Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057024.t1 | XP_003597607.2 | 93.2 | 292 | 16 | 1 | 1 | 288 | 23 | 314 | 8.90E-131 | 476.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057024.t1 | G7IUI6 | 93.2 | 292 | 16 | 1 | 1 | 288 | 1 | 292 | 6.4e-131 | 476.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057024 | MS.gene063637 | 0.81233 | 4.48E-51 | -1.69E-46 |
| MS.gene057024 | MS.gene21149 | 0.812593 | 3.92E-51 | -1.69E-46 |
| MS.gene057024 | MS.gene49386 | 0.814011 | 1.91E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057024.t1 | MTR_2g100100 | 93.493 | 292 | 15 | 1 | 1 | 288 | 1 | 292 | 7.70e-175 | 484 |
| MS.gene057024.t1 | MTR_8g016260 | 53.704 | 270 | 78 | 5 | 44 | 288 | 36 | 283 | 1.38e-81 | 248 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057024.t1 | AT1G17665 | 51.838 | 272 | 104 | 3 | 37 | 286 | 70 | 336 | 2.13e-79 | 244 |
Find 45 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAATGGGTCGGGCTAAT+TGG | 0.150533 | 2.1:-4595199 | None:intergenic |
| TACCCTCTGATTCCGCTAAA+TGG | 0.227484 | 2.1:+4595245 | MS.gene057024:CDS |
| GAGTGATGCAAAGAGGAAAA+TGG | 0.294497 | 2.1:-4595065 | None:intergenic |
| AAGAGAAGAAGGATTCATTT+TGG | 0.297482 | 2.1:+4598190 | MS.gene057024:CDS |
| CTGTGGCAGAGTCAATTTCT+TGG | 0.344298 | 2.1:-4595497 | None:intergenic |
| AGGTGAATTATCAGAAAGTT+TGG | 0.359477 | 2.1:-4595164 | None:intergenic |
| ACTTTCACCAGCATACAAAA+AGG | 0.378731 | 2.1:+4597895 | MS.gene057024:CDS |
| AGTGATGCAAAGAGGAAAAT+GGG | 0.392742 | 2.1:-4595064 | None:intergenic |
| GAAGAAGAAAGAAATGAATT+CGG | 0.397092 | 2.1:+4595345 | MS.gene057024:CDS |
| ATAAATGGGTCGGGCTAATT+GGG | 0.402203 | 2.1:-4595198 | None:intergenic |
| GGAACTTCCAAAGCTGAATC+CGG | 0.418164 | 2.1:-4595286 | None:intergenic |
| ATTATTAGCACAAGAGAAGA+AGG | 0.430942 | 2.1:+4598179 | MS.gene057024:CDS |
| CGACGACCCGGATTCAGCTT+TGG | 0.432908 | 2.1:+4595279 | MS.gene057024:CDS |
| ACCCTCTGATTCCGCTAAAT+GGG | 0.447906 | 2.1:+4595246 | MS.gene057024:CDS |
| TTGATGAAGATGCTTGAACT+TGG | 0.451728 | 2.1:+4598078 | MS.gene057024:intron |
| GAGAATGGTTAGAGAGAGAA+GGG | 0.453142 | 2.1:-4595089 | None:intergenic |
| TTTCGACCGACTTCATCAAC+AGG | 0.459083 | 2.1:+4597704 | MS.gene057024:CDS |
| CCTCTATTACGCAGGTTGTC+CGG | 0.459634 | 2.1:+4597206 | MS.gene057024:intron |
| GGCTACCTTGTTCGACGACC+CGG | 0.477249 | 2.1:+4595267 | MS.gene057024:CDS |
| AGTGAAGAGTGTGTGAAAAC+GGG | 0.480328 | 2.1:+4595370 | MS.gene057024:CDS |
| CAATCAAACTATTAGCAAAC+CGG | 0.483836 | 2.1:-4597225 | None:intergenic |
| ACGCTACTTGAAGAAGTAAA+CGG | 0.483883 | 2.1:-4595421 | None:intergenic |
| CTAATAGTTTGATTGATGCT+AGG | 0.486199 | 2.1:+4597233 | MS.gene057024:CDS |
| ACTTGGAGTGTGCGCGGAGA+AGG | 0.502620 | 2.1:+4598095 | MS.gene057024:CDS |
| AGAGAATGGTTAGAGAGAGA+AGG | 0.503092 | 2.1:-4595090 | None:intergenic |
| TTCAGCTTTGGAAGTTCCAT+CGG | 0.510736 | 2.1:+4595291 | MS.gene057024:CDS |
| AAGTGAAGAGTGTGTGAAAA+CGG | 0.519250 | 2.1:+4595369 | MS.gene057024:CDS |
