Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85239.t1 | XP_003597559.1 | 99.1 | 861 | 8 | 0 | 1 | 861 | 1 | 861 | 0.00E+00 | 1754.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85239.t1 | P09918 | 92.2 | 861 | 67 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1648.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85239.t1 | G7IS30 | 99.1 | 861 | 8 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1754.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051967 | MS.gene85239 | 0.916302 | 2.10E-85 | -1.69E-46 |
MS.gene056994 | MS.gene85239 | 0.916334 | 2.02E-85 | -1.69E-46 |
MS.gene059667 | MS.gene85239 | 0.807577 | 4.72E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85239.t1 | MTR_2g099570 | 99.071 | 861 | 8 | 0 | 1 | 861 | 1 | 861 | 0.0 | 1769 |
MS.gene85239.t1 | MTR_2g099560 | 75.058 | 866 | 208 | 3 | 1 | 861 | 1 | 863 | 0.0 | 1367 |
MS.gene85239.t1 | MTR_8g018420 | 75.501 | 849 | 206 | 2 | 14 | 861 | 9 | 856 | 0.0 | 1355 |
MS.gene85239.t1 | MTR_8g018550 | 71.346 | 869 | 240 | 3 | 1 | 861 | 1 | 868 | 0.0 | 1284 |
MS.gene85239.t1 | MTR_8g018730 | 70.949 | 864 | 240 | 3 | 7 | 861 | 3 | 864 | 0.0 | 1281 |
MS.gene85239.t1 | MTR_8g020990 | 69.965 | 869 | 252 | 3 | 1 | 861 | 1 | 868 | 0.0 | 1275 |
MS.gene85239.t1 | MTR_8g018735 | 71.329 | 865 | 236 | 5 | 7 | 861 | 3 | 865 | 0.0 | 1274 |
MS.gene85239.t1 | MTR_8g018570 | 70.149 | 871 | 249 | 6 | 1 | 861 | 1 | 870 | 0.0 | 1271 |
MS.gene85239.t1 | MTR_5g024020 | 70.358 | 867 | 243 | 5 | 7 | 861 | 3 | 867 | 0.0 | 1267 |
MS.gene85239.t1 | MTR_8g018690 | 70.034 | 871 | 245 | 3 | 1 | 861 | 1 | 865 | 0.0 | 1267 |
MS.gene85239.t1 | MTR_8g018430 | 69.106 | 861 | 259 | 4 | 6 | 861 | 3 | 861 | 0.0 | 1255 |
MS.gene85239.t1 | MTR_8g018520 | 69.390 | 869 | 257 | 4 | 1 | 861 | 1 | 868 | 0.0 | 1243 |
MS.gene85239.t1 | MTR_8g018510 | 67.882 | 878 | 256 | 6 | 1 | 861 | 1 | 869 | 0.0 | 1232 |
MS.gene85239.t1 | MTR_8g018690 | 68.197 | 871 | 241 | 4 | 1 | 861 | 1 | 845 | 0.0 | 1221 |
MS.gene85239.t1 | MTR_8g018730 | 68.287 | 864 | 233 | 4 | 7 | 861 | 3 | 834 | 0.0 | 1215 |
MS.gene85239.t1 | MTR_5g024020 | 67.474 | 867 | 232 | 6 | 7 | 861 | 3 | 831 | 0.0 | 1201 |
MS.gene85239.t1 | MTR_3g081130 | 65.233 | 860 | 288 | 6 | 8 | 861 | 4 | 858 | 0.0 | 1168 |
MS.gene85239.t1 | MTR_1g083020 | 62.457 | 871 | 300 | 8 | 1 | 861 | 5 | 858 | 0.0 | 1116 |
MS.gene85239.t1 | MTR_3g081130 | 66.413 | 789 | 259 | 4 | 75 | 861 | 2 | 786 | 0.0 | 1104 |
MS.gene85239.t1 | MTR_8g018450 | 62.920 | 863 | 270 | 8 | 9 | 861 | 6 | 828 | 0.0 | 1104 |
MS.gene85239.t1 | MTR_7g113410 | 59.343 | 883 | 321 | 11 | 1 | 861 | 1 | 867 | 0.0 | 1063 |
MS.gene85239.t1 | MTR_1g104650 | 56.437 | 870 | 346 | 10 | 9 | 861 | 3 | 856 | 0.0 | 1011 |
MS.gene85239.t1 | MTR_8g018650 | 58.178 | 856 | 303 | 8 | 9 | 861 | 4 | 807 | 0.0 | 999 |
MS.gene85239.t1 | MTR_8g018620 | 57.643 | 857 | 306 | 10 | 9 | 861 | 4 | 807 | 0.0 | 991 |
MS.gene85239.t1 | MTR_8g018590 | 58.293 | 820 | 295 | 11 | 58 | 861 | 35 | 823 | 0.0 | 943 |
MS.gene85239.t1 | MTR_8g018730 | 73.630 | 584 | 153 | 1 | 278 | 861 | 2 | 584 | 0.0 | 910 |
MS.gene85239.t1 | MTR_8g018735 | 70.569 | 615 | 169 | 5 | 7 | 611 | 3 | 615 | 0.0 | 883 |
MS.gene85239.t1 | MTR_8g020970 | 45.917 | 845 | 435 | 14 | 29 | 860 | 91 | 926 | 0.0 | 734 |
MS.gene85239.t1 | MTR_8g080230 | 44.769 | 822 | 423 | 15 | 57 | 861 | 109 | 916 | 0.0 | 692 |
MS.gene85239.t1 | MTR_3g479460 | 42.477 | 864 | 450 | 15 | 11 | 861 | 74 | 903 | 0.0 | 681 |
MS.gene85239.t1 | MTR_4g066170 | 42.396 | 868 | 471 | 17 | 10 | 861 | 52 | 906 | 0.0 | 672 |
MS.gene85239.t1 | MTR_3g079450 | 41.860 | 860 | 465 | 15 | 19 | 861 | 61 | 902 | 0.0 | 669 |
MS.gene85239.t1 | MTR_8g011340 | 42.590 | 803 | 420 | 15 | 50 | 827 | 47 | 833 | 0.0 | 641 |
MS.gene85239.t1 | MTR_4g088810 | 41.455 | 825 | 434 | 16 | 53 | 860 | 102 | 894 | 0.0 | 626 |
MS.gene85239.t1 | MTR_3g079420 | 43.693 | 769 | 411 | 11 | 106 | 861 | 106 | 865 | 0.0 | 615 |
MS.gene85239.t1 | MTR_8g021020 | 70.633 | 395 | 115 | 1 | 468 | 861 | 37 | 431 | 0.0 | 583 |
MS.gene85239.t1 | MTR_8g020970 | 44.538 | 595 | 309 | 13 | 29 | 611 | 91 | 676 | 2.89e-156 | 473 |
MS.gene85239.t1 | MTR_6g452500 | 39.706 | 612 | 334 | 12 | 250 | 844 | 12 | 605 | 1.22e-149 | 454 |
MS.gene85239.t1 | MTR_3g079450 | 41.118 | 608 | 325 | 14 | 19 | 611 | 61 | 650 | 7.71e-142 | 435 |
MS.gene85239.t1 | MTR_7g012030 | 59.829 | 117 | 46 | 1 | 516 | 631 | 87 | 203 | 1.43e-40 | 149 |
MS.gene85239.t1 | MTR_6g046330 | 53.906 | 128 | 47 | 2 | 516 | 631 | 77 | 204 | 7.29e-35 | 135 |
MS.gene85239.t1 | MTR_3g107560 | 38.767 | 227 | 76 | 7 | 639 | 861 | 7 | 174 | 2.53e-34 | 129 |
MS.gene85239.t1 | MTR_8g463810 | 33.468 | 248 | 93 | 7 | 401 | 647 | 181 | 357 | 2.82e-31 | 127 |
MS.gene85239.t1 | MTR_2g005920 | 58.333 | 60 | 24 | 1 | 735 | 794 | 58 | 116 | 1.90e-17 | 79.7 |
MS.gene85239.t1 | MTR_7g113408 | 54.839 | 62 | 28 | 0 | 754 | 815 | 8 | 69 | 3.61e-17 | 77.8 |
MS.gene85239.t1 | MTR_4g088805 | 42.857 | 91 | 51 | 1 | 771 | 860 | 1 | 91 | 9.63e-16 | 73.6 |
MS.gene85239.t1 | MTR_5g023990 | 42.647 | 68 | 26 | 1 | 647 | 714 | 145 | 199 | 8.14e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85239.t1 | AT1G55020 | 60.068 | 879 | 313 | 10 | 1 | 861 | 1 | 859 | 0.0 | 1077 |
MS.gene85239.t1 | AT3G22400 | 56.962 | 869 | 337 | 10 | 14 | 861 | 34 | 886 | 0.0 | 1017 |
MS.gene85239.t1 | AT1G72520 | 45.255 | 822 | 431 | 11 | 50 | 861 | 114 | 926 | 0.0 | 721 |
MS.gene85239.t1 | AT1G17420 | 44.289 | 858 | 445 | 13 | 14 | 861 | 85 | 919 | 0.0 | 712 |
MS.gene85239.t1 | AT3G45140 | 43.705 | 826 | 427 | 19 | 50 | 861 | 95 | 896 | 0.0 | 662 |
MS.gene85239.t1 | AT1G67560 | 44.161 | 822 | 427 | 14 | 57 | 861 | 111 | 917 | 0.0 | 658 |
MS.gene85239.t1 | AT3G45140 | 45.229 | 765 | 393 | 15 | 110 | 861 | 3 | 754 | 0.0 | 650 |
Find 200 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTATTTCCAAACTTCTTAA+AGG | 0.131647 | 2.4:-4687151 | None:intergenic |
CTTCATGCAGCTGTTAATTT+TGG | 0.135058 | 2.4:+4686874 | MS.gene85239:CDS |
GCTTGGAAAGGCTACCTTTC+TGG | 0.147026 | 2.4:+4684075 | MS.gene85239:CDS |
GTCTTGGACCCATGTCTTTA+TGG | 0.177320 | 2.4:-4686668 | None:intergenic |
GAAGTTTAACCTTTCCTATT+TGG | 0.185897 | 2.4:-4684744 | None:intergenic |
TATGATGTCTACAATGATTT+AGG | 0.198014 | 2.4:+4684630 | MS.gene85239:CDS |
ACTCAATAATGCCATATTTA+AGG | 0.200843 | 2.4:+4685820 | MS.gene85239:CDS |
AGGATACAAAAGTTTATAAA+TGG | 0.201433 | 2.4:-4686237 | None:intergenic |
TCGATAAGTGTCTGAAATTT+TGG | 0.216610 | 2.4:-4687027 | None:intergenic |
CTCATGATGGATTAGATATA+TGG | 0.224741 | 2.4:+4686641 | MS.gene85239:CDS |
CTTCTAAAGTTTACAAGAAT+TGG | 0.234179 | 2.4:+4686369 | MS.gene85239:CDS |
TCTTCACGAGCTTGCATCTT+AGG | 0.236547 | 2.4:-4686808 | None:intergenic |
GATAATCTTACTGCTTTCTT+AGG | 0.245074 | 2.4:+4681003 | MS.gene85239:CDS |
ACCAGTGTTGGTGGAGTTAT+TGG | 0.257398 | 2.4:+4680949 | MS.gene85239:CDS |
GAAATACCTTGAAGTACTTT+AGG | 0.278008 | 2.4:-4685192 | None:intergenic |
TTAGAGGCCTTTAAGAAGTT+TGG | 0.281957 | 2.4:+4687144 | MS.gene85239:CDS |
ACTGTGAGCCCTTCTAAATT+AGG | 0.288323 | 2.4:-4685642 | None:intergenic |
GAGTTTATTCGCCTTAAATA+TGG | 0.300979 | 2.4:-4685831 | None:intergenic |
TGACAGTACTATTTGGTTAC+TGG | 0.304403 | 2.4:+4686007 | MS.gene85239:CDS |
TCTTCTCTGTAATGGACTAA+TGG | 0.308219 | 2.4:-4684543 | None:intergenic |
CTTCCAAGAGATGAAGCTTT+TGG | 0.309488 | 2.4:+4684919 | MS.gene85239:CDS |
