Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057117.t1 | AES72521.1 | 87.8 | 270 | 20 | 4 | 1 | 266 | 1 | 261 | 4.70E-126 | 460.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057117.t1 | Q9LVU8 | 40.3 | 201 | 105 | 3 | 71 | 260 | 53 | 249 | 8.5e-28 | 125.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057117.t1 | G7J7G0 | 87.8 | 270 | 20 | 4 | 1 | 266 | 1 | 261 | 3.4e-126 | 460.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene057117.t1 | TF | RWP-RK |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057115 | MS.gene057117 | 0.880129 | 7.08E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057117.t1 | MTR_3g091700 | 87.778 | 270 | 20 | 4 | 1 | 266 | 1 | 261 | 1.03e-173 | 479 |
| MS.gene057117.t1 | MTR_3g435550 | 47.321 | 112 | 53 | 1 | 159 | 264 | 59 | 170 | 1.53e-29 | 110 |
| MS.gene057117.t1 | MTR_5g024070 | 38.400 | 125 | 59 | 2 | 153 | 259 | 190 | 314 | 3.50e-21 | 91.3 |
| MS.gene057117.t1 | MTR_3g091720 | 63.462 | 52 | 12 | 1 | 215 | 266 | 19 | 63 | 3.74e-13 | 63.2 |
| MS.gene057117.t1 | MTR_0140s0010 | 47.143 | 70 | 28 | 2 | 189 | 249 | 150 | 219 | 1.09e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057117.t1 | AT5G53040 | 57.143 | 105 | 45 | 0 | 159 | 263 | 148 | 252 | 1.57e-34 | 125 |
| MS.gene057117.t1 | AT5G66990 | 53.153 | 111 | 41 | 2 | 164 | 263 | 164 | 274 | 1.13e-31 | 118 |
| MS.gene057117.t1 | AT1G18790 | 49.565 | 115 | 48 | 1 | 156 | 260 | 125 | 239 | 4.84e-30 | 114 |
| MS.gene057117.t1 | AT1G74480 | 48.182 | 110 | 47 | 1 | 157 | 256 | 133 | 242 | 5.87e-29 | 111 |
| MS.gene057117.t1 | AT4G35590 | 32.593 | 135 | 71 | 2 | 143 | 257 | 169 | 303 | 3.15e-17 | 80.1 |
| MS.gene057117.t1 | AT4G35590 | 32.593 | 135 | 71 | 2 | 143 | 257 | 219 | 353 | 5.99e-17 | 80.1 |
| MS.gene057117.t1 | AT5G16100 | 37.113 | 97 | 53 | 1 | 147 | 235 | 342 | 438 | 7.89e-13 | 68.2 |
Find 47 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTAGCAGCCATTGTTAA+AGG | 0.208533 | 3.1:+73635571 | None:intergenic |
| TTGGAGCCTTGAGTGATTTC+AGG | 0.214370 | 3.1:+73636447 | None:intergenic |
| AATGTTGTCTTGCCTGAGTT+GGG | 0.325768 | 3.1:-73635823 | MS.gene057117:CDS |
| CAATGTTGTCTTGCCTGAGT+TGG | 0.335905 | 3.1:-73635824 | MS.gene057117:CDS |
| ATGATTTCTTTGAGTTTGAT+TGG | 0.342407 | 3.1:-73635975 | MS.gene057117:CDS |
| GAAGATGTTGGAGAAACTTC+CGG | 0.360968 | 3.1:-73634684 | MS.gene057117:CDS |
| GCCTTGAGTGATTTCAGGTT+GGG | 0.378542 | 3.1:+73636452 | None:intergenic |
| CAGCAATAGTCTCACCTTTG+TGG | 0.390633 | 3.1:+73635791 | None:intergenic |
| AAGATGTTGGAGAAACTTCC+GGG | 0.393818 | 3.1:-73634683 | MS.gene057117:CDS |
| TCATCATTCAAATCCATTCC+CGG | 0.427588 | 3.1:+73634665 | None:intergenic |