| AACAAAGGCTTTACTATGCA+AGG | 0.521350 | 2.1:+4597668 | MS.gene057024:CDS |
| TGAATCCGGGTCGTCGAACA+AGG | 0.521933 | 2.1:-4595272 | None:intergenic |
| CTAATTGGGTCGGGTTGTGA+AGG | 0.532398 | 2.1:-4595184 | None:intergenic |
| TGGGTCGGGCTAATTGGGTC+GGG | 0.547188 | 2.1:-4595193 | None:intergenic |
| CAAGAAATTGACTCTGCCAC+AGG | 0.551982 | 2.1:+4595498 | MS.gene057024:CDS |
| ATGGGTCGGGCTAATTGGGT+CGG | 0.560742 | 2.1:-4595194 | None:intergenic |
| ATGCTGGTGAAAGTTTAAGC+TGG | 0.564804 | 2.1:-4597886 | None:intergenic |
| ACGAAAGTTTGTAATAACAA+AGG | 0.565525 | 2.1:+4597653 | MS.gene057024:CDS |
| GAACTTCCAAAGCTGAATCC+GGG | 0.573483 | 2.1:-4595285 | None:intergenic |
| GAAGGGAGAGTGATGCAAAG+AGG | 0.578027 | 2.1:-4595072 | None:intergenic |
| TAATTCTTCAAAAGAAATGT+CGG | 0.585303 | 2.1:-4598160 | None:intergenic |
| AACAAACCTGTTGATGAAGT+CGG | 0.610559 | 2.1:-4597710 | None:intergenic |
| AGCCCATTTAGCGGAATCAG+AGG | 0.611536 | 2.1:-4595248 | None:intergenic |
| GCCCATTTAGCGGAATCAGA+GGG | 0.633492 | 2.1:-4595247 | None:intergenic |
| GAACAAGGTAGCCCATTTAG+CGG | 0.641926 | 2.1:-4595257 | None:intergenic |
| GTGATGCAAAGAGGAAAATG+GGG | 0.656559 | 2.1:-4595063 | None:intergenic |
| GCTTGAACTTGGAGTGTGCG+CGG | 0.681523 | 2.1:+4598089 | MS.gene057024:CDS |
| ATGCAAAGAGGAAAATGGGG+TGG | 0.741334 | 2.1:-4595060 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGCAAATAATATTTATTTT+GGG | - | chr2.1:4596622-4596641 | None:intergenic | 10.0% |
| !!! | CATTTTAAGTAATATATTTT+AGG | + | chr2.1:4596006-4596025 | MS.gene057024:intron | 10.0% |
| !!! | TTTAATCAACATAAATTTTT+TGG | - | chr2.1:4597583-4597602 | None:intergenic | 10.0% |
| !! | ATTATGTAAAATTGAGTTAA+AGG | + | chr2.1:4595705-4595724 | MS.gene057024:intron | 15.0% |
| !! | TTTCTATAACAAATTATCAA+TGG | + | chr2.1:4595540-4595559 | MS.gene057024:intron | 15.0% |
| !!! | ATATTTATTTTGGGAAAAAA+TGG | - | chr2.1:4596613-4596632 | None:intergenic | 15.0% |
| !!! | CAACAATTAATTTAAAATTG+AGG | - | chr2.1:4596526-4596545 | None:intergenic | 15.0% |
| !!! | GATGCAAATAATATTTATTT+TGG | - | chr2.1:4596623-4596642 | None:intergenic | 15.0% |
| !!! | TATTTATTTTGGGAAAAAAT+GGG | - | chr2.1:4596612-4596631 | None:intergenic | 15.0% |
| !! | ATACACTTATTTCCTTTATT+AGG | - | chr2.1:4595645-4595664 | None:intergenic | 20.0% |
| !! | ATTAGAACAAAAAAGATTAG+AGG | + | chr2.1:4597832-4597851 | MS.gene057024:CDS | 20.0% |
| !! | CATTTCTTCAAAATAACAAA+AGG | + | chr2.1:4596082-4596101 | MS.gene057024:intron | 20.0% |
| !! | TAACTACATTAGAATAAACT+TGG | - | chr2.1:4597282-4597301 | None:intergenic | 20.0% |
| !! | TAATTCTTCAAAAGAAATGT+CGG | - | chr2.1:4598163-4598182 | None:intergenic | 20.0% |
| !! | TTATAAAGCTTGTAAATGTA+TGG | + | chr2.1:4598235-4598254 | MS.gene057024:intron | 20.0% |
| !! | TTGCAAATTTGTAATTAGAT+TGG | + | chr2.1:4596121-4596140 | MS.gene057024:intron | 20.0% |
| !! | TTTCCTAAATAAATTTCCAT+GGG | - | chr2.1:4597325-4597344 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | chr2.1:4595862-4595881 | None:intergenic | 20.0% |
