AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057268

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057268.t1 MTR_3g093040 92.093 215 17 0 27 241 98 312 3.26e-149 418
MS.gene057268.t1 MTR_3g093040 64.000 50 10 1 1 50 1 42 3.09e-11 62.4
MS.gene057268.t1 MTR_3g093050 83.562 219 29 1 29 240 14 232 2.86e-130 380
MS.gene057268.t1 MTR_3g093050 83.562 219 29 1 29 240 14 232 7.08e-130 380
MS.gene057268.t1 MTR_5g069030 69.545 220 60 1 28 240 16 235 1.16e-110 331
MS.gene057268.t1 MTR_3g064580 52.308 195 88 3 36 227 5 197 1.97e-60 201
MS.gene057268.t1 MTR_5g076850 52.850 193 83 3 36 228 5 189 2.48e-60 201
MS.gene057268.t1 MTR_6g477900 46.296 216 100 2 37 240 6 217 3.02e-59 187
MS.gene057268.t1 MTR_2g064090 47.739 199 84 5 36 228 5 189 2.07e-57 186
MS.gene057268.t1 MTR_2g086880 49.718 177 76 3 25 196 6 174 6.48e-56 186
MS.gene057268.t1 MTR_2g086880 49.718 177 76 3 25 196 6 174 1.42e-55 187
MS.gene057268.t1 MTR_3g070030 44.949 198 102 3 37 229 19 214 8.23e-54 177
MS.gene057268.t1 MTR_5g014300 47.264 201 87 5 36 224 5 198 1.74e-53 176
MS.gene057268.t1 MTR_5g012080 50.318 157 75 3 33 187 3 158 1.74e-53 176
MS.gene057268.t1 MTR_4g036030 52.500 160 71 4 29 187 1 156 6.73e-53 174
MS.gene057268.t1 MTR_4g101680 47.929 169 83 3 29 196 1 165 2.87e-52 173
MS.gene057268.t1 MTR_8g023860 53.548 155 63 4 33 184 8 156 3.52e-51 172
MS.gene057268.t1 MTR_8g023840 56.291 151 57 5 37 184 11 155 1.37e-50 170
MS.gene057268.t1 MTR_4g098630 51.829 164 74 3 36 195 5 167 3.39e-50 166
MS.gene057268.t1 MTR_5g021710 46.667 180 92 3 35 212 6 183 8.51e-50 166
MS.gene057268.t1 MTR_8g076110 47.403 154 78 2 35 187 4 155 1.10e-49 165
MS.gene057268.t1 MTR_0036s0150 53.503 157 70 3 33 188 2 156 1.26e-49 170
MS.gene057268.t1 MTR_1g090720 51.875 160 71 1 36 189 41 200 3.15e-49 168
MS.gene057268.t1 MTR_3g096140 48.649 148 76 0 40 187 10 157 3.24e-49 163
MS.gene057268.t1 MTR_8g063550 48.649 148 76 0 40 187 9 156 8.75e-49 164
MS.gene057268.t1 MTR_1g097300 51.613 155 74 1 34 188 17 170 1.29e-48 168
MS.gene057268.t1 MTR_1g090723 53.333 150 69 1 40 188 11 160 2.31e-48 168
MS.gene057268.t1 MTR_1g090723 54.000 150 67 2 40 188 11 159 2.76e-48 167
MS.gene057268.t1 MTR_1g096430 50.000 152 73 2 37 187 7 156 3.02e-48 162
MS.gene057268.t1 MTR_8g063550 48.649 148 76 0 40 187 9 156 4.76e-48 164
MS.gene057268.t1 MTR_3g096140 48.649 148 76 0 40 187 10 157 5.43e-48 162
MS.gene057268.t1 MTR_1g090723 54.000 150 67 2 40 188 11 159 5.79e-48 167
MS.gene057268.t1 MTR_4g035590 47.531 162 79 3 30 189 1 158 5.94e-48 162
MS.gene057268.t1 MTR_8g063550 48.649 148 76 0 40 187 9 156 5.97e-48 164
MS.gene057268.t1 MTR_2g062730 47.436 156 78 3 36 189 9 162 2.76e-47 160
MS.gene057268.t1 MTR_3g435150 43.868 212 96 5 37 229 16 223 3.38e-47 158
MS.gene057268.t1 MTR_6g084430 49.673 153 73 2 36 188 4 152 7.56e-47 158
MS.gene057268.t1 MTR_8g023900 48.619 181 80 6 30 201 3 179 8.18e-47 161
MS.gene057268.t1 MTR_8g023900 45.349 172 81 5 39 203 195 360 2.08e-41 147
MS.gene057268.t1 MTR_7g011120 42.079 202 104 3 40 230 11 210 8.36e-47 157
MS.gene057268.t1 MTR_2g079990 48.734 158 75 3 36 191 15 168 1.23e-46 158
MS.gene057268.t1 MTR_3g109340 53.896 154 66 3 36 187 21 171 1.33e-46 158
MS.gene057268.t1 MTR_4g108760 51.299 154 71 2 37 188 17 168 1.78e-46 158
MS.gene057268.t1 MTR_3g109340 53.247 154 66 3 36 187 21 170 4.73e-46 157
MS.gene057268.t1 MTR_8g023930 45.977 174 81 5 37 203 24 191 1.37e-45 158
MS.gene057268.t1 MTR_7g011130 40.553 217 111 3 40 240 22 236 1.42e-45 155
MS.gene057268.t1 MTR_6g012670 49.091 165 73 3 37 199 20 175 4.59e-45 153
MS.gene057268.t1 MTR_4g081870 46.061 165 79 3 29 187 1 161 4.80e-45 152
MS.gene057268.t1 MTR_8g093580 45.270 148 81 0 40 187 9 156 3.64e-44 155
MS.gene057268.t1 MTR_8g059170 48.428 159 76 3 36 191 13 168 4.40e-44 151
MS.gene057268.t1 MTR_8g467490 43.636 165 80 4 40 193 17 179 5.83e-44 152
MS.gene057268.t1 MTR_1g008740 50.968 155 70 4 36 187 12 163 6.18e-44 151
MS.gene057268.t1 MTR_1g008740 50.641 156 71 4 36 188 26 178 6.39e-44 151
MS.gene057268.t1 MTR_7g085220 40.777 206 96 5 37 222 8 207 8.32e-44 150
MS.gene057268.t1 MTR_2g078700 48.765 162 67 4 37 189 23 177 8.35e-44 152
MS.gene057268.t1 MTR_8g024480 42.458 179 92 3 37 204 15 193 8.90e-44 153
MS.gene057268.t1 MTR_5g041940 46.061 165 81 3 37 195 3 165 2.10e-43 147
MS.gene057268.t1 MTR_7g005280 47.712 153 71 3 37 187 15 160 3.10e-43 147
MS.gene057268.t1 MTR_3g070040 47.305 167 72 4 37 199 8 162 7.17e-43 148
MS.gene057268.t1 MTR_3g088110 46.154 156 74 4 37 187 7 157 1.20e-42 146
MS.gene057268.t1 MTR_8g099750 42.697 178 87 4 25 193 2 173 1.41e-42 144
MS.gene057268.t1 MTR_2g079990 41.398 186 75 3 36 191 15 196 1.81e-42 148
MS.gene057268.t1 MTR_5g040420 42.073 164 83 4 40 193 17 178 2.26e-42 148
MS.gene057268.t1 MTR_3g096920 46.497 157 72 5 37 187 7 157 2.28e-42 145
MS.gene057268.t1 MTR_2g080010 42.515 167 81 3 36 189 14 178 4.68e-42 146
MS.gene057268.t1 MTR_4g134460 46.309 149 75 3 40 187 57 201 5.10e-42 148
MS.gene057268.t1 MTR_8g094580 45.860 157 74 4 37 187 7 158 6.35e-42 144
MS.gene057268.t1 MTR_3g116070 41.294 201 103 6 37 232 23 213 1.69e-41 145
MS.gene057268.t1 MTR_2157s0010 43.976 166 75 5 37 188 8 169 2.35e-41 142
MS.gene057268.t1 MTR_3g096140 46.667 135 72 0 53 187 2 136 6.78e-41 143
MS.gene057268.t1 MTR_7g100990 39.583 192 97 4 37 211 11 200 7.65e-41 142
MS.gene057268.t1 MTR_6g032770 45.223 157 80 3 37 189 18 172 1.07e-40 143
MS.gene057268.t1 MTR_3g096920 50.394 127 60 2 37 163 7 130 1.12e-40 142
MS.gene057268.t1 MTR_2g064470 41.969 193 89 7 37 215 11 194 1.27e-40 141