AATAGGGGTCATAAGATAAA+AGG | 0.310068 | 2.4:+4680880 | MS.gene85239:CDS |
AAGTAGATGCTTCCATGATT+TGG | 0.311647 | 2.4:-4684256 | None:intergenic |
ATTAGGTTCTAGGTGTTCTT+TGG | 0.320520 | 2.4:-4685625 | None:intergenic |
GCCCTTCTAAATTAGGTTCT+AGG | 0.324988 | 2.4:-4685635 | None:intergenic |
CCAATTCTTCTTCTCTGTAA+TGG | 0.332097 | 2.4:-4684551 | None:intergenic |
CTTCAGATAGAGATACTATT+AGG | 0.343809 | 2.4:-4687306 | None:intergenic |
GATAGCTTTGATGAAGTTCA+TGG | 0.345965 | 2.4:+4685054 | MS.gene85239:CDS |
CACCTAGAACCTAATTTAGA+AGG | 0.346924 | 2.4:+4685633 | MS.gene85239:CDS |
GAAGGATGAAGCAAAGTATA+AGG | 0.351751 | 2.4:-4687252 | None:intergenic |
TGCCTGCTGATCTTATAAAA+AGG | 0.357335 | 2.4:+4686411 | MS.gene85239:CDS |
GGTCAAGGTTTCGACATTCT+TGG | 0.358750 | 2.4:+4680970 | MS.gene85239:CDS |
AATCATGCTCGTCCTGTTCT+TGG | 0.365294 | 2.4:+4684672 | MS.gene85239:CDS |
ATCAGATACAAGGGCATTAG+AGG | 0.370748 | 2.4:+4687128 | MS.gene85239:CDS |
TATTCAGCTGACCCTTTCTC+TGG | 0.371851 | 2.4:-4686955 | None:intergenic |
CTTGTATCTGATGTCCAGTT+TGG | 0.373343 | 2.4:-4687117 | None:intergenic |
TGAAGACAGCAGATCACATT+TGG | 0.374523 | 2.4:-4685395 | None:intergenic |
GAAGAATTGGATAATTTAAG+AGG | 0.378647 | 2.4:+4684564 | MS.gene85239:CDS |
TGACCAAAAGCTTCATCTCT+TGG | 0.391538 | 2.4:-4684922 | None:intergenic |
GCGGTCAAGTTTGTGGTGTT+TGG | 0.393878 | 2.4:-4684305 | None:intergenic |
GAACTGGCAGAAAGCCAAAT+AGG | 0.394315 | 2.4:+4684730 | MS.gene85239:CDS |
GTTGATGAGAAAGAACGTTT+TGG | 0.396705 | 2.4:+4680912 | MS.gene85239:CDS |
GGATACAAAAGTTTATAAAT+GGG | 0.397641 | 2.4:-4686236 | None:intergenic |
AAGGTGTTGACAGTACTATT+TGG | 0.399757 | 2.4:+4686000 | MS.gene85239:CDS |
TCAAAGCTATCAAACTCATT+TGG | 0.400263 | 2.4:-4685042 | None:intergenic |
GATGATGACATGGGAATTCC+TGG | 0.404317 | 2.4:+4684166 | MS.gene85239:CDS |
CCATTACAGAGAAGAAGAAT+TGG | 0.410502 | 2.4:+4684551 | MS.gene85239:CDS |
AAGTTTGCACTACTGTCATA+TGG | 0.411943 | 2.4:+4686839 | MS.gene85239:CDS |
GTGTGGCAAACTCAACTCTA+TGG | 0.415566 | 2.4:-4685925 | None:intergenic |
GTTTATCAACCCGCGCTAGA+AGG | 0.415970 | 2.4:+4685981 | MS.gene85239:CDS |
TCTAATCCATCATGAGCATA+AGG | 0.416079 | 2.4:-4686634 | None:intergenic |
CAAGTTCTTTCCACCAAGCT+TGG | 0.416248 | 2.4:-4686744 | None:intergenic |
AAATGTGATCTGCTGTCTTC+AGG | 0.419247 | 2.4:+4685397 | MS.gene85239:CDS |
ATTTCTTTGAGCACAGGTAA+TGG | 0.423088 | 2.4:-4685129 | None:intergenic |
GTAAGTCCTTCCTCACTAGA+AGG | 0.433641 | 2.4:-4687270 | None:intergenic |
TACTATTTGGTTACTGGCTA+AGG | 0.437631 | 2.4:+4686013 | MS.gene85239:CDS |
TTTGCAAGAGAAATGCTTGC+TGG | 0.439835 | 2.4:+4685365 | MS.gene85239:CDS |
CCACCACCTAAAGTACTTCA+AGG | 0.442382 | 2.4:+4685186 | MS.gene85239:CDS |
TACAAGAATTGGACTTTGCC+AGG | 0.442800 | 2.4:+4686380 | MS.gene85239:CDS |
CTACAATGATTTAGGAAATC+CGG | 0.445050 | 2.4:+4684638 | MS.gene85239:CDS |
CTTGAAGACATTCCAAATCA+TGG | 0.449276 | 2.4:+4684244 | MS.gene85239:CDS |
GGGTGACGGGGATATTGAAT+AGG | 0.449380 | 2.4:+4680863 | MS.gene85239:CDS |
AAGCTAGATAGCCAAGTCTA+TGG | 0.450182 | 2.4:+4685582 | MS.gene85239:CDS |
TAAACTGTTATTTAGAGGAA+TGG | 0.452635 | 2.4:+4686558 | MS.gene85239:intron |
GGTGACGGGGATATTGAATA+GGG | 0.454200 | 2.4:+4680864 | MS.gene85239:CDS |
AATTTAAGAGGAGATGGAAC+AGG | 0.457209 | 2.4:+4684576 | MS.gene85239:CDS |
TTGGATAATTTAAGAGGAGA+TGG | 0.457945 | 2.4:+4684570 | MS.gene85239:CDS |
ATTACCTCGTTACCAACATT+GGG | 0.468046 | 2.4:+4684106 | MS.gene85239:CDS |
CGAAAGATTTCTTTGAGCAC+AGG | 0.468335 | 2.4:-4685135 | None:intergenic |
TTCTCTTGCTCGACAATCCC+TGG | 0.469936 | 2.4:+4686286 | MS.gene85239:CDS |
AAAGTATAAGGCATCTGAAC+CGG | 0.470881 | 2.4:-4687240 | None:intergenic |
CATGCTCGTCCTGTTCTTGG+AGG | 0.471870 | 2.4:+4684675 | MS.gene85239:CDS |
AGGAGATTCATGCCAGAGAA+AGG | 0.472743 | 2.4:+4686943 | MS.gene85239:CDS |
GCACCATGTTCATCTCCGTC+AGG | 0.473569 | 2.4:-4685948 | None:intergenic |
TCTACTTTGTATGCAACTCC+TGG | 0.474359 | 2.4:+4684272 | MS.gene85239:CDS |
AATTACCTCGTTACCAACAT+TGG | 0.475554 | 2.4:+4684105 | MS.gene85239:CDS |
TCATCAGACCCTCCAAGAAC+AGG | 0.477028 | 2.4:-4684684 | None:intergenic |
GAGAGAGAGACAATCCAAAC+TGG | 0.477917 | 2.4:+4687103 | MS.gene85239:CDS |
TGATACCTCCATCGTTGACC+AGG | 0.480839 | 2.4:-4686304 | None:intergenic |
TGGTGTTAAGCTTGTGGTAG+AGG | 0.485525 | 2.4:+4686606 | MS.gene85239:CDS |
CTGTTAGTTGCTATGACAAA+TGG | 0.485866 | 2.4:-4686194 | None:intergenic |
CCTTGATAATATCTCTATAA+CGG | 0.488021 | 2.4:-4687055 | None:intergenic |
TGAAGTTCATGGATTGTATG+AGG | 0.488443 | 2.4:+4685065 | MS.gene85239:CDS |
AGAAAATGCGGTCAAGTTTG+TGG | 0.492571 | 2.4:-4684312 | None:intergenic |
CTTCATCCTTCTAGTGAGGA+AGG | 0.493335 | 2.4:+4687264 | MS.gene85239:CDS |
AAGATTACAGACTCTAATGC+TGG | 0.496355 | 2.4:-4685003 | None:intergenic |
GCAAATGGAAAAGGGAAGCT+TGG | 0.496407 | 2.4:+4684058 | MS.gene85239:intron |
ATTTAGAGGAATGGCAATTG+AGG | 0.498020 | 2.4:+4686567 | MS.gene85239:intron |
TAAACCGTCCAACTCTTAGT+AGG | 0.498943 | 2.4:+4686923 | MS.gene85239:CDS |
GATTACCCTTATGCTCATGA+TGG | 0.501130 | 2.4:+4686628 | MS.gene85239:CDS |
TGAATATCCTTATCCTCGTA+GGG | 0.505776 | 2.4:+4684704 | MS.gene85239:CDS |
TGGCTATCTAGCTTGCTTCG+CGG | 0.506787 | 2.4:-4685573 | None:intergenic |
TTATTAATTGAACAGTAAGT+AGG | 0.507897 | 2.4:+4685318 | MS.gene85239:intron |
ACCAATAACTCCACCAACAC+TGG | 0.508894 | 2.4:-4680950 | None:intergenic |
ATCATCAACTTGTCAGCCAT+TGG | 0.511038 | 2.4:+4686063 | MS.gene85239:CDS |
GTTGGTGGAGTTATTGGTCA+AGG | 0.511646 | 2.4:+4680955 | MS.gene85239:CDS |
CGAGTAGCATAAGCCTTCGT+TGG | 0.513089 | 2.4:-4685858 | None:intergenic |
CAAACTGGACATCAGATACA+AGG | 0.515129 | 2.4:+4687118 | MS.gene85239:CDS |
CCTTGAAGTACTTTAGGTGG+TGG | 0.515750 | 2.4:-4685186 | None:intergenic |
ATAAATAGTTTAACCAGTGT+TGG | 0.520445 | 2.4:+4680937 | MS.gene85239:CDS |
AATAGTTTAACCAGTGTTGG+TGG | 0.524770 | 2.4:+4680940 | MS.gene85239:CDS |
TCATGATGGATTAGATATAT+GGG | 0.524917 | 2.4:+4686642 | MS.gene85239:CDS |
GCTAGTCAAAAGTCCACAAA+AGG | 0.525330 | 2.4:+4686984 | MS.gene85239:CDS |
GTGTTTGGCATTATAAATCC+AGG | 0.526188 | 2.4:-4684290 | None:intergenic |
GCTGACAAGTTGATGATAGC+AGG | 0.527862 | 2.4:-4686057 | None:intergenic |
CCGTTATAGAGATATTATCA+AGG | 0.528835 | 2.4:+4687055 | MS.gene85239:CDS |
TTGAGTCATGGTGATCTAGC+AGG | 0.529146 | 2.4:-4685803 | None:intergenic |
ATTCTGAACTCCAAGCTTGG+TGG | 0.533029 | 2.4:+4686734 | MS.gene85239:CDS |
GGAGATTCATGCCAGAGAAA+GGG | 0.533470 | 2.4:+4686944 | MS.gene85239:CDS |
CTAATCCATCATGAGCATAA+GGG | 0.533765 | 2.4:-4686633 | None:intergenic |
ATGAATATCCTTATCCTCGT+AGG | 0.539701 | 2.4:+4684703 | MS.gene85239:CDS |
TGGAAAGAACTTGTAGAGGT+TGG | 0.540154 | 2.4:+4686754 | MS.gene85239:CDS |
TTGGATTGTCTCTCTCTCCA+AGG | 0.544752 | 2.4:-4687098 | None:intergenic |
TTCTTGATGTAAAATGCTCC+AGG | 0.545064 | 2.4:-4684184 | None:intergenic |
TTAACACCACACGGGGAAGA+TGG | 0.545623 | 2.4:-4686592 | None:intergenic |
GGTAATTATACCTTCCAGAA+AGG | 0.548726 | 2.4:-4684089 | None:intergenic |
TGTTCATCTCCGTCAGGGTG+TGG | 0.548827 | 2.4:-4685942 | None:intergenic |
AAGATTCTGAACTCCAAGCT+TGG | 0.549849 | 2.4:+4686731 | MS.gene85239:CDS |
TTTGGACAGTATTCCTATGG+TGG | 0.549856 | 2.4:+4686892 | MS.gene85239:CDS |
GTCACTGCTCAAGAAAAGGA+TGG | 0.551825 | 2.4:-4685883 | None:intergenic |
GATTTAGGAAATCCGGAGAA+AGG | 0.552556 | 2.4:+4684645 | MS.gene85239:CDS |
AATATGGCATTATTGAGTCA+TGG | 0.552570 | 2.4:-4685815 | None:intergenic |