| !!! | AAACATGTCAAAATCAATTT+TGG | + | chr2.1:4595861-4595880 | MS.gene057024:intron | 20.0% |
| !!! | AAAGAATCGATTTTGATAAA+TGG | - | chr2.1:4595216-4595235 | None:intergenic | 20.0% |
| !!! | AAGAATCGATTTTGATAAAT+GGG | - | chr2.1:4595215-4595234 | None:intergenic | 20.0% |
| !!! | ACAAGCTTTATAAAAAACAA+AGG | - | chr2.1:4598228-4598247 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGGGAAAAAATG+GGG | - | chr2.1:4596611-4596630 | None:intergenic | 20.0% |
| !!! | CAAGCTTTATAAAAAACAAA+GGG | - | chr2.1:4598227-4598246 | None:intergenic | 20.0% |
| !!! | CTTGTAGATATTGATTTAAA+TGG | - | chr2.1:4596993-4597012 | None:intergenic | 20.0% |
| ! | AAAGGAAATAAGTGTATGTT+TGG | + | chr2.1:4595648-4595667 | MS.gene057024:intron | 25.0% |
| ! | AACTAGAAATAAGTCTTCAA+TGG | - | chr2.1:4597348-4597367 | None:intergenic | 25.0% |
| ! | AATACAGAAAAAGTGGTTAT+TGG | - | chr2.1:4598315-4598334 | None:intergenic | 25.0% |
| ! | AATTCAAATTCAACAGTAAC+AGG | - | chr2.1:4595578-4595597 | None:intergenic | 25.0% |
| ! | ACGAAAGTTTGTAATAACAA+AGG | + | chr2.1:4597653-4597672 | MS.gene057024:CDS | 25.0% |
| ! | ACTAAAATCTCAGTTTGAAA+AGG | - | chr2.1:4597149-4597168 | None:intergenic | 25.0% |
| ! | ATAAATTTCCATGGGTAAAA+AGG | - | chr2.1:4597317-4597336 | None:intergenic | 25.0% |
| ! | ATTTATGTGTCAATAGATAG+AGG | + | chr2.1:4596344-4596363 | MS.gene057024:intron | 25.0% |
| ! | ATTTGTACAGGCTAAAAAAT+GGG | + | chr2.1:4598332-4598351 | MS.gene057024:intron | 25.0% |
| ! | GAAGAAGAAAGAAATGAATT+CGG | + | chr2.1:4595345-4595364 | MS.gene057024:CDS | 25.0% |
| ! | GACATAGTTCAAAGTTTAAA+TGG | + | chr2.1:4596811-4596830 | MS.gene057024:intron | 25.0% |
| ! | GATTTAGTATTATTCTTCTC+AGG | + | chr2.1:4597554-4597573 | MS.gene057024:intron | 25.0% |
| ! | GTTTCCTAAATAAATTTCCA+TGG | - | chr2.1:4597326-4597345 | None:intergenic | 25.0% |
| ! | TAAAAAATCAACCAACTTGA+AGG | + | chr2.1:4597490-4597509 | MS.gene057024:intron | 25.0% |
| ! | TATTTGTACAGGCTAAAAAA+TGG | + | chr2.1:4598331-4598350 | MS.gene057024:intron | 25.0% |
| ! | TTACCCATGGAAATTTATTT+AGG | + | chr2.1:4597319-4597338 | MS.gene057024:intron | 25.0% |
| ! | TTCAAGTAGAATCAAAATTC+TGG | + | chr2.1:4595821-4595840 | MS.gene057024:intron | 25.0% |
| !! | TACATTGTCTTATTGTTACA+GGG | + | chr2.1:4597617-4597636 | MS.gene057024:intron | 25.0% |
| !! | TACTTGTTCTTTTGTTAGTT+TGG | + | chr2.1:4596029-4596048 | MS.gene057024:intron | 25.0% |
| !! | TGTTTTCTTGTACTATAGTT+TGG | + | chr2.1:4595611-4595630 | MS.gene057024:intron | 25.0% |
| !! | TTACATTGTCTTATTGTTAC+AGG | + | chr2.1:4597616-4597635 | MS.gene057024:intron | 25.0% |
| !! | TTTGGTAATTTATTGAAGCT+AGG | + | chr2.1:4596047-4596066 | MS.gene057024:intron | 25.0% |
| !! | TTTTACTGTTGTAGCATATA+AGG | - | chr2.1:4596884-4596903 | None:intergenic | 25.0% |
| !!! | AGATTCTGTCATTTTATGTA+AGG | + | chr2.1:4597527-4597546 | MS.gene057024:intron | 25.0% |