MS.gene057268.t1 MTR_1g069805 46.104 154 75 3 36 187 9 156 2.45e-40 140
MS.gene057268.t1 MTR_4g089135 41.667 180 78 4 37 191 15 192 2.70e-40 141
MS.gene057268.t1 MTR_7g085260 48.101 158 74 3 37 188 17 172 4.26e-40 142
MS.gene057268.t1 MTR_6g011860 42.236 161 81 3 40 190 18 176 7.17e-40 141
MS.gene057268.t1 MTR_2g093810 41.209 182 88 5 36 207 13 185 1.16e-38 137
MS.gene057268.t1 MTR_7g097090 46.053 152 74 3 36 185 9 154 5.43e-38 134
MS.gene057268.t1 MTR_8g023880 46.471 170 62 8 36 187 6 164 1.02e-37 133
MS.gene057268.t1 MTR_4g075980 44.516 155 75 4 36 187 15 161 3.32e-37 132
MS.gene057268.t1 MTR_3g098810 40.449 178 92 3 26 193 3 176 5.59e-37 130
MS.gene057268.t1 MTR_3g098810 43.662 142 72 2 26 163 3 140 4.68e-35 123
MS.gene057268.t1 MTR_5g090970 42.500 160 78 5 40 187 21 178 3.46e-34 125
MS.gene057268.t1 MTR_2g086690 40.385 156 85 5 38 185 5 160 1.18e-33 122
MS.gene057268.t1 MTR_5g090970 42.500 160 77 5 40 187 21 177 1.41e-33 123
MS.gene057268.t1 MTR_4g052620 40.127 157 85 5 37 185 5 160 1.88e-33 122
MS.gene057268.t1 MTR_2g068880 41.071 168 82 5 37 188 21 187 2.97e-33 122
MS.gene057268.t1 MTR_2g068920 40.000 170 85 5 35 188 18 186 9.82e-33 120
MS.gene057268.t1 MTR_7g105170 35.758 165 96 5 34 188 1 165 1.25e-30 114
MS.gene057268.t1 MTR_8g094580 48.039 102 44 3 92 187 6 104 5.43e-25 99.0
MS.gene057268.t1 MTR_4g094302 31.481 162 93 4 37 190 11 162 9.46e-23 92.0
MS.gene057268.t1 MTR_4g094302 36.434 129 70 3 37 163 11 129 3.07e-22 89.7
MS.gene057268.t1 MTR_7g070140 46.835 79 40 1 87 163 12 90 2.79e-19 81.3
MS.gene057268.t1 MTR_7g083330 33.071 127 81 3 37 162 18 141 7.64e-15 70.9
MS.gene057268.t1 MTR_7g083360 32.283 127 82 3 37 162 10 133 2.58e-14 68.6
MS.gene057268.t1 MTR_3g096400 30.247 162 93 4 37 186 7 160 3.50e-14 69.3
MS.gene057268.t1 MTR_8g093790 30.464 151 83 6 37 187 10 138 4.31e-14 68.9
MS.gene057268.t1 MTR_7g070150 41.176 68 37 1 135 202 8 72 5.50e-13 63.5
MS.gene057268.t1 MTR_2g014680 29.605 152 86 6 34 168 50 197 2.08e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057268.t1 AT4G35580 62.376 202 73 1 29 227 1 202 1.64e-85 263
MS.gene057268.t1 AT4G35580 62.376 202 73 1 29 227 1 202 2.48e-85 263
MS.gene057268.t1 AT4G35580 62.376 202 73 1 29 227 1 202 2.54e-85 263
MS.gene057268.t1 AT1G33060 64.948 194 62 2 20 207 1 194 5.57e-85 266
MS.gene057268.t1 AT1G33060 64.948 194 62 2 20 207 1 194 5.80e-85 265
MS.gene057268.t1 AT5G24590 57.820 211 78 4 26 235 2 202 1.26e-79 246
MS.gene057268.t1 AT3G49530 58.376 197 76 2 31 226 7 198 4.34e-79 243
MS.gene057268.t1 AT3G49530 58.376 197 76 2 31 226 7 198 6.23e-79 245
MS.gene057268.t1 AT1G65910 54.438 169 77 0 36 204 5 173 1.29e-60 201
MS.gene057268.t1 AT3G17730 52.514 179 80 1 37 210 6 184 4.76e-60 189
MS.gene057268.t1 AT5G17260 59.477 153 61 1 36 187 5 157 1.14e-57 190
MS.gene057268.t1 AT3G03200 58.824 153 62 1 36 187 5 157 1.59e-56 187
MS.gene057268.t1 AT3G10490 54.487 156 70 1 35 189 25 180 2.05e-55 177
MS.gene057268.t1 AT3G10480 53.125 160 75 0 30 189 20 179 1.37e-54 181
MS.gene057268.t1 AT1G54330 54.902 153 66 1 36 188 5 154 1.50e-54 177
MS.gene057268.t1 AT3G10480 53.988 163 70 2 30 189 20 180 1.91e-54 181
MS.gene057268.t1 AT3G10490 54.839 155 69 1 36 189 26 180 4.80e-54 180
MS.gene057268.t1 AT3G10500 54.487 156 71 0 33 188 5 160 8.16e-54 182
MS.gene057268.t1 AT1G12260 51.923 156 72 3 33 187 3 156 6.44e-53 174
MS.gene057268.t1 AT4G17980 43.590 234 102 7 35 240 4 235 7.84e-53 172
MS.gene057268.t1 AT1G12260 51.923 156 72 3 33 187 3 156 1.53e-52 175
MS.gene057268.t1 AT5G04410 52.564 156 74 0 33 188 5 160 2.67e-52 178
MS.gene057268.t1 AT1G62700 51.282 156 73 3 33 187 3 156 3.15e-52 174
MS.gene057268.t1 AT1G62700 51.282 156 73 3 33 187 3 156 3.15e-52 174
MS.gene057268.t1 AT4G17980 43.590 234 102 7 35 240 4 235 3.45e-52 171
MS.gene057268.t1 AT5G46590 54.777 157 65 3 37 189 6 160 9.20e-52 170
MS.gene057268.t1 AT5G62380 47.879 165 83 2 33 196 3 165 2.96e-51 170
MS.gene057268.t1 AT5G62380 47.879 165 83 2 33 196 3 165 2.96e-51 170
MS.gene057268.t1 AT2G27300 50.625 160 71 3 30 189 7 158 3.43e-51 170
MS.gene057268.t1 AT2G18060 50.980 153 72 2 36 187 8 158 1.15e-50 169
MS.gene057268.t1 AT2G18060 50.980 153 72 2 36 187 8 158 1.15e-50 169
MS.gene057268.t1 AT4G10350 47.531 162 84 1 29 189 1 162 5.51e-50 167
MS.gene057268.t1 AT3G44290 51.656 151 64 3 40 190 17 158 5.89e-50 163
MS.gene057268.t1 AT5G66300 49.673 153 75 2 36 187 11 162 1.58e-49 164
MS.gene057268.t1 AT4G36160 49.020 153 75 2 36 187 9 159 2.94e-49 166
MS.gene057268.t1 AT4G36160 49.020 153 75 2 36 187 9 159 2.94e-49 166
MS.gene057268.t1 AT4G36160 49.020 153 75 2 36 187 13 163 3.62e-49 166
MS.gene057268.t1 AT5G22290 50.993 151 66 3 40 190 24 166 5.48e-49 164
MS.gene057268.t1 AT1G33280 50.000 154 73 2 37 189 8 158 7.90e-49 162
MS.gene057268.t1 AT5G46590 59.375 128 51 1 37 163 6 133 1.07e-48 162
MS.gene057268.t1 AT3G44290 51.656 151 64 3 40 190 17 158 1.30e-48 163
MS.gene057268.t1 AT1G71930 49.673 153 74 2 36 187 8 158 2.92e-48 162
MS.gene057268.t1 AT1G71930 49.673 153 74 2 36 187 8 158 2.92e-48 162
MS.gene057268.t1 AT3G10480 44.898 196 70 3 30 189 20 213 7.68e-48 165
MS.gene057268.t1 AT3G18400 50.980 153 70 3 37 188 5 153 8.87e-48 160
MS.gene057268.t1 AT2G33480 51.656 151 68 1 37 187 15 160 1.21e-47 159
MS.gene057268.t1 AT5G07680 43.069 202 89 5 37 219 3 197 2.60e-47 159
MS.gene057268.t1 AT5G61430 50.649 154 72 2 37 188 16 167 3.06e-47 159
MS.gene057268.t1 AT5G07680 43.069 202 89 5 37 219 17 211 3.59e-47 159
MS.gene057268.t1 AT5G39610 50.000 160 76 2 37 194 20 177 1.38e-46 156
