | None:intergenic |
CCAATTCTTCTTCTCTGTAA+TGG | 0.332097 | 2.1:-5038360 | None:intergenic |
CTTCAGATAGAGATACTATT+AGG | 0.343809 | 2.1:-5041112 | None:intergenic |
GATAGCTTTGATGAAGTTCA+TGG | 0.345965 | 2.1:+5038863 | MS.gene056994:CDS |
CACCTAGAACCTAATTTAGA+AGG | 0.346924 | 2.1:+5039439 | MS.gene056994:CDS |
GAAGGATGAAGCAAAGTATA+AGG | 0.351751 | 2.1:-5041058 | None:intergenic |
TGCCTGCTGATCTTATAAAA+AGG | 0.357335 | 2.1:+5040217 | MS.gene056994:CDS |
GGTCAAGGTTTCGACATTCT+TGG | 0.358750 | 2.1:+5032762 | MS.gene056994:CDS |
AATCATGCTCGTCCTGTTCT+TGG | 0.365294 | 2.1:+5038481 | MS.gene056994:CDS |
ATCAGATACAAGGGCATTAG+AGG | 0.370748 | 2.1:+5040934 | MS.gene056994:CDS |
TATTCAGCTGACCCTTTCTC+TGG | 0.371851 | 2.1:-5040761 | None:intergenic |
CTTGTATCTGATGTCCAGTT+TGG | 0.373343 | 2.1:-5040923 | None:intergenic |
TGAAGACAGCAGATCACATT+TGG | 0.374523 | 2.1:-5039201 | None:intergenic |
GAAGAATTGGATAATTTAAG+AGG | 0.378647 | 2.1:+5038373 | MS.gene056994:CDS |
TGACCAAAAGCTTCATCTCT+TGG | 0.391538 | 2.1:-5038731 | None:intergenic |
GCGGTCAAGTTTGTGGTGTT+TGG | 0.393878 | 2.1:-5038114 | None:intergenic |
GAACTGGCAGAAAGCCAAAT+AGG | 0.394315 | 2.1:+5038539 | MS.gene056994:CDS |
GTTGATGAGAAAGAACGTTT+TGG | 0.396705 | 2.1:+5032704 | MS.gene056994:CDS |
GGATACAAAAGTTTATAAAT+GGG | 0.397641 | 2.1:-5040042 | None:intergenic |
TCAAAGCTATCAAACTCATT+TGG | 0.400263 | 2.1:-5038851 | None:intergenic |
TGACAGTACTATCTGGTTAC+TGG | 0.400978 | 2.1:+5039813 | MS.gene056994:CDS |
CGTGTATATATATACCTTGT+TGG | 0.402484 | 2.1:-5038147 | None:intergenic |
GATGATGACATGGGAATTCC+TGG | 0.404317 | 2.1:+5037975 | MS.gene056994:CDS |
CCATTACAGAGAAGAAGAAT+TGG | 0.410502 | 2.1:+5038360 | MS.gene056994:CDS |
AAGTTTGCACTACTGTCATA+TGG | 0.411943 | 2.1:+5040645 | MS.gene056994:CDS |
GTGTGGCAAACTCAACTCTA+TGG | 0.415566 | 2.1:-5039731 | None:intergenic |
GTTTATCAACCCGCGCTAGA+AGG | 0.415970 | 2.1:+5039787 | MS.gene056994:CDS |
TCTAATCCATCATGAGCATA+AGG | 0.416079 | 2.1:-5040440 | None:intergenic |
CAAGTTCTTTCCACCAAGCT+TGG | 0.416248 | 2.1:-5040550 | None:intergenic |
AAATGTGATCTGCTGTCTTC+AGG | 0.419247 | 2.1:+5039203 | MS.gene056994:CDS |
ATTTCTTTGAGCACAGGTAA+TGG | 0.423088 | 2.1:-5038938 | None:intergenic |
GTAAGTCCTTCCTCACTAGA+AGG | 0.433641 | 2.1:-5041076 | None:intergenic |
TTTGCAAGAGAAATGCTTGC+TGG | 0.439835 | 2.1:+5039171 | MS.gene056994:CDS |
AAGCTAGATAGTCAAGTCTA+TGG | 0.439854 | 2.1:+5039388 | MS.gene056994:CDS |
CCACCACCTAAAGTACTTCA+AGG | 0.442382 | 2.1:+5038995 | MS.gene056994:CDS |
