Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057008.t1 | XP_003597581.1 | 94.4 | 213 | 12 | 0 | 1 | 213 | 1 | 213 | 5.00E-113 | 417.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057008.t1 | G7IS52 | 94.4 | 213 | 12 | 0 | 1 | 213 | 1 | 213 | 3.6e-113 | 417.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057008 | MS.gene85225 | 0.843471 | 1.37E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057008.t1 | MTR_2g099820 | 93.925 | 214 | 13 | 0 | 1 | 214 | 1 | 214 | 1.72e-140 | 395 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057008.t1 | AT3G13780 | 42.534 | 221 | 120 | 4 | 1 | 214 | 14 | 234 | 4.05e-53 | 173 |
Find 48 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACAAATTGATCCTGTTAA+AGG | 0.155025 | 2.1:+4798912 | MS.gene057008:CDS |
| GAAATTCGAAATGGGTCATT+TGG | 0.296722 | 2.1:+4798785 | MS.gene057008:CDS |
| TCAAAGTTATTACCTTTAAC+AGG | 0.314979 | 2.1:-4798924 | None:intergenic |
| AAGGTTTCATTTCAAGTCAT+TGG | 0.319227 | 2.1:+4798708 | MS.gene057008:CDS |
| TCATTGGAAGAAACCCTATC+TGG | 0.338307 | 2.1:+4798724 | MS.gene057008:CDS |
| TGATCCGGAATGTGGAGAAT+TGG | 0.345241 | 2.1:+4800364 | MS.gene057008:CDS |
| TCATCCTCACTTTCTTTGCT+AGG | 0.386031 | 2.1:-4800405 | None:intergenic |
| TTGTTCTTCAAAACCCAGAT+AGG | 0.388052 | 2.1:-4798738 | None:intergenic |
| GGATCATGCCCTTTGGATAC+TGG | 0.392754 | 2.1:-4800347 | None:intergenic |
| TGTCTGCGAAAACACCCTTT+TGG | 0.394919 | 2.1:+4798829 | MS.gene057008:CDS |
| AAGGAACTTGTTGCTAAGGT+TGG | 0.407977 | 2.1:+4800522 | MS.gene057008:CDS |
| CTTCTTCAAATTGAACCAAA+AGG | 0.419549 | 2.1:-4798844 | None:intergenic |
| GATCCGGAATGTGGAGAATT+GGG | 0.436535 | 2.1:+4800365 | MS.gene057008:CDS |
| AGGAACTTGTTGCTAAGGTT+GGG | 0.441377 | 2.1:+4800523 | MS.gene057008:CDS |
| ACATTCCGGATCATGCCCTT+TGG | 0.441791 | 2.1:-4800354 | None:intergenic |
| TGAGGATAAAAGGAAAATGA+AGG | 0.453909 | 2.1:+4800437 | MS.gene057008:CDS |
| GAAATGGGTCATTTGGAACT+TGG | 0.454601 | 2.1:+4798792 | MS.gene057008:CDS |
| ACACTGTTCGGACGAGGTTG+CGG | 0.458112 | 2.1:+4798606 | MS.gene057008:CDS |
| ATGACTTGAAATGAAACCTT+AGG | 0.465906 | 2.1:-4798705 | None:intergenic |
| TTCTTCAAATTGAACCAAAA+GGG | 0.471521 | 2.1:-4798843 | None:intergenic |
| TGGTGATAGTGAAGATGATA+AGG | 0.481772 | 2.1:+4800503 | MS.gene057008:CDS |
| AATCAGACTCGTTGTTGAGT+TGG | 0.499196 | 2.1:-4798674 | None:intergenic |
| TGATAAGGAACTTGTTGCTA+AGG | 0.499728 | 2.1:+4800518 | MS.gene057008:CDS |
| TAGCAAAGAAAGTGAGGATG+AGG | 0.513147 | 2.1:+4800407 | MS.gene057008:CDS |
| AACAGCGACAAAACACTGTT+CGG | 0.516498 | 2.1:+4798594 | MS.gene057008:CDS |