| !!! | TATATGTTTGGTTTCACTTT+TGG | - | chr2.1:4595892-4595911 | None:intergenic | 25.0% |
| !!! | TATCAGAAAGTTTGGTTTTT+TGG | - | chr2.1:4595159-4595178 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTTGGTTGTTTTT+GGG | - | chr2.1:4595148-4595167 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTTGGTTGTTTT+TGG | - | chr2.1:4595149-4595168 | None:intergenic | 25.0% |
| AAAATATGCTCTCTCTCATT+TGG | + | chr2.1:4597077-4597096 | MS.gene057024:intron | 30.0% | |
| AAATACTATTACTTGCCACT+TGG | - | chr2.1:4595915-4595934 | None:intergenic | 30.0% | |
| AAATCAATATCTACAAGCCT+TGG | + | chr2.1:4596996-4597015 | MS.gene057024:intron | 30.0% | |
| AACAAAATGAACTTCATCAG+AGG | - | chr2.1:4597789-4597808 | None:intergenic | 30.0% | |
| AATCAATATCTACAAGCCTT+GGG | + | chr2.1:4596997-4597016 | MS.gene057024:intron | 30.0% | |
| AATCTCAGTTTGAAAAGGAA+AGG | - | chr2.1:4597144-4597163 | None:intergenic | 30.0% | |
| ACAAGACAACATGTTTATTC+AGG | - | chr2.1:4596252-4596271 | None:intergenic | 30.0% | |
| ACATGAATTCATGAAGTTCA+TGG | + | chr2.1:4596841-4596860 | MS.gene057024:intron | 30.0% | |
| AGAACAAAAAAGATTAGAGG+AGG | + | chr2.1:4597835-4597854 | MS.gene057024:CDS | 30.0% | |
| AGGTGAATTATCAGAAAGTT+TGG | - | chr2.1:4595167-4595186 | None:intergenic | 30.0% | |
| ATCTACAAGTTAATTTCCCA+AGG | - | chr2.1:4597016-4597035 | None:intergenic | 30.0% | |
| ATTATTAGCACAAGAGAAGA+AGG | + | chr2.1:4598179-4598198 | MS.gene057024:CDS | 30.0% | |
| CAATCAAACTATTAGCAAAC+CGG | - | chr2.1:4597228-4597247 | None:intergenic | 30.0% | |
| CTAATAGTTTGATTGATGCT+AGG | + | chr2.1:4597233-4597252 | MS.gene057024:CDS | 30.0% | |
| CTGCAAGTTCGATAATATAA+AGG | - | chr2.1:4597763-4597782 | None:intergenic | 30.0% | |
| CTGTACAAATACAGAAAAAG+TGG | - | chr2.1:4598322-4598341 | None:intergenic | 30.0% | |
| GAGTTAAAGGTAAAGTGATT+TGG | + | chr2.1:4595718-4595737 | MS.gene057024:intron | 30.0% | |
| TAAGTGTATGTTTGGTTATG+CGG | + | chr2.1:4595656-4595675 | MS.gene057024:intron | 30.0% | |
| TATATTGCAGTATGCAGTTA+TGG | + | chr2.1:4596656-4596675 | MS.gene057024:intron | 30.0% | |
| TATCTGTTTGTTCATATTGG+AGG | + | chr2.1:4597386-4597405 | MS.gene057024:intron | 30.0% | |
| TATGAAACTTGAAATACCTG+TGG | - | chr2.1:4595517-4595536 | None:intergenic | 30.0% | |
| TCAATAGATAGAGGAATTCA+TGG | + | chr2.1:4596353-4596372 | MS.gene057024:intron | 30.0% | |
| TCATTACAATTCTTGTAGCT+AGG | + | chr2.1:4597983-4598002 | MS.gene057024:intron | 30.0% | |
| TGCTATCTGTTTGTTCATAT+TGG | + | chr2.1:4597383-4597402 | MS.gene057024:intron | 30.0% | |
| TTGGTTAGTGTTCCTAATAA+AGG | + | chr2.1:4595630-4595649 | MS.gene057024:intron | 30.0% | |
| TTTAGGTAAGAGAAATGCTA+GGG | + | chr2.1:4595980-4595999 | MS.gene057024:intron | 30.0% | |
| TTTGCAAATAACCTTCAAGT+TGG | - | chr2.1:4597504-4597523 | None:intergenic | 30.0% | |
| ! | AAGAGAAGAAGGATTCATTT+TGG | + | chr2.1:4598190-4598209 | MS.gene057024:CDS | 30.0% |
| ! | TATGATACCTTTTTGTATGC+TGG | - | chr2.1:4597905-4597924 | None:intergenic | 30.0% |
