AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06587

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06587.t1 MTR_3g093040 91.628 215 18 0 27 241 98 312 1.63e-148 416
MS.gene06587.t1 MTR_3g093040 64.000 50 10 1 1 50 1 42 3.09e-11 62.4
MS.gene06587.t1 MTR_3g093050 83.105 219 30 1 29 240 14 232 1.52e-129 379
MS.gene06587.t1 MTR_3g093050 83.105 219 30 1 29 240 14 232 3.64e-129 378
MS.gene06587.t1 MTR_5g069030 69.091 220 61 1 28 240 16 235 6.44e-110 329
MS.gene06587.t1 MTR_3g064580 52.308 195 88 3 36 227 5 197 1.42e-60 202
MS.gene06587.t1 MTR_5g076850 52.850 193 83 3 36 228 5 189 1.75e-60 201
MS.gene06587.t1 MTR_6g477900 46.296 216 100 2 37 240 6 217 5.48e-59 187
MS.gene06587.t1 MTR_2g064090 47.739 199 84 5 36 228 5 189 2.59e-57 186
MS.gene06587.t1 MTR_2g086880 49.718 177 76 3 25 196 6 174 6.02e-56 186
MS.gene06587.t1 MTR_2g086880 49.718 177 76 3 25 196 6 174 1.42e-55 187
MS.gene06587.t1 MTR_3g070030 44.949 198 102 3 37 229 19 214 2.09e-53 176
MS.gene06587.t1 MTR_5g014300 47.264 201 87 5 36 224 5 198 3.14e-53 175
MS.gene06587.t1 MTR_5g012080 50.318 157 75 3 33 187 3 158 3.14e-53 175
MS.gene06587.t1 MTR_4g036030 52.500 160 71 4 29 187 1 156 1.37e-52 174
MS.gene06587.t1 MTR_4g101680 47.929 169 83 3 29 196 1 165 5.12e-52 172
MS.gene06587.t1 MTR_8g023860 53.548 155 63 4 33 184 8 156 2.94e-51 172
MS.gene06587.t1 MTR_8g023840 56.291 151 57 5 37 184 11 155 1.37e-50 170
MS.gene06587.t1 MTR_0036s0150 54.667 150 66 2 40 188 8 156 2.47e-50 172
MS.gene06587.t1 MTR_4g098630 51.829 164 74 3 36 195 5 167 6.26e-50 166
MS.gene06587.t1 MTR_5g021710 46.667 180 92 3 35 212 6 183 1.41e-49 166
MS.gene06587.t1 MTR_8g076110 47.403 154 78 2 35 187 4 155 1.84e-49 164
MS.gene06587.t1 MTR_3g096140 48.649 148 76 0 40 187 10 157 6.39e-49 162
MS.gene06587.t1 MTR_1g090723 53.333 150 69 1 40 188 11 160 1.68e-48 169
MS.gene06587.t1 MTR_1g090720 51.250 160 72 1 36 189 41 200 1.71e-48 166
MS.gene06587.t1 MTR_1g097300 51.613 155 74 1 34 188 17 170 1.86e-48 167
MS.gene06587.t1 MTR_1g090723 54.000 150 67 2 40 188 11 159 2.05e-48 168
MS.gene06587.t1 MTR_8g063550 47.973 148 77 0 40 187 9 156 3.67e-48 162
MS.gene06587.t1 MTR_1g090723 54.000 150 67 2 40 188 11 159 4.22e-48 167
MS.gene06587.t1 MTR_3g096140 48.649 148 76 0 40 187 10 157 8.69e-48 161
MS.gene06587.t1 MTR_4g035590 47.531 162 79 3 30 189 1 158 1.13e-47 161
MS.gene06587.t1 MTR_1g096430 49.342 152 74 2 37 187 7 156 1.71e-47 160
MS.gene06587.t1 MTR_8g063550 47.973 148 77 0 40 187 9 156 2.18e-47 162
MS.gene06587.t1 MTR_8g063550 47.973 148 77 0 40 187 9 156 2.45e-47 162
MS.gene06587.t1 MTR_3g435150 43.868 212 96 5 37 229 16 223 3.17e-47 158
MS.gene06587.t1 MTR_6g084430 50.000 152 72 2 37 188 5 152 6.37e-47 158
MS.gene06587.t1 MTR_8g023900 48.619 181 80 6 30 201 3 179 7.76e-47 161
MS.gene06587.t1 MTR_8g023900 45.349 172 81 5 39 203 195 360 2.12e-41 147
MS.gene06587.t1 MTR_2g079990 48.734 158 75 3 36 191 15 168 9.93e-47 159
MS.gene06587.t1 MTR_3g109340 53.548 155 67 3 36 188 21 172 1.16e-46 159
MS.gene06587.t1 MTR_2g062730 47.403 154 77 3 36 187 9 160 1.22e-46 158
MS.gene06587.t1 MTR_4g108760 51.299 154 71 2 37 188 17 168 1.62e-46 158
MS.gene06587.t1 MTR_7g011120 42.079 202 104 3 40 230 11 210 2.31e-46 156
MS.gene06587.t1 MTR_3g109340 52.903 155 67 3 36 188 21 171 4.16e-46 157
MS.gene06587.t1 MTR_8g023930 45.977 174 81 5 37 203 24 191 1.01e-45 159
MS.gene06587.t1 MTR_7g011130 40.553 217 111 3 40 240 22 236 3.87e-45 154
MS.gene06587.t1 MTR_6g012670 49.091 165 73 3 37 199 20 175 4.17e-45 153
MS.gene06587.t1 MTR_4g081870 45.455 165 80 3 29 187 1 161 1.92e-44 150
MS.gene06587.t1 MTR_8g059170 48.428 159 76 3 36 191 13 168 3.52e-44 151
MS.gene06587.t1 MTR_8g467490 43.636 165 80 4 40 193 17 179 4.88e-44 152
MS.gene06587.t1 MTR_8g093580 45.270 148 81 0 40 187 9 156 5.34e-44 154
MS.gene06587.t1 MTR_1g008740 50.641 156 71 4 36 188 12 164 5.92e-44 151
MS.gene06587.t1 MTR_1g008740 50.641 156 71 4 36 188 26 178 6.67e-44 151
MS.gene06587.t1 MTR_7g085220 40.777 206 96 5 37 222 8 207 9.56e-44 150
MS.gene06587.t1 MTR_8g024480 44.134 179 89 4 37 204 15 193 1.84e-43 152
MS.gene06587.t1 MTR_2g078700 48.765 162 67 4 37 189 23 177 1.85e-43 150
MS.gene06587.t1 MTR_7g005280 47.712 153 71 3 37 187 15 160 2.56e-43 147
MS.gene06587.t1 MTR_3g088110 46.154 156 74 4 37 187 7 157 8.05e-43 147
MS.gene06587.t1 MTR_3g070040 47.305 167 72 4 37 199 8 162 8.06e-43 148
MS.gene06587.t1 MTR_5g041940 45.455 165 82 3 37 195 3 165 1.10e-42 145
MS.gene06587.t1 MTR_8g099750 42.697 178 87 4 25 193 2 173 1.37e-42 144
MS.gene06587.t1 MTR_2g079990 41.398 186 75 3 36 191 15 196 1.56e-42 148
MS.gene06587.t1 MTR_5g040420 42.073 164 83 4 40 193 17 178 2.01e-42 148
MS.gene06587.t1 MTR_3g096920 46.497 157 72 5 37 187 7 157 4.28e-42 145
MS.gene06587.t1 MTR_4g134460 46.309 149 75 3 40 187 57 201 5.60e-42 148
MS.gene06587.t1 MTR_2g080010 42.771 166 80 3 37 189 15 178 5.85e-42 146
MS.gene06587.t1 MTR_8g094580 45.860 157 74 4 37 187 7 158 1.02e-41 144
MS.gene06587.t1 MTR_2157s0010 43.976 166 75 5 37 188 8 169 2.30e-41 142
MS.gene06587.t1 MTR_3g116070 41.294 201 103 6 37 232 23 213 4.28e-41 144
MS.gene06587.t1 MTR_7g100990 39.583 192 97 4 37 211 11 200 7.02e-41 142
MS.gene06587.t1 MTR_6g032770 45.223 157 80 3 37 189 18 172 1.09e-40 143
MS.gene06587.t1 MTR_3g096140 46.667 135 72 0 53 187 2 136 1.17e-40 142
MS.gene06587.t1 MTR_2g064470 41.969 193 89 7 37 215 11 194 2.01e-40 141
MS.gene06587.t1 MTR_3g096920 50.394 127 60 2 37 163 7 130 2.06e-40 141
MS.gene06587.t1 MTR_4g089135 41.667 180 78 4 37 191 15 192 2.51e-40 142