GTTTAATATTAAACCACCAT+AGG | 0.555608 | 2.4:-4686905 | None:intergenic |
TGACAAAACTTTGAAGCCAC+TGG | 0.555755 | 2.4:+4685902 | MS.gene85239:CDS |
CTATCTAGCTTGCTTCGCGG+AGG | 0.556211 | 2.4:-4685570 | None:intergenic |
AACTTTAGAAGACATTTCCA+TGG | 0.557234 | 2.4:-4686357 | None:intergenic |
GATTGTCCTTCTCCCAATGT+TGG | 0.557834 | 2.4:-4684118 | None:intergenic |
AATAAACTCGACTCCAACGA+AGG | 0.561264 | 2.4:+4685845 | MS.gene85239:CDS |
AAAGAAATCTTTCGAACCGA+TGG | 0.561372 | 2.4:+4685144 | MS.gene85239:CDS |
ATCTTGCTAAGTACATCTGT+TGG | 0.562012 | 2.4:-4685102 | None:intergenic |
GTCATCTGTGGTGTAGTACA+AGG | 0.566258 | 2.4:-4686698 | None:intergenic |
CTGTAATGGACTAATGGAGC+CGG | 0.568264 | 2.4:-4684537 | None:intergenic |
GCTTCTGATGAAGTGTACCT+TGG | 0.568815 | 2.4:+4687081 | MS.gene85239:CDS |
AATGGAGCCGGTGTTTCACT+AGG | 0.568995 | 2.4:-4684525 | None:intergenic |
AGAAGGGCTCACAGTAGAAG+AGG | 0.571068 | 2.4:+4685650 | MS.gene85239:CDS |
TTTGTGGGGAAGATATTCCA+TGG | 0.571326 | 2.4:+4686340 | MS.gene85239:CDS |
GCTAAGACACCGTCTTGGAC+CGG | 0.576095 | 2.4:+4687221 | MS.gene85239:CDS |
TATCTAGCTTGCTTCGCGGA+GGG | 0.580254 | 2.4:-4685569 | None:intergenic |
GAGAAGCTAAGACACCGTCT+TGG | 0.580287 | 2.4:+4687216 | MS.gene85239:CDS |
ATGCTCGTCCTGTTCTTGGA+GGG | 0.582766 | 2.4:+4684676 | MS.gene85239:CDS |
ACCACAAGCTTAACACCACA+CGG | 0.586103 | 2.4:-4686601 | None:intergenic |
ACCTAGAACCTAATTTAGAA+GGG | 0.587489 | 2.4:+4685634 | MS.gene85239:CDS |
ATGAATCTCCTACTAAGAGT+TGG | 0.587805 | 2.4:-4686931 | None:intergenic |
GAGAACGCAAAGAGTGGGAA+AGG | 0.590166 | 2.4:+4684598 | MS.gene85239:CDS |
CTTTAGGTGGTGGATACTTG+AGG | 0.590324 | 2.4:-4685176 | None:intergenic |
ATAATATCTCTATAACGGAA+AGG | 0.590956 | 2.4:-4687050 | None:intergenic |
CTGTCAACACCTTCTAGCGC+GGG | 0.591310 | 2.4:-4685990 | None:intergenic |
TCAGCAGGCAATGCTTGACC+TGG | 0.597933 | 2.4:-4686398 | None:intergenic |
GAACAGTAAGTAGGTCTGCA+TGG | 0.598243 | 2.4:+4685327 | MS.gene85239:intron |
GAACAGGAGAACGCAAAGAG+TGG | 0.600744 | 2.4:+4684592 | MS.gene85239:CDS |
CTTCAAGAGTCAAACTCACA+AGG | 0.601849 | 2.4:-4684228 | None:intergenic |
CAGATCCTAAAAGTGAGAGT+AGG | 0.603906 | 2.4:+4684881 | MS.gene85239:intron |
GAAGTTCATGGATTGTATGA+GGG | 0.604985 | 2.4:+4685066 | MS.gene85239:CDS |
CGACAATCCCTGGTCAACGA+TGG | 0.605478 | 2.4:+4686296 | MS.gene85239:CDS |
CTTGAGGAACTGTTCACCAT+CGG | 0.606084 | 2.4:-4685160 | None:intergenic |
GAAAGCAGTATCTCAAAATG+TGG | 0.606848 | 2.4:+4684978 | MS.gene85239:CDS |
ATACCTTGAAGTACTTTAGG+TGG | 0.608053 | 2.4:-4685189 | None:intergenic |
GTTCATGGATTGTATGAGGG+TGG | 0.608173 | 2.4:+4685069 | MS.gene85239:CDS |
CACCCTGACGGAGATGAACA+TGG | 0.612917 | 2.4:+4685945 | MS.gene85239:CDS |
GATACAAAAGTTTATAAATG+GGG | 0.613101 | 2.4:-4686235 | None:intergenic |
AGATTACAGACTCTAATGCT+GGG | 0.615002 | 2.4:-4685002 | None:intergenic |
GGCAGAAAGCCAAATAGGAA+AGG | 0.615902 | 2.4:+4684735 | MS.gene85239:CDS |
TTTGCTTCATCCTTCTAGTG+AGG | 0.617630 | 2.4:+4687260 | MS.gene85239:CDS |
ATCTCCTACTAAGAGTTGGA+CGG | 0.618286 | 2.4:-4686927 | None:intergenic |
GAACTTGTAGAGGTTGGTCA+TGG | 0.619559 | 2.4:+4686760 | MS.gene85239:CDS |
GTGACGGGGATATTGAATAG+GGG | 0.620162 | 2.4:+4680865 | MS.gene85239:CDS |
TGGAAAAGGGAAGCTTGGAA+AGG | 0.620625 | 2.4:+4684063 | MS.gene85239:CDS |
CACCATGTTCATCTCCGTCA+GGG | 0.621638 | 2.4:-4685947 | None:intergenic |
CCTTGTTTGCAAAGAAAATG+CGG | 0.622969 | 2.4:-4684324 | None:intergenic |
CAATCCCTGGTCAACGATGG+AGG | 0.623263 | 2.4:+4686299 | MS.gene85239:CDS |
AGTACAAGGAGACATAGTCT+TGG | 0.623306 | 2.4:-4686684 | None:intergenic |
AACAGGAGAACGCAAAGAGT+GGG | 0.626268 | 2.4:+4684593 | MS.gene85239:CDS |
ACTGTCAACACCTTCTAGCG+CGG | 0.626642 | 2.4:-4685991 | None:intergenic |
ATATCTTCCTAGTGAAACAC+CGG | 0.628847 | 2.4:+4684518 | MS.gene85239:CDS |
TTGAGTTTGCCACACCCTGA+CGG | 0.630643 | 2.4:+4685933 | MS.gene85239:CDS |
TAGTGTGATCACCATAGACT+TGG | 0.633504 | 2.4:-4685593 | None:intergenic |
TTGGTGGAAAGAACTTGTAG+AGG | 0.633539 | 2.4:+4686750 | MS.gene85239:CDS |
TTCTCCCAATGTTGGTAACG+AGG | 0.634059 | 2.4:-4684110 | None:intergenic |
TATGGGCTGCCATAAAGACA+TGG | 0.637221 | 2.4:+4686659 | MS.gene85239:CDS |
TCGTTACCAACATTGGGAGA+AGG | 0.638378 | 2.4:+4684112 | MS.gene85239:CDS |
CACAAGCTTAACACCACACG+GGG | 0.639779 | 2.4:-4686599 | None:intergenic |
TTCATTGTATCACGATAGTG+AGG | 0.644461 | 2.4:-4686257 | None:intergenic |
TTGTCTAAGTATGTCATCTG+TGG | 0.645976 | 2.4:-4686710 | None:intergenic |
CCCGTGTGGTGTTAAGCTTG+TGG | 0.646954 | 2.4:+4686600 | MS.gene85239:CDS |
ATTAGTGCAACTAAACCTGA+TGG | 0.649396 | 2.4:+4681048 | MS.gene85239:CDS |
CCACAAGCTTAACACCACAC+GGG | 0.650346 | 2.4:-4686600 | None:intergenic |
GGAAAGGCTACCTTTCTGGA+AGG | 0.651708 | 2.4:+4684079 | MS.gene85239:CDS |
GATACCTCCATCGTTGACCA+GGG | 0.658313 | 2.4:-4686303 | None:intergenic |
GGGTCATAAGATAAAAGGAA+CGG | 0.661938 | 2.4:+4680885 | MS.gene85239:CDS |
AATATCCTTATCCTCGTAGG+GGG | 0.667235 | 2.4:+4684706 | MS.gene85239:CDS |
GCATCTGAACCGGTCCAAGA+CGG | 0.668784 | 2.4:-4687230 | None:intergenic |
AAACTCAACTCTATGGCCAG+TGG | 0.669772 | 2.4:-4685918 | None:intergenic |
ATGGGCTGCCATAAAGACAT+GGG | 0.671205 | 2.4:+4686660 | MS.gene85239:CDS |
TTTGAATGGGATGATGACAT+GGG | 0.675782 | 2.4:+4684157 | MS.gene85239:CDS |
AAACTGGACATCAGATACAA+GGG | 0.678771 | 2.4:+4687119 | MS.gene85239:CDS |
TCAACTGAAGAGAAACAGAA+CGG | 0.681236 | 2.4:-4681026 | None:intergenic |
GAATATCCTTATCCTCGTAG+GGG | 0.688179 | 2.4:+4684705 | MS.gene85239:CDS |
GAGGATCCATCTTCCCCGTG+TGG | 0.688451 | 2.4:+4686586 | MS.gene85239:CDS |
GCTTGCATCTTAGGCCACCA+CGG | 0.690210 | 2.4:-4686799 | None:intergenic |
TCATAAGATAAAAGGAACGG+TGG | 0.723426 | 2.4:+4680888 | MS.gene85239:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATTATTGAAAATGT+AGG | - | chr2.4:4681649-4681668 | None:intergenic | 10.0% |
!! | AAAAAATTATTGAAAATGTA+GGG | - | chr2.4:4681648-4681667 | None:intergenic | 10.0% |
!! | AAAGATACATAAATAATATA+GGG | + | chr2.4:4681823-4681842 | MS.gene85239:intron | 10.0% |
!! | AAGATAATTAAAAAATTGTA+TGG | + | chr2.4:4684490-4684509 | MS.gene85239:intron | 10.0% |
!! | AATAATTGTTTAAATACAAA+AGG | - | chr2.4:4682405-4682424 | None:intergenic | 10.0% |
!! | TTAATTATATTATAATCGTA+TGG | + | chr2.4:4685715-4685734 | MS.gene85239:intron | 10.0% |
!!! | AAAAAAAAAAAGTAGTTTTA+AGG | - | chr2.4:4685227-4685246 | None:intergenic | 10.0% |
!!! | AAGAAAAAAATATTAGTTTA+GGG | + | chr2.4:4682368-4682387 | MS.gene85239:intron | 10.0% |
!!! | ATTTATAAATTAGTTTATAG+CGG | + | chr2.4:4681507-4681526 | MS.gene85239:intron | 10.0% |
!! | AAAAATTATTGAAAATGTAG+GGG | - | chr2.4:4681647-4681666 | None:intergenic | 15.0% |
!! | ACATTATAATTAACATAGAA+AGG | - | chr2.4:4686524-4686543 | None:intergenic | 15.0% |
!! | ATAATTTACAAAGAAAAAGT+AGG | - | chr2.4:4681241-4681260 | None:intergenic | 15.0% |
!! | CAAAGATACATAAATAATAT+AGG | + | chr2.4:4681822-4681841 | MS.gene85239:intron | 15.0% |
!! | TAAATTATGTTTCTTATACT+CGG | + | chr2.4:4682433-4682452 | MS.gene85239:intron | 15.0% |
!! | TACCAAATTAATAAATGATA+TGG | - | chr2.4:4684793-4684812 | None:intergenic | 15.0% |
!! | TACCATATCATTTATTAATT+TGG | + | chr2.4:4684788-4684807 | MS.gene85239:intron | 15.0% |
!! | TTGTTTAAAAAACTGAAATA+CGG | + | chr2.4:4683757-4683776 | MS.gene85239:intron | 15.0% |
!!! | ACAATTGTATTTGATTTTAA+AGG | + | chr2.4:4685758-4685777 | MS.gene85239:intron | 15.0% |
!!! | ATATATCTTTGTTATATACA+GGG | - | chr2.4:4682488-4682507 | None:intergenic | 15.0% |
