AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057459

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057459.t1 MTR_7g013560 93.782 386 24 0 103 488 586 971 0.0 750
MS.gene057459.t1 MTR_7g013560 93.578 109 7 0 1 109 1 109 3.04e-60 213
MS.gene057459.t1 MTR_8g011600 60.156 384 151 2 103 484 410 793 7.53e-134 407
MS.gene057459.t1 MTR_8g011320 52.742 383 175 4 103 484 521 898 2.81e-127 392
MS.gene057459.t1 MTR_8g011320 60.000 110 32 2 1 110 1 98 4.85e-28 118
MS.gene057459.t1 MTR_8g011590 53.786 383 147 3 103 483 476 830 1.61e-119 370
MS.gene057459.t1 MTR_8g037220 54.068 381 167 5 103 483 1368 1740 4.27e-118 381
MS.gene057459.t1 MTR_8g037220 65.686 102 34 1 1 102 780 880 2.73e-36 144
MS.gene057459.t1 MTR_8g011850 55.348 374 160 6 103 476 1642 2008 4.89e-118 382
MS.gene057459.t1 MTR_8g011850 67.647 102 27 2 1 102 1102 1197 5.91e-34 137
MS.gene057459.t1 MTR_8g037220 54.068 381 167 5 103 483 1589 1961 7.31e-118 381
MS.gene057459.t1 MTR_8g037220 65.686 102 34 1 1 102 1001 1101 3.61e-36 143
MS.gene057459.t1 MTR_8g011550 55.352 383 129 7 104 484 589 931 5.34e-117 366
MS.gene057459.t1 MTR_8g011550 77.982 109 24 0 1 109 1 109 1.00e-47 177
MS.gene057459.t1 MTR_8g010440 50.758 396 185 7 91 484 580 967 1.49e-111 352
MS.gene057459.t1 MTR_8g010440 61.194 134 44 2 1 127 1 133 1.32e-41 159
MS.gene057459.t1 MTR_1g030770 53.003 383 168 7 103 485 544 914 1.82e-111 352
MS.gene057459.t1 MTR_1g030770 65.455 110 37 1 1 110 1 109 2.49e-33 134
MS.gene057459.t1 MTR_8g027540 53.388 369 165 5 103 471 591 952 4.07e-111 352
MS.gene057459.t1 MTR_8g027540 77.273 110 23 2 1 109 1 109 1.09e-44 168
MS.gene057459.t1 MTR_6g452490 50.260 384 180 7 103 484 590 964 9.05e-111 350
MS.gene057459.t1 MTR_6g452490 71.845 103 28 1 1 103 1 102 1.58e-39 153
MS.gene057459.t1 MTR_8g011280 51.378 399 186 5 90 486 445 837 1.11e-107 339
MS.gene057459.t1 MTR_7g022290 65.833 240 79 1 252 488 283 522 1.56e-99 309
MS.gene057459.t1 MTR_7g022290 51.316 76 37 0 103 178 200 275 4.02e-15 78.2
MS.gene057459.t1 MTR_8g011180 47.507 381 158 6 103 482 593 932 1.17e-92 301
MS.gene057459.t1 MTR_8g011180 67.890 109 34 1 1 109 1 108 1.31e-38 150
MS.gene057459.t1 MTR_8g011170 45.812 382 144 6 103 484 580 898 1.15e-89 293
MS.gene057459.t1 MTR_8g011170 72.477 109 29 1 1 109 1 108 8.61e-40 154
MS.gene057459.t1 MTR_8g011300 48.579 387 183 12 103 488 589 960 7.61e-87 286
MS.gene057459.t1 MTR_8g011300 75.728 103 24 1 1 103 1 102 5.01e-41 157
MS.gene057459.t1 MTR_0065s0100 40.898 401 148 9 100 483 574 902 5.17e-64 223
MS.gene057459.t1 MTR_0065s0100 83.486 109 18 0 1 109 1 109 4.37e-52 189
MS.gene057459.t1 MTR_2g078070 34.659 352 186 9 160 483 752 1087 2.22e-50 185
MS.gene057459.t1 MTR_2g078070 37.500 176 95 4 1 175 1 162 2.89e-20 95.1
MS.gene057459.t1 MTR_6g016430 35.280 411 230 13 81 486 668 1047 1.45e-48 180
MS.gene057459.t1 MTR_6g016420 39.216 306 165 8 182 486 738 1023 1.53e-48 180
MS.gene057459.t1 MTR_5g028340 26.693 502 235 13 104 487 597 1083 2.45e-38 149
MS.gene057459.t1 MTR_5g028290 30.028 363 182 8 182 486 773 1121 6.42e-37 145
MS.gene057459.t1 MTR_5g028070 29.412 357 187 8 182 486 895 1238 1.17e-35 142
MS.gene057459.t1 MTR_6g016420 33.007 306 146 7 182 486 738 985 2.41e-35 140
MS.gene057459.t1 MTR_5g028420 29.692 357 185 8 182 486 747 1089 2.56e-35 140
MS.gene057459.t1 MTR_5g028750 30.532 357 178 9 182 482 730 1072 2.77e-34 137
MS.gene057459.t1 MTR_8g010430 64.516 93 33 0 389 481 1 93 5.65e-33 121
MS.gene057459.t1 MTR_5g028610 27.974 454 239 13 84 480 650 1072 3.30e-30 125
MS.gene057459.t1 MTR_4g025370 63.953 86 30 1 1 86 1 85 2.29e-28 108
MS.gene057459.t1 MTR_4g025370 63.953 86 30 1 1 86 12 96 1.29e-27 107
MS.gene057459.t1 MTR_3g063360 63.953 86 30 1 1 86 1 85 1.62e-27 106
MS.gene057459.t1 MTR_0133s0020 27.020 396 225 14 142 479 700 1089 1.10e-23 105
MS.gene057459.t1 MTR_7g071940 30.363 303 171 10 182 481 739 1004 1.20e-23 105
MS.gene057459.t1 MTR_4g055630 30.000 340 192 9 158 479 727 1038 3.53e-22 100
MS.gene057459.t1 MTR_3g023320 27.361 413 228 16 142 487 695 1102 5.66e-21 97.1
MS.gene057459.t1 MTR_6g047450 26.065 399 220 13 152 483 710 1100 1.73e-20 95.9