MS.gene06587.t1 MTR_1g069805 46.104 154 75 3 36 187 9 156 3.85e-40 139
MS.gene06587.t1 MTR_7g085260 48.101 158 74 3 37 188 17 172 4.09e-40 142
MS.gene06587.t1 MTR_6g011860 42.236 161 81 3 40 190 18 176 5.69e-40 142
MS.gene06587.t1 MTR_2g093810 41.209 182 88 5 36 207 13 185 1.25e-38 137
MS.gene06587.t1 MTR_8g023880 46.471 170 62 8 36 187 6 164 8.84e-38 133
MS.gene06587.t1 MTR_7g097090 46.053 152 74 3 36 185 9 154 9.75e-38 134
MS.gene06587.t1 MTR_4g075980 44.516 155 75 4 36 187 15 161 2.52e-37 132
MS.gene06587.t1 MTR_3g098810 40.449 178 92 3 26 193 3 176 6.22e-37 130
MS.gene06587.t1 MTR_3g098810 43.662 142 72 2 26 163 3 140 4.94e-35 123
MS.gene06587.t1 MTR_5g090970 42.500 160 78 5 40 187 21 178 2.63e-34 125
MS.gene06587.t1 MTR_5g090970 42.500 160 77 5 40 187 21 177 9.62e-34 124
MS.gene06587.t1 MTR_2g086690 40.385 156 85 5 38 185 5 160 1.07e-33 122
MS.gene06587.t1 MTR_4g052620 40.127 157 85 5 37 185 5 160 1.71e-33 122
MS.gene06587.t1 MTR_2g068880 41.071 168 82 5 37 188 21 187 2.45e-33 122
MS.gene06587.t1 MTR_2g068920 40.000 170 85 5 35 188 18 186 8.21e-33 120
MS.gene06587.t1 MTR_7g105170 35.758 165 96 5 34 188 1 165 1.08e-30 114
MS.gene06587.t1 MTR_8g094580 48.039 102 44 3 92 187 6 104 5.43e-25 99.0
MS.gene06587.t1 MTR_4g094302 31.481 162 93 4 37 190 11 162 6.08e-23 92.4
MS.gene06587.t1 MTR_4g094302 36.434 129 70 3 37 163 11 129 2.57e-22 90.1
MS.gene06587.t1 MTR_7g070140 46.835 79 40 1 87 163 12 90 2.67e-19 81.3
MS.gene06587.t1 MTR_7g083330 33.071 127 81 3 37 162 18 141 5.74e-15 71.2
MS.gene06587.t1 MTR_7g083360 33.071 127 81 3 37 162 10 133 3.04e-14 68.6
MS.gene06587.t1 MTR_8g093790 30.464 151 83 6 37 187 10 138 3.31e-14 68.9
MS.gene06587.t1 MTR_3g096400 29.630 162 94 4 37 186 7 160 1.48e-13 67.8
MS.gene06587.t1 MTR_7g070150 41.176 68 37 1 135 202 8 72 5.62e-13 63.2
MS.gene06587.t1 MTR_2g014680 29.605 152 86 6 34 168 50 197 2.27e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06587.t1 AT4G35580 62.376 202 73 1 29 227 1 202 1.00e-85 264
MS.gene06587.t1 AT4G35580 62.376 202 73 1 29 227 1 202 1.53e-85 264
MS.gene06587.t1 AT4G35580 62.376 202 73 1 29 227 1 202 1.72e-85 264
MS.gene06587.t1 AT1G33060 64.948 194 62 2 20 207 1 194 3.26e-85 266
MS.gene06587.t1 AT1G33060 64.948 194 62 2 20 207 1 194 3.45e-85 266
MS.gene06587.t1 AT5G24590 57.346 211 79 4 26 235 2 202 4.75e-79 245
MS.gene06587.t1 AT3G49530 57.868 197 77 2 31 226 7 198 1.68e-78 242
MS.gene06587.t1 AT3G49530 57.868 197 77 2 31 226 7 198 2.22e-78 243
MS.gene06587.t1 AT1G65910 54.438 169 77 0 36 204 5 173 1.14e-60 201
MS.gene06587.t1 AT3G17730 52.514 179 80 1 37 210 6 184 6.59e-60 189
MS.gene06587.t1 AT5G17260 59.477 153 61 1 36 187 5 157 8.00e-58 191
MS.gene06587.t1 AT3G03200 58.824 153 62 1 36 187 5 157 1.14e-56 187
MS.gene06587.t1 AT3G10490 54.487 156 70 1 35 189 25 180 1.98e-55 177
MS.gene06587.t1 AT3G10480 53.125 160 75 0 30 189 20 179 1.23e-54 181
MS.gene06587.t1 AT3G10480 53.988 163 70 2 30 189 20 180 1.57e-54 181
MS.gene06587.t1 AT1G54330 54.902 153 66 1 36 188 5 154 2.58e-54 177
MS.gene06587.t1 AT3G10490 54.839 155 69 1 36 189 26 180 4.14e-54 180
MS.gene06587.t1 AT3G10500 53.846 156 72 0 33 188 5 160 3.46e-53 180
MS.gene06587.t1 AT4G17980 43.590 234 102 7 35 240 4 235 4.72e-53 172
MS.gene06587.t1 AT1G12260 51.923 156 72 3 33 187 3 156 1.16e-52 174
MS.gene06587.t1 AT4G17980 43.590 234 102 7 35 240 4 235 1.71e-52 172
MS.gene06587.t1 AT1G12260 51.923 156 72 3 33 187 3 156 2.77e-52 174
MS.gene06587.t1 AT1G62700 51.282 156 73 3 33 187 3 156 5.48e-52 173
MS.gene06587.t1 AT1G62700 51.282 156 73 3 33 187 3 156 5.48e-52 173
MS.gene06587.t1 AT5G04410 51.923 156 75 0 33 188 5 160 1.18e-51 176
MS.gene06587.t1 AT5G46590 54.140 157 66 3 37 189 6 160 4.07e-51 168
MS.gene06587.t1 AT5G62380 47.879 165 83 2 33 196 3 165 5.17e-51 169
MS.gene06587.t1 AT5G62380 47.879 165 83 2 33 196 3 165 5.17e-51 169
MS.gene06587.t1 AT2G27300 50.625 160 71 3 30 189 7 158 6.13e-51 169
MS.gene06587.t1 AT2G18060 50.980 153 72 2 36 187 8 158 1.98e-50 169
MS.gene06587.t1 AT2G18060 50.980 153 72 2 36 187 8 158 1.98e-50 169
MS.gene06587.t1 AT4G10350 47.531 162 84 1 29 189 1 162 1.09e-49 166
MS.gene06587.t1 AT5G66300 49.673 153 75 2 36 187 11 162 2.21e-49 164
MS.gene06587.t1 AT3G44290 50.993 151 65 3 40 190 17 158 3.33e-49 161
MS.gene06587.t1 AT4G36160 49.020 153 75 2 36 187 9 159 5.01e-49 165
MS.gene06587.t1 AT4G36160 49.020 153 75 2 36 187 9 159 5.01e-49 165
MS.gene06587.t1 AT4G36160 49.020 153 75 2 36 187 13 163 5.67e-49 165
MS.gene06587.t1 AT1G71930 49.351 154 75 2 35 187 7 158 2.19e-48 162
MS.gene06587.t1 AT1G71930 49.351 154 75 2 35 187 7 158 2.19e-48 162
MS.gene06587.t1 AT5G22290 50.331 151 67 3 40 190 24 166 2.43e-48 162
MS.gene06587.t1 AT1G33280 49.351 154 74 2 37 189 8 158 4.04e-48 161
MS.gene06587.t1 AT5G46590 58.594 128 52 1 37 163 6 133 4.72e-48 160
MS.gene06587.t1 AT3G44290 50.993 151 65 3 40 190 17 158 6.26e-48 161
MS.gene06587.t1 AT3G18400 50.980 153 70 3 37 188 5 153 8.59e-48 160
MS.gene06587.t1 AT2G33480 51.656 151 68 1 37 187 15 160 9.76e-48 159
MS.gene06587.t1 AT3G10480 44.898 196 70 3 30 189 20 213 1.59e-47 164
MS.gene06587.t1 AT5G07680 43.069 202 89 5 37 219 3 197 1.88e-47 159
MS.gene06587.t1 AT5G61430 50.649 154 72 2 37 188 16 167 2.84e-47 159
MS.gene06587.t1 AT5G07680 43.069 202 89 5 37 219 17 211 3.03e-47 159
MS.gene06587.t1 AT5G39610 50.000 160 76 2 37 194 20 177 1.09e-46 157
MS.gene06587.t1 AT4G27410 45.402 174 88 2 36 204 13 184 1.16e-46 157