MS.gene057268.t1 AT1G69490 39.713 209 115 4 29 233 1 202 1.49e-46 155
MS.gene057268.t1 AT4G27410 45.402 174 88 2 36 204 13 184 1.57e-46 156
MS.gene057268.t1 AT2G24430 50.633 158 73 3 36 191 15 169 1.87e-46 157
MS.gene057268.t1 AT2G24430 50.633 158 73 3 36 191 15 169 1.87e-46 157
MS.gene057268.t1 AT2G33480 51.656 151 66 2 37 187 15 158 2.17e-46 155
MS.gene057268.t1 AT1G32510 47.273 165 79 2 37 193 6 170 4.08e-46 155
MS.gene057268.t1 AT1G34180 51.007 149 73 0 40 188 19 167 8.85e-46 158
MS.gene057268.t1 AT1G32770 37.104 221 126 4 25 234 4 222 1.80e-45 155
MS.gene057268.t1 AT1G34180 51.007 149 73 0 40 188 19 167 3.38e-45 159
MS.gene057268.t1 AT2G46770 43.575 179 84 4 28 189 4 182 3.46e-45 155
MS.gene057268.t1 AT5G64060 46.104 154 83 0 35 188 4 157 3.51e-45 155
MS.gene057268.t1 AT3G15500 50.000 154 71 3 36 187 13 162 1.23e-44 152
MS.gene057268.t1 AT5G09330 48.322 149 77 0 40 188 9 157 1.66e-44 155
MS.gene057268.t1 AT5G09330 48.322 149 77 0 40 188 9 157 1.66e-44 155
MS.gene057268.t1 AT5G09330 48.322 149 77 0 40 188 9 157 1.66e-44 155
MS.gene057268.t1 AT5G09330 48.322 149 77 0 40 188 9 157 1.66e-44 155
MS.gene057268.t1 AT5G09330 48.322 149 77 0 40 188 9 157 1.66e-44 155
MS.gene057268.t1 AT3G29035 57.480 127 52 1 37 163 24 148 1.89e-44 152
MS.gene057268.t1 AT1G34190 51.678 149 72 0 40 188 19 167 2.25e-44 156
MS.gene057268.t1 AT3G15170 49.068 161 66 4 37 188 20 173 3.12e-44 151
MS.gene057268.t1 AT1G52890 48.734 158 75 3 36 191 13 166 3.43e-44 151
MS.gene057268.t1 AT1G76420 49.673 153 72 3 37 187 22 171 7.13e-44 150
MS.gene057268.t1 AT3G04060 45.198 177 82 4 37 205 20 189 8.69e-44 150
MS.gene057268.t1 AT5G08790 42.623 183 93 4 37 212 7 184 9.71e-44 149
MS.gene057268.t1 AT2G02450 49.333 150 69 4 40 187 54 198 1.31e-43 151
MS.gene057268.t1 AT4G27410 42.328 189 89 2 36 204 13 201 1.49e-43 149
MS.gene057268.t1 AT2G02450 49.333 150 69 4 40 187 54 198 1.92e-43 151
MS.gene057268.t1 AT5G18270 49.689 161 76 3 34 191 18 176 2.26e-43 149
MS.gene057268.t1 AT5G18270 49.068 161 77 3 34 191 18 176 6.54e-43 148
MS.gene057268.t1 AT1G01720 46.250 160 75 4 34 187 4 158 8.37e-43 147
MS.gene057268.t1 AT1G56010 41.538 195 94 6 37 216 19 208 9.52e-43 147
MS.gene057268.t1 AT3G61910 43.114 167 81 2 37 189 11 177 1.05e-42 147
MS.gene057268.t1 AT3G12977 44.509 173 90 5 24 194 6 174 1.09e-42 146
MS.gene057268.t1 AT3G04070 41.361 191 92 6 35 207 8 196 1.19e-42 148
MS.gene057268.t1 AT5G13180 43.636 165 85 3 25 187 2 160 1.49e-42 145
MS.gene057268.t1 AT1G34180 47.205 161 73 1 40 188 19 179 2.58e-42 149
MS.gene057268.t1 AT5G53950 49.068 161 66 4 37 188 17 170 3.71e-42 147
MS.gene057268.t1 AT1G34180 47.205 161 73 1 40 188 19 179 7.60e-42 150
MS.gene057268.t1 AT1G79580 45.570 158 79 4 36 190 16 169 1.25e-41 145
MS.gene057268.t1 AT1G79580 45.570 158 79 4 36 190 16 169 1.25e-41 145
MS.gene057268.t1 AT1G79580 45.570 158 79 4 36 190 16 169 1.25e-41 145
MS.gene057268.t1 AT1G79580 45.570 158 79 4 36 190 16 169 1.25e-41 145
MS.gene057268.t1 AT1G79580 45.570 158 79 4 36 190 16 169 1.25e-41 145
MS.gene057268.t1 AT1G77450 44.231 156 77 4 37 187 10 160 1.26e-41 142
MS.gene057268.t1 AT5G63790 45.283 159 75 4 36 187 49 202 1.60e-41 144
MS.gene057268.t1 AT5G63790 45.283 159 75 4 36 187 59 212 1.75e-41 144
MS.gene057268.t1 AT1G26870 41.104 163 83 3 40 191 19 179 3.63e-41 145
MS.gene057268.t1 AT2G43000 42.581 155 85 3 35 187 15 167 1.02e-40 141
MS.gene057268.t1 AT3G15510 42.012 169 83 3 41 196 21 187 1.88e-40 142
MS.gene057268.t1 AT1G61110 44.242 165 77 4 37 188 16 178 2.40e-40 141
MS.gene057268.t1 AT3G04070 39.130 207 90 7 35 207 8 212 2.82e-40 142
MS.gene057268.t1 AT5G39820 41.040 173 77 5 40 189 23 193 3.57e-40 141
MS.gene057268.t1 AT2G17040 45.695 151 72 3 40 187 9 152 3.67e-40 139
MS.gene057268.t1 AT5G04395 46.479 142 62 2 35 162 26 167 1.77e-38 132
MS.gene057268.t1 AT4G28530 38.288 222 106 6 37 233 10 225 2.00e-38 137
MS.gene057268.t1 AT1G32870 46.429 168 86 2 23 188 32 197 6.19e-38 139
MS.gene057268.t1 AT1G32870 49.351 154 74 2 37 188 10 161 1.01e-37 138
MS.gene057268.t1 AT1G32870 49.351 154 74 2 37 188 10 161 1.10e-37 138
MS.gene057268.t1 AT4G01550 44.872 156 77 3 39 190 6 156 2.09e-34 128
MS.gene057268.t1 AT1G52880 42.945 163 79 4 41 191 21 181 2.86e-34 125
MS.gene057268.t1 AT1G02230 39.181 171 89 7 38 202 4 165 6.27e-34 125
MS.gene057268.t1 AT4G01520 40.491 163 86 5 38 195 5 161 8.15e-33 121
MS.gene057268.t1 AT5G22380 35.260 173 105 4 35 200 3 175 1.64e-31 116
MS.gene057268.t1 AT4G01540 39.506 162 87 5 39 195 6 161 5.58e-31 118
MS.gene057268.t1 AT4G01540 39.506 162 87 5 39 195 6 161 8.44e-31 118
MS.gene057268.t1 AT4G01540 39.506 162 87 5 39 195 6 161 9.70e-31 118
MS.gene057268.t1 AT3G12910 37.427 171 83 5 40 191 24 189 9.95e-31 115
MS.gene057268.t1 AT4G01540 39.506 162 87 5 39 195 6 161 1.23e-30 118
MS.gene057268.t1 AT3G12977 50.000 102 50 1 94 194 20 121 1.62e-30 113
MS.gene057268.t1 AT5G61430 51.923 104 48 1 87 188 1 104 2.72e-30 114
MS.gene057268.t1 AT4G10350 48.454 97 50 0 93 189 19 115 6.31e-30 113
MS.gene057268.t1 AT3G44350 37.500 160 95 4 37 191 5 164 1.11e-29 111
MS.gene057268.t1 AT3G04420 39.490 157 82 4 38 189 4 152 1.56e-29 112
MS.gene057268.t1 AT3G04420 39.490 157 82 4 38 189 4 152 1.84e-29 113
MS.gene057268.t1 AT2G33480 48.544 103 53 0 85 187 1 103 3.39e-29 109
MS.gene057268.t1 AT1G02250 37.714 175 94 7 38 205 4 170 4.07e-29 112
MS.gene057268.t1 AT3G44350 41.221 131 73 3 37 163 5 135 1.99e-28 105
MS.gene057268.t1 AT1G01010 38.650 163 83 5 39 191 5 160 4.68e-27 108