!!! | ATTCAAAATTCATTTTGAAT+GGG | + | chr2.4:4684144-4684163 | MS.gene85239:CDS | 15.0% |
!!! | CAAGAAAAAAATATTAGTTT+AGG | + | chr2.4:4682367-4682386 | MS.gene85239:intron | 15.0% |
!!! | GTATTTGATACATTTTTATT+TGG | + | chr2.4:4684021-4684040 | MS.gene85239:intron | 15.0% |
!!! | TAATTTGCTATATATAGTAA+GGG | + | chr2.4:4682734-4682753 | MS.gene85239:intron | 15.0% |
!!! | TATGTTTGTTTATTTTGAAA+TGG | + | chr2.4:4684440-4684459 | MS.gene85239:intron | 15.0% |
!!! | TATTTATTTTTTCGGTAAAA+AGG | - | chr2.4:4683162-4683181 | None:intergenic | 15.0% |
!!! | TTAATTTGCTATATATAGTA+AGG | + | chr2.4:4682733-4682752 | MS.gene85239:intron | 15.0% |
!! | AAAATTATTGAAAATGTAGG+GGG | - | chr2.4:4681646-4681665 | None:intergenic | 20.0% |
!! | AAGAAAATAAGGTCTATAAT+TGG | + | chr2.4:4681962-4681981 | MS.gene85239:intron | 20.0% |
!! | ACCAGTAAACTAATTTATAA+CGG | + | chr2.4:4681467-4681486 | MS.gene85239:intron | 20.0% |
!! | ACTAAAAATATGTTTAACCT+TGG | + | chr2.4:4682032-4682051 | MS.gene85239:intron | 20.0% |
!! | AGGATACAAAAGTTTATAAA+TGG | - | chr2.4:4686240-4686259 | None:intergenic | 20.0% |
!! | ATTTACAAAACTTATACCAA+TGG | - | chr2.4:4686082-4686101 | None:intergenic | 20.0% |
!! | CCTCTTAAAAAAAGAAAATA+AGG | + | chr2.4:4681951-4681970 | MS.gene85239:intron | 20.0% |
!! | GATACAAAAGTTTATAAATG+GGG | - | chr2.4:4686238-4686257 | None:intergenic | 20.0% |
!! | GGATACAAAAGTTTATAAAT+GGG | - | chr2.4:4686239-4686258 | None:intergenic | 20.0% |
!! | GTAATATATATATTAGGCTA+TGG | + | chr2.4:4681702-4681721 | MS.gene85239:intron | 20.0% |
!! | TAATTAAAAAATTGTATGGC+AGG | + | chr2.4:4684494-4684513 | MS.gene85239:intron | 20.0% |
!! | TCATTACTAAATACTCATTT+AGG | + | chr2.4:4684410-4684429 | MS.gene85239:intron | 20.0% |
!! | TTATTAATTGAACAGTAAGT+AGG | + | chr2.4:4685318-4685337 | MS.gene85239:intron | 20.0% |
!! | TTTAACCCTTATAAGATTTA+AGG | - | chr2.4:4683029-4683048 | None:intergenic | 20.0% |
!! | TTTCTCATACCATTTATTAA+GGG | - | chr2.4:4683346-4683365 | None:intergenic | 20.0% |
!!! | AAAAAGGAGAAGAATTTTAA+TGG | - | chr2.4:4683146-4683165 | None:intergenic | 20.0% |
!!! | ATATTTTAGTATACTTTGGT+GGG | - | chr2.4:4683199-4683218 | None:intergenic | 20.0% |
!!! | ATTTTGAAATGATTTGTGTT+TGG | - | chr2.4:4683104-4683123 | None:intergenic | 20.0% |
!!! | CACAAGTGTTTTTTTATATT+TGG | + | chr2.4:4683941-4683960 | MS.gene85239:intron | 20.0% |
!!! | CATATATCTTTGTTATATAC+AGG | - | chr2.4:4682489-4682508 | None:intergenic | 20.0% |
!!! | CATTCAAAATTCATTTTGAA+TGG | + | chr2.4:4684143-4684162 | MS.gene85239:CDS | 20.0% |
!!! | CCTTATTTTCTTTTTTTAAG+AGG | - | chr2.4:4681954-4681973 | None:intergenic | 20.0% |
!!! | TAACTTTTTACGATGTTTTT+AGG | + | chr2.4:4682077-4682096 | MS.gene85239:intron | 20.0% |
!!! | TATATCTTTGTTATATACAG+GGG | - | chr2.4:4682487-4682506 | None:intergenic | 20.0% |
!!! | TATTATAGTTTTCGTATAAC+TGG | + | chr2.4:4686465-4686484 | MS.gene85239:intron | 20.0% |
!!! | TCACATATTTTAGTATACTT+TGG | - | chr2.4:4683203-4683222 | None:intergenic | 20.0% |
!!! | TCATTTATTAATTTGGTACT+TGG | + | chr2.4:4684795-4684814 | MS.gene85239:intron | 20.0% |
!!! | TGCTTGGTAATATATATATT+AGG | + | chr2.4:4681696-4681715 | MS.gene85239:intron | 20.0% |
!!! | TTTTGAAATGATTTGTGTTT+GGG | - | chr2.4:4683103-4683122 | None:intergenic | 20.0% |
! | AAATTATTGAAAATGTAGGG+GGG | - | chr2.4:4681645-4681664 | None:intergenic | 25.0% |
! | AAGTATAGTATAGTTGTAGA+TGG | - | chr2.4:4681321-4681340 | None:intergenic | 25.0% |
! | AATTGAACTTGAATCTCTTA+TGG | + | chr2.4:4682808-4682827 | MS.gene85239:intron | 25.0% |
! | ACAAAAATGCCCTTAATAAA+TGG | + | chr2.4:4683334-4683353 | MS.gene85239:intron | 25.0% |
! | ACTAACTATGTTATAATGCT+TGG | + | chr2.4:4681680-4681699 | MS.gene85239:intron | 25.0% |
! | ACTCAATAATGCCATATTTA+AGG | + | chr2.4:4685820-4685839 | MS.gene85239:CDS | 25.0% |
! | AGTCCATATAAATGAAAACA+AGG | + | chr2.4:4681920-4681939 | MS.gene85239:intron | 25.0% |
! | ATAAATAGTTTAACCAGTGT+TGG | + | chr2.4:4680937-4680956 | MS.gene85239:CDS | 25.0% |
! | ATGTTATATATAACCAGTGA+CGG | + | chr2.4:4681588-4681607 | MS.gene85239:intron | 25.0% |
! | CAAAAATTGTTGAAACTGTT+CGG | + | chr2.4:4682231-4682250 | MS.gene85239:intron | 25.0% |
! | CTTATTTCCAAACTTCTTAA+AGG | - | chr2.4:4687154-4687173 | None:intergenic | 25.0% |
! | CTTTCTCATACCATTTATTA+AGG | - | chr2.4:4683347-4683366 | None:intergenic | 25.0% |
! | GAAGAATTGGATAATTTAAG+AGG | + | chr2.4:4684564-4684583 | MS.gene85239:CDS | 25.0% |
! | GTAACTATATTTAGTATGAG+AGG | - | chr2.4:4682182-4682201 | None:intergenic | 25.0% |
! | GTTCAATTTCACTATAATGT+TGG | - | chr2.4:4682796-4682815 | None:intergenic | 25.0% |
! | GTTTAATATTAAACCACCAT+AGG | - | chr2.4:4686908-4686927 | None:intergenic | 25.0% |
! | TATACTTTATGAGTGTCAAA+CGG | + | chr2.4:4681334-4681353 | MS.gene85239:intron | 25.0% |
! | TATGATGTCTACAATGATTT+AGG | + | chr2.4:4684630-4684649 | MS.gene85239:CDS | 25.0% |
! | TGATCTTACATTAAGAAAGT+AGG | + | chr2.4:4681793-4681812 | MS.gene85239:intron | 25.0% |
! | TTCTTAATGTAAGATCATGA+TGG | - | chr2.4:4681790-4681809 | None:intergenic | 25.0% |
!! | ATAATATCTCTATAACGGAA+AGG | - | chr2.4:4687053-4687072 | None:intergenic | 25.0% |
!! | ATAGAAAGGTCTTTAAGTTT+AGG | - | chr2.4:4686510-4686529 | None:intergenic | 25.0% |
!! | ATCGAAAAAACATTTTTGTG+GGG | + | chr2.4:4686326-4686345 | MS.gene85239:CDS | 25.0% |
!! | ATGTTATTTGAACAACCATT+TGG | - | chr2.4:4681285-4681304 | None:intergenic | 25.0% |
!! | ATTTTGTTAGCAAATGGAAA+AGG | + | chr2.4:4684049-4684068 | MS.gene85239:intron | 25.0% |
!! | CATCGAAAAAACATTTTTGT+GGG | + | chr2.4:4686325-4686344 | MS.gene85239:CDS | 25.0% |
!! | CCTTGATAATATCTCTATAA+CGG | - | chr2.4:4687058-4687077 | None:intergenic | 25.0% |
!! | GAAATACGGAATTTGAAATT+TGG | + | chr2.4:4683771-4683790 | MS.gene85239:intron | 25.0% |
!! | GTTTGTAAACTGTTATTTAG+AGG | + | chr2.4:4686553-4686572 | MS.gene85239:intron | 25.0% |
!! | TAAACTGTTATTTAGAGGAA+TGG | + | chr2.4:4686558-4686577 | MS.gene85239:intron | 25.0% |
!! | TCATCAGATTTTCTTACTTA+TGG | + | chr2.4:4684952-4684971 | MS.gene85239:CDS | 25.0% |
!! | TCATCGAAAAAACATTTTTG+TGG | + | chr2.4:4686324-4686343 | MS.gene85239:CDS | 25.0% |
!! | TCCGTTATAAATTAGTTTAC+TGG | - | chr2.4:4681471-4681490 | None:intergenic | 25.0% |
!! | TCTAAAGTGACTCATAATTT+CGG | + | chr2.4:4683488-4683507 | MS.gene85239:intron | 25.0% |
!! | TCTTGATTCTTGATGATAAT+AGG | + | chr2.4:4686147-4686166 | MS.gene85239:intron | 25.0% |
!! | TCTTTGTTTGACAAAAATAG+CGG | + | chr2.4:4681441-4681460 | MS.gene85239:intron | 25.0% |
!! | TTTTGTTAGCAAATGGAAAA+GGG | + | chr2.4:4684050-4684069 | MS.gene85239:intron | 25.0% |
!!! | AGATCTTGTTCATTTTTTGA+GGG | + | chr2.4:4682892-4682911 | MS.gene85239:intron | 25.0% |
!!! | AGTCCTTGTTTTCATTTATA+TGG | - | chr2.4:4681926-4681945 | None:intergenic | 25.0% |
!!! | CATATTTTAGTATACTTTGG+TGG | - | chr2.4:4683200-4683219 | None:intergenic | 25.0% |
!!! | CTTCTAAAGTTTACAAGAAT+TGG | + | chr2.4:4686369-4686388 | MS.gene85239:CDS | 25.0% |
!!! | GTTTTGATTTTGTTAGCAAA+TGG | + | chr2.4:4684043-4684062 | MS.gene85239:intron | 25.0% |
!!! | TAAACACTTGTTATTGTGTT+TGG | - | chr2.4:4683574-4683593 | None:intergenic | 25.0% |
!!! | TCATGATGGATTAGATATAT+GGG | + | chr2.4:4686642-4686661 | MS.gene85239:CDS | 25.0% |
!!! | TGAAAGTGTATGATTTTGTA+AGG | + | chr2.4:4682009-4682028 | MS.gene85239:intron | 25.0% |
!!! | TTATGGTTTGTTTGATTAGA+GGG | + | chr2.4:4682825-4682844 | MS.gene85239:intron | 25.0% |