MS.gene06587.t1 AT2G33480 51.656 151 66 2 37 187 15 158 1.69e-46 155
MS.gene06587.t1 AT1G69490 39.713 209 115 4 29 233 1 202 2.78e-46 155
MS.gene06587.t1 AT2G24430 50.633 158 73 3 36 191 15 169 4.41e-46 156
MS.gene06587.t1 AT2G24430 50.633 158 73 3 36 191 15 169 4.41e-46 156
MS.gene06587.t1 AT1G34180 51.007 149 73 0 40 188 19 167 7.25e-46 159
MS.gene06587.t1 AT1G32510 47.273 165 79 2 37 193 6 170 8.21e-46 154
MS.gene06587.t1 AT1G34180 51.007 149 73 0 40 188 19 167 2.54e-45 159
MS.gene06587.t1 AT1G32770 37.104 221 126 4 25 234 4 222 2.72e-45 155
MS.gene06587.t1 AT2G46770 43.575 179 84 4 28 189 4 182 6.62e-45 154
MS.gene06587.t1 AT1G52890 49.367 158 74 3 36 191 13 166 8.55e-45 152
MS.gene06587.t1 AT3G15500 50.000 154 71 3 36 187 13 162 1.03e-44 152
MS.gene06587.t1 AT5G64060 45.455 154 84 0 35 188 4 157 1.41e-44 153
MS.gene06587.t1 AT1G34190 51.678 149 72 0 40 188 19 167 1.54e-44 157
MS.gene06587.t1 AT3G29035 57.480 127 52 1 37 163 24 148 1.65e-44 152
MS.gene06587.t1 AT3G15170 49.068 161 66 4 37 188 20 173 5.62e-44 150
MS.gene06587.t1 AT3G04060 45.198 177 82 4 37 205 20 189 6.66e-44 151
MS.gene06587.t1 AT5G09330 47.651 149 78 0 40 188 9 157 6.68e-44 154
MS.gene06587.t1 AT5G09330 47.651 149 78 0 40 188 9 157 6.68e-44 154
MS.gene06587.t1 AT5G09330 47.651 149 78 0 40 188 9 157 6.68e-44 154
MS.gene06587.t1 AT5G09330 47.651 149 78 0 40 188 9 157 6.68e-44 154
MS.gene06587.t1 AT5G09330 47.651 149 78 0 40 188 9 157 6.68e-44 154
MS.gene06587.t1 AT4G27410 42.328 189 89 2 36 204 13 201 1.11e-43 150
MS.gene06587.t1 AT2G02450 49.333 150 69 4 40 187 54 198 1.27e-43 151
MS.gene06587.t1 AT1G76420 49.673 153 72 3 37 187 22 171 1.71e-43 150
MS.gene06587.t1 AT5G08790 42.623 183 93 4 37 212 7 184 1.99e-43 148
MS.gene06587.t1 AT2G02450 49.333 150 69 4 40 187 54 198 2.13e-43 151
MS.gene06587.t1 AT5G18270 49.689 161 76 3 34 191 18 176 2.14e-43 149
MS.gene06587.t1 AT1G01720 46.250 160 75 4 34 187 4 158 5.40e-43 147
MS.gene06587.t1 AT5G18270 49.068 161 77 3 34 191 18 176 6.01e-43 148
MS.gene06587.t1 AT1G56010 41.538 195 94 6 37 216 19 208 7.53e-43 148
MS.gene06587.t1 AT3G12977 44.509 173 90 5 24 194 6 174 1.01e-42 146
MS.gene06587.t1 AT5G13180 44.578 166 82 4 25 187 2 160 1.07e-42 145
MS.gene06587.t1 AT3G04070 41.361 191 92 6 35 207 8 196 1.14e-42 148
MS.gene06587.t1 AT3G61910 43.114 167 81 2 37 189 11 177 2.00e-42 147
MS.gene06587.t1 AT1G34180 47.205 161 73 1 40 188 19 179 2.01e-42 150
MS.gene06587.t1 AT5G53950 49.068 161 66 4 37 188 17 170 2.91e-42 147
MS.gene06587.t1 AT1G34180 47.205 161 73 1 40 188 19 179 6.59e-42 150
MS.gene06587.t1 AT1G79580 45.570 158 79 4 36 190 16 169 2.34e-41 145
MS.gene06587.t1 AT1G79580 45.570 158 79 4 36 190 16 169 2.34e-41 145
MS.gene06587.t1 AT1G79580 45.570 158 79 4 36 190 16 169 2.34e-41 145
MS.gene06587.t1 AT1G79580 45.570 158 79 4 36 190 16 169 2.34e-41 145
MS.gene06587.t1 AT1G79580 45.570 158 79 4 36 190 16 169 2.34e-41 145
MS.gene06587.t1 AT1G26870 41.104 163 83 3 40 191 19 179 3.00e-41 145
MS.gene06587.t1 AT5G63790 45.283 159 75 4 36 187 59 212 3.36e-41 143
MS.gene06587.t1 AT5G63790 45.283 159 75 4 36 187 49 202 3.44e-41 143
MS.gene06587.t1 AT1G77450 43.590 156 78 4 37 187 10 160 4.92e-41 141
MS.gene06587.t1 AT2G43000 42.581 155 85 3 35 187 15 167 7.20e-41 141
MS.gene06587.t1 AT3G15510 42.012 169 83 3 41 196 21 187 1.63e-40 142
MS.gene06587.t1 AT1G61110 44.242 165 77 4 37 188 16 178 1.73e-40 142
MS.gene06587.t1 AT2G17040 45.695 151 72 3 40 187 9 152 3.00e-40 140
MS.gene06587.t1 AT3G04070 39.130 207 90 7 35 207 8 212 3.11e-40 142
MS.gene06587.t1 AT5G39820 41.040 173 77 5 40 189 23 193 3.31e-40 141
MS.gene06587.t1 AT5G04395 46.479 142 62 2 35 162 26 167 1.35e-38 133
MS.gene06587.t1 AT4G28530 37.838 222 107 6 37 233 10 225 1.09e-37 135
MS.gene06587.t1 AT1G32870 46.429 168 86 2 23 188 32 197 1.11e-37 138
MS.gene06587.t1 AT1G32870 49.351 154 74 2 37 188 10 161 1.67e-37 137
MS.gene06587.t1 AT1G32870 49.351 154 74 2 37 188 10 161 1.75e-37 137
MS.gene06587.t1 AT4G01550 44.872 156 77 3 39 190 6 156 1.70e-34 128
MS.gene06587.t1 AT1G52880 42.945 163 79 4 41 191 21 181 2.41e-34 125
MS.gene06587.t1 AT1G02230 39.181 171 89 7 38 202 4 165 4.39e-34 125
MS.gene06587.t1 AT4G01520 40.491 163 86 5 38 195 5 161 7.41e-33 121
MS.gene06587.t1 AT5G22380 35.838 173 104 4 35 200 3 175 3.11e-32 118
MS.gene06587.t1 AT4G01540 39.506 162 87 5 39 195 6 161 5.58e-31 118
MS.gene06587.t1 AT3G12910 37.427 171 83 5 40 191 24 189 7.18e-31 116
MS.gene06587.t1 AT4G01540 39.506 162 87 5 39 195 6 161 8.19e-31 118
MS.gene06587.t1 AT4G01540 39.506 162 87 5 39 195 6 161 8.93e-31 118
MS.gene06587.t1 AT4G01540 39.506 162 87 5 39 195 6 161 1.15e-30 118
MS.gene06587.t1 AT3G12977 50.000 102 50 1 94 194 20 121 1.60e-30 113
MS.gene06587.t1 AT5G61430 51.923 104 48 1 87 188 1 104 2.66e-30 114
MS.gene06587.t1 AT3G44350 38.125 160 94 4 37 191 5 164 2.73e-30 113
MS.gene06587.t1 AT4G10350 48.454 97 50 0 93 189 19 115 5.86e-30 113
MS.gene06587.t1 AT3G04420 39.490 157 82 4 38 189 4 152 9.93e-30 112
MS.gene06587.t1 AT3G04420 39.490 157 82 4 38 189 4 152 1.19e-29 114
MS.gene06587.t1 AT1G02250 37.714 175 94 7 38 205 4 170 2.78e-29 113
MS.gene06587.t1 AT2G33480 48.544 103 53 0 85 187 1 103 3.39e-29 109
MS.gene06587.t1 AT3G44350 41.985 131 72 3 37 163 5 135 4.96e-29 107
MS.gene06587.t1 AT1G01010 38.650 163 83 5 39 191 5 160 3.83e-27 108
MS.gene06587.t1 AT1G56010 42.336 137 62 4 94 216 8 141 4.76e-27 105
MS.gene06587.t1 AT3G10490 62.500 80 29 1 111 189 1 80 5.42e-27 106
MS.gene06587.t1 AT3G10490 62.500 80 29 1 111 189 1 80 5.42e-27 106