| !! | ATAGGGATTTGTTCTTTTTG+AGG | + | chr2.1:4596169-4596188 | MS.gene057024:intron | 30.0% |
| !! | ATCGATTTTGATAAATGGGT+CGG | - | chr2.1:4595211-4595230 | None:intergenic | 30.0% |
| !! | GGTTTTCATTTTAAGTAGCT+TGG | + | chr2.1:4597104-4597123 | MS.gene057024:intron | 30.0% |
| !! | TAGGGATTTGTTCTTTTTGA+GGG | + | chr2.1:4596170-4596189 | MS.gene057024:intron | 30.0% |
| !! | TTTTAGGTAAGAGAAATGCT+AGG | + | chr2.1:4595979-4595998 | MS.gene057024:intron | 30.0% |
| !!! | CACTTTTTCTGTATTTGTAC+AGG | + | chr2.1:4598320-4598339 | MS.gene057024:intron | 30.0% |
| !!! | CATGTTTGGTTCATTGATTT+TGG | - | chr2.1:4595848-4595867 | None:intergenic | 30.0% |
| !!! | TGGTTTTTTGGTTGTTTTTG+GGG | - | chr2.1:4595147-4595166 | None:intergenic | 30.0% |
| AAACCAAAATAGGGAAGATG+TGG | - | chr2.1:4598264-4598283 | None:intergenic | 35.0% | |
| AACAAAGGCTTTACTATGCA+AGG | + | chr2.1:4597668-4597687 | MS.gene057024:CDS | 35.0% | |
| AACTGCATACTGCAATATAG+TGG | - | chr2.1:4596655-4596674 | None:intergenic | 35.0% | |
| ACATTCATGTCTAAGTGAGT+TGG | + | chr2.1:4595743-4595762 | MS.gene057024:intron | 35.0% | |
| ACGCTACTTGAAGAAGTAAA+CGG | - | chr2.1:4595424-4595443 | None:intergenic | 35.0% | |
| ACTTTCACCAGCATACAAAA+AGG | + | chr2.1:4597895-4597914 | MS.gene057024:CDS | 35.0% | |
| AGTGATGCAAAGAGGAAAAT+GGG | - | chr2.1:4595067-4595086 | None:intergenic | 35.0% | |
| ATGTGAGCAATCACAATGAA+TGG | + | chr2.1:4596287-4596306 | MS.gene057024:intron | 35.0% | |
| ATTCTTATCCTCTATTACGC+AGG | + | chr2.1:4597198-4597217 | MS.gene057024:intron | 35.0% | |
| ATTCTTGTAGCTAGGTTGTT+TGG | + | chr2.1:4597991-4598010 | MS.gene057024:intron | 35.0% | |
| GAAACCAAACATATACCAAG+TGG | + | chr2.1:4595897-4595916 | MS.gene057024:intron | 35.0% | |
| GCAATCACAATGAATGGAAA+TGG | + | chr2.1:4596293-4596312 | MS.gene057024:intron | 35.0% | |
| GGAAAAATGTACCCACTTTA+GGG | + | chr2.1:4596192-4596211 | MS.gene057024:intron | 35.0% | |
| GGATTGTTACATGGATCAAA+CGG | + | chr2.1:4596922-4596941 | MS.gene057024:intron | 35.0% | |
| GTAGAGAGAGAAAAAGAGAA+TGG | - | chr2.1:4595107-4595126 | None:intergenic | 35.0% | |
| TGAATTAGTCACGTAACTCA+AGG | + | chr2.1:4596413-4596432 | MS.gene057024:intron | 35.0% | |
| TGTGTACTTCCTCTTTGTAT+AGG | + | chr2.1:4595943-4595962 | MS.gene057024:intron | 35.0% | |
| TTCTGTGAACATAGAGTTGA+GGG | - | chr2.1:4597058-4597077 | None:intergenic | 35.0% | |
| TTGATGAAGATGCTTGAACT+TGG | + | chr2.1:4598078-4598097 | MS.gene057024:intron | 35.0% | |
| TTTCTGTGAACATAGAGTTG+AGG | - | chr2.1:4597059-4597078 | None:intergenic | 35.0% | |
| ! | AACAAACCTGTTGATGAAGT+CGG | - | chr2.1:4597713-4597732 | None:intergenic | 35.0% |
| ! | AAGTGAAGAGTGTGTGAAAA+CGG | + | chr2.1:4595369-4595388 | MS.gene057024:CDS | 35.0% |
| ! | AGGCAAGCTATGCATATTTT+AGG | + | chr2.1:4595963-4595982 | MS.gene057024:intron | 35.0% |
| ! | ATATTTCGCCTTTTTACCCA+TGG | + | chr2.1:4597306-4597325 | MS.gene057024:intron | 35.0% |