TACAAGAATTGGACTTTGCC+AGG | 0.442800 | 2.1:+5040186 | MS.gene056994:CDS |
CTACAATGATTTAGGAAATC+CGG | 0.445050 | 2.1:+5038447 | MS.gene056994:CDS |
CTTGAAGACATTCCAAATCA+TGG | 0.449276 | 2.1:+5038053 | MS.gene056994:CDS |
GGGTGACGGGGATATTGAAT+AGG | 0.449380 | 2.1:+5032655 | MS.gene056994:CDS |
TAAACTGTTATTTAGAGGAA+TGG | 0.452635 | 2.1:+5040364 | MS.gene056994:intron |
GGTGACGGGGATATTGAATA+GGG | 0.454200 | 2.1:+5032656 | MS.gene056994:CDS |
AATTTAAGAGGAGATGGAAC+AGG | 0.457209 | 2.1:+5038385 | MS.gene056994:CDS |
TTGGATAATTTAAGAGGAGA+TGG | 0.457945 | 2.1:+5038379 | MS.gene056994:CDS |
ATTACCTCGTTACCAACATT+GGG | 0.468046 | 2.1:+5037915 | MS.gene056994:CDS |
CGAAAGATTTCTTTGAGCAC+AGG | 0.468335 | 2.1:-5038944 | None:intergenic |
TTCTCTTGCTCGACAATCCC+TGG | 0.469936 | 2.1:+5040092 | MS.gene056994:CDS |
AAAGTATAAGGCATCTGAAC+CGG | 0.470881 | 2.1:-5041046 | None:intergenic |
CATGCTCGTCCTGTTCTTGG+AGG | 0.471870 | 2.1:+5038484 | MS.gene056994:CDS |
AGGAGATTCATGCCAGAGAA+AGG | 0.472743 | 2.1:+5040749 | MS.gene056994:CDS |
GCACCATGTTCATCTCCGTC+AGG | 0.473569 | 2.1:-5039754 | None:intergenic |
TCTACTTTGTATGCAACTCC+TGG | 0.474359 | 2.1:+5038081 | MS.gene056994:CDS |
AATTACCTCGTTACCAACAT+TGG | 0.475554 | 2.1:+5037914 | MS.gene056994:CDS |
TCATCAGACCCTCCAAGAAC+AGG | 0.477028 | 2.1:-5038493 | None:intergenic |
GAGAGAGAGACAATCCAAAC+TGG | 0.477917 | 2.1:+5040909 | MS.gene056994:CDS |
TGGTGTTAAGCTTGTGGTAG+AGG | 0.478787 | 2.1:+5040412 | MS.gene056994:CDS |
TGATACCTCCATCGTTGACC+AGG | 0.480839 | 2.1:-5040110 | None:intergenic |
CTGTTAGTTGCTATGACAAA+TGG | 0.485866 | 2.1:-5040000 | None:intergenic |
CCTTGATAATATCTCTATAA+CGG | 0.488021 | 2.1:-5040861 | None:intergenic |
TGAAGTTCATGGATTGTATG+AGG | 0.488443 | 2.1:+5038874 | MS.gene056994:CDS |
AGAAAATGCGGTCAAGTTTG+TGG | 0.492571 | 2.1:-5038121 | None:intergenic |
CTTCATCCTTCTAGTGAGGA+AGG | 0.493335 | 2.1:+5041070 | MS.gene056994:CDS |
AAGATTACAGACTCTAATGC+TGG | 0.496355 | 2.1:-5038812 | None:intergenic |
GCAAATGGAAAAGGGAAGCT+TGG | 0.496407 | 2.1:+5037867 | MS.gene056994:intron |
ATTTAGAGGAATGGCAATTG+AGG | 0.498020 | 2.1:+5040373 | MS.gene056994:intron |
TAAACCGTCCAACTCTTAGT+AGG | 0.498943 | 2.1:+5040729 | MS.gene056994:CDS |
GATTACCCTTATGCTCATGA+TGG | 0.501130 | 2.1:+5040434 | MS.gene056994:CDS |
GCTTCTGATGAAGTTTACCT+TGG | 0.505122 | 2.1:+5040887 | MS.gene056994:CDS |
TACTATCTGGTTACTGGCTA+AGG | 0.505546 | 2.1:+5039819 | MS.gene056994:CDS |