| TTGTGAAGAAAGAGAAGGAA+TGG | 0.429732 | 3.1:-73635720 | MS.gene057117:CDS |
| AGAATTGTCATTAGTTCCAT+TGG | 0.430301 | 3.1:-73635689 | MS.gene057117:CDS |
| CAGAAAACTGAGGAGCTTGA+TGG | 0.447810 | 3.1:-73635482 | MS.gene057117:CDS |
| GTACGAGTACTAGCATCATT+AGG | 0.450426 | 3.1:-73635645 | MS.gene057117:CDS |
| CTCGTACTGCTACTTGTACT+TGG | 0.454025 | 3.1:+73635661 | None:intergenic |
| GGTACTCATCGACAACCTTA+AGG | 0.457457 | 3.1:-73635461 | MS.gene057117:intron |
| GTTGGAGAAACTTCCGGGAA+TGG | 0.462988 | 3.1:-73634678 | MS.gene057117:CDS |
| CCTCAAAATTATTCTGATCA+AGG | 0.463476 | 3.1:+73635863 | None:intergenic |
| TGATTTCTTTGAGTTTGATT+GGG | 0.465378 | 3.1:-73635974 | MS.gene057117:CDS |
| TGTGAAGAAAGAGAAGGAAT+GGG | 0.479018 | 3.1:-73635719 | MS.gene057117:CDS |
| TGTTGTGTGATGCAGGAAAA+GGG | 0.482015 | 3.1:-73634743 | MS.gene057117:intron |
| AAATCACTCAAGGCTCCAAC+TGG | 0.487286 | 3.1:-73636443 | MS.gene057117:CDS |
| ATGATGAAATCAAGAAGCTT+AGG | 0.499327 | 3.1:-73634649 | MS.gene057117:CDS |
| CTTGTACTTGGCAATGCCAA+TGG | 0.515278 | 3.1:+73635673 | None:intergenic |
| GGAGAAGCAAAAGAAGATGT+TGG | 0.518512 | 3.1:-73634696 | MS.gene057117:CDS |
| GCTTCTGTGAAAACTGAAAG+TGG | 0.520217 | 3.1:-73635745 | MS.gene057117:CDS |
| AACTCAAAGAAATCATCAAA+CGG | 0.523633 | 3.1:+73635982 | None:intergenic |
| GACTAAGGAAGTTGCCATGT+TGG | 0.527747 | 3.1:-73634717 | MS.gene057117:CDS |
| ATGTTGTCTTGCCTGAGTTG+GGG | 0.533975 | 3.1:-73635822 | MS.gene057117:CDS |
| GCAGGAAAAGGGTTTGACTA+AGG | 0.541768 | 3.1:-73634732 | MS.gene057117:intron |
| AGCCTTGAGTGATTTCAGGT+TGG | 0.554392 | 3.1:+73636451 | None:intergenic |
| TTGAACATTGTGATACCAGT+TGG | 0.557847 | 3.1:+73636428 | None:intergenic |
| TGGTTGTAATGCCCCAACTC+AGG | 0.557980 | 3.1:+73635811 | None:intergenic |
| AATTATTCTGATCAAGGTGT+GGG | 0.571228 | 3.1:+73635869 | None:intergenic |
| CTCAGGCAAGACAACATTGA+GGG | 0.577274 | 3.1:+73635828 | None:intergenic |
| GTACTAGCATCATTAGGAAG+AGG | 0.587268 | 3.1:-73635639 | MS.gene057117:CDS |
| TATTCTGATCAAGGTGTGGG+AGG | 0.607927 | 3.1:+73635872 | None:intergenic |
| ACCCAACCTGAAATCACTCA+AGG | 0.608828 | 3.1:-73636453 | MS.gene057117:CDS |
| AAATTATTCTGATCAAGGTG+TGG | 0.609905 | 3.1:+73635868 | None:intergenic |
| GCAGGGAGCTCAATATCACT+AGG | 0.629741 | 3.1:-73635513 | MS.gene057117:CDS |
| GCTGCTAAGAAAATGAATGT+TGG | 0.631864 | 3.1:-73635559 | MS.gene057117:CDS |
| TCAGGCAAGACAACATTGAG+GGG | 0.654617 | 3.1:+73635829 | None:intergenic |
| ACTATTGCTGATGCTGAGAG+TGG | 0.657284 | 3.1:-73635778 | MS.gene057117:CDS |
| ACTCAGGCAAGACAACATTG+AGG | 0.692460 | 3.1:+73635827 | None:intergenic |
| GGGAGCTCAATATCACTAGG+TGG | 0.701034 | 3.1:-73635510 | MS.gene057117:CDS |