MS.gene06587.t1 AT1G02220 38.411 151 81 4 38 185 4 145 4.15e-25 102
MS.gene06587.t1 AT2G18060 55.714 70 29 1 118 187 3 70 1.50e-21 90.9
MS.gene06587.t1 AT4G28530 43.119 109 44 2 37 129 10 116 1.95e-19 85.9
MS.gene06587.t1 AT5G22290 52.703 74 28 2 117 190 1 67 1.27e-18 82.4
MS.gene06587.t1 AT5G64530 33.594 128 69 4 37 162 3 116 9.67e-18 77.8
MS.gene06587.t1 AT5G64530 28.402 169 91 5 36 188 2 156 1.13e-17 78.6
MS.gene06587.t1 AT2G43000 43.182 88 45 3 103 187 4 89 1.83e-17 78.2
MS.gene06587.t1 AT3G56530 28.947 152 103 3 36 185 51 199 3.41e-16 76.6
MS.gene06587.t1 AT3G55210 29.630 162 96 5 37 185 11 167 1.19e-15 74.7
MS.gene06587.t1 AT3G04430 34.559 136 75 5 43 166 6 139 5.72e-15 71.6
MS.gene06587.t1 AT5G50820 30.714 140 79 5 32 163 8 137 7.93e-13 65.5
MS.gene06587.t1 AT4G28500 31.081 148 80 8 34 163 56 199 1.83e-12 65.9
MS.gene06587.t1 AT5G14000 28.906 128 85 2 37 162 15 138 4.83e-12 62.4
MS.gene06587.t1 AT1G28470 30.612 147 81 6 34 163 74 216 1.07e-11 63.9
MS.gene06587.t1 AT5G14000 28.906 128 85 2 37 162 15 138 1.77e-11 62.0

Find 77 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACGGGAGGAGGTCTAAT+TGG 0.260288 3.3:-77644714 MS.gene06587:CDS
TGATCGGATTGTATTTCTTC+TGG 0.268816 3.3:+77644447 None:intergenic
CACCACAGTTTGAAACTTCA+AGG 0.314433 3.3:+77644493 None:intergenic
CGGCAATGGTGACGAGGTTC+AGG 0.330226 3.3:-77645494 MS.gene06587:CDS
TGGTTCCATCAAGCTCCTTA+AGG 0.335266 3.3:+77644668 None:intergenic
CTGTTCAATTGATTCCCATT+TGG 0.340310 3.3:+77644847 None:intergenic
CTCTGAGATACCAGGGATAA+TGG 0.352390 3.3:+77644371 None:intergenic
TACCTTCGTTCAAAGATTAA+CGG 0.367630 3.3:-77645514 MS.gene06587:CDS
AAATCTGGAACCATCTTGAT+TGG 0.370088 3.3:-77644775 MS.gene06587:CDS
GAGAAACAAATCTTGGATAC+TGG 0.371022 3.3:-77644825 MS.gene06587:CDS
CTTGGATACTGGAAGGCAAC+AGG 0.379088 3.3:-77644814 MS.gene06587:CDS
ATTTGCAGACATCGATTTCT+CGG 0.380065 3.3:+77645467 None:intergenic
AAGGATCGTAAAATCAAATC+TGG 0.393585 3.3:-77644790 MS.gene06587:CDS
GGTTCCATCAAGCTCCTTAA+GGG 0.401742 3.3:+77644669 None:intergenic
CTCATGCTACTATGCTACTT+GGG 0.405033 3.3:-77647247 MS.gene06587:CDS
CCCACCCTTAAGGAGCTTGA+TGG 0.417142 3.3:-77644673 MS.gene06587:CDS
CCTCATCCGTAGGTCGGAAT+CGG 0.430430 3.3:+77645551 None:intergenic
GAGAAATCGATGTCTGCAAA+TGG 0.434739 3.3:-77645465 MS.gene06587:CDS
TTGAACAGAGAAACAAATCT+TGG 0.440140 3.3:-77644832 MS.gene06587:CDS
TATAGAGAATGGACCTGTCC+TGG 0.443846 3.3:+77644643 None:intergenic
CTCTGAATTCGCTTCCGCTA+GGG 0.457860 3.3:-77645576 MS.gene06587:CDS
CAGGATCGGCAATATCCAAA+TGG 0.459432 3.3:-77644862 MS.gene06587:CDS
TCTCTGAATTCGCTTCCGCT+AGG 0.459745 3.3:-77645577 MS.gene06587:CDS
GGGCTGCAAAGTTGCTCAAT+CGG 0.460596 3.3:-77647226 MS.gene06587:CDS
CGAGTATCGTCCCACCCTTA+AGG 0.461017 3.3:-77644683 MS.gene06587:CDS
ACATTGGTCGTGCACCTAAC+GGG 0.464123 3.3:-77644729 MS.gene06587:CDS
TAACGGGAGGAGGTCTAATT+GGG 0.468912 3.3:-77644713 MS.gene06587:CDS
GCTCATGCTACTATGCTACT+TGG 0.470404 3.3:-77647248 MS.gene06587:CDS
AACTGTAATGGGAGCTTGAT+CGG 0.483644 3.3:+77644431 None:intergenic
TACATTGGTCGTGCACCTAA+CGG 0.487095 3.3:-77644730 MS.gene06587:CDS
AGAAATACTGGGCATATCCC+AGG 0.487442 3.3:+77645438 None:intergenic
AAGCAGCTGGCCATTATCCC+TGG 0.495297 3.3:-77644381 MS.gene06587:CDS
GTGGTTCTTCTTCTATCCAC+AGG 0.505437 3.3:-77644881 MS.gene06587:CDS
CAATTAGACCTCCTCCCGTT+AGG 0.505976 3.3:+77644715 None:intergenic
CTGTGATGTTGAAACTGTAA+TGG 0.513575 3.3:+77644419 None:intergenic
AATCTGGAACCATCTTGATT+GGG 0.516096 3.3:-77644774 MS.gene06587:CDS
AGAAATCGATGTCTGCAAAT+GGG 0.517216 3.3:-77645464 MS.gene06587:CDS
GAAGTTTCAAACTGTGGTGA+AGG 0.519573 3.3:-77644489 MS.gene06587:CDS
CCGATTCCGACCTACGGATG+AGG 0.523382 3.3:-77645551 MS.gene06587:CDS
AAGTTTCAAACTGTGGTGAA+GGG 0.526196 3.3:-77644488 MS.gene06587:CDS
CTTCTTCATCCCAATCAAGA+TGG 0.530609 3.3:+77644765 None:intergenic
TGTGATGTTGAAACTGTAAT+GGG 0.530645 3.3:+77644420 None:intergenic
AGGATCGGCAATATCCAAAT+GGG 0.531502 3.3:-77644861 MS.gene06587:CDS
ATGTCTGCAAATGGGAACCC+TGG 0.541418 3.3:-77645456 MS.gene06587:CDS
CAGAGAAGAGGATAAGCAGC+TGG 0.546645 3.3:-77644394 MS.gene06587:CDS
AAAGTTAATGGCAGAATGCA+TGG 0.551199 3.3:-77647284 None:intergenic
CGTTCAAAGATTAACGGCAA+TGG 0.564311 3.3:-77645508 MS.gene06587:CDS
TCCATCAAGCTCCTTAAGGG+TGG 0.570617 3.3:+77644672 None:intergenic
ATAGAGAATGGACCTGTCCT+GGG 0.571682 3.3:+77644644 None:intergenic
TGATGGAACCAACCCAGGAC+AGG 0.574453 3.3:-77644656 MS.gene06587:intron
CATTACAGTTTCAACATCAC+AGG 0.574812 3.3:-77644418 MS.gene06587:CDS
TCTATAAGTTCCTCATCCGT+AGG 0.579136 3.3:+77645541 None:intergenic
TGTCTGCAAATGGGAACCCT+GGG 0.583473 3.3:-77645455 MS.gene06587:CDS
TTTGGATATTGCCGATCCTG+TGG 0.585066 3.3:+77644865 None:intergenic
TCTTCTTCTATCCACAGGAT+CGG 0.587304 3.3:-77644876 MS.gene06587:CDS
AGGGTTCCGATTCCGACCTA+CGG 0.594356 3.3:-77645557 MS.gene06587:CDS
AGAATGGACCTGTCCTGGGT+TGG 0.599825 3.3:+77644648 None:intergenic
AACAAATCTTGGATACTGGA+AGG 0.600211 3.3:-77644821 MS.gene06587:CDS
AGTTTCAAACTGTGGTGAAG+GGG 0.601390 3.3:-77644487 MS.gene06587:CDS
CCATCAAGCTCCTTAAGGGT+GGG 0.602064 3.3:+77644673 None:intergenic
GTCGTGCACCTAACGGGAGG+AGG 0.604113 3.3:-77644723 MS.gene06587:CDS
TGCCGTTAATCTTTGAACGA+AGG 0.604752 3.3:+77645512 None:intergenic
GAGCTTGATGGAACCAACCC+AGG 0.606347 3.3:-77644661 MS.gene06587:CDS
TCATGCTACTATGCTACTTG+GGG 0.608804 3.3:-77647246 MS.gene06587:CDS
AACATCACAGGTCAGAGAAG+AGG 0.609131 3.3:-77644406 MS.gene06587:CDS
AATGGCAGAATGCATGGTTG+TGG 0.615291 3.3:-77647278 None:intergenic
TTGGATACTGGAAGGCAACA+GGG 0.615969 3.3:-77644813 MS.gene06587:CDS