MS.gene057459.t1 MTR_3g086070 23.553 501 247 16 103 487 618 1098 4.23e-20 94.4
MS.gene057459.t1 MTR_5g070960 27.707 314 165 10 182 481 749 1014 7.78e-20 93.6
MS.gene057459.t1 MTR_3g026660 25.474 369 201 10 170 481 726 1077 2.05e-19 92.4
MS.gene057459.t1 MTR_3g026660 25.474 369 201 10 170 481 783 1134 2.78e-19 92.0
MS.gene057459.t1 MTR_4g094540 43.363 113 58 3 371 483 746 852 3.70e-19 91.3
MS.gene057459.t1 MTR_6g046130 27.461 386 230 13 142 481 691 1072 4.84e-19 91.3
MS.gene057459.t1 MTR_6g046620 25.847 472 251 17 100 484 568 1027 6.03e-19 90.9
MS.gene057459.t1 MTR_0256s0050 25.476 420 215 14 142 483 662 1061 1.01e-18 90.1
MS.gene057459.t1 MTR_5g071800 29.014 355 192 13 142 481 700 1009 1.55e-18 89.7
MS.gene057459.t1 MTR_6g052455 25.641 390 219 15 152 483 604 980 6.07e-18 87.8
MS.gene057459.t1 MTR_1g022380 27.829 327 194 12 158 481 719 1006 6.20e-18 87.8
MS.gene057459.t1 MTR_6g046480 26.327 471 243 16 100 479 617 1074 9.47e-18 87.0
MS.gene057459.t1 MTR_5g035280 27.147 361 205 15 170 481 739 1090 3.19e-17 85.5
MS.gene057459.t1 MTR_6g052760 24.684 474 259 14 103 483 623 1091 3.51e-17 85.5
MS.gene057459.t1 MTR_0511s0020 23.629 474 262 16 103 483 605 1071 1.91e-16 83.2
MS.gene057459.t1 MTR_5g035530 27.097 465 246 18 103 481 516 973 2.18e-16 82.8
MS.gene057459.t1 MTR_5g070490 25.290 431 208 13 103 486 623 986 2.60e-16 82.8
MS.gene057459.t1 MTR_7g091140 38.889 108 64 2 1 108 1 106 3.25e-16 82.4
MS.gene057459.t1 MTR_7g091550 37.615 109 67 1 1 109 3 110 4.20e-16 82.0
MS.gene057459.t1 MTR_5g071220 28.247 308 164 10 182 477 747 1009 5.05e-16 81.6
MS.gene057459.t1 MTR_5g071220 28.247 308 164 10 182 477 747 1009 6.49e-16 81.3
MS.gene057459.t1 MTR_5g071670 28.618 304 156 9 182 483 736 980 9.27e-16 80.9
MS.gene057459.t1 MTR_3g021330 25.797 345 192 13 153 483 301 595 1.14e-15 80.1
MS.gene057459.t1 MTR_7g491180 36.697 109 68 1 1 109 1 108 1.41e-15 80.1
MS.gene057459.t1 MTR_7g091190 36.697 109 68 1 1 109 1 108 1.41e-15 80.1
MS.gene057459.t1 MTR_7g091110 34.862 109 70 1 1 109 1 108 1.97e-15 79.7
MS.gene057459.t1 MTR_6g046570 23.326 463 275 13 99 484 619 1078 2.28e-15 79.7
MS.gene057459.t1 MTR_1g023600 27.059 340 180 12 158 481 721 1008 3.06e-15 79.3
MS.gene057459.t1 MTR_5g035200 26.774 310 186 9 182 486 89 362 3.14e-15 77.4
MS.gene057459.t1 MTR_5g037500 27.928 333 207 10 162 481 668 980 3.55e-15 79.0
MS.gene057459.t1 MTR_5g071470 27.273 352 184 10 142 484 700 988 5.90e-15 78.2
MS.gene057459.t1 MTR_4g050790 42.157 102 56 3 8 109 3 101 7.46e-15 77.8
MS.gene057459.t1 MTR_4g126000 26.384 307 172 10 182 479 610 871 8.51e-15 77.8
MS.gene057459.t1 MTR_3g015500 42.157 102 56 3 8 109 41 139 8.77e-15 77.8
MS.gene057459.t1 MTR_6g046760 25.995 377 214 11 159 481 65 430 9.71e-15 76.6
MS.gene057459.t1 MTR_5g072340 24.057 424 241 14 103 483 604 989 1.09e-14 77.4
MS.gene057459.t1 MTR_5g071823 26.364 330 194 13 159 481 723 1010 1.67e-14 77.0
MS.gene057459.t1 MTR_5g071850 26.364 330 194 13 159 481 723 1010 1.67e-14 77.0
MS.gene057459.t1 MTR_1g078490 35.780 109 69 1 1 109 1 108 2.98e-14 75.9
MS.gene057459.t1 MTR_7g091200 34.862 109 70 1 1 109 1 108 3.40e-14 75.9
MS.gene057459.t1 MTR_5g076840 36.697 109 68 1 1 109 1 108 3.45e-14 75.9
MS.gene057459.t1 MTR_7g491190 34.862 109 70 1 1 109 1 108 3.98e-14 75.5
MS.gene057459.t1 MTR_0137s0070 30.068 296 127 16 220 483 377 624 4.22e-14 75.1
MS.gene057459.t1 MTR_6g046550 32.593 135 74 2 367 484 522 656 8.18e-14 74.3
MS.gene057459.t1 MTR_6g046750 25.389 386 220 11 159 487 68 442 1.10e-13 73.6
MS.gene057459.t1 MTR_5g037450 25.325 462 257 19 103 481 641 1097 1.59e-13 73.9
MS.gene057459.t1 MTR_6g046440 24.048 499 232 17 105 483 564 1035 3.01e-13 72.8
MS.gene057459.t1 MTR_0065s0110 54.386 57 26 0 64 120 12 68 3.18e-13 70.9
MS.gene057459.t1 MTR_3g014080 29.195 298 131 15 220 485 959 1208 4.02e-13 72.4
MS.gene057459.t1 MTR_4g119195 40.000 90 53 1 1 90 1 89 4.40e-13 72.4
MS.gene057459.t1 MTR_4g119195 40.000 90 53 1 1 90 1 89 4.72e-13 72.0
MS.gene057459.t1 MTR_5g037590 24.157 356 185 12 163 458 707 1037 7.41e-13 71.6