AAACTCACACACATAAATGT+TGG | - | chr2.4:4682290-4682309 | None:intergenic | 30.0% | |
AAGCGTCATATAATTTGAGA+CGG | - | chr2.4:4683246-4683265 | None:intergenic | 30.0% | |
AATAGGGGTCATAAGATAAA+AGG | + | chr2.4:4680880-4680899 | MS.gene85239:CDS | 30.0% | |
AATATGGCATTATTGAGTCA+TGG | - | chr2.4:4685818-4685837 | None:intergenic | 30.0% | |
ACACAGGTGTATGAAAAATT+AGG | + | chr2.4:4684377-4684396 | MS.gene85239:intron | 30.0% | |
ACCTAGAACCTAATTTAGAA+GGG | + | chr2.4:4685634-4685653 | MS.gene85239:CDS | 30.0% | |
ACTACTCTAAACCAAAAAGT+TGG | + | chr2.4:4685444-4685463 | MS.gene85239:intron | 30.0% | |
ATATATACACGTGATTAACC+AGG | + | chr2.4:4684350-4684369 | MS.gene85239:intron | 30.0% | |
ATGCGTCCTTAAATCTTATA+AGG | + | chr2.4:4683020-4683039 | MS.gene85239:intron | 30.0% | |
ATTATCTTCCTCGTGATTTA+TGG | - | chr2.4:4684478-4684497 | None:intergenic | 30.0% | |
CCGTTATAGAGATATTATCA+AGG | + | chr2.4:4687055-4687074 | MS.gene85239:CDS | 30.0% | |
CTACAATGATTTAGGAAATC+CGG | + | chr2.4:4684638-4684657 | MS.gene85239:CDS | 30.0% | |
GAAGTTTAACCTTTCCTATT+TGG | - | chr2.4:4684747-4684766 | None:intergenic | 30.0% | |
GAGTTTATTCGCCTTAAATA+TGG | - | chr2.4:4685834-4685853 | None:intergenic | 30.0% | |
GATAATCTTACTGCTTTCTT+AGG | + | chr2.4:4681003-4681022 | MS.gene85239:CDS | 30.0% | |
GATCATTGTTTGGTTATTAC+AGG | + | chr2.4:4685542-4685561 | MS.gene85239:intron | 30.0% | |
GATTGAGAGAAAAAAACAGT+AGG | + | chr2.4:4682553-4682572 | MS.gene85239:intron | 30.0% | |
GCTACCAACATTATTAGTAA+AGG | - | chr2.4:4683967-4683986 | None:intergenic | 30.0% | |
TAAGGACGCATTAAATATGA+AGG | - | chr2.4:4683011-4683030 | None:intergenic | 30.0% | |
TATAGTATAGTTGTAGATGG+AGG | - | chr2.4:4681318-4681337 | None:intergenic | 30.0% | |
TCAAAGCTATCAAACTCATT+TGG | - | chr2.4:4685045-4685064 | None:intergenic | 30.0% | |
TGCGTCCTTAAATCTTATAA+GGG | + | chr2.4:4683021-4683040 | MS.gene85239:intron | 30.0% | |
TGTTCAAATATCATTTCTCG+AGG | - | chr2.4:4681125-4681144 | None:intergenic | 30.0% | |
TTATTTGAACAACCATTTGG+TGG | - | chr2.4:4681282-4681301 | None:intergenic | 30.0% | |
TTGGATAATTTAAGAGGAGA+TGG | + | chr2.4:4684570-4684589 | MS.gene85239:CDS | 30.0% | |
! | AAACTACTTACACTTTAGGA+CGG | + | chr2.4:4683528-4683547 | MS.gene85239:intron | 30.0% |
! | AACTTTAGAAGACATTTCCA+TGG | - | chr2.4:4686360-4686379 | None:intergenic | 30.0% |
! | AATTTTGGACAGTATTCCTA+TGG | + | chr2.4:4686889-4686908 | MS.gene85239:CDS | 30.0% |
! | AGACTTGCATCATTTTCTTA+CGG | - | chr2.4:4683883-4683902 | None:intergenic | 30.0% |
! | CCTAAAGTGTAAGTAGTTTT+GGG | - | chr2.4:4683527-4683546 | None:intergenic | 30.0% |
! | GAAATACCTTGAAGTACTTT+AGG | - | chr2.4:4685195-4685214 | None:intergenic | 30.0% |
! | GCAAAGAAAATCCAACTTTT+TGG | - | chr2.4:4685458-4685477 | None:intergenic | 30.0% |
! | GGTTCAGATAACAATTTGTT+TGG | - | chr2.4:4683604-4683623 | None:intergenic | 30.0% |
! | TACCTTTTTATAAGATCAGC+AGG | - | chr2.4:4686416-4686435 | None:intergenic | 30.0% |
! | TCCTAAAGTGTAAGTAGTTT+TGG | - | chr2.4:4683528-4683547 | None:intergenic | 30.0% |
! | TTGGCCTTTACTAATAATGT+TGG | + | chr2.4:4683960-4683979 | MS.gene85239:intron | 30.0% |
! | TTGTAAGCTCTTGATTTTGT+AGG | - | chr2.4:4681867-4681886 | None:intergenic | 30.0% |
!! | AAGGAGAAGAATTTTAATGG+TGG | - | chr2.4:4683143-4683162 | None:intergenic | 30.0% |
!! | AGATCCAAAAGCACTTAATA+GGG | - | chr2.4:4685262-4685281 | None:intergenic | 30.0% |
!! | AGGAGAAGAATTTTAATGGT+GGG | - | chr2.4:4683142-4683161 | None:intergenic | 30.0% |
!! | CTAAAGTGTAAGTAGTTTTG+GGG | - | chr2.4:4683526-4683545 | None:intergenic | 30.0% |
!! | CTCATGATGGATTAGATATA+TGG | + | chr2.4:4686641-4686660 | MS.gene85239:CDS | 30.0% |
!! | CTTATGGTTTGTTTGATTAG+AGG | + | chr2.4:4682824-4682843 | MS.gene85239:intron | 30.0% |
!! | TATGGTTTGTTTGATTAGAG+GGG | + | chr2.4:4682826-4682845 | MS.gene85239:intron | 30.0% |
!! | TCGATAAGTGTCTGAAATTT+TGG | - | chr2.4:4687030-4687049 | None:intergenic | 30.0% |
!!! | AAGCTAATTTTTTCTCCCTT+TGG | + | chr2.4:4682941-4682960 | MS.gene85239:intron | 30.0% |
!!! | AATTTTTTCTCCCTTTGGAA+GGG | + | chr2.4:4682946-4682965 | MS.gene85239:intron | 30.0% |
!!! | AGAGGGGAAATTTTAATTGA+AGG | - | chr2.4:4683070-4683089 | None:intergenic | 30.0% |
!!! | GAGATCTTGTTCATTTTTTG+AGG | + | chr2.4:4682891-4682910 | MS.gene85239:intron | 30.0% |
!!! | GATCTTGTTCATTTTTTGAG+GGG | + | chr2.4:4682893-4682912 | MS.gene85239:intron | 30.0% |
!!! | TAATTTTTTCTCCCTTTGGA+AGG | + | chr2.4:4682945-4682964 | MS.gene85239:intron | 30.0% |
!!! | TCTGTCTTATTTTCTTGAGT+GGG | - | chr2.4:4683625-4683644 | None:intergenic | 30.0% |
AAACTGGACATCAGATACAA+GGG | + | chr2.4:4687119-4687138 | MS.gene85239:CDS | 35.0% | |
AAGATTACAGACTCTAATGC+TGG | - | chr2.4:4685006-4685025 | None:intergenic | 35.0% | |
AAGTAGATGCTTCCATGATT+TGG | - | chr2.4:4684259-4684278 | None:intergenic | 35.0% | |
AAGTTTGCACTACTGTCATA+TGG | + | chr2.4:4686839-4686858 | MS.gene85239:CDS | 35.0% | |
AATTACCTCGTTACCAACAT+TGG | + | chr2.4:4684105-4684124 | MS.gene85239:CDS | 35.0% | |
AATTGTTGAAACTGTTCGGT+CGG | + | chr2.4:4682235-4682254 | MS.gene85239:intron | 35.0% | |
AATTTAAGAGGAGATGGAAC+AGG | + | chr2.4:4684576-4684595 | MS.gene85239:CDS | 35.0% | |
ACTTTAAGCCATAAATCACG+AGG | + | chr2.4:4684467-4684486 | MS.gene85239:intron | 35.0% | |
AGATTACAGACTCTAATGCT+GGG | - | chr2.4:4685005-4685024 | None:intergenic | 35.0% | |
ATAGTAGTGCATATGTTCCA+AGG | - | chr2.4:4682052-4682071 | None:intergenic | 35.0% | |
ATATCTTCCTAGTGAAACAC+CGG | + | chr2.4:4684518-4684537 | MS.gene85239:CDS | 35.0% | |
ATCTTGCTAAGTACATCTGT+TGG | - | chr2.4:4685105-4685124 | None:intergenic | 35.0% | |
ATGAATATCCTTATCCTCGT+AGG | + | chr2.4:4684703-4684722 | MS.gene85239:CDS | 35.0% | |
ATGAATCTCCTACTAAGAGT+TGG | - | chr2.4:4686934-4686953 | None:intergenic | 35.0% | |
ATTACCTCGTTACCAACATT+GGG | + | chr2.4:4684106-4684125 | MS.gene85239:CDS | 35.0% | |
ATTAGTGCAACTAAACCTGA+TGG | + | chr2.4:4681048-4681067 | MS.gene85239:CDS | 35.0% | |
ATTTAGAGGAATGGCAATTG+AGG | + | chr2.4:4686567-4686586 | MS.gene85239:intron | 35.0% | |
ATTTCTTTGAGCACAGGTAA+TGG | - | chr2.4:4685132-4685151 | None:intergenic | 35.0% | |
CACCTAGAACCTAATTTAGA+AGG | + | chr2.4:4685633-4685652 | MS.gene85239:CDS | 35.0% | |
CACTCAAGAAAATAAGACAG+AGG | + | chr2.4:4683624-4683643 | MS.gene85239:intron | 35.0% | |
CCAATTCTTCTTCTCTGTAA+TGG | - | chr2.4:4684554-4684573 | None:intergenic | 35.0% | |
CCATTACAGAGAAGAAGAAT+TGG | + | chr2.4:4684551-4684570 | MS.gene85239:CDS | 35.0% | |
CCCAAAACTACTTACACTTT+AGG | + | chr2.4:4683524-4683543 | MS.gene85239:intron | 35.0% | |
CTAATCCATCATGAGCATAA+GGG | - | chr2.4:4686636-4686655 | None:intergenic | 35.0% | |
CTGTTAGTTGCTATGACAAA+TGG | - | chr2.4:4686197-4686216 | None:intergenic | 35.0% | |
CTTCATGAAGGATCATTGTT+TGG | + | chr2.4:4685532-4685551 | MS.gene85239:intron | 35.0% | |
CTTCCATAAATGTGTGGAAT+TGG | - | chr2.4:4683681-4683700 | None:intergenic | 35.0% | |
CTTGAAGACATTCCAAATCA+TGG | + | chr2.4:4684244-4684263 | MS.gene85239:CDS | 35.0% | |
GAAAGCAGTATCTCAAAATG+TGG | + | chr2.4:4684978-4684997 | MS.gene85239:CDS | 35.0% | |
GAAGGATGAAGCAAAGTATA+AGG | - | chr2.4:4687255-4687274 | None:intergenic | 35.0% | |
GATTGATGTCATTAGTTCGA+TGG | + | chr2.4:4685499-4685518 | MS.gene85239:intron | 35.0% | |
GGGTCATAAGATAAAAGGAA+CGG | + | chr2.4:4680885-4680904 | MS.gene85239:CDS | 35.0% | |