MS.gene057268.t1 AT1G56010 42.336 137 62 4 94 216 8 141 5.18e-27 105
MS.gene057268.t1 AT3G10490 62.500 80 29 1 111 189 1 80 5.42e-27 106
MS.gene057268.t1 AT3G10490 62.500 80 29 1 111 189 1 80 5.42e-27 106
MS.gene057268.t1 AT1G02220 38.411 151 81 4 38 185 4 145 6.15e-25 102
MS.gene057268.t1 AT2G18060 55.714 70 29 1 118 187 3 70 1.57e-21 90.9
MS.gene057268.t1 AT4G28530 44.037 109 43 2 37 129 10 116 4.62e-20 87.4
MS.gene057268.t1 AT5G22290 52.703 74 28 2 117 190 1 67 1.39e-18 82.0
MS.gene057268.t1 AT5G64530 33.333 129 70 4 36 162 2 116 1.39e-17 77.4
MS.gene057268.t1 AT2G43000 43.182 88 45 3 103 187 4 89 1.93e-17 78.2
MS.gene057268.t1 AT5G64530 28.402 169 91 5 36 188 2 156 1.94e-17 77.8
MS.gene057268.t1 AT3G56530 28.947 152 103 3 36 185 51 199 1.85e-16 77.4
MS.gene057268.t1 AT3G55210 29.630 162 96 5 37 185 11 167 7.00e-16 75.5
MS.gene057268.t1 AT3G04430 34.559 136 75 5 43 166 6 139 5.72e-15 71.6
MS.gene057268.t1 AT5G50820 30.714 140 79 5 32 163 8 137 8.42e-13 65.5
MS.gene057268.t1 AT4G28500 31.081 148 80 8 34 163 56 199 2.70e-12 65.5
MS.gene057268.t1 AT5G14000 28.906 128 85 2 37 162 15 138 5.40e-12 62.4
MS.gene057268.t1 AT1G28470 30.612 147 81 6 34 163 74 216 1.47e-11 63.5

Find 78 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACGGGAGGAGGTCTAAT+TGG 0.260288 3.2:-78234474 MS.gene057268:CDS
TGATCGGATTGTATTTCTTC+TGG 0.268816 3.2:+78234208 None:intergenic
CACCACAGTTTGAAACTTCA+AGG 0.314433 3.2:+78234254 None:intergenic
CGGCAATGGTGACGAGGTTC+AGG 0.330226 3.2:-78235255 MS.gene057268:CDS
TGGTTCCATCAAGCTCCTTA+AGG 0.335266 3.2:+78234428 None:intergenic
CTGTTCAATTGATTCCCATT+TGG 0.340310 3.2:+78234607 None:intergenic
CTCTGAGATACCAGGGATAA+TGG 0.352390 3.2:+78234132 None:intergenic
TACCTTCGTTCAAAGATTAA+CGG 0.367630 3.2:-78235275 MS.gene057268:CDS
AAATCTGGAACCATCTTGAT+TGG 0.370088 3.2:-78234535 MS.gene057268:CDS
GAGAAACAAATCTTGGATAC+TGG 0.371022 3.2:-78234585 MS.gene057268:CDS
CTTGGATACTGGAAGGCAAC+AGG 0.379088 3.2:-78234574 MS.gene057268:CDS
ATTTGCAGACATCGATTTCT+CGG 0.380065 3.2:+78235228 None:intergenic
AAGGATCGTAAAATCAAATC+TGG 0.393585 3.2:-78234550 MS.gene057268:CDS
GGTTCCATCAAGCTCCTTAA+GGG 0.401742 3.2:+78234429 None:intergenic
CTCATGCTACTATGCTACTT+GGG 0.405033 3.2:-78237009 MS.gene057268:CDS
CCCACCCTTAAGGAGCTTGA+TGG 0.417142 3.2:-78234433 MS.gene057268:CDS
CCTCATCCGTAGGTCGGAAT+CGG 0.430430 3.2:+78235312 None:intergenic
GAGAAATCGATGTCTGCAAA+TGG 0.434739 3.2:-78235226 MS.gene057268:CDS
TTGAACAGAGAAACAAATCT+TGG 0.440140 3.2:-78234592 MS.gene057268:CDS
TATAGAGAATGGACCTGTCC+TGG 0.443846 3.2:+78234403 None:intergenic
CTCTGAATTCGCTTCCGCTA+GGG 0.457860 3.2:-78235337 MS.gene057268:CDS
CAGGATCGGCAATATCCAAA+TGG 0.459432 3.2:-78234622 MS.gene057268:CDS
TCTCTGAATTCGCTTCCGCT+AGG 0.459745 3.2:-78235338 MS.gene057268:CDS
GGGCTGCAAAGTTGCTCAAT+CGG 0.460596 3.2:-78236988 MS.gene057268:CDS
CGAGTATCGTCCCACCCTTA+AGG 0.461017 3.2:-78234443 MS.gene057268:CDS
ACATTGGTCGTGCACCTAAC+GGG 0.464123 3.2:-78234489 MS.gene057268:CDS
TAACGGGAGGAGGTCTAATT+GGG 0.468912 3.2:-78234473 MS.gene057268:CDS
GCTCATGCTACTATGCTACT+TGG 0.470404 3.2:-78237010 MS.gene057268:CDS
AACTGTAATGGGAGCTTGAT+CGG 0.483644 3.2:+78234192 None:intergenic
TACATTGGTCGTGCACCTAA+CGG 0.487095 3.2:-78234490 MS.gene057268:CDS
AAGCAGCTGGCCATTATCCC+TGG 0.495297 3.2:-78234142 MS.gene057268:CDS
GTGGTTCTTCTTCTATCCAC+AGG 0.505437 3.2:-78234641 MS.gene057268:CDS
CAATTAGACCTCCTCCCGTT+AGG 0.505976 3.2:+78234475 None:intergenic
AGAAATACCGGGCATATCCC+AGG 0.509187 3.2:+78235199 None:intergenic
CTGTGATGTTGAAACTGTAA+TGG 0.513575 3.2:+78234180 None:intergenic
AATCTGGAACCATCTTGATT+GGG 0.516096 3.2:-78234534 MS.gene057268:CDS
AGAAATCGATGTCTGCAAAT+GGG 0.517216 3.2:-78235225 MS.gene057268:CDS
GAAGTTTCAAACTGTGGTGA+AGG 0.519573 3.2:-78234250 MS.gene057268:CDS
CCGATTCCGACCTACGGATG+AGG 0.523382 3.2:-78235312 MS.gene057268:CDS
AAGTTTCAAACTGTGGTGAA+GGG 0.526196 3.2:-78234249 MS.gene057268:CDS
CTTCTTCATCCCAATCAAGA+TGG 0.530609 3.2:+78234525 None:intergenic
TGTGATGTTGAAACTGTAAT+GGG 0.530645 3.2:+78234181 None:intergenic
AGGATCGGCAATATCCAAAT+GGG 0.531502 3.2:-78234621 MS.gene057268:CDS
ATGTCTGCAAATGGGAACCC+TGG 0.541418 3.2:-78235217 MS.gene057268:CDS
CAGAGAAGAGGATAAGCAGC+TGG 0.546645 3.2:-78234155 MS.gene057268:CDS
AAAGTTAATGGCAGAATGCA+TGG 0.551199 3.2:-78237046 None:intergenic
CGTTCAAAGATTAACGGCAA+TGG 0.564311 3.2:-78235269 MS.gene057268:CDS
TCCATCAAGCTCCTTAAGGG+TGG 0.570617 3.2:+78234432 None:intergenic
ATAGAGAATGGACCTGTCCT+GGG 0.571682 3.2:+78234404 None:intergenic
TGATGGAACCAACCCAGGAC+AGG 0.574453 3.2:-78234416 MS.gene057268:intron
CATTACAGTTTCAACATCAC+AGG 0.574812 3.2:-78234179 MS.gene057268:CDS
TGGGAACCCTGGGATATGCC+CGG 0.576567 3.2:-78235206 MS.gene057268:intron
TCTATAAGTTCCTCATCCGT+AGG 0.579136 3.2:+78235302 None:intergenic
TGTCTGCAAATGGGAACCCT+GGG 0.583473 3.2:-78235216 MS.gene057268:CDS
TTTGGATATTGCCGATCCTG+TGG 0.585066 3.2:+78234625 None:intergenic
TCTTCTTCTATCCACAGGAT+CGG 0.587304 3.2:-78234636 MS.gene057268:CDS
AGGGTTCCGATTCCGACCTA+CGG 0.594356 3.2:-78235318 MS.gene057268:CDS
AGAATGGACCTGTCCTGGGT+TGG 0.599825 3.2:+78234408 None:intergenic
AACAAATCTTGGATACTGGA+AGG 0.600211 3.2:-78234581 MS.gene057268:CDS
AGTTTCAAACTGTGGTGAAG+GGG 0.601390 3.2:-78234248 MS.gene057268:CDS
CCATCAAGCTCCTTAAGGGT+GGG 0.602064 3.2:+78234433 None:intergenic
GTCGTGCACCTAACGGGAGG+AGG 0.604113 3.2:-78234483 MS.gene057268:CDS
TGCCGTTAATCTTTGAACGA+AGG 0.604752 3.2:+78235273 None:intergenic
GAGCTTGATGGAACCAACCC+AGG 0.606347 3.2:-78234421 MS.gene057268:CDS
TCATGCTACTATGCTACTTG+GGG 0.608804 3.2:-78237008 MS.gene057268:CDS