| TTGGGGCATTACAACCACAA+AGG | 0.718163 | 3.1:-73635805 | MS.gene057117:CDS |
| GGTGGCCTCACAGAAAACTG+AGG | 0.738213 | 3.1:-73635492 | MS.gene057117:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACAAAACATTAAAAAA+GGG | + | chr3.1:73635012-73635031 | None:intergenic | 10.0% |
| !! | AGTAAAAAACATAAAAAAAT+TGG | + | chr3.1:73635929-73635948 | None:intergenic | 10.0% |
| !! | AAAACAAAACATTAAAAAAG+GGG | + | chr3.1:73635011-73635030 | None:intergenic | 15.0% |
| !! | AAAGAAAAAGAATATTCTTA+AGG | + | chr3.1:73635853-73635872 | None:intergenic | 15.0% |
| !! | ATTAGTTATTTATTGTCAAA+TGG | - | chr3.1:73636271-73636290 | MS.gene057117:intron | 15.0% |
| !! | GAAAAACAAAACATTAAAAA+AGG | + | chr3.1:73635013-73635032 | None:intergenic | 15.0% |
| !! | AGAACATAGAAAAAAAAAGA+AGG | + | chr3.1:73634801-73634820 | None:intergenic | 20.0% |
| !! | TCATGTAAAAATGATTACTT+TGG | + | chr3.1:73635125-73635144 | None:intergenic | 20.0% |
| !!! | TTTTAATGTTAACAGAATCA+TGG | - | chr3.1:73635044-73635063 | MS.gene057117:intron | 20.0% |
| !!! | TTTTTTTTTCTATGTTCTTG+TGG | - | chr3.1:73634803-73634822 | MS.gene057117:intron | 20.0% |
| ! | AAACATTAAAAAAGGGGAAA+CGG | + | chr3.1:73635005-73635024 | None:intergenic | 25.0% |
| ! | AAACCATTATTTACTCTGTT+TGG | - | chr3.1:73635673-73635692 | MS.gene057117:CDS | 25.0% |
| ! | AACTCAAAGAAATCATCAAA+CGG | + | chr3.1:73635078-73635097 | None:intergenic | 25.0% |
| ! | AATCCAAACAGAGTAAATAA+TGG | + | chr3.1:73635679-73635698 | None:intergenic | 25.0% |
| ! | ACAACATAGAATATACCTTA+AGG | + | chr3.1:73635614-73635633 | None:intergenic | 25.0% |
| ! | ACACATCTTATATTCTCTTT+AGG | - | chr3.1:73635952-73635971 | MS.gene057117:CDS | 25.0% |
| ! | CATTTCAAATACATCTACAA+TGG | - | chr3.1:73635977-73635996 | MS.gene057117:CDS | 25.0% |
| ! | TAAAGAGAATATAAGATGTG+TGG | + | chr3.1:73635953-73635972 | None:intergenic | 25.0% |
| ! | TTTCATGTACTTGAAAATGT+GGG | + | chr3.1:73635656-73635675 | None:intergenic | 25.0% |
| !! | ATGATTTCTTTGAGTTTGAT+TGG | - | chr3.1:73635082-73635101 | MS.gene057117:intron | 25.0% |
| !! | TATTCTATGTTGTTTGAGTT+TGG | - | chr3.1:73635621-73635640 | MS.gene057117:CDS | 25.0% |
| !! | TGATTTCTTTGAGTTTGATT+GGG | - | chr3.1:73635083-73635102 | MS.gene057117:intron | 25.0% |
| !! | TTTTGATGTTCCTTTAACAA+TGG | - | chr3.1:73635476-73635495 | MS.gene057117:CDS | 25.0% |
| AAATTATTCTGATCAAGGTG+TGG | + | chr3.1:73635192-73635211 | None:intergenic | 30.0% | |
| AACAAAGATATGACAGGTTA+AGG | + | chr3.1:73634774-73634793 | None:intergenic | 30.0% | |
| AATTATTCTGATCAAGGTGT+GGG | + | chr3.1:73635191-73635210 | None:intergenic | 30.0% | |