MS.gene057459.t1 MTR_0133s0030 24.187 492 246 18 103 483 618 1093 7.58e-13 71.6
MS.gene057459.t1 MTR_7g078300 36.697 109 68 1 1 109 1 108 8.38e-13 71.2
MS.gene057459.t1 MTR_7g078640 36.697 109 68 1 1 109 1 108 8.60e-13 71.2
MS.gene057459.t1 MTR_5g071780 26.688 311 171 12 182 481 745 1009 9.80e-13 71.2
MS.gene057459.t1 MTR_3g032340 25.120 418 236 19 99 483 914 1287 1.09e-12 71.2
MS.gene057459.t1 MTR_5g071310 24.337 415 213 13 103 476 593 947 1.24e-12 70.9
MS.gene057459.t1 MTR_6g046750 25.641 351 216 13 159 487 68 395 2.02e-12 69.3
MS.gene057459.t1 MTR_8g445160 37.607 117 68 1 365 481 565 676 2.12e-12 70.1
MS.gene057459.t1 MTR_7g091570 38.542 96 58 1 1 96 1 95 2.30e-12 67.8
MS.gene057459.t1 MTR_6g037690 39.286 84 50 1 1 84 1 83 2.68e-12 68.2
MS.gene057459.t1 MTR_5g070470 27.576 330 169 11 158 481 725 990 2.70e-12 70.1
MS.gene057459.t1 MTR_0534s0010 31.618 136 74 2 365 481 29 164 1.18e-11 63.5
MS.gene057459.t1 MTR_5g040770 25.926 324 209 11 170 481 508 812 1.28e-11 67.8
MS.gene057459.t1 MTR_5g072140 24.619 394 214 13 103 452 586 940 1.79e-11 67.0
MS.gene057459.t1 MTR_5g040900 29.439 214 125 8 277 481 684 880 1.83e-11 67.0
MS.gene057459.t1 MTR_0144s0010 36.170 94 57 1 393 486 317 407 2.04e-11 66.2
MS.gene057459.t1 MTR_2g062350 29.091 110 67 2 1 110 1 99 2.23e-11 62.4
MS.gene057459.t1 MTR_5g035480 24.528 424 225 15 103 478 619 995 3.07e-11 66.6
MS.gene057459.t1 MTR_3g032110 24.940 417 236 19 99 483 911 1282 5.83e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 92 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCAGCCTTTCGTGAATT+TGG 0.094739 7.2:+83809538 MS.gene057459:CDS
CGTGAATTTGGGCGGATTTA+TGG 0.128138 7.2:+83809550 MS.gene057459:CDS
TTATAAAATTGAAGCATTTA+AGG 0.129428 7.2:+83811228 MS.gene057459:intron
CATTGCAGACTGTATAAATT+TGG 0.142430 7.2:+83812219 MS.gene057459:CDS
AATCAGACATTTCAGGAAAT+TGG 0.146514 7.2:+83812073 MS.gene057459:CDS
TGAAGAGATCTTCTTATTAA+AGG 0.157118 7.2:+83812380 MS.gene057459:CDS
AAAATCATGGTGTGCAAAAT+TGG 0.175156 7.2:+83809656 MS.gene057459:CDS
GATTTCTAGGGTCTGTAATT+TGG 0.194495 7.2:-83812272 None:intergenic
CATTTCAGGAAATTGGAATT+TGG 0.219699 7.2:+83812080 MS.gene057459:CDS
CTGCAGCCTTTCGTGAATTT+GGG 0.237772 7.2:+83809539 MS.gene057459:CDS
CAAGCAAACAAGATCGCTTA+TGG 0.247385 7.2:-83811297 None:intergenic
GTTTAAAGAGTCTCTTTATA+TGG 0.254777 7.2:+83811675 MS.gene057459:CDS
AACAAGATCGCTTATGGATT+TGG 0.262154 7.2:-83811291 None:intergenic
ATTTCCTGAAATGTCTGATT+TGG 0.273525 7.2:-83812070 None:intergenic
TCCATACCTTAACAAGATAT+TGG 0.294014 7.2:+83811853 MS.gene057459:CDS
GATCTCTTCAAGATTATGTT+TGG 0.297720 7.2:-83812367 None:intergenic
ATCTAATGGTATTGCCTGAT+TGG 0.322510 7.2:+83812164 MS.gene057459:CDS
TGCTTCCAGTGTCTCCATAT+TGG 0.323645 7.2:-83811888 None:intergenic
GGGGACATCGAATGATTTCT+AGG 0.343357 7.2:-83812285 None:intergenic
TTGGCATTGTTCAGATCTAA+TGG 0.346105 7.2:+83812150 MS.gene057459:CDS
TCACGATATGAGACACAAAA+TGG 0.348147 7.2:+83809741 MS.gene057459:CDS
GCTTCCAAATCAGACATTTC+AGG 0.353253 7.2:+83812066 MS.gene057459:CDS
GGAATTCTATAGTTCCAATA+TGG 0.357303 7.2:+83811874 MS.gene057459:CDS
TCTCACATTCTTCAATTAAG+AGG 0.367115 7.2:-83812306 None:intergenic
ACATCTAGATTTAGAAAATT+CGG 0.371555 7.2:+83811440 MS.gene057459:CDS
GGCAAGACGTGGCATTCCTT+CGG 0.371886 7.2:-83812251 None:intergenic
TCCAATATCTTGTTAAGGTA+TGG 0.381616 7.2:-83811854 None:intergenic
GCAAGACGTGGCATTCCTTC+GGG 0.389239 7.2:-83812250 None:intergenic
CTTGCAAAGACTAATATTGA+AGG 0.398859 7.2:+83811316 MS.gene057459:CDS
ATCTCTTCAAGATTATGTTT+GGG 0.402798 7.2:-83812366 None:intergenic
TTAGAAAGACATGGAGGAAA+GGG 0.429157 7.2:-83811785 None:intergenic
TATACGCTCCCTTCATGAAC+TGG 0.447065 7.2:+83811604 MS.gene057459:CDS
AGAATTCCAATATCTTGTTA+AGG 0.447919 7.2:-83811859 None:intergenic
AGGCTTGCAGCAACACCATA+TGG 0.457871 7.2:-83809037 None:intergenic
ACATGGAGGAAAGGGAGGGA+TGG 0.458130 7.2:-83811777 None:intergenic
GACCCTTGGCAAAGTTTACC+TGG 0.461100 7.2:+83811976 MS.gene057459:CDS
ATCACTCTCTATGATTGTAA+AGG 0.485464 7.2:+83811530 MS.gene057459:CDS
AAAAGTCTTGGAAGAAAAGA+AGG 0.485646 7.2:+83811415 MS.gene057459:CDS
GTATGTGACTGCGAAGGACT+TGG 0.487032 7.2:+83811260 MS.gene057459:CDS