GTATCTCAGAGGAAAAGTGA+TGG 0.620521 3.3:-77644359 None:intergenic
AGCCTTGAAGTTTCAAACTG+TGG 0.630939 3.3:-77644495 MS.gene06587:CDS
TAAGTTCCTCATCCGTAGGT+CGG 0.631642 3.3:+77645545 None:intergenic
GAAATACTGGGCATATCCCA+GGG 0.643646 3.3:+77645439 None:intergenic
GATTAACGGCAATGGTGACG+AGG 0.653308 3.3:-77645500 MS.gene06587:CDS
ATACTGGAAGGCAACAGGGA+AGG 0.655689 3.3:-77644809 MS.gene06587:CDS
TTGGTCGTGCACCTAACGGG+AGG 0.685469 3.3:-77644726 MS.gene06587:CDS
CATTATCCCTGGTATCTCAG+AGG 0.695429 3.3:-77644370 MS.gene06587:CDS
TAAAAGACGACGACTCAGAG+TGG 0.709699 3.3:-77644900 MS.gene06587:CDS
GGTCGGAATCGGAACCCTAG+CGG 0.740333 3.3:+77645562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAATTTCATTTTATATTA+TGG - chr3.3:77645977-77645996 MS.gene06587:intron 10.0%
!!! TTTATATAAACTTTTCATTA+TGG + chr3.3:77644920-77644939 None:intergenic 10.0%
!! AAAGTTTATATAAAGTAGAA+TGG - chr3.3:77644926-77644945 MS.gene06587:intron 15.0%
!! TGATTTGACATAATAAAAAT+AGG + chr3.3:77647023-77647042 None:intergenic 15.0%
!!! AGTCAATATTTTTAAAGTAT+CGG + chr3.3:77645620-77645639 None:intergenic 15.0%
!!! ATATTTAACCAATCAAATTT+TGG + chr3.3:77645863-77645882 None:intergenic 15.0%
!!! ATTTCATTTTATATTATGGA+TGG - chr3.3:77645981-77646000 MS.gene06587:intron 15.0%
!!! CTTACTGATTTTTTTTTTTT+TGG - chr3.3:77645724-77645743 MS.gene06587:intron 15.0%
!!! TGTCAATTTTTTGATTATTT+TGG - chr3.3:77644491-77644510 MS.gene06587:CDS 15.0%
!! AAAAAAGAAAAGAGAAATAC+TGG + chr3.3:77646208-77646227 None:intergenic 20.0%
!! AAAAAGAAAAGAGAAATACT+GGG + chr3.3:77646207-77646226 None:intergenic 20.0%
!! ACGAATTATAAAATGAAAGA+CGG + chr3.3:77644659-77644678 None:intergenic 20.0%
!! ATAGCTTAATTAAATGTTCA+TGG + chr3.3:77646559-77646578 None:intergenic 20.0%
!! ATGTTAAATGTTTGACAAAA+TGG - chr3.3:77644586-77644605 MS.gene06587:intron 20.0%
!! CAAACAAATAGTTAGTTAAT+TGG + chr3.3:77644524-77644543 None:intergenic 20.0%
!! CAATTAACTAACTATTTGTT+TGG - chr3.3:77644522-77644541 MS.gene06587:CDS 20.0%
!! GGTTAAATATTCTATTTGAT+TGG - chr3.3:77645900-77645919 MS.gene06587:intron 20.0%
!!! ATATCGTACTTTAATTTGAT+TGG - chr3.3:77645879-77645898 MS.gene06587:intron 20.0%
!!! ATTAAGCTATTTTATCCTAA+AGG + chr3.3:77645024-77645043 None:intergenic 20.0%
!!! ATTTTTTAGGTAAAAGTTGT+CGG - chr3.3:77645449-77645468 MS.gene06587:CDS 20.0%
!!! TCTAGTTTTTTTTTGGTTAT+AGG - chr3.3:77646508-77646527 MS.gene06587:intron 20.0%
!!! TTTGATTGGTTAATACTTTT+CGG - chr3.3:77645914-77645933 MS.gene06587:intron 20.0%
! AACATTTAACATGAACACTA+AGG + chr3.3:77644578-77644597 None:intergenic 25.0%
! AAGCATTATTATAGACATCA+TGG + chr3.3:77645707-77645726 None:intergenic 25.0%
! CATAATGAACTAACACAATA+CGG - chr3.3:77644550-77644569 MS.gene06587:intron 25.0%
! CGAATTATAAAATGAAAGAC+GGG + chr3.3:77644658-77644677 None:intergenic 25.0%
! GTATTGTGTTAGTTCATTAT+GGG + chr3.3:77644551-77644570 None:intergenic 25.0%
! GTTGTAACTAAATGTTATGA+TGG + chr3.3:77645656-77645675 None:intergenic 25.0%
!! AAGTTCTTTTATCATTTGTG+AGG + chr3.3:77645327-77645346 None:intergenic 25.0%
!! ACAGTTCTTTTTAATGCAAA+GGG + chr3.3:77645264-77645283 None:intergenic 25.0%
!! GTTACAACAAGATCTTTTTA+AGG - chr3.3:77645668-77645687 MS.gene06587:intron 25.0%
!! TAAACTTTTCATTATGGATG+CGG + chr3.3:77644914-77644933 None:intergenic 25.0%
!!! AAGACATTAGTTTTCTACAT+TGG - chr3.3:77646886-77646905 MS.gene06587:intron 25.0%
!!! GCTGATTTTTTTTTATCTCT+TGG - chr3.3:77646675-77646694 MS.gene06587:intron 25.0%
!!! TTGATTGGTTAATACTTTTC+GGG - chr3.3:77645915-77645934 MS.gene06587:intron 25.0%
AACTATCTACTACACAACTT+TGG - chr3.3:77644831-77644850 MS.gene06587:CDS 30.0%
AAGGATCGTAAAATCAAATC+TGG - chr3.3:77646841-77646860 MS.gene06587:intron 30.0%
AATAGACTGAAAACAACTTG+TGG + chr3.3:77646415-77646434 None:intergenic 30.0%
ACTATCTACTACACAACTTT+GGG - chr3.3:77644832-77644851 MS.gene06587:CDS 30.0%
AGCATTTGTGAAATTGTTTG+AGG - chr3.3:77646362-77646381 MS.gene06587:intron 30.0%
CGTATTGTGTTAGTTCATTA+TGG + chr3.3:77644552-77644571 None:intergenic 30.0%
GGAGAGAATATTATAGAGAA+TGG + chr3.3:77647002-77647021 None:intergenic 30.0%
TAAACAACGAAAACAGTCTA+AGG + chr3.3:77646596-77646615 None:intergenic 30.0%
TACCTTCGTTCAAAGATTAA+CGG - chr3.3:77646117-77646136 MS.gene06587:intron 30.0%
TGAGGATTTGAGTAACATAT+AGG - chr3.3:77646628-77646647 MS.gene06587:intron 30.0%
TGTGAGTTAGTAGATTATCT+AGG - chr3.3:77644803-77644822 MS.gene06587:CDS 30.0%
TGTGATGTTGAAACTGTAAT+GGG + chr3.3:77647214-77647233 None:intergenic 30.0%
TGTTTAAGGAATAGATCATG+AGG - chr3.3:77646610-77646629 MS.gene06587:intron 30.0%
TTACCAAATCATAACTTCAC+CGG - chr3.3:77644872-77644891 MS.gene06587:CDS 30.0%
TTCAACTTTACCAAATCAAG+AGG + chr3.3:77646245-77646264 None:intergenic 30.0%
TTCACAAATGCTTATGTAAG+TGG + chr3.3:77646354-77646373 None:intergenic 30.0%
TTGAACAGAGAAACAAATCT+TGG - chr3.3:77646799-77646818 MS.gene06587:intron 30.0%
! ATGGTTAGCCAAAATTTGAT+TGG - chr3.3:77645852-77645871 MS.gene06587:intron 30.0%
! ATTTGGTAATTAGCATGTCA+TGG + chr3.3:77644861-77644880 None:intergenic 30.0%
! CACAGTTCTTTTTAATGCAA+AGG + chr3.3:77645265-77645284 None:intergenic 30.0%
! GGCTACATCATTTGAAATAT+TGG - chr3.3:77645520-77645539 MS.gene06587:CDS 30.0%
! TAGACTGTTTTCGTTGTTTA+AGG - chr3.3:77646596-77646615 MS.gene06587:intron 30.0%
! TATAGATTTTAAGCCTAGTG+TGG - chr3.3:77645051-77645070 MS.gene06587:intron 30.0%
! TTAGTAAGTTGGATCTAGTT+GGG + chr3.3:77644984-77645003 None:intergenic 30.0%
! TTCTTTTTAATGCAAAGGGT+CGG + chr3.3:77645260-77645279 None:intergenic 30.0%
! TTTAGTAAGTTGGATCTAGT+TGG + chr3.3:77644985-77645004 None:intergenic 30.0%