| TGTTCTTCAAAACCCAGATA+GGG | 0.524313 | 2.1:-4798737 | None:intergenic |
| ACTCCCAATTCTCCACATTC+CGG | 0.528495 | 2.1:-4800368 | None:intergenic |
| AGTATCCAAAGGGCATGATC+CGG | 0.532093 | 2.1:+4800349 | MS.gene057008:CDS |
| ATGGAGTTCGAAGGCGAAGA+TGG | 0.533843 | 2.1:+4798552 | MS.gene057008:CDS |
| GTCTGATTCAGAGCCTCCTA+AGG | 0.535965 | 2.1:+4798689 | MS.gene057008:CDS |
| TTAGACCTTGCGGAGTACCT+AGG | 0.545892 | 2.1:-4800558 | None:intergenic |
| CATTGGAAGAAACCCTATCT+GGG | 0.552765 | 2.1:+4798725 | MS.gene057008:CDS |
| GACAAAACACTGTTCGGACG+AGG | 0.556592 | 2.1:+4798600 | MS.gene057008:CDS |
| GAGGATAAAAGGAAAATGAA+GGG | 0.567105 | 2.1:+4800438 | MS.gene057008:CDS |
| TTGGGAAAGGTAAGAAACCT+AGG | 0.574841 | 2.1:+4800541 | MS.gene057008:CDS |
| AACAAAGATGACGAGTGGAC+TGG | 0.577011 | 2.1:+4800483 | MS.gene057008:CDS |
| CTTGTTGCTAAGGTTGGGAA+AGG | 0.577595 | 2.1:+4800528 | MS.gene057008:CDS |
| GAGTTTGACCAGTATCCAAA+GGG | 0.590357 | 2.1:+4800339 | MS.gene057008:CDS |
| ACTTGAAATGAAACCTTAGG+AGG | 0.593531 | 2.1:-4798702 | None:intergenic |
| AAAGGGCATGATCCGGAATG+TGG | 0.603271 | 2.1:+4800356 | MS.gene057008:CDS |
| TGAGTTTGACCAGTATCCAA+AGG | 0.622122 | 2.1:+4800338 | MS.gene057008:CDS |
| GGAGCCTAGCAAAGAAAGTG+AGG | 0.635527 | 2.1:+4800401 | MS.gene057008:CDS |
| GAGACAACAAAGATGACGAG+TGG | 0.639451 | 2.1:+4800478 | MS.gene057008:CDS |
| GAATTGGGAGTGGTTTCTCG+AGG | 0.640949 | 2.1:+4800380 | MS.gene057008:CDS |
| TAATTCTGAATGGAGTTCGA+AGG | 0.641013 | 2.1:+4798543 | None:intergenic |
| GGAATGTGGAGAATTGGGAG+TGG | 0.641413 | 2.1:+4800370 | MS.gene057008:CDS |
| AGAAACCTAGGTACTCCGCA+AGG | 0.683889 | 2.1:+4800553 | MS.gene057008:CDS |
| CGTGATGACGAGAAACAGTG+TGG | 0.730657 | 2.1:-4798644 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTCATTTTCAATATA+AGG | + | chr2.1:4799655-4799674 | MS.gene057008:intron | 10.0% |
| !! | TAATTTATTTAAGTATATCC+AGG | + | chr2.1:4799266-4799285 | MS.gene057008:intron | 15.0% |
| !! | TACAAATTCCAATATTATTT+AGG | + | chr2.1:4799732-4799751 | MS.gene057008:intron | 15.0% |
| !!! | AGTTTATTTTTGTGTTAATT+TGG | + | chr2.1:4799594-4799613 | MS.gene057008:intron | 15.0% |
| !!! | TTTTAACAAAATCGATAATT+TGG | + | chr2.1:4799023-4799042 | MS.gene057008:intron | 15.0% |
| !! | AAAAATAGTTTCCATCAAAA+GGG | - | chr2.1:4798951-4798970 | None:intergenic | 20.0% |
| !! | AACTTGATCCTAAATAATAT+TGG | - | chr2.1:4799743-4799762 | None:intergenic | 20.0% |
| !! | AATAAGTTAAAAACAACTCA+TGG | - | chr2.1:4799368-4799387 | None:intergenic | 20.0% |
| !! | CTTATATATAAGCACTTATA+TGG | + | chr2.1:4799479-4799498 | MS.gene057008:intron | 20.0% |