TATTAGTGAAGTAAAAGTCT+TGG 0.489256 7.2:+83811403 MS.gene057459:CDS
TTATGGTGTTATGCATCAGT+TGG 0.492362 7.2:+83809567 MS.gene057459:CDS
CTCACATTCTTCAATTAAGA+GGG 0.493871 7.2:-83812305 None:intergenic
GAAAGACATGGAGGAAAGGG+AGG 0.494868 7.2:-83811782 None:intergenic
ATGGAAATGCAATAAGTTGA+GGG 0.498197 7.2:+83811694 MS.gene057459:CDS
GTTGTTTCTCCTCGGCATCA+AGG 0.507279 7.2:-83809630 None:intergenic
ATCAAGGAGCACAGCTCTGA+TGG 0.507317 7.2:-83809614 None:intergenic
TATGGAAATGCAATAAGTTG+AGG 0.508185 7.2:+83811693 MS.gene057459:CDS
TTTAGAAAATTCGGCATGCG+AGG 0.515423 7.2:+83811449 MS.gene057459:CDS
ATTAGAAAGACATGGAGGAA+AGG 0.516256 7.2:-83811786 None:intergenic
GAGATGTTGAAAATCCAATC+AGG 0.516892 7.2:-83812178 None:intergenic
TTGCTGCAAGCCTCATCGAC+AGG 0.521078 7.2:+83809047 MS.gene057459:CDS
GCAATAAGTTGAGGGGATGG+TGG 0.524995 7.2:+83811702 MS.gene057459:CDS
TTGTTAAGGTATGGAAAACT+AGG 0.529876 7.2:-83811845 None:intergenic
ATGGCTGAGCAAATTCCATA+TGG 0.533986 7.2:+83809022 MS.gene057459:CDS
TCATCTAGCAAGTCATCAGC+AGG 0.535562 7.2:-83809709 None:intergenic
ATGCTAAAAGACTTGACCCT+TGG 0.537681 7.2:+83811962 MS.gene057459:CDS
AGCGTATAGTGAGAGACTTA+AGG 0.546861 7.2:-83811589 None:intergenic
AACAAAAGACATTCCATTGG+TGG 0.551389 7.2:-83811566 None:intergenic
TTAGAAAATTCGGCATGCGA+GGG 0.553576 7.2:+83811450 MS.gene057459:CDS
CAAATTTATACAGTCTGCAA+TGG 0.554487 7.2:-83812218 None:intergenic
GAGAAACAACAACAAAATCA+TGG 0.557278 7.2:+83809643 MS.gene057459:CDS
GTGTTATGCATCAGTTGGAA+AGG 0.557311 7.2:+83809572 MS.gene057459:CDS
TAGTTCCAATATGGAGACAC+TGG 0.566213 7.2:+83811883 MS.gene057459:CDS
AGCTGTGCTCCTTGATGCCG+AGG 0.569347 7.2:+83809621 MS.gene057459:CDS
CAGCCTTTCGTGAATTTGGG+CGG 0.573511 7.2:+83809542 MS.gene057459:CDS
AGGAACAAAAGACATTCCAT+TGG 0.580915 7.2:-83811569 None:intergenic
GTCTGTAATTTGGCAAGACG+TGG 0.582759 7.2:-83812262 None:intergenic
CATCCAGGTAAACTTTGCCA+AGG 0.586375 7.2:-83811979 None:intergenic
AAAGACATGGAGGAAAGGGA+GGG 0.587768 7.2:-83811781 None:intergenic
ATTATTAAATTAGAAAGACA+TGG 0.592538 7.2:-83811794 None:intergenic
ATATGTACTCCAGTTCATGA+AGG 0.594430 7.2:-83811613 None:intergenic
GGGACATCGAATGATTTCTA+GGG 0.594764 7.2:-83812284 None:intergenic
ATAAAGAGACTCTTTAAACA+TGG 0.602861 7.2:-83811671 None:intergenic
TTTGAAGTACCTCCCACCAA+TGG 0.603421 7.2:+83811553 MS.gene057459:CDS
TAAAGAGACTCTTTAAACAT+GGG 0.603821 7.2:-83811670 None:intergenic
GGCATGCGAGGGCGATACAA+TGG 0.604563 7.2:+83811461 MS.gene057459:CDS
TATGTACTCCAGTTCATGAA+GGG 0.605425 7.2:-83811612 None:intergenic
AATGCAATAAGTTGAGGGGA+TGG 0.605978 7.2:+83811699 MS.gene057459:CDS
ACAAAAGACATTCCATTGGT+GGG 0.610830 7.2:-83811565 None:intergenic
AATTTGGATTCGCTGCCCGA+AGG 0.634338 7.2:+83812235 MS.gene057459:CDS
AATCCGCCCAAATTCACGAA+AGG 0.636614 7.2:-83809545 None:intergenic
TGGAAATGCAATAAGTTGAG+GGG 0.645318 7.2:+83811695 MS.gene057459:CDS
TGATAAGAACAAAGTAACAA+AGG 0.647101 7.2:+83809771 MS.gene057459:CDS
AAGTTGTTCACCTGTCGATG+AGG 0.647621 7.2:-83809057 None:intergenic
ATTAAATTAGAAAGACATGG+AGG 0.650646 7.2:-83811791 None:intergenic
ATCCAGGTAAACTTTGCCAA+GGG 0.658514 7.2:-83811978 None:intergenic
TCACATTCTTCAATTAAGAG+GGG 0.668601 7.2:-83812304 None:intergenic
ACTGGAAGCAACATTAAACA+TGG 0.671315 7.2:+83811901 MS.gene057459:CDS
AGACACAAACAAGTGCAACA+TGG 0.671625 7.2:+83812326 MS.gene057459:CDS
AAAGACATTCCATTGGTGGG+AGG 0.708875 7.2:-83811562 None:intergenic
CTTAGCGTATGTGACTGCGA+AGG 0.714399 7.2:+83811254 MS.gene057459:CDS
AATGGTTATATGCTGAAGTG+AGG 0.744016 7.2:-83812200 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+AGG - chr7.2:83809089-83809108 None:intergenic 0.0%
!! ATAATAATAATAATAATAAA+GGG - chr7.2:83809088-83809107 None:intergenic 0.0%
!! ATAATACTTGATAAAATACT+TGG - chr7.2:83809491-83809510 None:intergenic 15.0%
!! ATTATTAAATTAGAAAGACA+TGG - chr7.2:83811797-83811816 None:intergenic 15.0%
!! ATTGATAAATGATGAATAAA+TGG + chr7.2:83809351-83809370 MS.gene057459:intron 15.0%
!!! CCAAAATTTAATTTTTTTCA+GGG - chr7.2:83812134-83812153 None:intergenic 15.0%
!!! TTATAAAATTGAAGCATTTA+AGG + chr7.2:83811228-83811247 MS.gene057459:intron 15.0%