!! TTTATCTCTTGGTTTGTGTT+GGG - chr3.3:77646686-77646705 MS.gene06587:intron 30.0%
!!! CAACGACTCTAGTTTTTTTT+TGG - chr3.3:77646501-77646520 MS.gene06587:intron 30.0%
!!! CGAATATTTTAACTGTGAAG+AGG + chr3.3:77645577-77645596 None:intergenic 30.0%
!!! TTTTATCTCTTGGTTTGTGT+TGG - chr3.3:77646685-77646704 MS.gene06587:intron 30.0%
AACAAATCTTGGATACTGGA+AGG - chr3.3:77646810-77646829 MS.gene06587:intron 35.0%
AAGTTTCAAACTGTGGTGAA+GGG - chr3.3:77647143-77647162 MS.gene06587:intron 35.0%
AGAAATCGATGTCTGCAAAT+GGG - chr3.3:77646167-77646186 MS.gene06587:intron 35.0%
AGGTTAAGTAGTTATCTAGC+AGG + chr3.3:77644761-77644780 None:intergenic 35.0%
CACATTATCTCCTCTTGATT+TGG - chr3.3:77646232-77646251 MS.gene06587:intron 35.0%
CATTACAGTTTCAACATCAC+AGG - chr3.3:77647213-77647232 MS.gene06587:CDS 35.0%
CTGTGATGTTGAAACTGTAA+TGG + chr3.3:77647215-77647234 None:intergenic 35.0%
GAAATTGTTTGAGGAGCTTA+TGG - chr3.3:77646371-77646390 MS.gene06587:intron 35.0%
GAGAAACAAATCTTGGATAC+TGG - chr3.3:77646806-77646825 MS.gene06587:intron 35.0%
GAGCTGAACATTTAGTAAGT+TGG + chr3.3:77644995-77645014 None:intergenic 35.0%
GCACATATGCTTTCTGATAT+AGG + chr3.3:77647087-77647106 None:intergenic 35.0%
GGTTAAGTAGTTATCTAGCA+GGG + chr3.3:77644760-77644779 None:intergenic 35.0%
TGAAATGCTAGATTAGCAAG+AGG - chr3.3:77645784-77645803 MS.gene06587:intron 35.0%
TGATCGGATTGTATTTCTTC+TGG + chr3.3:77647187-77647206 None:intergenic 35.0%
TGCTGTTCATAATGATGCTA+CGG - chr3.3:77645373-77645392 MS.gene06587:intron 35.0%
TGTGTTCCAAATTGGATTTC+TGG - chr3.3:77644682-77644701 MS.gene06587:CDS 35.0%
! AAATCTGGAACCATCTTGAT+TGG - chr3.3:77646856-77646875 MS.gene06587:intron 35.0%
! AATCTGGAACCATCTTGATT+GGG - chr3.3:77646857-77646876 MS.gene06587:intron 35.0%
! CTGTTCAATTGATTCCCATT+TGG + chr3.3:77646787-77646806 None:intergenic 35.0%
! GAAATCCAATTTGGAACACA+TGG + chr3.3:77644682-77644701 None:intergenic 35.0%
!! AAACAGTCTAAGGTCTTGTT+TGG + chr3.3:77646586-77646605 None:intergenic 35.0%
!! ATTTGCAGACATCGATTTCT+CGG + chr3.3:77646167-77646186 None:intergenic 35.0%
!! CAAATTGGATTTCTGGTTTG+GGG - chr3.3:77644689-77644708 MS.gene06587:CDS 35.0%
!! CCAAATTGGATTTCTGGTTT+GGG - chr3.3:77644688-77644707 MS.gene06587:CDS 35.0%
!! TCCAAATTGGATTTCTGGTT+TGG - chr3.3:77644687-77644706 MS.gene06587:CDS 35.0%
AAGCTTTCCATGATAGCTGA+TGG - chr3.3:77646440-77646459 MS.gene06587:intron 40.0%
AGATTCAGTGTGATTGTGGA+AGG + chr3.3:77644781-77644800 None:intergenic 40.0%
AGCCTTGAAGTTTCAAACTG+TGG - chr3.3:77647136-77647155 MS.gene06587:intron 40.0%
AGGATCGGCAATATCCAAAT+GGG - chr3.3:77646770-77646789 MS.gene06587:intron 40.0%
AGTTTCAAACTGTGGTGAAG+GGG - chr3.3:77647144-77647163 MS.gene06587:intron 40.0%
ATGCATAGATCGCATGCTTA+GGG - chr3.3:77646303-77646322 MS.gene06587:intron 40.0%
ATGCTTACTGTTACGAGATG+CGG - chr3.3:77645755-77645774 MS.gene06587:intron 40.0%
ATTCCGACCCTTGCATTAAA+GGG - chr3.3:77645135-77645154 MS.gene06587:intron 40.0%
CACAGTTCCCTTTAATGCAA+GGG + chr3.3:77645145-77645164 None:intergenic 40.0%
CCCAAACCAGAAATCCAATT+TGG + chr3.3:77644691-77644710 None:intergenic 40.0%
CGTTCAAAGATTAACGGCAA+TGG - chr3.3:77646123-77646142 MS.gene06587:intron 40.0%
CTAACCATACATGAGACAGT+TGG + chr3.3:77645840-77645859 None:intergenic 40.0%
CTACCTACATCTTTCTTGTG+AGG + chr3.3:77645201-77645220 None:intergenic 40.0%
CTTCCGGTGAAGTTATGATT+TGG + chr3.3:77644878-77644897 None:intergenic 40.0%
CTTCTTCATCCCAATCAAGA+TGG + chr3.3:77646869-77646888 None:intergenic 40.0%
GAAGTTTCAAACTGTGGTGA+AGG - chr3.3:77647142-77647161 MS.gene06587:intron 40.0%
GAGAAATCGATGTCTGCAAA+TGG - chr3.3:77646166-77646185 MS.gene06587:intron 40.0%
GTTCAGCTCTTTGTTCCTTT+AGG - chr3.3:77645006-77645025 MS.gene06587:intron 40.0%
TAATGATGCTACGGCATCTA+CGG - chr3.3:77645382-77645401 MS.gene06587:intron 40.0%
TACCTACATCTAAGCCTTTC+TGG + chr3.3:77644725-77644744 None:intergenic 40.0%
TATGCAACAGCTTGTCTCAA+GGG - chr3.3:77645543-77645562 MS.gene06587:CDS 40.0%
TATGCATAGATCGCATGCTT+AGG - chr3.3:77646302-77646321 MS.gene06587:intron 40.0%
TCACAGTTCCCTTTAATGCA+AGG + chr3.3:77645146-77645165 None:intergenic 40.0%
TCGGCGCAAAAATAAGCTTA+AGG - chr3.3:77644424-77644443 MS.gene06587:CDS 40.0%
TCTATAAGTTCCTCATCCGT+AGG + chr3.3:77646093-77646112 None:intergenic 40.0%
TCTTCTTCTATCCACAGGAT+CGG - chr3.3:77646755-77646774 MS.gene06587:intron 40.0%
TGCCGTTAATCTTTGAACGA+AGG + chr3.3:77646122-77646141 None:intergenic 40.0%
TTCCACAATCACACTGAATC+TGG - chr3.3:77644780-77644799 MS.gene06587:CDS 40.0%
TTCGTCCATGTGTTCCAAAT+TGG - chr3.3:77644674-77644693 MS.gene06587:CDS 40.0%
! AACTGTAATGGGAGCTTGAT+CGG + chr3.3:77647203-77647222 None:intergenic 40.0%
! CACCACAGTTTGAAACTTCA+AGG + chr3.3:77647141-77647160 None:intergenic 40.0%
! CGGTTCAAGTTACTAACTTC+CGG + chr3.3:77644894-77644913 None:intergenic 40.0%
! CTCATGCTACTATGCTACTT+GGG - chr3.3:77644384-77644403 MS.gene06587:CDS 40.0%
! GTGTTTTGTCCATTGCTTGA+CGG - chr3.3:77646015-77646034 MS.gene06587:intron 40.0%
! GTTGTTTCCATCAGCTATCA+TGG + chr3.3:77646450-77646469 None:intergenic 40.0%
! TCATGCTACTATGCTACTTG+GGG - chr3.3:77644385-77644404 MS.gene06587:CDS 40.0%
!! AAAGTATCGGTTTCCCTTGA+GGG + chr3.3:77645607-77645626 None:intergenic 40.0%
!! GAAACATAGCATCGATTCCA+GGG - chr3.3:77645405-77645424 MS.gene06587:intron 40.0%
!! TAAAGTATCGGTTTCCCTTG+AGG + chr3.3:77645608-77645627 None:intergenic 40.0%
!! TAGGTAAAAGTTGTCGGCTT+AGG - chr3.3:77645455-77645474 MS.gene06587:CDS 40.0%
!!! ACTTTTCCTCTGAGATACCA+GGG + chr3.3:77647270-77647289 None:intergenic 40.0%
!!! AGCTGCTGGATGCATTTTTT+AGG - chr3.3:77645436-77645455 MS.gene06587:intron 40.0%