| !! | TAGAATTATACTATCCTTAA+AGG | - | chr2.1:4799230-4799249 | None:intergenic | 20.0% |
| !! | TTAAGGATAGTATAATTCTA+AGG | + | chr2.1:4799230-4799249 | MS.gene057008:intron | 20.0% |
| !!! | ATTTTCAAGAAATTCGAAAT+GGG | + | chr2.1:4798777-4798796 | MS.gene057008:CDS | 20.0% |
| !!! | TCATTTTCAATATAAGGTAT+GGG | + | chr2.1:4799661-4799680 | MS.gene057008:intron | 20.0% |
| !!! | TTCATTTTCAATATAAGGTA+TGG | + | chr2.1:4799660-4799679 | MS.gene057008:intron | 20.0% |
| ! | AAAACAAATTCAAGCGTAAA+TGG | - | chr2.1:4800232-4800251 | None:intergenic | 25.0% |
| ! | AAAATAGTTTCCATCAAAAG+GGG | - | chr2.1:4798950-4798969 | None:intergenic | 25.0% |
| ! | AAAGTATACATGTCCTTAAA+AGG | - | chr2.1:4799637-4799656 | None:intergenic | 25.0% |
| ! | ATCATAAACTATAGTACTCA+TGG | - | chr2.1:4799570-4799589 | None:intergenic | 25.0% |
| ! | CAAAAATAGTTTCCATCAAA+AGG | - | chr2.1:4798952-4798971 | None:intergenic | 25.0% |
| ! | CAGAATAATCCCATATTTAT+AGG | - | chr2.1:4799863-4799882 | None:intergenic | 25.0% |
| ! | CGAATACTACCTATAAATAT+GGG | + | chr2.1:4799851-4799870 | MS.gene057008:intron | 25.0% |
| ! | GATGCTAATATTATAGAAGA+AGG | - | chr2.1:4799691-4799710 | None:intergenic | 25.0% |
| ! | TCAAAGTTATTACCTTTAAC+AGG | - | chr2.1:4798927-4798946 | None:intergenic | 25.0% |
| ! | TCGAATACTACCTATAAATA+TGG | + | chr2.1:4799850-4799869 | MS.gene057008:intron | 25.0% |
| ! | TTCTTCAAATTGAACCAAAA+GGG | - | chr2.1:4798846-4798865 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCTAAC+AGG | + | chr2.1:4799527-4799546 | MS.gene057008:intron | 25.0% |
| !! | CATTTTCAATATAAGGTATG+GGG | + | chr2.1:4799662-4799681 | MS.gene057008:intron | 25.0% |
| !! | CTTCATTCCTTTTGTAAATT+TGG | + | chr2.1:4799796-4799815 | MS.gene057008:intron | 25.0% |
| !! | TTAAGTTGTTTATCCTAACA+GGG | + | chr2.1:4799528-4799547 | MS.gene057008:intron | 25.0% |
| !! | TTTGAGAGTTTCTTTTGTAT+TGG | + | chr2.1:4799170-4799189 | MS.gene057008:intron | 25.0% |
| !!! | AAAAAGTGTTGAACTTTTCT+GGG | + | chr2.1:4799922-4799941 | MS.gene057008:intron | 25.0% |
| !!! | AATTTTGAAAATGCAGAGTT+TGG | + | chr2.1:4800297-4800316 | MS.gene057008:intron | 25.0% |
| !!! | CTTTCATTTTTGTTGTTTCT+CGG | + | chr2.1:4799771-4799790 | MS.gene057008:intron | 25.0% |
| !!! | GAAAAGTAAGTTTTTTTAGC+TGG | + | chr2.1:4799045-4799064 | MS.gene057008:intron | 25.0% |
| !!! | GATTTTCAAGAAATTCGAAA+TGG | + | chr2.1:4798776-4798795 | MS.gene057008:CDS | 25.0% |
| !!! | TAAAAAGTGTTGAACTTTTC+TGG | + | chr2.1:4799921-4799940 | MS.gene057008:intron | 25.0% |
| !!! | TTTTAGTTTGACTGATTCTT+AGG | + | chr2.1:4799307-4799326 | MS.gene057008:intron | 25.0% |