!! ACAAACAAAATTTAATGATG+TGG + chr7.2:83809861-83809880 MS.gene057459:intron 20.0%
!! ACATCTAGATTTAGAAAATT+CGG + chr7.2:83811440-83811459 MS.gene057459:CDS 20.0%
!! TTGAATAACATCATTACATA+CGG + chr7.2:83810492-83810511 MS.gene057459:intron 20.0%
!!! AATTTAATTTTTTTCAGGGA+AGG - chr7.2:83812130-83812149 None:intergenic 20.0%
!!! ATACTGAATTTCATTTTTAC+AGG + chr7.2:83809509-83809528 MS.gene057459:intron 20.0%
!!! ATTTCAACAATATTTTCAAG+TGG - chr7.2:83811512-83811531 None:intergenic 20.0%
!!! CCCTGAAAAAAATTAAATTT+TGG + chr7.2:83812131-83812150 MS.gene057459:CDS 20.0%
!!! GCCAAAATTTAATTTTTTTC+AGG - chr7.2:83812135-83812154 None:intergenic 20.0%
!!! TTTTCTACTATGTTTTCATT+TGG - chr7.2:83809325-83809344 None:intergenic 20.0%
! AATTATACTACTAACTAGTG+TGG + chr7.2:83809403-83809422 MS.gene057459:intron 25.0%
! ACTAGTTAGTAGTATAATTG+AGG - chr7.2:83809402-83809421 None:intergenic 25.0%
! AGAATTCCAATATCTTGTTA+AGG - chr7.2:83811862-83811881 None:intergenic 25.0%
! ATAAAGAGACTCTTTAAACA+TGG - chr7.2:83811674-83811693 None:intergenic 25.0%
! ATCTCTTCAAGATTATGTTT+GGG - chr7.2:83812369-83812388 None:intergenic 25.0%
! ATTAAATTAGAAAGACATGG+AGG - chr7.2:83811794-83811813 None:intergenic 25.0%
! CAAATAACAACAATCATTTC+CGG - chr7.2:83810982-83811001 None:intergenic 25.0%
! CGATATCATGTATTAAATCA+TGG - chr7.2:83810947-83810966 None:intergenic 25.0%
! GTAAAATTGAAGAAAGTGAA+TGG + chr7.2:83810625-83810644 MS.gene057459:intron 25.0%
! GTTTAAAGAGTCTCTTTATA+TGG + chr7.2:83811675-83811694 MS.gene057459:CDS 25.0%
! TAAAGAGACTCTTTAAACAT+GGG - chr7.2:83811673-83811692 None:intergenic 25.0%
! TAGATAAGTCAAGTTAGTTA+AGG - chr7.2:83809468-83809487 None:intergenic 25.0%
! TATCTTGAATGTTCAACTAT+CGG + chr7.2:83810834-83810853 MS.gene057459:intron 25.0%
! TATTAGTGAAGTAAAAGTCT+TGG + chr7.2:83811403-83811422 MS.gene057459:CDS 25.0%
! TCAACAAAATATTCACGAAT+TGG - chr7.2:83810863-83810882 None:intergenic 25.0%
! TCAATTGATATACAATGATG+TGG + chr7.2:83810107-83810126 MS.gene057459:intron 25.0%
! TGAATAAATGGATACATGTA+TGG + chr7.2:83809363-83809382 MS.gene057459:intron 25.0%
! TGAATAACATCATTACATAC+GGG + chr7.2:83810493-83810512 MS.gene057459:intron 25.0%
! TGATAAGAACAAAGTAACAA+AGG + chr7.2:83809771-83809790 MS.gene057459:CDS 25.0%
! TTATTGCTCTATATATCCTA+AGG + chr7.2:83810761-83810780 MS.gene057459:intron 25.0%
! TTGATGTGTGATAATTCTAA+TGG - chr7.2:83809153-83809172 None:intergenic 25.0%
!! CTTCAATTTTACCTTGTAAT+AGG - chr7.2:83810617-83810636 None:intergenic 25.0%
!!! AATGATTGTTGTTATTTGGA+CGG + chr7.2:83810984-83811003 MS.gene057459:intron 25.0%
!!! AATTGATGATGCATTATCAT+TGG + chr7.2:83810233-83810252 MS.gene057459:intron 25.0%
!!! ATGGTGCAATTTTTTCTAAT+TGG + chr7.2:83811480-83811499 MS.gene057459:CDS 25.0%
!!! TAAGAGATACTTGTTAGTTT+TGG + chr7.2:83810293-83810312 MS.gene057459:intron 25.0%
!!! TGAATTTCATTTTTACAGGT+TGG + chr7.2:83809513-83809532 MS.gene057459:intron 25.0%
AAAAATGTTTCAGACGAACA+AGG - chr7.2:83811650-83811669 None:intergenic 30.0%
AAAAGTCTTGGAAGAAAAGA+AGG + chr7.2:83811415-83811434 MS.gene057459:CDS 30.0%
AAAATCATGGTGTGCAAAAT+TGG + chr7.2:83809656-83809675 MS.gene057459:CDS 30.0%
AACCAAACTCTTGAATCAAT+TGG + chr7.2:83810534-83810553 MS.gene057459:intron 30.0%
AATCAAAATGTCTTTGTGGT+TGG + chr7.2:83810045-83810064 MS.gene057459:intron 30.0%
AATCAGACATTTCAGGAAAT+TGG + chr7.2:83812073-83812092 MS.gene057459:CDS 30.0%
AGTCAAACCATTCAAAACAT+AGG - chr7.2:83810451-83810470 None:intergenic 30.0%
ATAAGTCAAGTTAGTTAAGG+TGG - chr7.2:83809465-83809484 None:intergenic 30.0%
ATCACTCTCTATGATTGTAA+AGG + chr7.2:83811530-83811549 MS.gene057459:CDS 30.0%
ATGTTTCGTGACAATTTAAC+AGG + chr7.2:83810270-83810289 MS.gene057459:intron 30.0%
ATTCATACTCTCTGAATTGT+TGG - chr7.2:83811120-83811139 None:intergenic 30.0%
ATTTCCTGAAATGTCTGATT+TGG - chr7.2:83812073-83812092 None:intergenic 30.0%
CAAATTTATACAGTCTGCAA+TGG - chr7.2:83812221-83812240 None:intergenic 30.0%
CATTGCAGACTGTATAAATT+TGG + chr7.2:83812219-83812238 MS.gene057459:CDS 30.0%
CATTTCAGGAAATTGGAATT+TGG + chr7.2:83812080-83812099 MS.gene057459:CDS 30.0%
CTCACATTCTTCAATTAAGA+GGG - chr7.2:83812308-83812327 None:intergenic 30.0%