AACATCACAGGTCAGAGAAG+AGG 0.609131 3.2:-78234167 MS.gene057268:CDS
AATGGCAGAATGCATGGTTG+TGG 0.615291 3.2:-78237040 None:intergenic
TTGGATACTGGAAGGCAACA+GGG 0.615969 3.2:-78234573 MS.gene057268:CDS
GTATCTCAGAGGAAAAGTGA+TGG 0.620521 3.2:-78234120 None:intergenic
AGCCTTGAAGTTTCAAACTG+TGG 0.630939 3.2:-78234256 MS.gene057268:CDS
TAAGTTCCTCATCCGTAGGT+CGG 0.631642 3.2:+78235306 None:intergenic
GAAATACCGGGCATATCCCA+GGG 0.647709 3.2:+78235200 None:intergenic
GATTAACGGCAATGGTGACG+AGG 0.653308 3.2:-78235261 MS.gene057268:CDS
ATACTGGAAGGCAACAGGGA+AGG 0.655689 3.2:-78234569 MS.gene057268:CDS
TTGGTCGTGCACCTAACGGG+AGG 0.685469 3.2:-78234486 MS.gene057268:CDS
CATTATCCCTGGTATCTCAG+AGG 0.695429 3.2:-78234131 MS.gene057268:CDS
TAAAAGACGACGACTCAGAG+TGG 0.709699 3.2:-78234660 MS.gene057268:CDS
GGTCGGAATCGGAACCCTAG+CGG 0.740333 3.2:+78235323 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTACTGATTTTTTTTTTTTT+TGG - chr3.2:78235486-78235505 MS.gene057268:intron 10.0%
!!! TTCAATTTCATTTTATATTA+TGG - chr3.2:78235739-78235758 MS.gene057268:intron 10.0%
!!! TTTATATAAACTTTTCATTA+TGG + chr3.2:78234681-78234700 None:intergenic 10.0%
!! AAAGTTTATATAAAGTAGAA+TGG - chr3.2:78234687-78234706 MS.gene057268:intron 15.0%
!! TGATTTGACATAATAAAAAT+AGG + chr3.2:78236786-78236805 None:intergenic 15.0%
!!! AGTCAATATTTTTAAAGTAT+CGG + chr3.2:78235381-78235400 None:intergenic 15.0%
!!! ATATTTAACCAATCAAATTT+TGG + chr3.2:78235625-78235644 None:intergenic 15.0%
!!! ATTTCATTTTATATTATGGA+TGG - chr3.2:78235743-78235762 MS.gene057268:intron 15.0%
!!! TGTCAATTTTTTGATTATTT+TGG - chr3.2:78234252-78234271 MS.gene057268:CDS 15.0%
!! AAAAAAGAAAAGAGAAATAC+CGG + chr3.2:78235970-78235989 None:intergenic 20.0%
!! ACGAATTATAAAATGAAAGA+CGG + chr3.2:78234420-78234439 None:intergenic 20.0%
!! ATAGCTTAATTAAATGTTCA+TGG + chr3.2:78236322-78236341 None:intergenic 20.0%
!! ATGTTAAATGTTTGACAAAA+TGG - chr3.2:78234347-78234366 MS.gene057268:intron 20.0%
!! CAAACAAATAGTTAGTTAAT+TGG + chr3.2:78234285-78234304 None:intergenic 20.0%
!! CAATTAACTAACTATTTGTT+TGG - chr3.2:78234283-78234302 MS.gene057268:CDS 20.0%
!! GGTTAAATATTCTATTTGAT+TGG - chr3.2:78235662-78235681 MS.gene057268:intron 20.0%
!!! AATGACTCTAGTTTTTTTTT+TGG - chr3.2:78236264-78236283 MS.gene057268:intron 20.0%
!!! ATATCGTACTTTAATTTGAT+TGG - chr3.2:78235641-78235660 MS.gene057268:intron 20.0%
!!! ATTAAGCTATTTTATCCTAA+AGG + chr3.2:78234785-78234804 None:intergenic 20.0%
!!! ATTTTTTAGGTAAAAGTTGT+CGG - chr3.2:78235210-78235229 MS.gene057268:CDS 20.0%
!!! CTAGTTTTTTTTTTGGTTAT+AGG - chr3.2:78236271-78236290 MS.gene057268:intron 20.0%
!!! TTTGATTGGTTAATACTTTT+CGG - chr3.2:78235676-78235695 MS.gene057268:intron 20.0%
! AAAAAGAAAAGAGAAATACC+GGG + chr3.2:78235969-78235988 None:intergenic 25.0%
! AACATTTAACATGAACACTA+AGG + chr3.2:78234339-78234358 None:intergenic 25.0%
! AAGCATTATTATAGACATCA+TGG + chr3.2:78235468-78235487 None:intergenic 25.0%
! CATAATGAACTAACACAATA+CGG - chr3.2:78234311-78234330 MS.gene057268:intron 25.0%
! CGAATTATAAAATGAAAGAC+GGG + chr3.2:78234419-78234438 None:intergenic 25.0%
! GTATTGTGTTAGTTCATTAT+GGG + chr3.2:78234312-78234331 None:intergenic 25.0%
! GTTGTAACTAAATGTTATGA+TGG + chr3.2:78235417-78235436 None:intergenic 25.0%
!! AAGTTCTTTTATCATTTGTG+AGG + chr3.2:78235088-78235107 None:intergenic 25.0%
!! ACAGTTCTTTTTAATGCAAA+GGG + chr3.2:78235025-78235044 None:intergenic 25.0%
!! GTTACAACAAGATCTTTTTA+AGG - chr3.2:78235429-78235448 MS.gene057268:intron 25.0%
!! TAAACTTTTCATTATGGATG+CGG + chr3.2:78234675-78234694 None:intergenic 25.0%
!!! AAGACATTAGTTTTCTACAT+TGG - chr3.2:78236649-78236668 MS.gene057268:intron 25.0%
!!! GCTGATTTTTTTTTATCTCT+TGG - chr3.2:78236438-78236457 MS.gene057268:intron 25.0%
!!! TTGATTGGTTAATACTTTTC+GGG - chr3.2:78235677-78235696 MS.gene057268:intron 25.0%
AACTATCTACTACACAACTT+TGG - chr3.2:78234592-78234611 MS.gene057268:CDS 30.0%
AAGGATCGTAAAATCAAATC+TGG - chr3.2:78236604-78236623 MS.gene057268:intron 30.0%
AATAGACTGAAAACAACTTG+TGG + chr3.2:78236177-78236196 None:intergenic 30.0%
ACTATCTACTACACAACTTT+GGG - chr3.2:78234593-78234612 MS.gene057268:CDS 30.0%
AGCATTTGTGAAATTGTTTG+AGG - chr3.2:78236124-78236143 MS.gene057268:intron 30.0%
CGTATTGTGTTAGTTCATTA+TGG + chr3.2:78234313-78234332 None:intergenic 30.0%
GGAGAGAATATTATAGAGAA+TGG + chr3.2:78236765-78236784 None:intergenic 30.0%
TAAACAACGAAAACAGTCTA+AGG + chr3.2:78236359-78236378 None:intergenic 30.0%
TACCTTCGTTCAAAGATTAA+CGG - chr3.2:78235879-78235898 MS.gene057268:intron 30.0%
TGAGGATTTGAGTAACATAT+AGG - chr3.2:78236391-78236410 MS.gene057268:intron 30.0%
TGTGAGTTAGTAGATTATCT+AGG - chr3.2:78234564-78234583 MS.gene057268:CDS 30.0%
TGTGATGTTGAAACTGTAAT+GGG + chr3.2:78236976-78236995 None:intergenic 30.0%
TGTTTAAGGAATAGATCATG+AGG - chr3.2:78236373-78236392 MS.gene057268:intron 30.0%
TTACCAAATCATAACTTCAC+CGG - chr3.2:78234633-78234652 MS.gene057268:CDS 30.0%
TTCAACTTTACCAAATCAAG+AGG + chr3.2:78236007-78236026 None:intergenic 30.0%
TTCACAAATGCTTATGTAAG+TGG + chr3.2:78236116-78236135 None:intergenic 30.0%
TTGAACAGAGAAACAAATCT+TGG - chr3.2:78236562-78236581 MS.gene057268:intron 30.0%
! ATGGTTAGCCAAAATTTGAT+TGG - chr3.2:78235614-78235633 MS.gene057268:intron 30.0%
! ATTTGGTAATTAGCATGTCA+TGG + chr3.2:78234622-78234641 None:intergenic 30.0%
! CACAGTTCTTTTTAATGCAA+AGG + chr3.2:78235026-78235045 None:intergenic 30.0%
! GGCTACATCATTTGAAATAT+TGG - chr3.2:78235281-78235300 MS.gene057268:CDS 30.0%
! TAGACTGTTTTCGTTGTTTA+AGG - chr3.2:78236359-78236378 MS.gene057268:intron 30.0%
! TTAGTAAGTTGGATCTAGTT+GGG + chr3.2:78234745-78234764 None:intergenic 30.0%