GGTAATTATACCTTCCAGAA+AGG | - | chr2.4:4684092-4684111 | None:intergenic | 35.0% | |
GTCAGTTAAGTTAGAACTTG+TGG | - | chr2.4:4682212-4682231 | None:intergenic | 35.0% | |
GTGTTTGGCATTATAAATCC+AGG | - | chr2.4:4684293-4684312 | None:intergenic | 35.0% | |
TCAACTGAAGAGAAACAGAA+CGG | - | chr2.4:4681029-4681048 | None:intergenic | 35.0% | |
TCACCAATTCCACACATTTA+TGG | + | chr2.4:4683675-4683694 | MS.gene85239:intron | 35.0% | |
TCATAAGATAAAAGGAACGG+TGG | + | chr2.4:4680888-4680907 | MS.gene85239:CDS | 35.0% | |
TCTAATCCATCATGAGCATA+AGG | - | chr2.4:4686637-4686656 | None:intergenic | 35.0% | |
TGAATATCCTTATCCTCGTA+GGG | + | chr2.4:4684704-4684723 | MS.gene85239:CDS | 35.0% | |
TGACAGTACTATTTGGTTAC+TGG | + | chr2.4:4686007-4686026 | MS.gene85239:CDS | 35.0% | |
TGCCTGCTGATCTTATAAAA+AGG | + | chr2.4:4686411-4686430 | MS.gene85239:CDS | 35.0% | |
TTATATATAACCAGTGACGG+AGG | + | chr2.4:4681591-4681610 | MS.gene85239:intron | 35.0% | |
TTCATTGTATCACGATAGTG+AGG | - | chr2.4:4686260-4686279 | None:intergenic | 35.0% | |
TTCTTGATGTAAAATGCTCC+AGG | - | chr2.4:4684187-4684206 | None:intergenic | 35.0% | |
TTGTCTAAGTATGTCATCTG+TGG | - | chr2.4:4686713-4686732 | None:intergenic | 35.0% | |
TTTAGTATACTTTGGTGGGA+AGG | - | chr2.4:4683195-4683214 | None:intergenic | 35.0% | |
TTTGAATGGGATGATGACAT+GGG | + | chr2.4:4684157-4684176 | MS.gene85239:CDS | 35.0% | |
! | AAAGTATAAGGCATCTGAAC+CGG | - | chr2.4:4687243-4687262 | None:intergenic | 35.0% |
! | AATAGTTTAACCAGTGTTGG+TGG | + | chr2.4:4680940-4680959 | MS.gene85239:CDS | 35.0% |
! | ATACCTTGAAGTACTTTAGG+TGG | - | chr2.4:4685192-4685211 | None:intergenic | 35.0% |
! | ATCTTTGTTATATACAGGGG+CGG | - | chr2.4:4682484-4682503 | None:intergenic | 35.0% |
! | CCTTGTTTGCAAAGAAAATG+CGG | - | chr2.4:4684327-4684346 | None:intergenic | 35.0% |
! | CTTCATGCAGCTGTTAATTT+TGG | + | chr2.4:4686874-4686893 | MS.gene85239:CDS | 35.0% |
! | GAAGTTCATGGATTGTATGA+GGG | + | chr2.4:4685066-4685085 | MS.gene85239:CDS | 35.0% |
! | GTCATTAGTTCGATGGATTT+GGG | + | chr2.4:4685506-4685525 | MS.gene85239:intron | 35.0% |
! | TACTATTTGGTTACTGGCTA+AGG | + | chr2.4:4686013-4686032 | MS.gene85239:CDS | 35.0% |
! | TGAAGTTCATGGATTGTATG+AGG | + | chr2.4:4685065-4685084 | MS.gene85239:CDS | 35.0% |
! | TGTCATTAGTTCGATGGATT+TGG | + | chr2.4:4685505-4685524 | MS.gene85239:intron | 35.0% |
! | TTAGAGGCCTTTAAGAAGTT+TGG | + | chr2.4:4687144-4687163 | MS.gene85239:CDS | 35.0% |
! | TTTTGAATGGGATGATGACA+TGG | + | chr2.4:4684156-4684175 | MS.gene85239:CDS | 35.0% |
! | TTTTGTCACTGCTCAAGAAA+AGG | - | chr2.4:4685890-4685909 | None:intergenic | 35.0% |
!! | AAGGTGTTGACAGTACTATT+TGG | + | chr2.4:4686000-4686019 | MS.gene85239:CDS | 35.0% |
!! | ATTAGGTTCTAGGTGTTCTT+TGG | - | chr2.4:4685628-4685647 | None:intergenic | 35.0% |
!! | GAAATGAAGAAAGTACCATC+AGG | - | chr2.4:4681066-4681085 | None:intergenic | 35.0% |
!! | GAGATCCAAAAGCACTTAAT+AGG | - | chr2.4:4685263-4685282 | None:intergenic | 35.0% |
!! | GATAGCTTTGATGAAGTTCA+TGG | + | chr2.4:4685054-4685073 | MS.gene85239:CDS | 35.0% |
!! | GATCCAAAAGCACTTAATAG+GGG | - | chr2.4:4685261-4685280 | None:intergenic | 35.0% |
!! | GGAGAAGAATTTTAATGGTG+GGG | - | chr2.4:4683141-4683160 | None:intergenic | 35.0% |
!! | GTTGATGAGAAAGAACGTTT+TGG | + | chr2.4:4680912-4680931 | MS.gene85239:CDS | 35.0% |
!! | TCTTCTCTGTAATGGACTAA+TGG | - | chr2.4:4684546-4684565 | None:intergenic | 35.0% |
!! | TGATTTGTGTTTGGGTTGAT+AGG | - | chr2.4:4683095-4683114 | None:intergenic | 35.0% |
!!! | ATTTTTTCTCCCTTTGGAAG+GGG | + | chr2.4:4682947-4682966 | MS.gene85239:intron | 35.0% |
!!! | CTCTGTCTTATTTTCTTGAG+TGG | - | chr2.4:4683626-4683645 | None:intergenic | 35.0% |
!!! | CTTGAGTTGAGACTTTTTTG+AGG | + | chr2.4:4682979-4682998 | MS.gene85239:intron | 35.0% |
AAATGTGATCTGCTGTCTTC+AGG | + | chr2.4:4685397-4685416 | MS.gene85239:CDS | 40.0% | |
AACCAACACTTGCCTAATTG+GGG | - | chr2.4:4681730-4681749 | None:intergenic | 40.0% | |
AAGATTCTGAACTCCAAGCT+TGG | + | chr2.4:4686731-4686750 | MS.gene85239:CDS | 40.0% | |
AAGCTAGATAGCCAAGTCTA+TGG | + | chr2.4:4685582-4685601 | MS.gene85239:CDS | 40.0% | |
AATAAACTCGACTCCAACGA+AGG | + | chr2.4:4685845-4685864 | MS.gene85239:CDS | 40.0% | |
AATATCCTTATCCTCGTAGG+GGG | + | chr2.4:4684706-4684725 | MS.gene85239:CDS | 40.0% | |
ACTGTGAGCCCTTCTAAATT+AGG | - | chr2.4:4685645-4685664 | None:intergenic | 40.0% | |
ACTTTATGAGTGTCAAACGG+AGG | + | chr2.4:4681337-4681356 | MS.gene85239:intron | 40.0% | |
AGAAAATGCGGTCAAGTTTG+TGG | - | chr2.4:4684315-4684334 | None:intergenic | 40.0% | |
AGTACAAGGAGACATAGTCT+TGG | - | chr2.4:4686687-4686706 | None:intergenic | 40.0% | |
ATCATCAACTTGTCAGCCAT+TGG | + | chr2.4:4686063-4686082 | MS.gene85239:CDS | 40.0% | |
ATCTCCTACTAAGAGTTGGA+CGG | - | chr2.4:4686930-4686949 | None:intergenic | 40.0% | |
CAAAAACTTCCCCTTCCAAA+GGG | - | chr2.4:4682959-4682978 | None:intergenic | 40.0% | |
CAAACTGGACATCAGATACA+AGG | + | chr2.4:4687118-4687137 | MS.gene85239:CDS | 40.0% | |
CAGATCCTAAAAGTGAGAGT+AGG | + | chr2.4:4684881-4684900 | MS.gene85239:intron | 40.0% | |
CATTTACCCTAAGAACCAGA+GGG | - | chr2.4:4681765-4681784 | None:intergenic | 40.0% | |
CTTCAAGAGTCAAACTCACA+AGG | - | chr2.4:4684231-4684250 | None:intergenic | 40.0% | |
CTTGTATCTGATGTCCAGTT+TGG | - | chr2.4:4687120-4687139 | None:intergenic | 40.0% | |
CTTTATGAGTGTCAAACGGA+GGG | + | chr2.4:4681338-4681357 | MS.gene85239:intron | 40.0% | |
GAACCAACACTTGCCTAATT+GGG | - | chr2.4:4681731-4681750 | None:intergenic | 40.0% | |
GAATATCCTTATCCTCGTAG+GGG | + | chr2.4:4684705-4684724 | MS.gene85239:CDS | 40.0% | |
GATTACCCTTATGCTCATGA+TGG | + | chr2.4:4686628-4686647 | MS.gene85239:CDS | 40.0% | |
GATTTAGGAAATCCGGAGAA+AGG | + | chr2.4:4684645-4684664 | MS.gene85239:CDS | 40.0% | |
GCCCTTCTAAATTAGGTTCT+AGG | - | chr2.4:4685638-4685657 | None:intergenic | 40.0% | |
GCTAGTCAAAAGTCCACAAA+AGG | + | chr2.4:4686984-4687003 | MS.gene85239:CDS | 40.0% | |
GTAGTGCTTCCATAAATGTG+TGG | - | chr2.4:4683687-4683706 | None:intergenic | 40.0% | |
GTTGTAGATGGAGGAAATTG+AGG | - | chr2.4:4681309-4681328 | None:intergenic | 40.0% | |
TAAACCGTCCAACTCTTAGT+AGG | + | chr2.4:4686923-4686942 | MS.gene85239:CDS | 40.0% | |
TACAAGAATTGGACTTTGCC+AGG | + | chr2.4:4686380-4686399 | MS.gene85239:CDS | 40.0% | |
TAGTGTGATCACCATAGACT+TGG | - | chr2.4:4685596-4685615 | None:intergenic | 40.0% | |
TCATTTACCCTAAGAACCAG+AGG | - | chr2.4:4681766-4681785 | None:intergenic | 40.0% | |
TCTACTTTGTATGCAACTCC+TGG | + | chr2.4:4684272-4684291 | MS.gene85239:CDS | 40.0% | |
TGAAGACAGCAGATCACATT+TGG | - | chr2.4:4685398-4685417 | None:intergenic | 40.0% | |
TGACCAAAAGCTTCATCTCT+TGG | - | chr2.4:4684925-4684944 | None:intergenic | 40.0% | |
TGCATTGAAGTATGAACCGT+CGG | - | chr2.4:4683733-4683752 | None:intergenic | 40.0% | |
TGGAAAGAACTTGTAGAGGT+TGG | + | chr2.4:4686754-4686773 | MS.gene85239:CDS | 40.0% | |
TTGGTGGAAAGAACTTGTAG+AGG | + | chr2.4:4686750-4686769 | MS.gene85239:CDS | 40.0% | |
TTTGATTAGAGGGGAGAAAG+AGG | + | chr2.4:4682835-4682854 | MS.gene85239:intron | 40.0% | |
TTTGCAAGAGAAATGCTTGC+TGG | + | chr2.4:4685365-4685384 | MS.gene85239:CDS | 40.0% | |
TTTGCTTCATCCTTCTAGTG+AGG | + | chr2.4:4687260-4687279 | MS.gene85239:CDS | 40.0% | |
TTTGGACAGTATTCCTATGG+TGG | + | chr2.4:4686892-4686911 | MS.gene85239:CDS | 40.0% | |
TTTGTGGGGAAGATATTCCA+TGG | + | chr2.4:4686340-4686359 | MS.gene85239:CDS | 40.0% | |