CTCTATATATCCTAAGGATT+GGG + chr7.2:83810767-83810786 MS.gene057459:intron 30.0%
CTTGCAAAGACTAATATTGA+AGG + chr7.2:83811316-83811335 MS.gene057459:CDS 30.0%
GAATAACATCATTACATACG+GGG + chr7.2:83810494-83810513 MS.gene057459:intron 30.0%
GAATCTAAACTCAAATGTTG+TGG + chr7.2:83809903-83809922 MS.gene057459:intron 30.0%
GAGAAACAACAACAAAATCA+TGG + chr7.2:83809643-83809662 MS.gene057459:CDS 30.0%
GATCTCTTCAAGATTATGTT+TGG - chr7.2:83812370-83812389 None:intergenic 30.0%
GGAATTCTATAGTTCCAATA+TGG + chr7.2:83811874-83811893 MS.gene057459:CDS 30.0%
GGCTATAATGAAGAAAATGT+TGG + chr7.2:83810191-83810210 MS.gene057459:intron 30.0%
GTCAAACCATTCAAAACATA+GGG - chr7.2:83810450-83810469 None:intergenic 30.0%
GTGTTAGAATCAGATATCAT+TGG + chr7.2:83809970-83809989 MS.gene057459:intron 30.0%
TATCACACATCAATCTTGTA+TGG + chr7.2:83809160-83809179 MS.gene057459:intron 30.0%
TATGGAAATGCAATAAGTTG+AGG + chr7.2:83811693-83811712 MS.gene057459:CDS 30.0%
TCAAACCATTCAAAACATAG+GGG - chr7.2:83810449-83810468 None:intergenic 30.0%
TCACATTCTTCAATTAAGAG+GGG - chr7.2:83812307-83812326 None:intergenic 30.0%
TCCAATATCTTGTTAAGGTA+TGG - chr7.2:83811857-83811876 None:intergenic 30.0%
TCCATACCTTAACAAGATAT+TGG + chr7.2:83811853-83811872 MS.gene057459:CDS 30.0%
TCTCACATTCTTCAATTAAG+AGG - chr7.2:83812309-83812328 None:intergenic 30.0%
TGGAAATCAAAATGTCTTTG+TGG + chr7.2:83810041-83810060 MS.gene057459:intron 30.0%
TTAAGAATCATGGAATCGAA+GGG + chr7.2:83809243-83809262 MS.gene057459:intron 30.0%
TTCAACAAACTAACAGTGTA+AGG + chr7.2:83809929-83809948 MS.gene057459:intron 30.0%
TTGTTAAGGTATGGAAAACT+AGG - chr7.2:83811848-83811867 None:intergenic 30.0%
! ATGGAAATGCAATAAGTTGA+GGG + chr7.2:83811694-83811713 MS.gene057459:CDS 30.0%
! ATGTTTTACAAGGTGACTTT+TGG + chr7.2:83810652-83810671 MS.gene057459:intron 30.0%
! CGGAAATGATTGTTGTTATT+TGG + chr7.2:83810980-83810999 MS.gene057459:intron 30.0%
! TGCATCATCAATTTTGTTCT+TGG - chr7.2:83810226-83810245 None:intergenic 30.0%
! TTAAGCATCGTTAAGAATCA+TGG + chr7.2:83809233-83809252 MS.gene057459:intron 30.0%
!!! AAGACATTTTGATTTCCATG+TGG - chr7.2:83810039-83810058 None:intergenic 30.0%
!!! ATTTTGTTGTTGTTTCTCCT+CGG - chr7.2:83809641-83809660 None:intergenic 30.0%
!!! GAACGAGAGTTTTGAAAAAT+GGG + chr7.2:83810326-83810345 MS.gene057459:intron 30.0%
!!! GAATGGATTGATGTTTTACA+AGG + chr7.2:83810642-83810661 MS.gene057459:intron 30.0%
!!! TGTTAGTTTTGGATGACATT+TGG + chr7.2:83810304-83810323 MS.gene057459:intron 30.0%
AAAACAGTGGCACAAACAAT+GGG + chr7.2:83810414-83810433 MS.gene057459:intron 35.0%
AACAAAAGACATTCCATTGG+TGG - chr7.2:83811569-83811588 None:intergenic 35.0%
AACAAACTAACAGTGTAAGG+AGG + chr7.2:83809932-83809951 MS.gene057459:intron 35.0%
AACAAGATCGCTTATGGATT+TGG - chr7.2:83811294-83811313 None:intergenic 35.0%
AAGTGCAAAACTCGTTTGAA+AGG + chr7.2:83810130-83810149 MS.gene057459:intron 35.0%
AATGGTTATATGCTGAAGTG+AGG - chr7.2:83812203-83812222 None:intergenic 35.0%
ACAAAAGACATTCCATTGGT+GGG - chr7.2:83811568-83811587 None:intergenic 35.0%
ACAAACTAACAGTGTAAGGA+GGG + chr7.2:83809933-83809952 MS.gene057459:intron 35.0%
ACTAGCAATAAGAACACTAG+GGG + chr7.2:83810590-83810609 MS.gene057459:intron 35.0%
ACTGGAAGCAACATTAAACA+TGG + chr7.2:83811901-83811920 MS.gene057459:CDS 35.0%
ACTTTGCAACATTACATGCA+CGG - chr7.2:83811036-83811055 None:intergenic 35.0%
AGCAAATCTGTTTGGAGATA+AGG - chr7.2:83809806-83809825 None:intergenic 35.0%
AGCCTTGAGTTCAAAGTTAT+CGG - chr7.2:83810175-83810194 None:intergenic 35.0%
AGGAACAAAAGACATTCCAT+TGG - chr7.2:83811572-83811591 None:intergenic 35.0%
ATATGTACTCCAGTTCATGA+AGG - chr7.2:83811616-83811635 None:intergenic 35.0%
ATCTAATGGTATTGCCTGAT+TGG + chr7.2:83812164-83812183 MS.gene057459:CDS 35.0%
ATGTGGTGAATGATATGTCT+GGG + chr7.2:83809878-83809897 MS.gene057459:intron 35.0%
ATTAGAAAGACATGGAGGAA+AGG - chr7.2:83811789-83811808 None:intergenic 35.0%
CACTAGCAATAAGAACACTA+GGG + chr7.2:83810589-83810608 MS.gene057459:intron 35.0%
GAAAAAGCTCCCGAAAAATT+GGG + chr7.2:83812003-83812022 MS.gene057459:CDS 35.0%
GAGATGTTGAAAATCCAATC+AGG - chr7.2:83812181-83812200 None:intergenic 35.0%