! TTCTTTTTAATGCAAAGGGT+CGG + chr3.2:78235021-78235040 None:intergenic 30.0%
! TTTAGTAAGTTGGATCTAGT+TGG + chr3.2:78234746-78234765 None:intergenic 30.0%
!! TTTATCTCTTGGTTTGTGTT+GGG - chr3.2:78236449-78236468 MS.gene057268:intron 30.0%
!!! CGAATATTTTAACTGTGAAG+AGG + chr3.2:78235338-78235357 None:intergenic 30.0%
!!! TTTTATCTCTTGGTTTGTGT+TGG - chr3.2:78236448-78236467 MS.gene057268:intron 30.0%
AACAAATCTTGGATACTGGA+AGG - chr3.2:78236573-78236592 MS.gene057268:intron 35.0%
AAGTTTCAAACTGTGGTGAA+GGG - chr3.2:78236905-78236924 MS.gene057268:intron 35.0%
AGAAATCGATGTCTGCAAAT+GGG - chr3.2:78235929-78235948 MS.gene057268:intron 35.0%
AGGTTAAGTAGTTATCTAGC+AGG + chr3.2:78234522-78234541 None:intergenic 35.0%
CACATTATCTCCTCTTGATT+TGG - chr3.2:78235994-78236013 MS.gene057268:intron 35.0%
CATTACAGTTTCAACATCAC+AGG - chr3.2:78236975-78236994 MS.gene057268:CDS 35.0%
CTGTGATGTTGAAACTGTAA+TGG + chr3.2:78236977-78236996 None:intergenic 35.0%
GAAATTGTTTGAGGAGCTTA+TGG - chr3.2:78236133-78236152 MS.gene057268:intron 35.0%
GAGAAACAAATCTTGGATAC+TGG - chr3.2:78236569-78236588 MS.gene057268:intron 35.0%
GAGCTGAACATTTAGTAAGT+TGG + chr3.2:78234756-78234775 None:intergenic 35.0%
GCACATATGCTTTCTGATAT+AGG + chr3.2:78236849-78236868 None:intergenic 35.0%
GGTTAAGTAGTTATCTAGCA+GGG + chr3.2:78234521-78234540 None:intergenic 35.0%
TGAAATGCTAGATTAGCAAG+AGG - chr3.2:78235546-78235565 MS.gene057268:intron 35.0%
TGATCGGATTGTATTTCTTC+TGG + chr3.2:78236949-78236968 None:intergenic 35.0%
TGCTGTTCATAATGATGCTA+CGG - chr3.2:78235134-78235153 MS.gene057268:intron 35.0%
TGTGTTCCAAATTGCATTTC+TGG - chr3.2:78234443-78234462 MS.gene057268:CDS 35.0%
! AAATCTGGAACCATCTTGAT+TGG - chr3.2:78236619-78236638 MS.gene057268:intron 35.0%
! AATCTGGAACCATCTTGATT+GGG - chr3.2:78236620-78236639 MS.gene057268:intron 35.0%
! CTGTTCAATTGATTCCCATT+TGG + chr3.2:78236550-78236569 None:intergenic 35.0%
! GAAATGCAATTTGGAACACA+TGG + chr3.2:78234443-78234462 None:intergenic 35.0%
!! AAACAGTCTAAGGTCTTGTT+TGG + chr3.2:78236349-78236368 None:intergenic 35.0%
!! ATTTGCAGACATCGATTTCT+CGG + chr3.2:78235929-78235948 None:intergenic 35.0%
!! CAAATTGCATTTCTGGTTTG+GGG - chr3.2:78234450-78234469 MS.gene057268:CDS 35.0%
!! CCAAATTGCATTTCTGGTTT+GGG - chr3.2:78234449-78234468 MS.gene057268:CDS 35.0%
!! TCCAAATTGCATTTCTGGTT+TGG - chr3.2:78234448-78234467 MS.gene057268:CDS 35.0%
AAGCTTTCCATGATAGCTGA+TGG - chr3.2:78236202-78236221 MS.gene057268:intron 40.0%
AGATTCAGTGTGATTGTGGA+AGG + chr3.2:78234542-78234561 None:intergenic 40.0%
AGCCTTGAAGTTTCAAACTG+TGG - chr3.2:78236898-78236917 MS.gene057268:intron 40.0%
AGGATCGGCAATATCCAAAT+GGG - chr3.2:78236533-78236552 MS.gene057268:intron 40.0%
AGTTTCAAACTGTGGTGAAG+GGG - chr3.2:78236906-78236925 MS.gene057268:intron 40.0%
ATGCATAGATCGCATGCTTA+GGG - chr3.2:78236065-78236084 MS.gene057268:intron 40.0%
ATGCTTACTGTTACGAGATG+CGG - chr3.2:78235517-78235536 MS.gene057268:intron 40.0%
ATTCCGACCCTTGCATTAAA+GGG - chr3.2:78234896-78234915 MS.gene057268:intron 40.0%
CACAGTTCCCTTTAATGCAA+GGG + chr3.2:78234906-78234925 None:intergenic 40.0%
CCCAAACCAGAAATGCAATT+TGG + chr3.2:78234452-78234471 None:intergenic 40.0%
CGTTCAAAGATTAACGGCAA+TGG - chr3.2:78235885-78235904 MS.gene057268:intron 40.0%
CTAACCATACATGAGACAGT+TGG + chr3.2:78235602-78235621 None:intergenic 40.0%
CTACCTACATCTTTCTTGTG+AGG + chr3.2:78234962-78234981 None:intergenic 40.0%
CTTCCGGTGAAGTTATGATT+TGG + chr3.2:78234639-78234658 None:intergenic 40.0%
CTTCTTCATCCCAATCAAGA+TGG + chr3.2:78236632-78236651 None:intergenic 40.0%
GAAGTTTCAAACTGTGGTGA+AGG - chr3.2:78236904-78236923 MS.gene057268:intron 40.0%
GAGAAATCGATGTCTGCAAA+TGG - chr3.2:78235928-78235947 MS.gene057268:intron 40.0%
GTTCAGCTCTTTGTTCCTTT+AGG - chr3.2:78234767-78234786 MS.gene057268:intron 40.0%
TAATGATGCTACGGCATCTA+CGG - chr3.2:78235143-78235162 MS.gene057268:intron 40.0%
TACCTACATCTAAGCCTTTC+TGG + chr3.2:78234486-78234505 None:intergenic 40.0%
TATGCAACAGCTTGTCTCAA+GGG - chr3.2:78235304-78235323 MS.gene057268:CDS 40.0%
TATGCATAGATCGCATGCTT+AGG - chr3.2:78236064-78236083 MS.gene057268:intron 40.0%
TCACAGTTCCCTTTAATGCA+AGG + chr3.2:78234907-78234926 None:intergenic 40.0%
TCGGCGCAAAAATAAGCTTA+AGG - chr3.2:78234185-78234204 MS.gene057268:CDS 40.0%
TCTATAAGTTCCTCATCCGT+AGG + chr3.2:78235855-78235874 None:intergenic 40.0%
TCTTCTTCTATCCACAGGAT+CGG - chr3.2:78236518-78236537 MS.gene057268:intron 40.0%
TGCCGTTAATCTTTGAACGA+AGG + chr3.2:78235884-78235903 None:intergenic 40.0%
TTCCACAATCACACTGAATC+TGG - chr3.2:78234541-78234560 MS.gene057268:CDS 40.0%
! AACTGTAATGGGAGCTTGAT+CGG + chr3.2:78236965-78236984 None:intergenic 40.0%
! CACCACAGTTTGAAACTTCA+AGG + chr3.2:78236903-78236922 None:intergenic 40.0%
! CGGTTCAAGTTACTAACTTC+CGG + chr3.2:78234655-78234674 None:intergenic 40.0%
! CTCATGCTACTATGCTACTT+GGG - chr3.2:78234145-78234164 MS.gene057268:CDS 40.0%
! GTGTTTTGTCCATTGCTTGA+CGG - chr3.2:78235777-78235796 MS.gene057268:intron 40.0%
! GTTGTTTCCATCAGCTATCA+TGG + chr3.2:78236212-78236231 None:intergenic 40.0%
! TCATGCTACTATGCTACTTG+GGG - chr3.2:78234146-78234165 MS.gene057268:CDS 40.0%
!! AAAGTATCGGTTTCCCTTGA+GGG + chr3.2:78235368-78235387 None:intergenic 40.0%
!! GAAACATAGCATCGATTCCA+GGG - chr3.2:78235166-78235185 MS.gene057268:intron 40.0%
!! TAAAGTATCGGTTTCCCTTG+AGG + chr3.2:78235369-78235388 None:intergenic 40.0%
!! TAGGTAAAAGTTGTCGGCTT+AGG - chr3.2:78235216-78235235 MS.gene057268:CDS 40.0%
!!! ACTTTTCCTCTGAGATACCA+GGG + chr3.2:78237032-78237051 None:intergenic 40.0%