! | ACCATTTGGTGGACAACTTA+TGG | - | chr2.4:4681271-4681290 | None:intergenic | 40.0% |
! | AGCCAGGAATTTAAAGTCAG+GGG | - | chr2.4:4682461-4682480 | None:intergenic | 40.0% |
! | ATGCCCCTATTAAGTGCTTT+TGG | + | chr2.4:4685255-4685274 | MS.gene85239:intron | 40.0% |
! | CCATTTGGTGGACAACTTAT+GGG | - | chr2.4:4681270-4681289 | None:intergenic | 40.0% |
! | CCGCATTTTCTTTGCAAACA+AGG | + | chr2.4:4684324-4684343 | MS.gene85239:CDS | 40.0% |
! | CGTCATATAATTTGAGACGG+AGG | - | chr2.4:4683243-4683262 | None:intergenic | 40.0% |
! | CTTCCAAGAGATGAAGCTTT+TGG | + | chr2.4:4684919-4684938 | MS.gene85239:CDS | 40.0% |
! | GAGCCAGGAATTTAAAGTCA+GGG | - | chr2.4:4682462-4682481 | None:intergenic | 40.0% |
! | GCATCATTTTCTTACGGACT+TGG | - | chr2.4:4683877-4683896 | None:intergenic | 40.0% |
! | GCATGATTTTCACCTTTCTC+CGG | - | chr2.4:4684660-4684679 | None:intergenic | 40.0% |
! | GTCTTCAAGTATGCCTTTTG+TGG | - | chr2.4:4687000-4687019 | None:intergenic | 40.0% |
!! | ATCAGATACAAGGGCATTAG+AGG | + | chr2.4:4687128-4687147 | MS.gene85239:CDS | 40.0% |
!! | GAAGAATTTTAATGGTGGGG+AGG | - | chr2.4:4683138-4683157 | None:intergenic | 40.0% |
!! | GAGGAAGGACTTACTTTTAG+AGG | + | chr2.4:4687279-4687298 | MS.gene85239:CDS | 40.0% |
!! | GTTCGTTTTTGTTAACCCTC+TGG | + | chr2.4:4681747-4681766 | MS.gene85239:intron | 40.0% |
!! | GTTTGGGTTGATAGGATAGA+GGG | - | chr2.4:4683087-4683106 | None:intergenic | 40.0% |
!! | TACTTACACTTTAGGACGGA+GGG | + | chr2.4:4683532-4683551 | MS.gene85239:intron | 40.0% |
!! | TCACTCCTACTCTCACTTTT+AGG | - | chr2.4:4684889-4684908 | None:intergenic | 40.0% |
!! | TGACAAAACTTTGAAGCCAC+TGG | + | chr2.4:4685902-4685921 | MS.gene85239:CDS | 40.0% |
!! | TGTTAACCCTCTGGTTCTTA+GGG | + | chr2.4:4681756-4681775 | MS.gene85239:intron | 40.0% |
!! | TGTTTGGGTTGATAGGATAG+AGG | - | chr2.4:4683088-4683107 | None:intergenic | 40.0% |
!! | TTATGGAAGCACTACGACAA+TGG | + | chr2.4:4683692-4683711 | MS.gene85239:intron | 40.0% |
!! | TTGTTAACCCTCTGGTTCTT+AGG | + | chr2.4:4681755-4681774 | MS.gene85239:intron | 40.0% |
!! | TTTGGGTTGATAGGATAGAG+GGG | - | chr2.4:4683086-4683105 | None:intergenic | 40.0% |
!!! | TCATTTTTTGAGGGGAAGTG+AGG | + | chr2.4:4682901-4682920 | MS.gene85239:intron | 40.0% |
AAACTCAACTCTATGGCCAG+TGG | - | chr2.4:4685921-4685940 | None:intergenic | 45.0% | |
AACAGGAGAACGCAAAGAGT+GGG | + | chr2.4:4684593-4684612 | MS.gene85239:CDS | 45.0% | |
AATCATGCTCGTCCTGTTCT+TGG | + | chr2.4:4684672-4684691 | MS.gene85239:CDS | 45.0% | |
ACCAACACTTGCCTAATTGG+GGG | - | chr2.4:4681729-4681748 | None:intergenic | 45.0% | |
ACCAATAACTCCACCAACAC+TGG | - | chr2.4:4680953-4680972 | None:intergenic | 45.0% | |
ACCACAAGCTTAACACCACA+CGG | - | chr2.4:4686604-4686623 | None:intergenic | 45.0% | |
AGCACTACGACAATGGTTGT+TGG | + | chr2.4:4683699-4683718 | MS.gene85239:intron | 45.0% | |
AGGAGATTCATGCCAGAGAA+AGG | + | chr2.4:4686943-4686962 | MS.gene85239:CDS | 45.0% | |
ATAAGAAAAACGAGCCGTGG+TGG | + | chr2.4:4686785-4686804 | MS.gene85239:CDS | 45.0% | |
ATTCTGAACTCCAAGCTTGG+TGG | + | chr2.4:4686734-4686753 | MS.gene85239:CDS | 45.0% | |
CAAGTTCTTTCCACCAAGCT+TGG | - | chr2.4:4686747-4686766 | None:intergenic | 45.0% | |
CCCATAAGTTGTCCACCAAA+TGG | + | chr2.4:4681267-4681286 | MS.gene85239:intron | 45.0% | |
CGAACCAACACTTGCCTAAT+TGG | - | chr2.4:4681732-4681751 | None:intergenic | 45.0% | |
CTTCATCCTTCTAGTGAGGA+AGG | + | chr2.4:4687264-4687283 | MS.gene85239:CDS | 45.0% | |
CTTGAGGAACTGTTCACCAT+CGG | - | chr2.4:4685163-4685182 | None:intergenic | 45.0% | |
GAACAGTAAGTAGGTCTGCA+TGG | + | chr2.4:4685327-4685346 | MS.gene85239:intron | 45.0% | |
GAACTGGCAGAAAGCCAAAT+AGG | + | chr2.4:4684730-4684749 | MS.gene85239:CDS | 45.0% | |
GAGAGAGAGACAATCCAAAC+TGG | + | chr2.4:4687103-4687122 | MS.gene85239:CDS | 45.0% | |
GATGATGACATGGGAATTCC+TGG | + | chr2.4:4684166-4684185 | MS.gene85239:CDS | 45.0% | |
GATTGTCCTTCTCCCAATGT+TGG | - | chr2.4:4684121-4684140 | None:intergenic | 45.0% | |
GCAAAAACTTCCCCTTCCAA+AGG | - | chr2.4:4682960-4682979 | None:intergenic | 45.0% | |
GCAAATGGAAAAGGGAAGCT+TGG | + | chr2.4:4684058-4684077 | MS.gene85239:intron | 45.0% | |
GCTTCTGATGAAGTGTACCT+TGG | + | chr2.4:4687081-4687100 | MS.gene85239:CDS | 45.0% | |
GGAGATTCATGCCAGAGAAA+GGG | + | chr2.4:4686944-4686963 | MS.gene85239:CDS | 45.0% | |
GGCAGAAAGCCAAATAGGAA+AGG | + | chr2.4:4684735-4684754 | MS.gene85239:CDS | 45.0% | |
GGTCAAGGTTTCGACATTCT+TGG | + | chr2.4:4680970-4680989 | MS.gene85239:CDS | 45.0% | |
GTAAGTCCTTCCTCACTAGA+AGG | - | chr2.4:4687273-4687292 | None:intergenic | 45.0% | |
GTCACTGCTCAAGAAAAGGA+TGG | - | chr2.4:4685886-4685905 | None:intergenic | 45.0% | |
GTCATCTGTGGTGTAGTACA+AGG | - | chr2.4:4686701-4686720 | None:intergenic | 45.0% | |
GTCTTGGACCCATGTCTTTA+TGG | - | chr2.4:4686671-4686690 | None:intergenic | 45.0% | |
GTGTGGCAAACTCAACTCTA+TGG | - | chr2.4:4685928-4685947 | None:intergenic | 45.0% | |
GTTGTTGGATCAAGATCCGA+CGG | + | chr2.4:4683714-4683733 | MS.gene85239:intron | 45.0% | |
TATTCAGCTGACCCTTTCTC+TGG | - | chr2.4:4686958-4686977 | None:intergenic | 45.0% | |
TCCCCCTGACTTTAAATTCC+TGG | + | chr2.4:4682456-4682475 | MS.gene85239:intron | 45.0% | |
TCGTTACCAACATTGGGAGA+AGG | + | chr2.4:4684112-4684131 | MS.gene85239:CDS | 45.0% | |
TCTTCACGAGCTTGCATCTT+AGG | - | chr2.4:4686811-4686830 | None:intergenic | 45.0% | |
TGGAAAAGGGAAGCTTGGAA+AGG | + | chr2.4:4684063-4684082 | MS.gene85239:CDS | 45.0% | |
TTGAGTCATGGTGATCTAGC+AGG | - | chr2.4:4685806-4685825 | None:intergenic | 45.0% | |
TTGGATTGTCTCTCTCTCCA+AGG | - | chr2.4:4687101-4687120 | None:intergenic | 45.0% | |
TTTATGCACTCTGCGTACGT+TGG | - | chr2.4:4683828-4683847 | None:intergenic | 45.0% | |
! | ATGGGCTGCCATAAAGACAT+GGG | + | chr2.4:4686660-4686679 | MS.gene85239:CDS | 45.0% |
! | CCACCACCTAAAGTACTTCA+AGG | + | chr2.4:4685186-4685205 | MS.gene85239:CDS | 45.0% |
! | CCTTGAAGTACTTTAGGTGG+TGG | - | chr2.4:4685189-4685208 | None:intergenic | 45.0% |
! | GAACTTGTAGAGGTTGGTCA+TGG | + | chr2.4:4686760-4686779 | MS.gene85239:CDS | 45.0% |
! | GCCAGGAATTTAAAGTCAGG+GGG | - | chr2.4:4682460-4682479 | None:intergenic | 45.0% |
! | GGAGCCAGGAATTTAAAGTC+AGG | - | chr2.4:4682463-4682482 | None:intergenic | 45.0% |
! | GTGACGGGGATATTGAATAG+GGG | + | chr2.4:4680865-4680884 | MS.gene85239:CDS | 45.0% |
! | GTTCATGGATTGTATGAGGG+TGG | + | chr2.4:4685069-4685088 | MS.gene85239:CDS | 45.0% |
! | GTTGGTGGAGTTATTGGTCA+AGG | + | chr2.4:4680955-4680974 | MS.gene85239:CDS | 45.0% |
! | TATGGGCTGCCATAAAGACA+TGG | + | chr2.4:4686659-4686678 | MS.gene85239:CDS | 45.0% |
! | TGATTAACCAGGTGTCACAC+AGG | + | chr2.4:4684361-4684380 | MS.gene85239:intron | 45.0% |
! | TGGTGTTAAGCTTGTGGTAG+AGG | + | chr2.4:4686606-4686625 | MS.gene85239:CDS | 45.0% |
!! | ACCAGTGTTGGTGGAGTTAT+TGG | + | chr2.4:4680949-4680968 | MS.gene85239:CDS | 45.0% |
!! | CTACTTACACTTTAGGACGG+AGG | + | chr2.4:4683531-4683550 | MS.gene85239:intron | 45.0% |
!! | CTGTAATGGACTAATGGAGC+CGG | - | chr2.4:4684540-4684559 | None:intergenic | 45.0% |
!! | CTTTAGGTGGTGGATACTTG+AGG | - | chr2.4:4685179-4685198 | None:intergenic | 45.0% |
!! | GCTGACAAGTTGATGATAGC+AGG | - | chr2.4:4686060-4686079 | None:intergenic | 45.0% |
!! | GGTGACGGGGATATTGAATA+GGG | + | chr2.4:4680864-4680883 | MS.gene85239:CDS | 45.0% |
!! | TTCTCCCAATGTTGGTAACG+AGG | - | chr2.4:4684113-4684132 | None:intergenic | 45.0% |