| ! | GTTGTTTCCATTTGACATCA+GGG | + | chr2.1:4596315-4596334 | MS.gene057024:intron | 35.0% |
| !! | AGGGATTTGTTCTTTTTGAG+GGG | + | chr2.1:4596171-4596190 | MS.gene057024:intron | 35.0% |
| !! | ATGTTTGGTTTCACTTTTGG+AGG | - | chr2.1:4595889-4595908 | None:intergenic | 35.0% |
| !! | TCGATTTTGATAAATGGGTC+GGG | - | chr2.1:4595210-4595229 | None:intergenic | 35.0% |
| !! | TTCATCAACAGGTTTGTTGT+TGG | + | chr2.1:4597715-4597734 | MS.gene057024:intron | 35.0% |
| !!! | CATCTTCCCTATTTTGGTTT+TGG | + | chr2.1:4598264-4598283 | MS.gene057024:intron | 35.0% |
| !!! | GGTTTTTTGGTTGTTTTTGG+GGG | - | chr2.1:4595146-4595165 | None:intergenic | 35.0% |
| !!! | GTTTTTTGGTTGTTTTTGGG+GGG | - | chr2.1:4595145-4595164 | None:intergenic | 35.0% |
| !!! | TTCCCTATTTTGGTTTTGGA+GGG | + | chr2.1:4598268-4598287 | MS.gene057024:intron | 35.0% |
| AAAGCCATTTACCACTAGTG+TGG | + | chr2.1:4596901-4596920 | MS.gene057024:intron | 40.0% | |
| AGAGAATGGTTAGAGAGAGA+AGG | - | chr2.1:4595093-4595112 | None:intergenic | 40.0% | |
| ATAAATGGGTCGGGCTAATT+GGG | - | chr2.1:4595201-4595220 | None:intergenic | 40.0% | |
| ATGCTGGTGAAAGTTTAAGC+TGG | - | chr2.1:4597889-4597908 | None:intergenic | 40.0% | |
| CAATCCACACTAGTGGTAAA+TGG | - | chr2.1:4596908-4596927 | None:intergenic | 40.0% | |
| CATGTAACAATCCACACTAG+TGG | - | chr2.1:4596915-4596934 | None:intergenic | 40.0% | |
| GAAGGAAAAACTGTGTGAAC+AGG | + | chr2.1:4598113-4598132 | MS.gene057024:CDS | 40.0% | |
| GAGAATGGTTAGAGAGAGAA+GGG | - | chr2.1:4595092-4595111 | None:intergenic | 40.0% | |
| GAGTGATGCAAAGAGGAAAA+TGG | - | chr2.1:4595068-4595087 | None:intergenic | 40.0% | |
| GGGAAAAATGTACCCACTTT+AGG | + | chr2.1:4596191-4596210 | MS.gene057024:intron | 40.0% | |
| GTGATGCAAAGAGGAAAATG+GGG | - | chr2.1:4595066-4595085 | None:intergenic | 40.0% | |
| GTTCAAGCATCTTCATCAAG+AGG | - | chr2.1:4598077-4598096 | None:intergenic | 40.0% | |
| TCCCCTCCAAAACCAAAATA+GGG | - | chr2.1:4598273-4598292 | None:intergenic | 40.0% | |
| TGTAGCTAGGTTGTTTGGTT+TGG | + | chr2.1:4597996-4598015 | MS.gene057024:intron | 40.0% | |
| TTCCATCGGAGAAGAAAAAG+AGG | + | chr2.1:4595305-4595324 | MS.gene057024:CDS | 40.0% | |
| TTCCCCTCCAAAACCAAAAT+AGG | - | chr2.1:4598274-4598293 | None:intergenic | 40.0% | |
| ! | AAGCCACATCTTCCCTATTT+TGG | + | chr2.1:4598258-4598277 | MS.gene057024:intron | 40.0% |
| ! | ACTTTTCACTCACCCTAAAG+TGG | - | chr2.1:4596207-4596226 | None:intergenic | 40.0% |
| ! | AGTGAAGAGTGTGTGAAAAC+GGG | + | chr2.1:4595370-4595389 | MS.gene057024:CDS | 40.0% |
| ! | CACTAGTGTGGATTGTTACA+TGG | + | chr2.1:4596913-4596932 | MS.gene057024:intron | 40.0% |
| ! | CATAGCTTGCCTATACAAAG+AGG | - | chr2.1:4595955-4595974 | None:intergenic | 40.0% |
| ! | CTTGCCACTTGGTATATGTT+TGG | - | chr2.1:4595904-4595923 | None:intergenic | 40.0% |
| ! | CTTTTCACTCACCCTAAAGT+GGG | - | chr2.1:4596206-4596225 | None:intergenic | 40.0% |
| ! | GGTTGTTTCCATTTGACATC+AGG | + | chr2.1:4596314-4596333 | MS.gene057024:intron | 40.0% |