!!! AGCTGCTGGATGCATTTTTT+AGG - chr3.2:78235197-78235216 MS.gene057268:intron 40.0%
AACATCACAGGTCAGAGAAG+AGG - chr3.2:78236987-78237006 MS.gene057268:CDS 45.0%
AATGATGCTACGGCATCTAC+GGG - chr3.2:78235144-78235163 MS.gene057268:intron 45.0%
ACCATACATGAGACAGTTGG+CGG + chr3.2:78235599-78235618 None:intergenic 45.0%
ATAGAGAATGGACCTGTCCT+GGG + chr3.2:78236753-78236772 None:intergenic 45.0%
ATGCATCCAGCAGCTGTAAA+AGG + chr3.2:78235192-78235211 None:intergenic 45.0%
CACCAGATTCAGTGTGATTG+TGG + chr3.2:78234546-78234565 None:intergenic 45.0%
CAGGATCGGCAATATCCAAA+TGG - chr3.2:78236532-78236551 MS.gene057268:intron 45.0%
CATTATCCCTGGTATCTCAG+AGG - chr3.2:78237023-78237042 MS.gene057268:CDS 45.0%
GATTCCGACCCTTGCATTAA+AGG - chr3.2:78234895-78234914 MS.gene057268:intron 45.0%
GCTCATGCTACTATGCTACT+TGG - chr3.2:78234144-78234163 MS.gene057268:CDS 45.0%
GGATCTAGTTGGGACACTAT+TGG + chr3.2:78234735-78234754 None:intergenic 45.0%
GGTTCCATCAAGCTCCTTAA+GGG + chr3.2:78236728-78236747 None:intergenic 45.0%
GTATGCAACAGCTTGTCTCA+AGG - chr3.2:78235303-78235322 MS.gene057268:CDS 45.0%
GTGCCTCACAAGAAAGATGT+AGG - chr3.2:78234956-78234975 MS.gene057268:intron 45.0%
GTGGTTCTTCTTCTATCCAC+AGG - chr3.2:78236513-78236532 MS.gene057268:intron 45.0%
GTTCCCTTTAATGCAAGGGT+CGG + chr3.2:78234902-78234921 None:intergenic 45.0%
TAAAAGACGACGACTCAGAG+TGG - chr3.2:78236494-78236513 MS.gene057268:intron 45.0%
TAACGGGAGGAGGTCTAATT+GGG - chr3.2:78236681-78236700 MS.gene057268:intron 45.0%
TAAGTTCCTCATCCGTAGGT+CGG + chr3.2:78235851-78235870 None:intergenic 45.0%
TACATTGGTCGTGCACCTAA+CGG - chr3.2:78236664-78236683 MS.gene057268:intron 45.0%
TATAGAGAATGGACCTGTCC+TGG + chr3.2:78236754-78236773 None:intergenic 45.0%
TCAAATGATGTAGCCAGCAG+TGG + chr3.2:78235276-78235295 None:intergenic 45.0%
TCTATTCCAACCTGCTGAGA+GGG - chr3.2:78234931-78234950 MS.gene057268:intron 45.0%
TGGTTCCATCAAGCTCCTTA+AGG + chr3.2:78236729-78236748 None:intergenic 45.0%
TTCTATTCCAACCTGCTGAG+AGG - chr3.2:78234930-78234949 MS.gene057268:intron 45.0%
TTGGATACTGGAAGGCAACA+GGG - chr3.2:78236581-78236600 MS.gene057268:intron 45.0%
TTTGGATATTGCCGATCCTG+TGG + chr3.2:78236532-78236551 None:intergenic 45.0%
! TCTTTTCCAACCTGCTGAGA+AGG - chr3.2:78235051-78235070 MS.gene057268:intron 45.0%
!! AAGTATCGGTTTCCCTTGAG+GGG + chr3.2:78235367-78235386 None:intergenic 45.0%
!! CTCTGAGATACCAGGGATAA+TGG + chr3.2:78237025-78237044 None:intergenic 45.0%
!! GGAAACATAGCATCGATTCC+AGG - chr3.2:78235165-78235184 MS.gene057268:intron 45.0%
!! GTAAAAGTTGTCGGCTTAGG+TGG - chr3.2:78235219-78235238 MS.gene057268:CDS 45.0%
!! TTCTGGTTTGGGGTTAAGCA+TGG - chr3.2:78234460-78234479 MS.gene057268:CDS 45.0%
!!! CACTTTTCCTCTGAGATACC+AGG + chr3.2:78237033-78237052 None:intergenic 45.0%
ACATTGGTCGTGCACCTAAC+GGG - chr3.2:78236665-78236684 MS.gene057268:intron 50.0%
ACCATCTTGCCGTCAAGCAA+TGG + chr3.2:78235789-78235808 None:intergenic 50.0%
ACCGCCAACTGTCTCATGTA+TGG - chr3.2:78235595-78235614 MS.gene057268:intron 50.0%
AGAAATACCGGGCATATCCC+AGG + chr3.2:78235958-78235977 None:intergenic 50.0%
AGTGGATCAACAGTCAGGTG+GGG + chr3.2:78235258-78235277 None:intergenic 50.0%
ATACTGGAAGGCAACAGGGA+AGG - chr3.2:78236585-78236604 MS.gene057268:intron 50.0%
ATGAAAGACGGGATTCTGCG+AGG + chr3.2:78234408-78234427 None:intergenic 50.0%
ATGTCTGCAAATGGGAACCC+TGG - chr3.2:78235937-78235956 MS.gene057268:intron 50.0%
CAATTAGACCTCCTCCCGTT+AGG + chr3.2:78236682-78236701 None:intergenic 50.0%
CAGAGAAGAGGATAAGCAGC+TGG - chr3.2:78236999-78237018 MS.gene057268:CDS 50.0%
CAGTGGATCAACAGTCAGGT+GGG + chr3.2:78235259-78235278 None:intergenic 50.0%
CCATCAAGCTCCTTAAGGGT+GGG + chr3.2:78236724-78236743 None:intergenic 50.0%
CTAACGGGAGGAGGTCTAAT+TGG - chr3.2:78236680-78236699 MS.gene057268:intron 50.0%
CTCTGAATTCGCTTCCGCTA+GGG - chr3.2:78235817-78235836 MS.gene057268:intron 50.0%
CTTGGATACTGGAAGGCAAC+AGG - chr3.2:78236580-78236599 MS.gene057268:intron 50.0%
GAAATACCGGGCATATCCCA+GGG + chr3.2:78235957-78235976 None:intergenic 50.0%
GGCCAGAAAGGCTTAGATGT+AGG - chr3.2:78234481-78234500 MS.gene057268:CDS 50.0%
GGGCTGCAAAGTTGCTCAAT+CGG - chr3.2:78234166-78234185 MS.gene057268:CDS 50.0%
TAAGCCTAGTGTGCAAGCAC+AGG - chr3.2:78234821-78234840 MS.gene057268:intron 50.0%
TCCATCAAGCTCCTTAAGGG+TGG + chr3.2:78236725-78236744 None:intergenic 50.0%
TCCATTGCTTGACGGCAAGA+TGG - chr3.2:78235785-78235804 MS.gene057268:intron 50.0%
TCGCATGCTTAGGGTCTGTT+TGG - chr3.2:78236074-78236093 MS.gene057268:intron 50.0%
TCTCTGAATTCGCTTCCGCT+AGG - chr3.2:78235816-78235835 MS.gene057268:intron 50.0%
TGAACCTGTGCTTGCACACT+AGG + chr3.2:78234828-78234847 None:intergenic 50.0%
TGTCTGCAAATGGGAACCCT+GGG - chr3.2:78235938-78235957 MS.gene057268:intron 50.0%
! GATTAACGGCAATGGTGACG+AGG - chr3.2:78235893-78235912 MS.gene057268:intron 50.0%
AAGCAGCTGGCCATTATCCC+TGG - chr3.2:78237012-78237031 MS.gene057268:CDS 55.0%
ACCTGCTGAGAAGGAGCTAG+AGG - chr3.2:78235060-78235079 MS.gene057268:intron 55.0%
AGAATGGACCTGTCCTGGGT+TGG + chr3.2:78236749-78236768 None:intergenic 55.0%
AGGGTTCCGATTCCGACCTA+CGG - chr3.2:78235836-78235855 MS.gene057268:intron 55.0%
ATATTCGACAGCGCCCCTCA+AGG - chr3.2:78235351-78235370 MS.gene057268:CDS 55.0%
ATTCCAACCTGCTGAGAGGG+AGG - chr3.2:78234934-78234953 MS.gene057268:intron 55.0%
CCAGCAGTGGATCAACAGTC+AGG + chr3.2:78235263-78235282 None:intergenic 55.0%
CCCACCCTTAAGGAGCTTGA+TGG - chr3.2:78236721-78236740 MS.gene057268:intron 55.0%
CCTCATCCGTAGGTCGGAAT+CGG + chr3.2:78235845-78235864 None:intergenic 55.0%
CCTGACTGTTGATCCACTGC+TGG - chr3.2:78235260-78235279 MS.gene057268:CDS 55.0%
CTAGCTCCTTCTCAGCAGGT+TGG + chr3.2:78235060-78235079 None:intergenic 55.0%