TGAATATCCTTATCCTCGTA+GGG | 0.505776 | 2.1:+5038513 | MS.gene056994:CDS |
TTATTAATTGAACAGTAAGT+AGG | 0.507897 | 2.1:+5039124 | MS.gene056994:intron |
ACCAATAACTCCACCAACAC+TGG | 0.508894 | 2.1:-5032742 | None:intergenic |
GTTGGTGGAGTTATTGGTCA+AGG | 0.511646 | 2.1:+5032747 | MS.gene056994:CDS |
CGAGTAGCATAAGCCTTCGT+TGG | 0.513089 | 2.1:-5039664 | None:intergenic |
CAAACTGGACATCAGATACA+AGG | 0.515129 | 2.1:+5040924 | MS.gene056994:CDS |
CCTTGAAGTACTTTAGGTGG+TGG | 0.515750 | 2.1:-5038995 | None:intergenic |
ATCATCAACTTGTCAGCCAT+TGG | 0.519374 | 2.1:+5039869 | MS.gene056994:CDS |
ATAAATAGTTTAACCAGTGT+TGG | 0.520445 | 2.1:+5032729 | MS.gene056994:CDS |
TGACTATCTAGCTTGCTTCG+CGG | 0.521367 | 2.1:-5039379 | None:intergenic |
AATAGTTTAACCAGTGTTGG+TGG | 0.524770 | 2.1:+5032732 | MS.gene056994:CDS |
TCATGATGGATTAGATATAT+GGG | 0.524917 | 2.1:+5040448 | MS.gene056994:CDS |
GCTAGTCAAAAGTCCACAAA+AGG | 0.525330 | 2.1:+5040790 | MS.gene056994:CDS |
GTGTTTGGCATTATAAATCC+AGG | 0.526188 | 2.1:-5038099 | None:intergenic |
GCTGACAAGTTGATGATAGC+AGG | 0.527862 | 2.1:-5039863 | None:intergenic |
CCGTTATAGAGATATTATCA+AGG | 0.528835 | 2.1:+5040861 | MS.gene056994:CDS |
ATTCTGAACTCCAAGCTTGG+TGG | 0.533029 | 2.1:+5040540 | MS.gene056994:CDS |
AAGGTGTTGACAGTACTATC+TGG | 0.533260 | 2.1:+5039806 | MS.gene056994:CDS |
GGAGATTCATGCCAGAGAAA+GGG | 0.533470 | 2.1:+5040750 | MS.gene056994:CDS |
CTAATCCATCATGAGCATAA+GGG | 0.533765 | 2.1:-5040439 | None:intergenic |
ATGAATATCCTTATCCTCGT+AGG | 0.539701 | 2.1:+5038512 | MS.gene056994:CDS |
TGGAAAGAACTTGTAGAGGT+TGG | 0.540154 | 2.1:+5040560 | MS.gene056994:CDS |
TTGAGTCATGATGATCTAGC+AGG | 0.544752 | 2.1:-5039609 | None:intergenic |
TTCTTGATGTAAAATGCTCC+AGG | 0.545064 | 2.1:-5037993 | None:intergenic |
TTAACACCACATGGGGAAGA+TGG | 0.545155 | 2.1:-5040398 | None:intergenic |
GGTAATTATACCTTCCAGAA+AGG | 0.548726 | 2.1:-5037898 | None:intergenic |
TGTTCATCTCCGTCAGGGTG+TGG | 0.548827 | 2.1:-5039748 | None:intergenic |
AAGATTCTGAACTCCAAGCT+TGG | 0.549849 | 2.1:+5040537 | MS.gene056994:CDS |
TTTGGACAGTATTCCTATGG+TGG | 0.549856 | 2.1:+5040698 | MS.gene056994:CDS |
GTCACTGCTCAAGAAAAGGA+TGG | 0.551825 | 2.1:-5039689 | None:intergenic |
GATTTAGGAAATCCGGAGAA+AGG | 0.552556 | 2.1:+5038454 | MS.gene056994:CDS |
GTTTAATATTAAACCACCAT+AGG | 0.555608 | 2.1:-5040711 | None:intergenic |
TGACAAAACTTTGAAGCCAC+TGG | 0.555755 | 2.1:+5039708 | MS.gene056994:CDS |
AACTTTAGAAGACATTTCCA+TGG | 0.557234 | 2.1:-5040163 | None:intergenic |