| AATGGAAATGAAATGGTTAC+TGG | + | chr2.1:4799951-4799970 | MS.gene057008:intron | 30.0% | |
| ACTTGAAAATCTCTTTCTCA+AGG | - | chr2.1:4799989-4800008 | None:intergenic | 30.0% | |
| AGATATCAAAGATACTAGTG+TGG | + | chr2.1:4800602-4800621 | MS.gene057008:intron | 30.0% | |
| ATGACTTGAAATGAAACCTT+AGG | - | chr2.1:4798708-4798727 | None:intergenic | 30.0% | |
| CAAGCAACCAAATTTACAAA+AGG | - | chr2.1:4799806-4799825 | None:intergenic | 30.0% | |
| CTTCTTCAAATTGAACCAAA+AGG | - | chr2.1:4798847-4798866 | None:intergenic | 30.0% | |
| GAATTTGTAACCAACTAAAG+AGG | - | chr2.1:4799721-4799740 | None:intergenic | 30.0% | |
| GAGGATAAAAGGAAAATGAA+GGG | + | chr2.1:4800438-4800457 | MS.gene057008:CDS | 30.0% | |
| GGTTAGAAATGGAAATGAAA+TGG | + | chr2.1:4799944-4799963 | MS.gene057008:intron | 30.0% | |
| GTATATTTGTGTAGCCTTTA+AGG | + | chr2.1:4799213-4799232 | MS.gene057008:intron | 30.0% | |
| GTATCTTTGATATCTCTCTT+AGG | - | chr2.1:4800597-4800616 | None:intergenic | 30.0% | |
| TCACAAATTGATCCTGTTAA+AGG | + | chr2.1:4798912-4798931 | MS.gene057008:CDS | 30.0% | |
| TGAATTATACTACCCTTAGA+AGG | - | chr2.1:4800160-4800179 | None:intergenic | 30.0% | |
| TGAGGATAAAAGGAAAATGA+AGG | + | chr2.1:4800437-4800456 | MS.gene057008:CDS | 30.0% | |
| ! | AAGGTTTCATTTCAAGTCAT+TGG | + | chr2.1:4798708-4798727 | MS.gene057008:CDS | 30.0% |
| ! | AATTCACAGTGATAGCTTTT+AGG | + | chr2.1:4800255-4800274 | MS.gene057008:intron | 30.0% |
| ! | CTTTTGTAAATTTGGTTGCT+TGG | + | chr2.1:4799804-4799823 | MS.gene057008:intron | 30.0% |
| !! | AGGATGATTTTGAGGATAAA+AGG | + | chr2.1:4800427-4800446 | MS.gene057008:CDS | 30.0% |
| !! | ATAATTCTAAGGCTCTTGTT+TGG | + | chr2.1:4799241-4799260 | MS.gene057008:intron | 30.0% |
| !! | GCTGTTTTGTAAAGAGAATT+TGG | - | chr2.1:4798580-4798599 | None:intergenic | 30.0% |
| !! | GTTAGCTTAATAGCCTTTTA+AGG | + | chr2.1:4799621-4799640 | MS.gene057008:intron | 30.0% |
| !!! | AAAAGTGTTGAACTTTTCTG+GGG | + | chr2.1:4799923-4799942 | MS.gene057008:intron | 30.0% |
| !!! | AGTTTGGTTTTCTTGTTATG+AGG | + | chr2.1:4800313-4800332 | MS.gene057008:CDS | 30.0% |
| !!! | TGTCTTTTGAAATTGAGTGT+GGG | + | chr2.1:4799898-4799917 | MS.gene057008:intron | 30.0% |
| !!! | TTGTCTTTTGAAATTGAGTG+TGG | + | chr2.1:4799897-4799916 | MS.gene057008:intron | 30.0% |
| AAACAATGACAATGAGGATG+AGG | + | chr2.1:4800710-4800729 | MS.gene057008:intron | 35.0% | |
| AATCTCTTTCTCAAGGAATG+TGG | - | chr2.1:4799982-4800001 | None:intergenic | 35.0% | |
| ACTTGAAATGAAACCTTAGG+AGG | - | chr2.1:4798705-4798724 | None:intergenic | 35.0% | |
| CACTACATATCAACATCACA+AGG | - | chr2.1:4800835-4800854 | None:intergenic | 35.0% | |