| AGAATTGTCATTAGTTCCAT+TGG | - | chr3.1:73635368-73635387 | MS.gene057117:intron | 30.0% | |
| ATGATGAAATCAAGAAGCTT+AGG | - | chr3.1:73636408-73636427 | MS.gene057117:CDS | 30.0% | |
| CATTGAAAGTAGTGATCATA+TGG | + | chr3.1:73634710-73634729 | None:intergenic | 30.0% | |
| CCTCAAAATTATTCTGATCA+AGG | + | chr3.1:73635197-73635216 | None:intergenic | 30.0% | |
| GAATGAAAAACAGAAAAGGA+AGG | + | chr3.1:73634735-73634754 | None:intergenic | 30.0% | |
| GGAAAAAACAAAGATATGAC+AGG | + | chr3.1:73634780-73634799 | None:intergenic | 30.0% | |
| GTTTCATGTACTTGAAAATG+TGG | + | chr3.1:73635657-73635676 | None:intergenic | 30.0% | |
| TATAATGATGTGTTGAAGTG+TGG | - | chr3.1:73634919-73634938 | MS.gene057117:intron | 30.0% | |
| TGGGAATGATAATTGAAACA+TGG | - | chr3.1:73635747-73635766 | MS.gene057117:CDS | 30.0% | |
| TTAGTTTCTTCGATAGTAGA+TGG | - | chr3.1:73636071-73636090 | MS.gene057117:intron | 30.0% | |
| TTCATGTACTTGAAAATGTG+GGG | + | chr3.1:73635655-73635674 | None:intergenic | 30.0% | |
| ! | CCTTGATCAGAATAATTTTG+AGG | - | chr3.1:73635194-73635213 | MS.gene057117:intron | 30.0% |
| ! | TGTACCTTAGACTAAGTTTT+TGG | - | chr3.1:73635712-73635731 | MS.gene057117:CDS | 30.0% |
| !! | CCTTTTGAAAAAAAGATGCA+GGG | - | chr3.1:73635527-73635546 | MS.gene057117:CDS | 30.0% |
| !!! | CCTGCATCTTTTTTTCAAAA+GGG | + | chr3.1:73635529-73635548 | None:intergenic | 30.0% |
| CGTGGAATGAAAAACAGAAA+AGG | + | chr3.1:73634739-73634758 | None:intergenic | 35.0% | |
| CTATGAAACATGACAACTCT+AGG | - | chr3.1:73635798-73635817 | MS.gene057117:CDS | 35.0% | |
| GCTGCTAAGAAAATGAATGT+TGG | - | chr3.1:73635498-73635517 | MS.gene057117:CDS | 35.0% | |
| GTTTCAATTATCATTCCCAG+CGG | + | chr3.1:73635746-73635765 | None:intergenic | 35.0% | |
| TCATCATTCAAATCCATTCC+CGG | + | chr3.1:73636395-73636414 | None:intergenic | 35.0% | |
| TGGACCAAAAACTTAGTCTA+AGG | + | chr3.1:73635719-73635738 | None:intergenic | 35.0% | |
| TGTGAAGAAAGAGAAGGAAT+GGG | - | chr3.1:73635338-73635357 | MS.gene057117:intron | 35.0% | |
| TTCTTAGCAGCCATTGTTAA+AGG | + | chr3.1:73635489-73635508 | None:intergenic | 35.0% | |
| TTGAACATTGTGATACCAGT+TGG | + | chr3.1:73634632-73634651 | None:intergenic | 35.0% | |
| TTGTGAAGAAAGAGAAGGAA+TGG | - | chr3.1:73635337-73635356 | MS.gene057117:intron | 35.0% | |
| TTTCAATTATCATTCCCAGC+GGG | + | chr3.1:73635745-73635764 | None:intergenic | 35.0% | |
| ! | AAAATGTATCGACGCAACAA+TGG | - | chr3.1:73636012-73636031 | MS.gene057117:intron | 35.0% |
| ! | CTTTGTTTCGACACTTAGAT+CGG | - | chr3.1:73635869-73635888 | MS.gene057117:CDS | 35.0% |
| !! | ATTGTTTTGTTGTGTGATGC+AGG | - | chr3.1:73636307-73636326 | MS.gene057117:intron | 35.0% |