AACATCACAGGTCAGAGAAG+AGG - chr3.3:77647225-77647244 MS.gene06587:CDS 45.0%
AATGATGCTACGGCATCTAC+GGG - chr3.3:77645383-77645402 MS.gene06587:intron 45.0%
ACCATACATGAGACAGTTGG+CGG + chr3.3:77645837-77645856 None:intergenic 45.0%
AGAAATACTGGGCATATCCC+AGG + chr3.3:77646196-77646215 None:intergenic 45.0%
AGACTTCTATTCCAACCTGC+TGG - chr3.3:77645165-77645184 MS.gene06587:intron 45.0%
ATAGAGAATGGACCTGTCCT+GGG + chr3.3:77646990-77647009 None:intergenic 45.0%
ATGCATCCAGCAGCTGTAAA+AGG + chr3.3:77645431-77645450 None:intergenic 45.0%
CACCAGATTCAGTGTGATTG+TGG + chr3.3:77644785-77644804 None:intergenic 45.0%
CAGGATCGGCAATATCCAAA+TGG - chr3.3:77646769-77646788 MS.gene06587:intron 45.0%
CATTATCCCTGGTATCTCAG+AGG - chr3.3:77647261-77647280 MS.gene06587:CDS 45.0%
GAAATACTGGGCATATCCCA+GGG + chr3.3:77646195-77646214 None:intergenic 45.0%
GACTTCTATTCCAACCTGCT+GGG - chr3.3:77645166-77645185 MS.gene06587:intron 45.0%
GATTCCGACCCTTGCATTAA+AGG - chr3.3:77645134-77645153 MS.gene06587:intron 45.0%
GCTCATGCTACTATGCTACT+TGG - chr3.3:77644383-77644402 MS.gene06587:CDS 45.0%
GGATCTAGTTGGGACACTAT+TGG + chr3.3:77644974-77644993 None:intergenic 45.0%
GGTTCCATCAAGCTCCTTAA+GGG + chr3.3:77646965-77646984 None:intergenic 45.0%
GTATGCAACAGCTTGTCTCA+AGG - chr3.3:77645542-77645561 MS.gene06587:CDS 45.0%
GTGCCTCACAAGAAAGATGT+AGG - chr3.3:77645195-77645214 MS.gene06587:intron 45.0%
GTGGTTCTTCTTCTATCCAC+AGG - chr3.3:77646750-77646769 MS.gene06587:intron 45.0%
GTTCCCTTTAATGCAAGGGT+CGG + chr3.3:77645141-77645160 None:intergenic 45.0%
TAAAAGACGACGACTCAGAG+TGG - chr3.3:77646731-77646750 MS.gene06587:intron 45.0%
TAACGGGAGGAGGTCTAATT+GGG - chr3.3:77646918-77646937 MS.gene06587:intron 45.0%
TAAGTTCCTCATCCGTAGGT+CGG + chr3.3:77646089-77646108 None:intergenic 45.0%
TACATTGGTCGTGCACCTAA+CGG - chr3.3:77646901-77646920 MS.gene06587:intron 45.0%
TATAGAGAATGGACCTGTCC+TGG + chr3.3:77646991-77647010 None:intergenic 45.0%
TCAAATGATGTAGCCAGCAG+TGG + chr3.3:77645515-77645534 None:intergenic 45.0%
TGGTTCCATCAAGCTCCTTA+AGG + chr3.3:77646966-77646985 None:intergenic 45.0%
TTGGATACTGGAAGGCAACA+GGG - chr3.3:77646818-77646837 MS.gene06587:intron 45.0%
TTTGGATATTGCCGATCCTG+TGG + chr3.3:77646769-77646788 None:intergenic 45.0%
! TCTTTTCCAACCTGCTGAGA+AGG - chr3.3:77645290-77645309 MS.gene06587:intron 45.0%
!! AAGTATCGGTTTCCCTTGAG+GGG + chr3.3:77645606-77645625 None:intergenic 45.0%
!! CTCTGAGATACCAGGGATAA+TGG + chr3.3:77647263-77647282 None:intergenic 45.0%
!! GGAAACATAGCATCGATTCC+AGG - chr3.3:77645404-77645423 MS.gene06587:intron 45.0%
!! GTAAAAGTTGTCGGCTTAGG+TGG - chr3.3:77645458-77645477 MS.gene06587:CDS 45.0%
!! TTCTGGTTTGGGGTTAAGCA+TGG - chr3.3:77644699-77644718 MS.gene06587:CDS 45.0%
!!! CACTTTTCCTCTGAGATACC+AGG + chr3.3:77647271-77647290 None:intergenic 45.0%
ACATTGGTCGTGCACCTAAC+GGG - chr3.3:77646902-77646921 MS.gene06587:intron 50.0%
ACCATCTTGCCGTCAAGCAA+TGG + chr3.3:77646027-77646046 None:intergenic 50.0%
ACCGCCAACTGTCTCATGTA+TGG - chr3.3:77645833-77645852 MS.gene06587:intron 50.0%
AGTGGATCAACAGTCAGGTG+GGG + chr3.3:77645497-77645516 None:intergenic 50.0%
ATACTGGAAGGCAACAGGGA+AGG - chr3.3:77646822-77646841 MS.gene06587:intron 50.0%
ATGAAAGACGGGATTCTGCG+AGG + chr3.3:77644647-77644666 None:intergenic 50.0%
ATGTCTGCAAATGGGAACCC+TGG - chr3.3:77646175-77646194 MS.gene06587:intron 50.0%
CAATTAGACCTCCTCCCGTT+AGG + chr3.3:77646919-77646938 None:intergenic 50.0%
CAGAGAAGAGGATAAGCAGC+TGG - chr3.3:77647237-77647256 MS.gene06587:CDS 50.0%
CAGTGGATCAACAGTCAGGT+GGG + chr3.3:77645498-77645517 None:intergenic 50.0%
CCATCAAGCTCCTTAAGGGT+GGG + chr3.3:77646961-77646980 None:intergenic 50.0%
CTAACGGGAGGAGGTCTAAT+TGG - chr3.3:77646917-77646936 MS.gene06587:intron 50.0%
CTCTGAATTCGCTTCCGCTA+GGG - chr3.3:77646055-77646074 MS.gene06587:intron 50.0%
CTTGGATACTGGAAGGCAAC+AGG - chr3.3:77646817-77646836 MS.gene06587:intron 50.0%
GGCCAGAAAGGCTTAGATGT+AGG - chr3.3:77644720-77644739 MS.gene06587:CDS 50.0%
GGGCTGCAAAGTTGCTCAAT+CGG - chr3.3:77644405-77644424 MS.gene06587:CDS 50.0%
TCCATCAAGCTCCTTAAGGG+TGG + chr3.3:77646962-77646981 None:intergenic 50.0%
TCCATTGCTTGACGGCAAGA+TGG - chr3.3:77646023-77646042 MS.gene06587:intron 50.0%
TCGCATGCTTAGGGTCTGTT+TGG - chr3.3:77646312-77646331 MS.gene06587:intron 50.0%
TCTATTCCAACCTGCTGGGA+GGG - chr3.3:77645170-77645189 MS.gene06587:intron 50.0%
TCTCTGAATTCGCTTCCGCT+AGG - chr3.3:77646054-77646073 MS.gene06587:intron 50.0%
TGAACCTGTGCTTCCACACT+AGG + chr3.3:77645067-77645086 None:intergenic 50.0%
TGTCTGCAAATGGGAACCCT+GGG - chr3.3:77646176-77646195 MS.gene06587:intron 50.0%
TTCTATTCCAACCTGCTGGG+AGG - chr3.3:77645169-77645188 MS.gene06587:intron 50.0%
! GATTAACGGCAATGGTGACG+AGG - chr3.3:77646131-77646150 MS.gene06587:intron 50.0%
! TAAGCCTAGTGTGGAAGCAC+AGG - chr3.3:77645060-77645079 MS.gene06587:intron 50.0%
AAGCAGCTGGCCATTATCCC+TGG - chr3.3:77647250-77647269 MS.gene06587:CDS 55.0%
ACCTGCTGAGAAGGAGCTAG+AGG - chr3.3:77645299-77645318 MS.gene06587:intron 55.0%
AGAATGGACCTGTCCTGGGT+TGG + chr3.3:77646986-77647005 None:intergenic 55.0%
AGGGTTCCGATTCCGACCTA+CGG - chr3.3:77646074-77646093 MS.gene06587:intron 55.0%
ATATTCGACAGCGCCCCTCA+AGG - chr3.3:77645590-77645609 MS.gene06587:CDS 55.0%
CCAGCAGTGGATCAACAGTC+AGG + chr3.3:77645502-77645521 None:intergenic 55.0%
CCCACCCTTAAGGAGCTTGA+TGG - chr3.3:77646958-77646977 MS.gene06587:intron 55.0%
CCTCATCCGTAGGTCGGAAT+CGG + chr3.3:77646083-77646102 None:intergenic 55.0%
CCTGACTGTTGATCCACTGC+TGG - chr3.3:77645499-77645518 MS.gene06587:CDS 55.0%