CCCATGTGGTGTTAAGCTTG+TGG | 0.560091 | 2.1:+5040406 | MS.gene056994:CDS |
ACCACAAGCTTAACACCACA+TGG | 0.560657 | 2.1:-5040407 | None:intergenic |
AATAAACTCGACTCCAACGA+AGG | 0.561264 | 2.1:+5039651 | MS.gene056994:CDS |
AAAGAAATCTTTCGAACCGA+TGG | 0.561372 | 2.1:+5038953 | MS.gene056994:CDS |
ATCTTGCTAAGTACATCTGT+TGG | 0.562012 | 2.1:-5038911 | None:intergenic |
GTCATCTGTGGTGTAGTACA+AGG | 0.566258 | 2.1:-5040504 | None:intergenic |
CTGTAATGGACTAATGGAGC+CGG | 0.568264 | 2.1:-5038346 | None:intergenic |
AATGGAGCCGGTGTTTCACT+AGG | 0.568995 | 2.1:-5038334 | None:intergenic |
AGAAGGGCTCACAGTAGAAG+AGG | 0.571068 | 2.1:+5039456 | MS.gene056994:CDS |
TTTGTGGGGAAGATATTCCA+TGG | 0.571326 | 2.1:+5040146 | MS.gene056994:CDS |
GCTAAGACACCGTCTTGGAC+CGG | 0.576095 | 2.1:+5041027 | MS.gene056994:CDS |
GAGAAGCTAAGACACCGTCT+TGG | 0.580287 | 2.1:+5041022 | MS.gene056994:CDS |
TCGTTACCAACATTGGGAGC+AGG | 0.580669 | 2.1:+5037921 | MS.gene056994:CDS |
ATGCTCGTCCTGTTCTTGGA+GGG | 0.582766 | 2.1:+5038485 | MS.gene056994:CDS |
TTGGATTGTCTCTCTCTCCA+AGG | 0.586410 | 2.1:-5040904 | None:intergenic |
ACCTAGAACCTAATTTAGAA+GGG | 0.587489 | 2.1:+5039440 | MS.gene056994:CDS |
ATGAATCTCCTACTAAGAGT+TGG | 0.587805 | 2.1:-5040737 | None:intergenic |
GAGAACGCAAAGAGTGGGAA+AGG | 0.590166 | 2.1:+5038407 | MS.gene056994:CDS |
CTTTAGGTGGTGGATACTTG+AGG | 0.590324 | 2.1:-5038985 | None:intergenic |
ATAATATCTCTATAACGGAA+AGG | 0.590956 | 2.1:-5040856 | None:intergenic |
CTGTCAACACCTTCTAGCGC+GGG | 0.591310 | 2.1:-5039796 | None:intergenic |
GATTGTCCTGCTCCCAATGT+TGG | 0.594856 | 2.1:-5037927 | None:intergenic |
TCAGCAGGCAATGCTTGACC+TGG | 0.597933 | 2.1:-5040204 | None:intergenic |
GAACAGTAAGTAGGTCTGCA+TGG | 0.598243 | 2.1:+5039133 | MS.gene056994:intron |
CTATCTAGCTTGCTTCGCGG+AGG | 0.598943 | 2.1:-5039376 | None:intergenic |
GAACAGGAGAACGCAAAGAG+TGG | 0.600744 | 2.1:+5038401 | MS.gene056994:CDS |
TATCTAGCTTGCTTCGCGGA+GGG | 0.601690 | 2.1:-5039375 | None:intergenic |
CTTCAAGAGTCAAACTCACA+AGG | 0.601849 | 2.1:-5038037 | None:intergenic |
CAGATCCTAAAAGTGAGAGT+AGG | 0.603906 | 2.1:+5038690 | MS.gene056994:intron |
GAAGTTCATGGATTGTATGA+GGG | 0.604985 | 2.1:+5038875 | MS.gene056994:CDS |
CGACAATCCCTGGTCAACGA+TGG | 0.605478 | 2.1:+5040102 | MS.gene056994:CDS |
CTTGAGGAACTGTTCACCAT+CGG | 0.606084 | 2.1:-5038969 | None:intergenic |
GAAAGCAGTATCTCAAAATG+TGG | 0.606848 | 2.1:+5038787 | MS.gene056994:CDS |