| GAAATTCGAAATGGGTCATT+TGG | + | chr2.1:4798785-4798804 | MS.gene057008:CDS | 35.0% | |
| GGAACAAAACAATGACAATG+AGG | + | chr2.1:4800704-4800723 | MS.gene057008:intron | 35.0% | |
| GTTTAGCATTGTTCACTTGA+TGG | + | chr2.1:4800185-4800204 | MS.gene057008:intron | 35.0% | |
| TCCTGCTAAGAAAATGTCAT+TGG | - | chr2.1:4799111-4799130 | None:intergenic | 35.0% | |
| TCTATTGTCTTTAGACCTTG+CGG | - | chr2.1:4800571-4800590 | None:intergenic | 35.0% | |
| TGCTGAATTCATGTCAACAA+TGG | + | chr2.1:4800026-4800045 | MS.gene057008:intron | 35.0% | |
| TGTTACTGATGAAGAAGATG+AGG | + | chr2.1:4800677-4800696 | MS.gene057008:intron | 35.0% | |
| TGTTCTTCAAAACCCAGATA+GGG | - | chr2.1:4798740-4798759 | None:intergenic | 35.0% | |
| TTATATCTTGCAAGTGTCTG+TGG | + | chr2.1:4800126-4800145 | MS.gene057008:intron | 35.0% | |
| TTGTTCTTCAAAACCCAGAT+AGG | - | chr2.1:4798741-4798760 | None:intergenic | 35.0% | |
| ! | ATAACTTTGACCCCTTTTGA+TGG | + | chr2.1:4798937-4798956 | MS.gene057008:intron | 35.0% |
| ! | CTCATGGTTGACTTAGATTT+AGG | - | chr2.1:4799554-4799573 | None:intergenic | 35.0% |
| ! | GGATATGAGTTGCAAGTTTT+AGG | + | chr2.1:4799191-4799210 | MS.gene057008:intron | 35.0% |
| ! | TGGTGATAGTGAAGATGATA+AGG | + | chr2.1:4800503-4800522 | MS.gene057008:CDS | 35.0% |
| ! | TTTTCGCAGACAAGCAAAAT+CGG | - | chr2.1:4798821-4798840 | None:intergenic | 35.0% |
| !! | TGATAAGGAACTTGTTGCTA+AGG | + | chr2.1:4800518-4800537 | MS.gene057008:CDS | 35.0% |
| !!! | AACTTTTCTGGGGTTAGAAA+TGG | + | chr2.1:4799933-4799952 | MS.gene057008:intron | 35.0% |
| AACAGCGACAAAACACTGTT+CGG | + | chr2.1:4798594-4798613 | MS.gene057008:CDS | 40.0% | |
| AACCAACTAAAGAGGAAAGC+AGG | - | chr2.1:4799713-4799732 | None:intergenic | 40.0% | |
| AATCAGACTCGTTGTTGAGT+TGG | - | chr2.1:4798677-4798696 | None:intergenic | 40.0% | |
| ACTTAGATTTAGGCCCTGTT+AGG | - | chr2.1:4799544-4799563 | None:intergenic | 40.0% | |
| ATATCAACATCACAAGGCCA+CGG | - | chr2.1:4800829-4800848 | None:intergenic | 40.0% | |
| ATCCTGCTTTCCTCTTTAGT+TGG | + | chr2.1:4799708-4799727 | MS.gene057008:intron | 40.0% | |
| CATTGGAAGAAACCCTATCT+GGG | + | chr2.1:4798725-4798744 | MS.gene057008:CDS | 40.0% | |
| GAGTTTGACCAGTATCCAAA+GGG | + | chr2.1:4800339-4800358 | MS.gene057008:CDS | 40.0% | |
| GCAAGGTCTAAAGACAATAG+AGG | + | chr2.1:4800570-4800589 | MS.gene057008:intron | 40.0% | |
| TAGCAAAGAAAGTGAGGATG+AGG | + | chr2.1:4800407-4800426 | MS.gene057008:CDS | 40.0% | |
| TCATCCTCACTTTCTTTGCT+AGG | - | chr2.1:4800408-4800427 | None:intergenic | 40.0% | |
| TCATTGGAAGAAACCCTATC+TGG | + | chr2.1:4798724-4798743 | MS.gene057008:CDS | 40.0% | |