GATGCTATATATGATGTGCA+TGG + chr7.2:83810900-83810919 MS.gene057459:intron 35.0%
GCTCTATATATCCTAAGGAT+TGG + chr7.2:83810766-83810785 MS.gene057459:intron 35.0%
GTTAAGAATCATGGAATCGA+AGG + chr7.2:83809242-83809261 MS.gene057459:intron 35.0%
TAAAACAGTGGCACAAACAA+TGG + chr7.2:83810413-83810432 MS.gene057459:intron 35.0%
TAAGGATTGGGATATAGAGA+AGG + chr7.2:83810779-83810798 MS.gene057459:intron 35.0%
TATGTACTCCAGTTCATGAA+GGG - chr7.2:83811615-83811634 None:intergenic 35.0%
TCACGATATGAGACACAAAA+TGG + chr7.2:83809741-83809760 MS.gene057459:CDS 35.0%
TCTAAACTCAAATGTTGTGG+TGG + chr7.2:83809906-83809925 MS.gene057459:intron 35.0%
TGAAAAAGCTCCCGAAAAAT+TGG + chr7.2:83812002-83812021 MS.gene057459:CDS 35.0%
TTAGAAAGACATGGAGGAAA+GGG - chr7.2:83811788-83811807 None:intergenic 35.0%
TTAGTTAAGGTGGTTAGAGT+TGG - chr7.2:83809455-83809474 None:intergenic 35.0%
TTCTCTATATCCCAATCCTT+AGG - chr7.2:83810780-83810799 None:intergenic 35.0%
TTGAAGACTTTCTTGATGTG+CGG + chr7.2:83810354-83810373 MS.gene057459:intron 35.0%
TTGGCATTGTTCAGATCTAA+TGG + chr7.2:83812150-83812169 MS.gene057459:CDS 35.0%
! AAGTCTTTTAGCATGGAAAG+AGG - chr7.2:83811956-83811975 None:intergenic 35.0%
! AGATTTCGCACCCAATTTTT+CGG - chr7.2:83812016-83812035 None:intergenic 35.0%
! TCTTTGTGGTTGGTATTGTT+GGG + chr7.2:83810055-83810074 MS.gene057459:intron 35.0%
! TGCCAATTGATTCAAGAGTT+TGG - chr7.2:83810539-83810558 None:intergenic 35.0%
! TGGAAATGCAATAAGTTGAG+GGG + chr7.2:83811695-83811714 MS.gene057459:CDS 35.0%
! TTCAGAGAGTATGAATGAGA+AGG + chr7.2:83811124-83811143 MS.gene057459:intron 35.0%
!! AAGAGTTTGGTTCACTCTTT+TGG - chr7.2:83810526-83810545 None:intergenic 35.0%
!! AGGATGAGTTGATTCAATTG+TGG + chr7.2:83810799-83810818 MS.gene057459:intron 35.0%
!! ATTGACCCCTATGTTTTGAA+TGG + chr7.2:83810441-83810460 MS.gene057459:intron 35.0%
!! ATTTGCTTTTCGCCGTAAAA+TGG + chr7.2:83809819-83809838 MS.gene057459:intron 35.0%
!! CAATCTCATGAGCCATTTTA+CGG - chr7.2:83809834-83809853 None:intergenic 35.0%
!! GATTTCTAGGGTCTGTAATT+TGG - chr7.2:83812275-83812294 None:intergenic 35.0%
!! TGAGTTGATTCAATTGTGGA+TGG + chr7.2:83810803-83810822 MS.gene057459:intron 35.0%
!! TTATGGTGTTATGCATCAGT+TGG + chr7.2:83809567-83809586 MS.gene057459:CDS 35.0%
!! TTTGTGCCACTGTTTTACTA+CGG - chr7.2:83810410-83810429 None:intergenic 35.0%
!!! GGAACGAGAGTTTTGAAAAA+TGG + chr7.2:83810325-83810344 MS.gene057459:intron 35.0%
AACAAACGCCAAGATTCTTC+TGG - chr7.2:83810474-83810493 None:intergenic 40.0%
AGACACAAACAAGTGCAACA+TGG + chr7.2:83812326-83812345 MS.gene057459:CDS 40.0%
AGCGTATAGTGAGAGACTTA+AGG - chr7.2:83811592-83811611 None:intergenic 40.0%
ATCCAGGTAAACTTTGCCAA+GGG - chr7.2:83811981-83812000 None:intergenic 40.0%
ATGCTAAAAGACTTGACCCT+TGG + chr7.2:83811962-83811981 MS.gene057459:CDS 40.0%
ATGGCTGAGCAAATTCCATA+TGG + chr7.2:83809022-83809041 MS.gene057459:CDS 40.0%
ATGTTGCAAAGTGAGGCTAT+TGG + chr7.2:83811044-83811063 MS.gene057459:intron 40.0%
ATTCAATTGTGGATGGCACA+TGG + chr7.2:83810810-83810829 MS.gene057459:intron 40.0%
CAAGCAAACAAGATCGCTTA+TGG - chr7.2:83811300-83811319 None:intergenic 40.0%
CCACTAGCAATAAGAACACT+AGG + chr7.2:83810588-83810607 MS.gene057459:intron 40.0%
CCTAGTGTTCTTATTGCTAG+TGG - chr7.2:83810591-83810610 None:intergenic 40.0%
CTAGCAATAAGAACACTAGG+GGG + chr7.2:83810591-83810610 MS.gene057459:intron 40.0%
CTCCGATAACTTTGAACTCA+AGG + chr7.2:83810170-83810189 MS.gene057459:intron 40.0%
CTTTGCAACATTACATGCAC+GGG - chr7.2:83811035-83811054 None:intergenic 40.0%
GATATCGCAATGCAAGTATC+CGG + chr7.2:83810960-83810979 MS.gene057459:intron 40.0%
GATGTGGTGAATGATATGTC+TGG + chr7.2:83809877-83809896 MS.gene057459:intron 40.0%
GCATGTAATGTTGCAAAGTG+AGG + chr7.2:83811037-83811056 MS.gene057459:intron 40.0%
GCTTCCAAATCAGACATTTC+AGG + chr7.2:83812066-83812085 MS.gene057459:CDS 40.0%
GGGACATCGAATGATTTCTA+GGG - chr7.2:83812287-83812306 None:intergenic 40.0%
GGTGGCACAAAAAGATTTGT+CGG + chr7.2:83811005-83811024 MS.gene057459:intron 40.0%
GTGAGAGAGTTAGAGTTAGT+TGG - chr7.2:83809433-83809452 None:intergenic 40.0%
GTGTTATGCATCAGTTGGAA+AGG + chr7.2:83809572-83809591 MS.gene057459:CDS 40.0%