| ! | TTCCTCTTTTTCTTCTCCGA+TGG | - | chr2.1:4595310-4595329 | None:intergenic | 40.0% |
| !! | CAGTTTTGACAGAAGAGGAT+GGG | + | chr2.1:4596146-4596165 | MS.gene057024:intron | 40.0% |
| !! | TCAGTTTTGACAGAAGAGGA+TGG | + | chr2.1:4596145-4596164 | MS.gene057024:intron | 40.0% |
| !! | TGGATCAGTTTTGACAGAAG+AGG | + | chr2.1:4596141-4596160 | MS.gene057024:intron | 40.0% |
| !! | TTCAGCTTTGGAAGTTCCAT+CGG | + | chr2.1:4595291-4595310 | MS.gene057024:CDS | 40.0% |
| !!! | ATTTTGGTTTTGGAGGGGAA+GGG | + | chr2.1:4598274-4598293 | MS.gene057024:intron | 40.0% |
| !!! | CTTCCCTATTTTGGTTTTGG+AGG | + | chr2.1:4598267-4598286 | MS.gene057024:intron | 40.0% |
| !!! | TATTTTGGTTTTGGAGGGGA+AGG | + | chr2.1:4598273-4598292 | MS.gene057024:intron | 40.0% |
| !!! | TCCCTATTTTGGTTTTGGAG+GGG | + | chr2.1:4598269-4598288 | MS.gene057024:intron | 40.0% |
| ACCATCCAGATGCATTCAGA+AGG | - | chr2.1:4596474-4596493 | None:intergenic | 45.0% | |
| ACCCTCTGATTCCGCTAAAT+GGG | + | chr2.1:4595246-4595265 | MS.gene057024:CDS | 45.0% | |
| ATGCAAAGAGGAAAATGGGG+TGG | - | chr2.1:4595063-4595082 | None:intergenic | 45.0% | |
| CTGTGGCAGAGTCAATTTCT+TGG | - | chr2.1:4595500-4595519 | None:intergenic | 45.0% | |
| GAACAAGGTAGCCCATTTAG+CGG | - | chr2.1:4595260-4595279 | None:intergenic | 45.0% | |
| GAACTTCCAAAGCTGAATCC+GGG | - | chr2.1:4595288-4595307 | None:intergenic | 45.0% | |
| GATAAATGGGTCGGGCTAAT+TGG | - | chr2.1:4595202-4595221 | None:intergenic | 45.0% | |
| GCAGTATGCAGTTATGGCTA+TGG | + | chr2.1:4596662-4596681 | MS.gene057024:intron | 45.0% | |
| GGAACTTCCAAAGCTGAATC+CGG | - | chr2.1:4595289-4595308 | None:intergenic | 45.0% | |
| GTAACTCAAGGCGATGTTCA+GGG | + | chr2.1:4596425-4596444 | MS.gene057024:intron | 45.0% | |
| TACCACTCCCTGATGTCAAA+TGG | - | chr2.1:4596325-4596344 | None:intergenic | 45.0% | |
| TACCCTCTGATTCCGCTAAA+TGG | + | chr2.1:4595245-4595264 | MS.gene057024:CDS | 45.0% | |
| TGACAGAAGAGGATGGGATA+GGG | + | chr2.1:4596152-4596171 | MS.gene057024:intron | 45.0% | |
| TTCCATTTGACATCAGGGAG+TGG | + | chr2.1:4596320-4596339 | MS.gene057024:intron | 45.0% | |
| TTGACAGAAGAGGATGGGAT+AGG | + | chr2.1:4596151-4596170 | MS.gene057024:intron | 45.0% | |
| ! | CAAGAAATTGACTCTGCCAC+AGG | + | chr2.1:4595498-4595517 | MS.gene057024:CDS | 45.0% |
| ! | TGCTCTCTCTCATTTGGAGT+TGG | + | chr2.1:4597083-4597102 | MS.gene057024:intron | 45.0% |
| ! | TTTCGACCGACTTCATCAAC+AGG | + | chr2.1:4597704-4597723 | MS.gene057024:CDS | 45.0% |
| !! | AGTAGCTTGGTAATGCTACG+TGG | + | chr2.1:4597117-4597136 | MS.gene057024:intron | 45.0% |
| !!! | TTGGTTGTTTTTGGGGGGTT+TGG | - | chr2.1:4595140-4595159 | None:intergenic | 45.0% |
| ACTCGCCTTCTGAATGCATC+TGG | + | chr2.1:4596466-4596485 | MS.gene057024:intron | 50.0% | |
| AGCCCATTTAGCGGAATCAG+AGG | - | chr2.1:4595251-4595270 | None:intergenic | 50.0% | |
| CCTCTATTACGCAGGTTGTC+CGG | + | chr2.1:4597206-4597225 | MS.gene057024:intron | 50.0% | |
| CGTAACTCAAGGCGATGTTC+AGG | + | chr2.1:4596424-4596443 | MS.gene057024:intron | 50.0% | |