ATACCTTGAAGTACTTTAGG+TGG | 0.608053 | 2.1:-5038998 | None:intergenic |
GTTCATGGATTGTATGAGGG+TGG | 0.608173 | 2.1:+5038878 | MS.gene056994:CDS |
CACCCTGACGGAGATGAACA+TGG | 0.612917 | 2.1:+5039751 | MS.gene056994:CDS |
GATACAAAAGTTTATAAATG+GGG | 0.613101 | 2.1:-5040041 | None:intergenic |
AGATTACAGACTCTAATGCT+GGG | 0.615002 | 2.1:-5038811 | None:intergenic |
GGCAGAAAGCCAAATAGGAA+AGG | 0.615902 | 2.1:+5038544 | MS.gene056994:CDS |
TTTGCTTCATCCTTCTAGTG+AGG | 0.617630 | 2.1:+5041066 | MS.gene056994:CDS |
ATCTCCTACTAAGAGTTGGA+CGG | 0.618286 | 2.1:-5040733 | None:intergenic |
GAACTTGTAGAGGTTGGTCA+TGG | 0.619559 | 2.1:+5040566 | MS.gene056994:CDS |
GTGACGGGGATATTGAATAG+GGG | 0.620162 | 2.1:+5032657 | MS.gene056994:CDS |
TGGAAAAGGGAAGCTTGGAA+AGG | 0.620625 | 2.1:+5037872 | MS.gene056994:CDS |
CACCATGTTCATCTCCGTCA+GGG | 0.621638 | 2.1:-5039753 | None:intergenic |
CAATCCCTGGTCAACGATGG+AGG | 0.623263 | 2.1:+5040105 | MS.gene056994:CDS |
AGTACAAGGAGACATAGTCT+TGG | 0.623306 | 2.1:-5040490 | None:intergenic |
AACAGGAGAACGCAAAGAGT+GGG | 0.626268 | 2.1:+5038402 | MS.gene056994:CDS |
ACTGTCAACACCTTCTAGCG+CGG | 0.626642 | 2.1:-5039797 | None:intergenic |
ATATCTTCCTAGTGAAACAC+CGG | 0.628847 | 2.1:+5038327 | MS.gene056994:CDS |
TTGAGTTTGCCACACCCTGA+CGG | 0.630643 | 2.1:+5039739 | MS.gene056994:CDS |
TTGGTGGAAAGAACTTGTAG+AGG | 0.633539 | 2.1:+5040556 | MS.gene056994:CDS |
TATGGGCTGCCATAAAGACA+TGG | 0.637221 | 2.1:+5040465 | MS.gene056994:CDS |
CACAAGCTTAACACCACATG+GGG | 0.639779 | 2.1:-5040405 | None:intergenic |
TGCTCCCAATGTTGGTAACG+AGG | 0.641203 | 2.1:-5037919 | None:intergenic |
TTCATTGTATCACGATAGTG+AGG | 0.644461 | 2.1:-5040063 | None:intergenic |
TTGTCTAAGTATGTCATCTG+TGG | 0.645976 | 2.1:-5040516 | None:intergenic |
ATTAGTGCAACTAAACCTGA+TGG | 0.649396 | 2.1:+5032840 | MS.gene056994:CDS |
GGAAAGGCTACCTTTCTGGA+AGG | 0.651708 | 2.1:+5037888 | MS.gene056994:CDS |
GATACCTCCATCGTTGACCA+GGG | 0.658313 | 2.1:-5040109 | None:intergenic |
CCACAAGCTTAACACCACAT+GGG | 0.659696 | 2.1:-5040406 | None:intergenic |
GGGTCATAAGATAAAAGGAA+CGG | 0.661938 | 2.1:+5032677 | MS.gene056994:CDS |
CCTTGTTGGCAAAGAAAATG+CGG | 0.665349 | 2.1:-5038133 | None:intergenic |
AATATCCTTATCCTCGTAGG+GGG | 0.667235 | 2.1:+5038515 | MS.gene056994:CDS |
GCATCTGAACCGGTCCAAGA+CGG | 0.668784 | 2.1:-5041036 | None:intergenic |
AAACTCAACTCTATGGCCAG+TGG | 0.669772 | 2.1:-5039724 | None:intergenic |
ATGGGCTGCCATAAAGACAT+GGG | 0.671205 | 2.1:+5040466 | MS.gene056994:CDS |