!!! | AAAGATTTTATTTATTTTTT+CGG | - | chr2.4:4683170-4683189 | None:intergenic | 5.0% |
AATGGAGCCGGTGTTTCACT+AGG | - | chr2.4:4684528-4684547 | None:intergenic | 50.0% | |
ACTGTCAACACCTTCTAGCG+CGG | - | chr2.4:4685994-4686013 | None:intergenic | 50.0% | |
AGAAGGGCTCACAGTAGAAG+AGG | + | chr2.4:4685650-4685669 | MS.gene85239:CDS | 50.0% | |
ATGCTCGTCCTGTTCTTGGA+GGG | + | chr2.4:4684676-4684695 | MS.gene85239:CDS | 50.0% | |
CACAAGCTTAACACCACACG+GGG | - | chr2.4:4686602-4686621 | None:intergenic | 50.0% | |
CACCATGTTCATCTCCGTCA+GGG | - | chr2.4:4685950-4685969 | None:intergenic | 50.0% | |
CCACAAGCTTAACACCACAC+GGG | - | chr2.4:4686603-4686622 | None:intergenic | 50.0% | |
CGAGTAGCATAAGCCTTCGT+TGG | - | chr2.4:4685861-4685880 | None:intergenic | 50.0% | |
GAACAGGAGAACGCAAAGAG+TGG | + | chr2.4:4684592-4684611 | MS.gene85239:CDS | 50.0% | |
GAGAACGCAAAGAGTGGGAA+AGG | + | chr2.4:4684598-4684617 | MS.gene85239:CDS | 50.0% | |
GAGAAGCTAAGACACCGTCT+TGG | + | chr2.4:4687216-4687235 | MS.gene85239:CDS | 50.0% | |
GATACCTCCATCGTTGACCA+GGG | - | chr2.4:4686306-4686325 | None:intergenic | 50.0% | |
GCGATAAGAAAAACGAGCCG+TGG | + | chr2.4:4686782-4686801 | MS.gene85239:CDS | 50.0% | |
GCGGTCAAGTTTGTGGTGTT+TGG | - | chr2.4:4684308-4684327 | None:intergenic | 50.0% | |
GCTTGGAAAGGCTACCTTTC+TGG | + | chr2.4:4684075-4684094 | MS.gene85239:CDS | 50.0% | |
GGAAAGGCTACCTTTCTGGA+AGG | + | chr2.4:4684079-4684098 | MS.gene85239:CDS | 50.0% | |
GGATTTGGGCGACTTCATGA+AGG | + | chr2.4:4685520-4685539 | MS.gene85239:intron | 50.0% | |
GTTTATCAACCCGCGCTAGA+AGG | + | chr2.4:4685981-4686000 | MS.gene85239:CDS | 50.0% | |
TAGGCTATGGTCCCCCAATT+AGG | + | chr2.4:4681715-4681734 | MS.gene85239:intron | 50.0% | |
TCATACACCTGTGTGACACC+TGG | - | chr2.4:4684371-4684390 | None:intergenic | 50.0% | |
TCATCAGACCCTCCAAGAAC+AGG | - | chr2.4:4684687-4684706 | None:intergenic | 50.0% | |
TCCCCCAATTAGGCAAGTGT+TGG | + | chr2.4:4681725-4681744 | MS.gene85239:intron | 50.0% | |
TGAAAATGTAGGGGGGACCA+TGG | - | chr2.4:4681638-4681657 | None:intergenic | 50.0% | |
TGATACCTCCATCGTTGACC+AGG | - | chr2.4:4686307-4686326 | None:intergenic | 50.0% | |
TTAACACCACACGGGGAAGA+TGG | - | chr2.4:4686595-4686614 | None:intergenic | 50.0% | |
TTCTCTTGCTCGACAATCCC+TGG | + | chr2.4:4686286-4686305 | MS.gene85239:CDS | 50.0% | |
TTGAGTTTGCCACACCCTGA+CGG | + | chr2.4:4685933-4685952 | MS.gene85239:CDS | 50.0% | |
! | AATGGTGGGGAGGCAAATGA+AGG | - | chr2.4:4683128-4683147 | None:intergenic | 50.0% |
! | ATGGTGGGGAGGCAAATGAA+GGG | - | chr2.4:4683127-4683146 | None:intergenic | 50.0% |
!! | GGGTGACGGGGATATTGAAT+AGG | + | chr2.4:4680863-4680882 | MS.gene85239:CDS | 50.0% |
!! | TATCTAGCTTGCTTCGCGGA+GGG | - | chr2.4:4685572-4685591 | None:intergenic | 50.0% |
!! | TGGCTATCTAGCTTGCTTCG+CGG | - | chr2.4:4685576-4685595 | None:intergenic | 50.0% |
CAATCCCTGGTCAACGATGG+AGG | + | chr2.4:4686299-4686318 | MS.gene85239:CDS | 55.0% | |
CACCCTGACGGAGATGAACA+TGG | + | chr2.4:4685945-4685964 | MS.gene85239:CDS | 55.0% | |
CATGCTCGTCCTGTTCTTGG+AGG | + | chr2.4:4684675-4684694 | MS.gene85239:CDS | 55.0% | |
CGACAATCCCTGGTCAACGA+TGG | + | chr2.4:4686296-4686315 | MS.gene85239:CDS | 55.0% | |
CTGTCAACACCTTCTAGCGC+GGG | - | chr2.4:4685993-4686012 | None:intergenic | 55.0% | |
GCACCATGTTCATCTCCGTC+AGG | - | chr2.4:4685951-4685970 | None:intergenic | 55.0% | |
GCATCTGAACCGGTCCAAGA+CGG | - | chr2.4:4687233-4687252 | None:intergenic | 55.0% | |
GCTAAGACACCGTCTTGGAC+CGG | + | chr2.4:4687221-4687240 | MS.gene85239:CDS | 55.0% | |
GCTTGCATCTTAGGCCACCA+CGG | - | chr2.4:4686802-4686821 | None:intergenic | 55.0% | |
GTTCTCCCCCTACGAGGATA+AGG | - | chr2.4:4684714-4684733 | None:intergenic | 55.0% | |
TATCCTCGTAGGGGGAGAAC+TGG | + | chr2.4:4684714-4684733 | MS.gene85239:CDS | 55.0% | |
TCAGCAGGCAATGCTTGACC+TGG | - | chr2.4:4686401-4686420 | None:intergenic | 55.0% | |
TGTTCATCTCCGTCAGGGTG+TGG | - | chr2.4:4685945-4685964 | None:intergenic | 55.0% | |
TTATATACAGGGGCGGAGCC+AGG | - | chr2.4:4682477-4682496 | None:intergenic | 55.0% | |
! | ATAACCAGTGACGGAGGCAG+TGG | + | chr2.4:4681597-4681616 | MS.gene85239:intron | 55.0% |
! | CCCGTGTGGTGTTAAGCTTG+TGG | + | chr2.4:4686600-4686619 | MS.gene85239:CDS | 55.0% |
! | TAACCAGTGACGGAGGCAGT+GGG | + | chr2.4:4681598-4681617 | MS.gene85239:intron | 55.0% |
!! | CTATCTAGCTTGCTTCGCGG+AGG | - | chr2.4:4685573-4685592 | None:intergenic | 55.0% |
GAGGATCCATCTTCCCCGTG+TGG | + | chr2.4:4686586-4686605 | MS.gene85239:CDS | 60.0% | |
TCGGTCGGACGCTATGATCG+AGG | + | chr2.4:4682250-4682269 | MS.gene85239:intron | 60.0% | |
! | AACCAGTGACGGAGGCAGTG+GGG | + | chr2.4:4681599-4681618 | MS.gene85239:intron | 60.0% |
CTGCCAGTTCTCCCCCTACG+AGG | - | chr2.4:4684720-4684739 | None:intergenic | 65.0% | |
! | ACCAGTGACGGAGGCAGTGG+GGG | + | chr2.4:4681600-4681619 | MS.gene85239:intron | 65.0% |
GGGGGGACCATGGCCACCAT+TGG | - | chr2.4:4681628-4681647 | None:intergenic | 70.0% | |
! | CAGTGACGGAGGCAGTGGGG+GGG | + | chr2.4:4681602-4681621 | MS.gene85239:intron | 70.0% |
! | CCAGTGACGGAGGCAGTGGG+GGG | + | chr2.4:4681601-4681620 | MS.gene85239:intron | 70.0% |
CCCCCCACTGCCTCCGTCAC+TGG | - | chr2.4:4681604-4681623 | None:intergenic | 75.0% | |
GGAGGCAGTGGGGGGGCCAA+TGG | + | chr2.4:4681609-4681628 | MS.gene85239:intron | 75.0% | |
GGCAGTGGGGGGGCCAATGG+TGG | + | chr2.4:4681612-4681631 | MS.gene85239:intron | 75.0% | |
GGGGGGGCCAATGGTGGCCA+TGG | + | chr2.4:4681618-4681637 | MS.gene85239:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 4680853 | 4687326 | 4680853 | ID=MS.gene85239 |
chr2.4 | mRNA | 4680853 | 4687326 | 4680853 | ID=MS.gene85239.t1;Parent=MS.gene85239 |
chr2.4 | exon | 4680853 | 4681069 | 4680853 | ID=MS.gene85239.t1.exon1;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4680853 | 4681069 | 4680853 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4684059 | 4684345 | 4684059 | ID=MS.gene85239.t1.exon2;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4684059 | 4684345 | 4684059 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4684516 | 4684756 | 4684516 | ID=MS.gene85239.t1.exon3;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4684516 | 4684756 | 4684516 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4684884 | 4685207 | 4684884 | ID=MS.gene85239.t1.exon4;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4684884 | 4685207 | 4684884 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4685333 | 4685418 | 4685333 | ID=MS.gene85239.t1.exon5;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4685333 | 4685418 | 4685333 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4685564 | 4685671 | 4685564 | ID=MS.gene85239.t1.exon6;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4685564 | 4685671 | 4685564 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4685780 | 4686084 | 4685780 | ID=MS.gene85239.t1.exon7;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4685780 | 4686084 | 4685780 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4686169 | 4686432 | 4686169 | ID=MS.gene85239.t1.exon8;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4686169 | 4686432 | 4686169 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
chr2.4 | exon | 4686573 | 4687326 | 4686573 | ID=MS.gene85239.t1.exon9;Parent=MS.gene85239.t1 |
chr2.4 | CDS | 4686573 | 4687326 | 4686573 | ID=cds.MS.gene85239.t1;Parent=MS.gene85239.t1 |
Gene Sequence |
Protein sequence |