| !! | CCCTTTTGAAAAAAAGATGC+AGG | - | chr3.1:73635526-73635545 | MS.gene057117:CDS | 35.0% |
| !!! | CCCTGCATCTTTTTTTCAAA+AGG | + | chr3.1:73635530-73635549 | None:intergenic | 35.0% |
| !!! | TGGTTTTGTGAAGAAAGAGA+AGG | - | chr3.1:73635332-73635351 | MS.gene057117:intron | 35.0% |
| AAGATGTTGGAGAAACTTCC+GGG | - | chr3.1:73636374-73636393 | MS.gene057117:intron | 40.0% | |
| AATGTTGTCTTGCCTGAGTT+GGG | - | chr3.1:73635234-73635253 | MS.gene057117:intron | 40.0% | |
| ACGACACAGACAAGTAAGTA+TGG | - | chr3.1:73634662-73634681 | MS.gene057117:CDS | 40.0% | |
| CACAGACAAGTAAGTATGGT+CGG | - | chr3.1:73634666-73634685 | MS.gene057117:CDS | 40.0% | |
| CATTCTCTTTGTGACTTTCG+AGG | - | chr3.1:73634944-73634963 | MS.gene057117:intron | 40.0% | |
| GAAGATGTTGGAGAAACTTC+CGG | - | chr3.1:73636373-73636392 | MS.gene057117:intron | 40.0% | |
| GCTTCTGTGAAAACTGAAAG+TGG | - | chr3.1:73635312-73635331 | MS.gene057117:intron | 40.0% | |
| GGAGAAGCAAAAGAAGATGT+TGG | - | chr3.1:73636361-73636380 | MS.gene057117:intron | 40.0% | |
| GTACGAGTACTAGCATCATT+AGG | - | chr3.1:73635412-73635431 | MS.gene057117:intron | 40.0% | |
| GTACTAGCATCATTAGGAAG+AGG | - | chr3.1:73635418-73635437 | MS.gene057117:intron | 40.0% | |
| TGTTGTGTGATGCAGGAAAA+GGG | - | chr3.1:73636314-73636333 | MS.gene057117:intron | 40.0% | |
| TTCGAGGTCGATATGGAATT+TGG | - | chr3.1:73634960-73634979 | MS.gene057117:intron | 40.0% | |
| TTGTTGTGTGATGCAGGAAA+AGG | - | chr3.1:73636313-73636332 | MS.gene057117:intron | 40.0% | |
| ! | CTTCTTTTGCTTCTCCAACA+TGG | + | chr3.1:73636357-73636376 | None:intergenic | 40.0% |
| ! | TTAAGGTACTCTACATGTCG+TGG | + | chr3.1:73634757-73634776 | None:intergenic | 40.0% |
| !!! | TTGTCTGTGTCGTTTTGTTG+AGG | + | chr3.1:73634655-73634674 | None:intergenic | 40.0% |
| AAATCACTCAAGGCTCCAAC+TGG | - | chr3.1:73634614-73634633 | MS.gene057117:CDS | 45.0% | |
| ACCCAACCTGAAATCACTCA+AGG | - | chr3.1:73634604-73634623 | MS.gene057117:CDS | 45.0% | |
| ACTATTGCTGATGCTGAGAG+TGG | - | chr3.1:73635279-73635298 | MS.gene057117:intron | 45.0% | |
| ACTCAGGCAAGACAACATTG+AGG | + | chr3.1:73635233-73635252 | None:intergenic | 45.0% | |
| ATGTTGTCTTGCCTGAGTTG+GGG | - | chr3.1:73635235-73635254 | MS.gene057117:intron | 45.0% | |
| CAATGTTGTCTTGCCTGAGT+TGG | - | chr3.1:73635233-73635252 | MS.gene057117:intron | 45.0% | |
| CAGAAAACTGAGGAGCTTGA+TGG | - | chr3.1:73635575-73635594 | MS.gene057117:CDS | 45.0% | |
| CAGCAATAGTCTCACCTTTG+TGG | + | chr3.1:73635269-73635288 | None:intergenic | 45.0% | |
| CTCAGGCAAGACAACATTGA+GGG | + | chr3.1:73635232-73635251 | None:intergenic | 45.0% | |
| CTTGTACTTGGCAATGCCAA+TGG | + | chr3.1:73635387-73635406 | None:intergenic | 45.0% | |