| GAAGGGAGAGTGATGCAAAG+AGG | - | chr2.1:4595075-4595094 | None:intergenic | 50.0% | |
| GCCCATTTAGCGGAATCAGA+GGG | - | chr2.1:4595250-4595269 | None:intergenic | 50.0% | |
| GCCTTCTGAATGCATCTGGA+TGG | + | chr2.1:4596470-4596489 | MS.gene057024:intron | 50.0% | |
| ! | CTAATTGGGTCGGGTTGTGA+AGG | - | chr2.1:4595187-4595206 | None:intergenic | 50.0% |
| ATGGGTCGGGCTAATTGGGT+CGG | - | chr2.1:4595197-4595216 | None:intergenic | 55.0% | |
| CCGGACAACCTGCGTAATAG+AGG | - | chr2.1:4597209-4597228 | None:intergenic | 55.0% | |
| GCTTGAACTTGGAGTGTGCG+CGG | + | chr2.1:4598089-4598108 | MS.gene057024:CDS | 55.0% | |
| TGAATCCGGGTCGTCGAACA+AGG | - | chr2.1:4595275-4595294 | None:intergenic | 55.0% | |
| AAGGCGATGTTCAGGGCAGG+CGG | + | chr2.1:4596432-4596451 | MS.gene057024:intron | 60.0% | |
| ACTTGGAGTGTGCGCGGAGA+AGG | + | chr2.1:4598095-4598114 | MS.gene057024:CDS | 60.0% | |
| CGACGACCCGGATTCAGCTT+TGG | + | chr2.1:4595279-4595298 | MS.gene057024:CDS | 60.0% | |
| CTCAAGGCGATGTTCAGGGC+AGG | + | chr2.1:4596429-4596448 | MS.gene057024:intron | 60.0% | |
| GGCTACCTTGTTCGACGACC+CGG | + | chr2.1:4595267-4595286 | MS.gene057024:CDS | 60.0% | |
| TGGGTCGGGCTAATTGGGTC+GGG | - | chr2.1:4595196-4595215 | None:intergenic | 60.0% | |
| CGATGTTCAGGGCAGGCGGT+GGG | + | chr2.1:4596436-4596455 | MS.gene057024:intron | 65.0% | |
| GATGTTCAGGGCAGGCGGTG+GGG | + | chr2.1:4596437-4596456 | MS.gene057024:intron | 65.0% | |
| GCGATGTTCAGGGCAGGCGG+TGG | + | chr2.1:4596435-4596454 | MS.gene057024:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 4595055 | 4598378 | 4595055 | ID=MS.gene057024 |
| chr2.1 | mRNA | 4595055 | 4598378 | 4595055 | ID=MS.gene057024.t1;Parent=MS.gene057024 |
| chr2.1 | exon | 4595055 | 4595519 | 4595055 | ID=MS.gene057024.t1.exon1;Parent=MS.gene057024.t1 |
| chr2.1 | CDS | 4595055 | 4595519 | 4595055 | ID=cds.MS.gene057024.t1;Parent=MS.gene057024.t1 |
| chr2.1 | exon | 4597220 | 4597272 | 4597220 | ID=MS.gene057024.t1.exon2;Parent=MS.gene057024.t1 |
| chr2.1 | CDS | 4597220 | 4597272 | 4597220 | ID=cds.MS.gene057024.t1;Parent=MS.gene057024.t1 |
| chr2.1 | exon | 4597638 | 4597725 | 4597638 | ID=MS.gene057024.t1.exon3;Parent=MS.gene057024.t1 |
| chr2.1 | CDS | 4597638 | 4597725 | 4597638 | ID=cds.MS.gene057024.t1;Parent=MS.gene057024.t1 |
| chr2.1 | exon | 4597818 | 4597916 | 4597818 | ID=MS.gene057024.t1.exon4;Parent=MS.gene057024.t1 |
| chr2.1 | CDS | 4597818 | 4597916 | 4597818 | ID=cds.MS.gene057024.t1;Parent=MS.gene057024.t1 |
| chr2.1 | exon | 4598087 | 4598211 | 4598087 | ID=MS.gene057024.t1.exon5;Parent=MS.gene057024.t1 |
| chr2.1 | CDS | 4598087 | 4598211 | 4598087 | ID=cds.MS.gene057024.t1;Parent=MS.gene057024.t1 |
| chr2.1 | exon | 4598342 | 4598378 | 4598342 | ID=MS.gene057024.t1.exon6;Parent=MS.gene057024.t1 |
| chr2.1 | CDS | 4598342 | 4598378 | 4598342 | ID=cds.MS.gene057024.t1;Parent=MS.gene057024.t1 |
| Gene Sequence |
| Protein sequence |