TTTGAATGGGATGATGACAT+GGG | 0.675782 | 2.1:+5037966 | MS.gene056994:CDS |
AAACTGGACATCAGATACAA+GGG | 0.678771 | 2.1:+5040925 | MS.gene056994:CDS |
TCAACTGAAGAGAAACAGAA+CGG | 0.681236 | 2.1:-5032818 | None:intergenic |
GAATATCCTTATCCTCGTAG+GGG | 0.688179 | 2.1:+5038514 | MS.gene056994:CDS |
GCTTGCATCTTAGGCCACCA+CGG | 0.690210 | 2.1:-5040605 | None:intergenic |
GAGGATCCATCTTCCCCATG+TGG | 0.690379 | 2.1:+5040392 | MS.gene056994:CDS |
TCATAAGATAAAAGGAACGG+TGG | 0.723426 | 2.1:+5032680 | MS.gene056994:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 5032645 | 5041132 | 5032645 | ID=MS.gene056994 |
chr2.1 | mRNA | 5032645 | 5041132 | 5032645 | ID=MS.gene056994.t1;Parent=MS.gene056994 |
chr2.1 | exon | 5032645 | 5032861 | 5032645 | ID=MS.gene056994.t1.exon1;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5032645 | 5032861 | 5032645 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5037868 | 5038154 | 5037868 | ID=MS.gene056994.t1.exon2;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5037868 | 5038154 | 5037868 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5038325 | 5038565 | 5038325 | ID=MS.gene056994.t1.exon3;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5038325 | 5038565 | 5038325 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5038693 | 5039016 | 5038693 | ID=MS.gene056994.t1.exon4;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5038693 | 5039016 | 5038693 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5039139 | 5039224 | 5039139 | ID=MS.gene056994.t1.exon5;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5039139 | 5039224 | 5039139 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5039370 | 5039477 | 5039370 | ID=MS.gene056994.t1.exon6;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5039370 | 5039477 | 5039370 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5039586 | 5039890 | 5039586 | ID=MS.gene056994.t1.exon7;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5039586 | 5039890 | 5039586 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5039975 | 5040238 | 5039975 | ID=MS.gene056994.t1.exon8;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5039975 | 5040238 | 5039975 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
chr2.1 | exon | 5040379 | 5041132 | 5040379 | ID=MS.gene056994.t1.exon9;Parent=MS.gene056994.t1 |
chr2.1 | CDS | 5040379 | 5041132 | 5040379 | ID=cds.MS.gene056994.t1;Parent=MS.gene056994.t1 |
Gene Sequence |
Protein sequence |