| GACTAAGGAAGTTGCCATGT+TGG | - | chr3.1:73636340-73636359 | MS.gene057117:intron | 45.0% | |
| GCAGGAAAAGGGTTTGACTA+AGG | - | chr3.1:73636325-73636344 | MS.gene057117:intron | 45.0% | |
| GGTACTCATCGACAACCTTA+AGG | - | chr3.1:73635596-73635615 | MS.gene057117:CDS | 45.0% | |
| TATTCTGATCAAGGTGTGGG+AGG | + | chr3.1:73635188-73635207 | None:intergenic | 45.0% | |
| TCAGGCAAGACAACATTGAG+GGG | + | chr3.1:73635231-73635250 | None:intergenic | 45.0% | |
| TGTGACTTTCGAGGTCGATA+TGG | - | chr3.1:73634953-73634972 | MS.gene057117:intron | 45.0% | |
| TTGGAGCCTTGAGTGATTTC+AGG | + | chr3.1:73634613-73634632 | None:intergenic | 45.0% | |
| ! | AAGCTCCTCAGTTTTCTGTG+AGG | + | chr3.1:73635573-73635592 | None:intergenic | 45.0% |
| ! | AGCCTTGAGTGATTTCAGGT+TGG | + | chr3.1:73634609-73634628 | None:intergenic | 45.0% |
| ! | CTCGTACTGCTACTTGTACT+TGG | + | chr3.1:73635399-73635418 | None:intergenic | 45.0% |
| ! | TTGGGGCATTACAACCACAA+AGG | - | chr3.1:73635252-73635271 | MS.gene057117:intron | 45.0% |
| !! | GCCTTGAGTGATTTCAGGTT+GGG | + | chr3.1:73634608-73634627 | None:intergenic | 45.0% |
| GCAGGGAGCTCAATATCACT+AGG | - | chr3.1:73635544-73635563 | MS.gene057117:CDS | 50.0% | |
| GGGAGCTCAATATCACTAGG+TGG | - | chr3.1:73635547-73635566 | MS.gene057117:CDS | 50.0% | |
| GTTGGAGAAACTTCCGGGAA+TGG | - | chr3.1:73636379-73636398 | MS.gene057117:intron | 50.0% | |
| TGGTTGTAATGCCCCAACTC+AGG | + | chr3.1:73635249-73635268 | None:intergenic | 50.0% | |
| TTATCATTCCCAGCGGGTCA+TGG | + | chr3.1:73635739-73635758 | None:intergenic | 50.0% | |
| !! | TTTTTGGTCCATGACCCGCT+GGG | - | chr3.1:73635728-73635747 | MS.gene057117:CDS | 50.0% |
| GGTGGCCTCACAGAAAACTG+AGG | - | chr3.1:73635565-73635584 | MS.gene057117:CDS | 55.0% | |
| !!! | GTTTTTGGTCCATGACCCGC+TGG | - | chr3.1:73635727-73635746 | MS.gene057117:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73634592 | 73636487 | 73634592 | ID=MS.gene057117 |
| chr3.1 | mRNA | 73634592 | 73636487 | 73634592 | ID=MS.gene057117.t1;Parent=MS.gene057117 |
| chr3.1 | exon | 73636405 | 73636487 | 73636405 | ID=MS.gene057117.t1.exon1;Parent=MS.gene057117.t1 |
| chr3.1 | CDS | 73636405 | 73636487 | 73636405 | ID=cds.MS.gene057117.t1;Parent=MS.gene057117.t1 |
| chr3.1 | exon | 73635462 | 73636020 | 73635462 | ID=MS.gene057117.t1.exon2;Parent=MS.gene057117.t1 |
| chr3.1 | CDS | 73635462 | 73636020 | 73635462 | ID=cds.MS.gene057117.t1;Parent=MS.gene057117.t1 |
| chr3.1 | exon | 73634592 | 73634750 | 73634592 | ID=MS.gene057117.t1.exon3;Parent=MS.gene057117.t1 |
| chr3.1 | CDS | 73634592 | 73634750 | 73634592 | ID=cds.MS.gene057117.t1;Parent=MS.gene057117.t1 |
| Gene Sequence |
| Protein sequence |