CTAGCTCCTTCTCAGCAGGT+TGG + chr3.3:77645299-77645318 None:intergenic 55.0%
GAGCTTGATGGAACCAACCC+AGG - chr3.3:77646970-77646989 MS.gene06587:intron 55.0%
GCAGTGGATCAACAGTCAGG+TGG + chr3.3:77645499-77645518 None:intergenic 55.0%
GGGGTTAAGCATGGCCAGAA+AGG - chr3.3:77644708-77644727 MS.gene06587:CDS 55.0%
TATTCGACAGCGCCCCTCAA+GGG - chr3.3:77645591-77645610 MS.gene06587:CDS 55.0%
TGATGGAACCAACCCAGGAC+AGG - chr3.3:77646975-77646994 MS.gene06587:intron 55.0%
! ACCTCTAGCTCCTTCTCAGC+AGG + chr3.3:77645303-77645322 None:intergenic 55.0%
! CGAGTATCGTCCCACCCTTA+AGG - chr3.3:77646948-77646967 MS.gene06587:intron 55.0%
ATTCCAACCTGCTGGGAGGG+AGG - chr3.3:77645173-77645192 MS.gene06587:intron 60.0%
CCAGCAGCTGTAAAAGGCCC+TGG + chr3.3:77645425-77645444 None:intergenic 60.0%
CCGATTCCGACCTACGGATG+AGG - chr3.3:77646080-77646099 MS.gene06587:intron 60.0%
GGTCGGAATCGGAACCCTAG+CGG + chr3.3:77646072-77646091 None:intergenic 60.0%
TTGGTCGTGCACCTAACGGG+AGG - chr3.3:77646905-77646924 MS.gene06587:intron 60.0%
! CCAGGGCCTTTTACAGCTGC+TGG - chr3.3:77645422-77645441 MS.gene06587:intron 60.0%
! CGGCAATGGTGACGAGGTTC+AGG - chr3.3:77646137-77646156 MS.gene06587:intron 60.0%
GTCGTGCACCTAACGGGAGG+AGG - chr3.3:77646908-77646927 MS.gene06587:intron 65.0%
GCACCTCCCTCCCAGCAGGT+TGG + chr3.3:77645179-77645198 None:intergenic 70.0%
! TGAGGCACCTCCCTCCCAGC+AGG + chr3.3:77645183-77645202 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 77644362 77647291 77644362 ID=MS.gene06587
chr3.3 mRNA 77644362 77647291 77644362 ID=MS.gene06587.t1;Parent=MS.gene06587
chr3.3 exon 77647208 77647291 77647208 ID=MS.gene06587.t1.exon1;Parent=MS.gene06587.t1
chr3.3 CDS 77647208 77647291 77647208 ID=cds.MS.gene06587.t1;Parent=MS.gene06587.t1
chr3.3 exon 77645446 77645611 77645446 ID=MS.gene06587.t1.exon2;Parent=MS.gene06587.t1
chr3.3 CDS 77645446 77645611 77645446 ID=cds.MS.gene06587.t1;Parent=MS.gene06587.t1
chr3.3 exon 77644657 77644934 77644657 ID=MS.gene06587.t1.exon3;Parent=MS.gene06587.t1
chr3.3 CDS 77644657 77644934 77644657 ID=cds.MS.gene06587.t1;Parent=MS.gene06587.t1
chr3.3 exon 77644362 77644559 77644362 ID=MS.gene06587.t1.exon4;Parent=MS.gene06587.t1
chr3.3 CDS 77644362 77644559 77644362 ID=cds.MS.gene06587.t1;Parent=MS.gene06587.t1
Gene Sequence

>MS.gene06587

ATGCATGGTTGTGGAGATGATGCTCATGCTACTATGCTACTTGGGGCTGCAAAGTTGCTCAATCGGCGCAAAAATAAGCTTAAGGTTCTTTTCAAATTCTCTGTTTCTGCTCTTCTTTTATATTATTGTTGTCAATTTTTTGATTATTTTGGTGTTTCTCCAATTAACTAACTATTTGTTTGGTCACCCATAATGAACTAACACAATACGGTGCCTTAGTGTTCATGTTAAATGTTTGACAAAATGGACTGTGAAATAGTTTATACAAATTGACTTCTAACGCCTCGCAGAATCCCGTCTTTCATTTTATAATTCGTCCATGTGTTCCAAATTGGATTTCTGGTTTGGGGTTAAGCATGGCCAGAAAGGCTTAGATGTAGGTATATGTATCTCAGCCCTGCTAGATAACTACTTAACCTTCCACAATCACACTGAATCTGGTGTGAGTTAGTAGATTATCTAGGTTTTGAACTATCTACTACACAACTTTGGGCTACCATGACATGCTAATTACCAAATCATAACTTCACCGGAAGTTAGTAACTTGAACCGCATCCATAATGAAAAGTTTATATAAAGTAGAATGGCATAAAATTCAAAATGTATAAACCAATAGTGTCCCAACTAGATCCAACTTACTAAATGTTCAGCTCTTTGTTCCTTTAGGATAAAATAGCTTAATAAAATATTATAGATTTTAAGCCTAGTGTGGAAGCACAGGTTCAGAAAGATGAAAGTAGATGTTCTATTCTGTTAGTGTGTTTGATGTTCTGATTCCGACCCTTGCATTAAAGGGAACTGTGAGACTTCTATTCCAACCTGCTGGGAGGGAGGTGCCTCACAAGAAAGATGTAGGTAGATGTTCTATTCTGTTAGTGTGTTTGATGCTCTGATTCCGACCCTTTGCATTAAAAAGAACTGTGAGACTTCTTTTCCAACCTGCTGAGAAGGAGCTAGAGGTGCCTCACAAATGATAAAAGAACTTGTTCTTCAAGATGTAGAAGCAATTTTTGCTGTTCATAATGATGCTACGGCATCTACGGGAAACATAGCATCGATTCCAGGGCCTTTTACAGCTGCTGGATGCATTTTTTAGGTAAAAGTTGTCGGCTTAGGTGGTCATGCTGCATTTCCCCACCTGACTGTTGATCCACTGCTGGCTACATCATTTGAAATATTGGTATGCAACAGCTTGTCTCAAGGGAAATTGATCCTCTTCACAGTTAAAATATTCGACAGCGCCCCTCAAGGGAAACCGATACTTTAAAAATATTGACTTTGACAATAAGATCCATCATAACATTTAGTTACAACAAGATCTTTTTAAGGAAAAATATTTACTCCATGATGTCTATAATAATGCTTACTGATTTTTTTTTTTTTGGAAAGAATAATGCTTACTGTTACGAGATGCGGTTTATATGAAATGCTAGATTAGCAAGAGGCAGCAAATAACACTTTACAAATAATAACCGCCAACTGTCTCATGTATGGTTAGCCAAAATTTGATTGGTTAAATATCGTACTTTAATTTGATTGGTTAAATATTCTATTTGATTGGTTAATACTTTTCGGGATGAGATCGATATTCTTTTTTTTATTTTTTTTATTAATATTCAATTTCATTTTATATTATGGATGGTCTTGACTTTTGTGTTTTGTCCATTGCTTGACGGCAAGATGGTGACGTTTTCTCTGAATTCGCTTCCGCTAGGGTTCCGATTCCGACCTACGGATGAGGAACTTATAGATTACTACCTTCGTTCAAAGATTAACGGCAATGGTGACGAGGTTCAGGTTATCCGAGAAATCGATGTCTGCAAATGGGAACCCTGGGATATGCCCAGTATTTCTCTTTTCTTTTTTTACGCACATTATCTCCTCTTGATTTGGTAAAGTTGAAAATCTTATAGTTTTTCTTTGATAAATTCTTAGCTTAATATGCATAGATCGCATGCTTAGGGTCTGTTTGGATTGACATAAGTTTATCCACTTACATAAGCATTTGTGAAATTGTTTGAGGAGCTTATGGAAACAACTTATTACATGTCCACAAGTTGTTTTCAGTCTATTTCTTTAAGCTTTCCATGATAGCTGATGGAAACAACTTATAGCTTAAACTACTGATTTTTATGAAAACAACGACTCTAGTTTTTTTTTGGTTATAGGATTAACTTATACATAAGAACTTATGCCATGAACATTTAATTAAGCTATTTATCCAAACAAGACCTTAGACTGTTTTCGTTGTTTAAGGAATAGATCATGAGGATTTGAGTAACATATAGGAGTGCTGAATTGCTTTTTTATTTTGCTGATTTTTTTTTATCTCTTGGTTTGTGTTGGGTTTGTTGTAGATTTGTCAGTGATAAAAGACGACGACTCAGAGTGGTTCTTCTTCTATCCACAGGATCGGCAATATCCAAATGGGAATCAATTGAACAGAGAAACAAATCTTGGATACTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGGATGAAGAAGACATTAGTTTTCTACATTGGTCGTGCACCTAACGGGAGGAGGTCTAATTGGGTAATGCACGAGTATCGTCCCACCCTTAAGGAGCTTGATGGAACCAACCCAGGACAGGTCCATTCTCTATAATATTCTCTCCTATTTTTATTATGTCAAATCATATGAAGATGATAACAATTACTAATCTGTTAATTTTTTTTTCCTATATCAGAAAGCATATGTGCTATGTCGATTATTTAAGAAAAACGACGAGAGCCTTGAAGTTTCAAACTGTGGTGAAGGGGAGCAGACTAATTCAGCTCCAGAAGAAATACAATCCGATCAAGCTCCCATTACAGTTTCAACATCACAGGTCAGAGAAGAGGATAAGCAGCTGGCCATTATCCCTGGTATCTCAGAGGAAAAGTGA
Protein sequence

>MS.gene06587.t1

MHGCGDDAHATMLLGAAKLLNRRKNKLKMVTFSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVQVIREIDVCKWEPWDMPNLSVIKDDDSEWFFFYPQDRQYPNGNQLNRETNLGYWKATGKDRKIKSGTILIGMKKTLVFYIGRAPNGRRSNWVMHEYRPTLKELDGTNPGQKAYVLCRLFKKNDESLEVSNCGEGEQTNSAPEEIQSDQAPITVSTSQVREEDKQLAIIPGISEEK