| TGAGTTTGACCAGTATCCAA+AGG | + | chr2.1:4800338-4800357 | MS.gene057008:CDS | 40.0% | |
| TGATGAAGAAGATGAGGATG+AGG | + | chr2.1:4800683-4800702 | MS.gene057008:intron | 40.0% | |
| TTGGGAAAGGTAAGAAACCT+AGG | + | chr2.1:4800541-4800560 | MS.gene057008:CDS | 40.0% | |
| ! | GAAATGGGTCATTTGGAACT+TGG | + | chr2.1:4798792-4798811 | MS.gene057008:CDS | 40.0% |
| ! | GCCAATGACATTTTCTTAGC+AGG | + | chr2.1:4799107-4799126 | MS.gene057008:intron | 40.0% |
| ! | TGAGGATGAGGATGATTTTG+AGG | + | chr2.1:4800419-4800438 | MS.gene057008:CDS | 40.0% |
| !! | AAGGAACTTGTTGCTAAGGT+TGG | + | chr2.1:4800522-4800541 | MS.gene057008:CDS | 40.0% |
| !! | AGGAACTTGTTGCTAAGGTT+GGG | + | chr2.1:4800523-4800542 | MS.gene057008:CDS | 40.0% |
| !! | GCTATTTTCACAAGCTAGCA+TGG | - | chr2.1:4799403-4799422 | None:intergenic | 40.0% |
| !! | GCTATTTTCACAAGCTATCC+TGG | - | chr2.1:4799287-4799306 | None:intergenic | 40.0% |
| AACAAAGATGACGAGTGGAC+TGG | + | chr2.1:4800483-4800502 | MS.gene057008:CDS | 45.0% | |
| ACTCCCAATTCTCCACATTC+CGG | - | chr2.1:4800371-4800390 | None:intergenic | 45.0% | |
| AGAAGATGACGATGATGCTG+TGG | + | chr2.1:4800755-4800774 | MS.gene057008:intron | 45.0% | |
| CTTGTTGCTAAGGTTGGGAA+AGG | + | chr2.1:4800528-4800547 | MS.gene057008:CDS | 45.0% | |
| GAGACAACAAAGATGACGAG+TGG | + | chr2.1:4800478-4800497 | MS.gene057008:CDS | 45.0% | |
| GATCCGGAATGTGGAGAATT+GGG | + | chr2.1:4800365-4800384 | MS.gene057008:CDS | 45.0% | |
| GTGGCTGTGTAACCTTCTAA+GGG | + | chr2.1:4800145-4800164 | MS.gene057008:intron | 45.0% | |
| TGACAATGAGGATGAGGAAG+AGG | + | chr2.1:4800716-4800735 | MS.gene057008:intron | 45.0% | |
| TGATCCGGAATGTGGAGAAT+TGG | + | chr2.1:4800364-4800383 | MS.gene057008:CDS | 45.0% | |
| TGTGGCTGTGTAACCTTCTA+AGG | + | chr2.1:4800144-4800163 | MS.gene057008:intron | 45.0% | |
| ! | AGTATCCAAAGGGCATGATC+CGG | + | chr2.1:4800349-4800368 | MS.gene057008:CDS | 45.0% |
| ! | TGTCTGCGAAAACACCCTTT+TGG | + | chr2.1:4798829-4798848 | MS.gene057008:CDS | 45.0% |
| ! | TGTTTAGATACCAAGTGCCG+TGG | + | chr2.1:4800809-4800828 | MS.gene057008:intron | 45.0% |
| ACATTCCGGATCATGCCCTT+TGG | - | chr2.1:4800357-4800376 | None:intergenic | 50.0% | |
| AGAAACCTAGGTACTCCGCA+AGG | + | chr2.1:4800553-4800572 | MS.gene057008:CDS | 50.0% | |
| AGATGACGATGATGCTGTGG+CGG | + | chr2.1:4800758-4800777 | MS.gene057008:intron | 50.0% | |
| ATGGAGTTCGAAGGCGAAGA+TGG | + | chr2.1:4798552-4798571 | MS.gene057008:CDS | 50.0% | |
| CAATGAGGATGAGGAAGAGG+AGG | + | chr2.1:4800719-4800738 | MS.gene057008:intron | 50.0% | |