GAGCTTGATGGAACCAACCC+AGG - chr3.2:78236733-78236752 MS.gene057268:intron 55.0%
GCAGTGGATCAACAGTCAGG+TGG + chr3.2:78235260-78235279 None:intergenic 55.0%
GGGGTTAAGCATGGCCAGAA+AGG - chr3.2:78234469-78234488 MS.gene057268:CDS 55.0%
TATTCGACAGCGCCCCTCAA+GGG - chr3.2:78235352-78235371 MS.gene057268:CDS 55.0%
TGATGGAACCAACCCAGGAC+AGG - chr3.2:78236738-78236757 MS.gene057268:intron 55.0%
! ACCTCTAGCTCCTTCTCAGC+AGG + chr3.2:78235064-78235083 None:intergenic 55.0%
! CGAGTATCGTCCCACCCTTA+AGG - chr3.2:78236711-78236730 MS.gene057268:intron 55.0%
CCAGCAGCTGTAAAAGGCCC+TGG + chr3.2:78235186-78235205 None:intergenic 60.0%
CCGATTCCGACCTACGGATG+AGG - chr3.2:78235842-78235861 MS.gene057268:intron 60.0%
GGTCGGAATCGGAACCCTAG+CGG + chr3.2:78235834-78235853 None:intergenic 60.0%
TGGGAACCCTGGGATATGCC+CGG - chr3.2:78235948-78235967 MS.gene057268:intron 60.0%
TTGGTCGTGCACCTAACGGG+AGG - chr3.2:78236668-78236687 MS.gene057268:intron 60.0%
! CCAGGGCCTTTTACAGCTGC+TGG - chr3.2:78235183-78235202 MS.gene057268:intron 60.0%
! CGGCAATGGTGACGAGGTTC+AGG - chr3.2:78235899-78235918 MS.gene057268:intron 60.0%
GCACCTCCCTCTCAGCAGGT+TGG + chr3.2:78234940-78234959 None:intergenic 65.0%
GTCGTGCACCTAACGGGAGG+AGG - chr3.2:78236671-78236690 MS.gene057268:intron 65.0%
! TGAGGCACCTCCCTCTCAGC+AGG + chr3.2:78234944-78234963 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 78234123 78237053 78234123 ID=MS.gene057268
chr3.2 mRNA 78234123 78237053 78234123 ID=MS.gene057268.t1;Parent=MS.gene057268
chr3.2 exon 78236970 78237053 78236970 ID=MS.gene057268.t1.exon1;Parent=MS.gene057268.t1
chr3.2 CDS 78236970 78237053 78236970 ID=cds.MS.gene057268.t1;Parent=MS.gene057268.t1
chr3.2 exon 78235207 78235372 78235207 ID=MS.gene057268.t1.exon2;Parent=MS.gene057268.t1
chr3.2 CDS 78235207 78235372 78235207 ID=cds.MS.gene057268.t1;Parent=MS.gene057268.t1
chr3.2 exon 78234417 78234694 78234417 ID=MS.gene057268.t1.exon3;Parent=MS.gene057268.t1
chr3.2 CDS 78234417 78234694 78234417 ID=cds.MS.gene057268.t1;Parent=MS.gene057268.t1
chr3.2 exon 78234123 78234320 78234123 ID=MS.gene057268.t1.exon4;Parent=MS.gene057268.t1
chr3.2 CDS 78234123 78234320 78234123 ID=cds.MS.gene057268.t1;Parent=MS.gene057268.t1
Gene Sequence

>MS.gene057268

ATGCATGGTTGTGGAGATGATGCTCATGCTACTATGCTACTTGGGGCTGCAAAGTTGCTCAATCGGCGCAAAAATAAGCTTAAGGTTCTTTTCAAATTCTCTGTTTCTGCTCTTCTTTTATATTATTGTTGTCAATTTTTTGATTATTTTGGTGTTTCTCCAATTAACTAACTATTTGTTTGGTCACCCATAATGAACTAACACAATACGGTGCCTTAGTGTTCATGTTAAATGTTTGACAAAATGGACTGTGAAATAGTTTAGACAAATTGACTTCTAACGCCTCGCAGAATCCCGTCTTTCATTTTATAATTCGTCCATGTGTTCCAAATTGCATTTCTGGTTTGGGGTTAAGCATGGCCAGAAAGGCTTAGATGTAGGTATATGTATCTCAGCCCTGCTAGATAACTACTTAACCTTCCACAATCACACTGAATCTGGTGTGAGTTAGTAGATTATCTAGGTTTTGAACTATCTACTACACAACTTTGGGCTACCATGACATGCTAATTACCAAATCATAACTTCACCGGAAGTTAGTAACTTGAACCGCATCCATAATGAAAAGTTTATATAAAGTAGAATGGCATAAAATTCAAAATGTATAAACCAATAGTGTCCCAACTAGATCCAACTTACTAAATGTTCAGCTCTTTGTTCCTTTAGGATAAAATAGCTTAATAAAATATTATAGATTTTAAGCCTAGTGTGCAAGCACAGGTTCAGAAAGATGAAAGTAGATGTTCTATTCTGTTAGTGTGTTTGATGTTCTGATTCCGACCCTTGCATTAAAGGGAACTGTGAGACTTCTATTCCAACCTGCTGAGAGGGAGGTGCCTCACAAGAAAGATGTAGGTAGATGTTCTATTCTGTTAGTGTGTTTGATGCTCTGATTCCGACCCTTTGCATTAAAAAGAACTGTGAGACTTCTTTTCCAACCTGCTGAGAAGGAGCTAGAGGTGCCTCACAAATGATAAAAGAACTTGTTCTTCAAGATGTAGAAGCAATTTTTGCTGTTCATAATGATGCTACGGCATCTACGGGAAACATAGCATCGATTCCAGGGCCTTTTACAGCTGCTGGATGCATTTTTTAGGTAAAAGTTGTCGGCTTAGGTGGTCATGCTGCATTTCCCCACCTGACTGTTGATCCACTGCTGGCTACATCATTTGAAATATTGGTATGCAACAGCTTGTCTCAAGGGAAATTGATCCTCTTCACAGTTAAAATATTCGACAGCGCCCCTCAAGGGAAACCGATACTTTAAAAATATTGACTTTGACAATAAGATCCATCATAACATTTAGTTACAACAAGATCTTTTTAAGGAAAAATATTTACTCCATGATGTCTATAATAATGCTTACTGATTTTTTTTTTTTTTGGAAAGAATAATGCTTACTGTTACGAGATGCGGTTTATATGAAATGCTAGATTAGCAAGAGGCAGCAAATAACACTTTACAAATAATAACCGCCAACTGTCTCATGTATGGTTAGCCAAAATTTGATTGGTTAAATATCGTACTTTAATTTGATTGGTTAAATATTCTATTTGATTGGTTAATACTTTTCGGGATGAGATCAATATTCTTTTTTTTATTTTTTTTATTAATATTCAATTTCATTTTATATTATGGATGGTCTTGACTTTTGTGTTTTGTCCATTGCTTGACGGCAAGATGGTGACGTTTTCTCTGAATTCGCTTCCGCTAGGGTTCCGATTCCGACCTACGGATGAGGAACTTATAGATTACTACCTTCGTTCAAAGATTAACGGCAATGGTGACGAGGTTCAGGTTATCCGAGAAATCGATGTCTGCAAATGGGAACCCTGGGATATGCCCGGTATTTCTCTTTTCTTTTTTTACGCACATTATCTCCTCTTGATTTGGTAAAGTTGAAAATCTTATAGTTTTTCTTTGATAAATTCTTAGCTTAATATGCATAGATCGCATGCTTAGGGTCTGTTTGGATTGACATAAGTTTATCCACTTACATAAGCATTTGTGAAATTGTTTGAGGAGCTTATGGAAACAACTTATTACATGTCCACAAGTTGTTTTCAGTCTATTTCTTTAAGCTTTCCATGATAGCTGATGGAAACAACTTATAGCTTAAACTACTGATTTTTATGAAAACAATGACTCTAGTTTTTTTTTTGGTTATAGGATTAACTTATACATAAGAACTTATGCCATGAACATTTAATTAAGCTATTTATCCAAACAAGACCTTAGACTGTTTTCGTTGTTTAAGGAATAGATCATGAGGATTTGAGTAACATATAGGAGTGCTGAATTGCTTTTTTATTTTGCTGATTTTTTTTTATCTCTTGGTTTGTGTTGGGTTTGTTGTAGATTTGTCAGTGATAAAAGACGACGACTCAGAGTGGTTCTTCTTCTATCCACAGGATCGGCAATATCCAAATGGGAATCAATTGAACAGAGAAACAAATCTTGGATACTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGGATGAAGAAGACATTAGTTTTCTACATTGGTCGTGCACCTAACGGGAGGAGGTCTAATTGGGTAATGCACGAGTATCGTCCCACCCTTAAGGAGCTTGATGGAACCAACCCAGGACAGGTCCATTCTCTATAATATTCTCTCCTATTTTTATTATGTCAAATCATATGAAGATGATAACAATTACTAATCTGTTAATTTTTTTTCCTATATCAGAAAGCATATGTGCTATGTCGATTATTTAAGAAAAACGACGAGAGCCTTGAAGTTTCAAACTGTGGTGAAGGGGAGCAGACTAATTCAGCTCCAGAAGAAATACAATCCGATCAAGCTCCCATTACAGTTTCAACATCACAGGTCAGAGAAGAGGATAAGCAGCTGGCCATTATCCCTGGTATCTCAGAGGAAAAGTGA
Protein sequence

>MS.gene057268.t1

MHGCGDDAHATMLLGAAKLLNRRKNKLKMVTFSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVQVIREIDVCKWEPWDMPDLSVIKDDDSEWFFFYPQDRQYPNGNQLNRETNLGYWKATGKDRKIKSGTILIGMKKTLVFYIGRAPNGRRSNWVMHEYRPTLKELDGTNPGQKAYVLCRLFKKNDESLEVSNCGEGEQTNSAPEEIQSDQAPITVSTSQVREEDKQLAIIPGISEEK