| GAATTGGGAGTGGTTTCTCG+AGG | + | chr2.1:4800380-4800399 | MS.gene057008:CDS | 50.0% | |
| GACAAAACACTGTTCGGACG+AGG | + | chr2.1:4798600-4798619 | MS.gene057008:CDS | 50.0% | |
| GATGACGATGATGAGACGCT+AGG | + | chr2.1:4800645-4800664 | MS.gene057008:intron | 50.0% | |
| GGAATGTGGAGAATTGGGAG+TGG | + | chr2.1:4800370-4800389 | MS.gene057008:CDS | 50.0% | |
| GGAGCCTAGCAAAGAAAGTG+AGG | + | chr2.1:4800401-4800420 | MS.gene057008:CDS | 50.0% | |
| GGATCATGCCCTTTGGATAC+TGG | - | chr2.1:4800350-4800369 | None:intergenic | 50.0% | |
| GTCTGATTCAGAGCCTCCTA+AGG | + | chr2.1:4798689-4798708 | MS.gene057008:CDS | 50.0% | |
| ! | AAAGGGCATGATCCGGAATG+TGG | + | chr2.1:4800356-4800375 | MS.gene057008:CDS | 50.0% |
| ! | CGTGATGACGAGAAACAGTG+TGG | - | chr2.1:4798647-4798666 | None:intergenic | 50.0% |
| ! | CTGTGGCGGGGTAAAATCAA+GGG | + | chr2.1:4800772-4800791 | MS.gene057008:intron | 50.0% |
| ! | TGTGGCGGGGTAAAATCAAG+GGG | + | chr2.1:4800773-4800792 | MS.gene057008:intron | 50.0% |
| ! | TTAGACCTTGCGGAGTACCT+AGG | - | chr2.1:4800561-4800580 | None:intergenic | 50.0% |
| ACACTGTTCGGACGAGGTTG+CGG | + | chr2.1:4798606-4798625 | MS.gene057008:CDS | 55.0% | |
| ATGACGATGATGCTGTGGCG+GGG | + | chr2.1:4800760-4800779 | MS.gene057008:intron | 55.0% | |
| GACGATGATGAGACGCTAGG+AGG | + | chr2.1:4800648-4800667 | MS.gene057008:intron | 55.0% | |
| GATGACGATGATGCTGTGGC+GGG | + | chr2.1:4800759-4800778 | MS.gene057008:intron | 55.0% | |
| TGAGGATGAGGAAGAGGAGG+AGG | + | chr2.1:4800722-4800741 | MS.gene057008:intron | 55.0% | |
| ! | GCTGTGGCGGGGTAAAATCA+AGG | + | chr2.1:4800771-4800790 | MS.gene057008:intron | 55.0% |
| ! | GTGGCGGGGTAAAATCAAGG+GGG | + | chr2.1:4800774-4800793 | MS.gene057008:intron | 55.0% |
| CATCACAAGGCCACGGCACT+TGG | - | chr2.1:4800822-4800841 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 4798552 | 4800886 | 4798552 | ID=MS.gene057008 |
| chr2.1 | mRNA | 4798552 | 4800886 | 4798552 | ID=MS.gene057008.t1;Parent=MS.gene057008 |
| chr2.1 | exon | 4798552 | 4798933 | 4798552 | ID=MS.gene057008.t1.exon1;Parent=MS.gene057008.t1 |
| chr2.1 | CDS | 4798552 | 4798933 | 4798552 | ID=cds.MS.gene057008.t1;Parent=MS.gene057008.t1 |
| chr2.1 | exon | 4800313 | 4800574 | 4800313 | ID=MS.gene057008.t1.exon2;Parent=MS.gene057008.t1 |
| chr2.1 | CDS | 4800313 | 4800574 | 4800313 | ID=cds.MS.gene057008.t1;Parent=MS.gene057008.t1 |
| chr2.1 | exon | 4800853 | 4800886 | 4800853 | ID=MS.gene057008.t1.exon3;Parent=MS.gene057008.t1 |
| chr2.1 | CDS | 4800853 | 4800886 | 4800853 | ID=cds.MS.gene057008.t1;Parent=MS.gene057008.t1 |
| Gene Sequence |
| Protein sequence |