GTTTGACTCCAGAAGAATCT+TGG + chr7.2:83810463-83810482 MS.gene057459:intron 40.0%
TAGTTCCAATATGGAGACAC+TGG + chr7.2:83811883-83811902 MS.gene057459:CDS 40.0%
TGGTAACTCAGTTTCAACAC+TGG - chr7.2:83810708-83810727 None:intergenic 40.0%
TTAGAAAATTCGGCATGCGA+GGG + chr7.2:83811450-83811469 MS.gene057459:CDS 40.0%
TTTAGAAAATTCGGCATGCG+AGG + chr7.2:83811449-83811468 MS.gene057459:CDS 40.0%
! AAGATAGCAGAAAAGTGCAC+CGG + chr7.2:83810561-83810580 MS.gene057459:intron 40.0%
! AAGGGTCAAGTCTTTTAGCA+TGG - chr7.2:83811963-83811982 None:intergenic 40.0%
! AATGCAATAAGTTGAGGGGA+TGG + chr7.2:83811699-83811718 MS.gene057459:CDS 40.0%
! ACTCGTTTGAAAGGAGTATG+TGG + chr7.2:83810139-83810158 MS.gene057459:intron 40.0%
! ATTGTTGGGATTGGTGGTTT+AGG + chr7.2:83810069-83810088 MS.gene057459:intron 40.0%
! CTCGTTTGAAAGGAGTATGT+GGG + chr7.2:83810140-83810159 MS.gene057459:intron 40.0%
! GATTTCGCACCCAATTTTTC+GGG - chr7.2:83812015-83812034 None:intergenic 40.0%
! GTCTTTGTGGTTGGTATTGT+TGG + chr7.2:83810054-83810073 MS.gene057459:intron 40.0%
! TCTTTTAGCATGGAAAGAGG+AGG - chr7.2:83811953-83811972 None:intergenic 40.0%
!! GATTGTTGTTATTTGGACGG+TGG + chr7.2:83810987-83811006 MS.gene057459:intron 40.0%
!! TTGTGCCACTGTTTTACTAC+GGG - chr7.2:83810409-83810428 None:intergenic 40.0%
AAAGACATGGAGGAAAGGGA+GGG - chr7.2:83811784-83811803 None:intergenic 45.0%
AAAGACATTCCATTGGTGGG+AGG - chr7.2:83811565-83811584 None:intergenic 45.0%
AAGTTGTTCACCTGTCGATG+AGG - chr7.2:83809060-83809079 None:intergenic 45.0%
AATCCGCCCAAATTCACGAA+AGG - chr7.2:83809548-83809567 None:intergenic 45.0%
CATCCAGGTAAACTTTGCCA+AGG - chr7.2:83811982-83812001 None:intergenic 45.0%
CGGCGAAAAGCAAATCTGTT+TGG - chr7.2:83809814-83809833 None:intergenic 45.0%
CTGCAGCCTTTCGTGAATTT+GGG + chr7.2:83809539-83809558 MS.gene057459:CDS 45.0%
GACAACCCGTAGTAAAACAG+TGG + chr7.2:83810401-83810420 MS.gene057459:intron 45.0%
GCAAAACATTGTCGCAGTTG+AGG - chr7.2:83810741-83810760 None:intergenic 45.0%
GGGGACATCGAATGATTTCT+AGG - chr7.2:83812288-83812307 None:intergenic 45.0%
GTCTGTAATTTGGCAAGACG+TGG - chr7.2:83812265-83812284 None:intergenic 45.0%
GTTGGTATTGTTGGGATTGG+TGG + chr7.2:83810063-83810082 MS.gene057459:intron 45.0%
TATACGCTCCCTTCATGAAC+TGG + chr7.2:83811604-83811623 MS.gene057459:CDS 45.0%
TCATCTAGCAAGTCATCAGC+AGG - chr7.2:83809712-83809731 None:intergenic 45.0%
TCTGCAGCCTTTCGTGAATT+TGG + chr7.2:83809538-83809557 MS.gene057459:CDS 45.0%
TCTTATTGCTAGTGGAACCC+CGG - chr7.2:83810583-83810602 None:intergenic 45.0%
TGCTTCCAGTGTCTCCATAT+TGG - chr7.2:83811891-83811910 None:intergenic 45.0%
! AGATAGCAGAAAAGTGCACC+GGG + chr7.2:83810562-83810581 MS.gene057459:intron 45.0%
! CGTGAATTTGGGCGGATTTA+TGG + chr7.2:83809550-83809569 MS.gene057459:CDS 45.0%
! GTGGTTGGTATTGTTGGGAT+TGG + chr7.2:83810060-83810079 MS.gene057459:intron 45.0%
! TTTGAAGTACCTCCCACCAA+TGG + chr7.2:83811553-83811572 MS.gene057459:CDS 45.0%
!! AGCTTGTTGATGCAACCACA+TGG + chr7.2:83810021-83810040 MS.gene057459:intron 45.0%
AATTTGGATTCGCTGCCCGA+AGG + chr7.2:83812235-83812254 MS.gene057459:CDS 50.0%
ACACTAGGGGGCCTATTACA+AGG + chr7.2:83810603-83810622 MS.gene057459:intron 50.0%
AGGCTTGCAGCAACACCATA+TGG - chr7.2:83809040-83809059 None:intergenic 50.0%
CAGCCTTTCGTGAATTTGGG+CGG + chr7.2:83809542-83809561 MS.gene057459:CDS 50.0%
CTTAGCGTATGTGACTGCGA+AGG + chr7.2:83811254-83811273 MS.gene057459:CDS 50.0%
GAAAGACATGGAGGAAAGGG+AGG - chr7.2:83811785-83811804 None:intergenic 50.0%
GACCCTTGGCAAAGTTTACC+TGG + chr7.2:83811976-83811995 MS.gene057459:CDS 50.0%
GTATGTGACTGCGAAGGACT+TGG + chr7.2:83811260-83811279 MS.gene057459:CDS 50.0%
TTCTTGATGTGCGGTGCACA+AGG + chr7.2:83810363-83810382 MS.gene057459:intron 50.0%
! ATCAAGGAGCACAGCTCTGA+TGG - chr7.2:83809617-83809636 None:intergenic 50.0%
! GATAGCAGAAAAGTGCACCG+GGG + chr7.2:83810563-83810582 MS.gene057459:intron 50.0%
! GCAATAAGTTGAGGGGATGG+TGG + chr7.2:83811702-83811721 MS.gene057459:CDS 50.0%
!! GCAGTTGAGGCGTCAAGTTT+TGG - chr7.2:83810728-83810747 None:intergenic 50.0%
!! GTTGTTTCTCCTCGGCATCA+AGG - chr7.2:83809633-83809652 None:intergenic 50.0%
!!! TCGGGAGCTTTTTCACATCC+AGG - chr7.2:83811997-83812016 None:intergenic 50.0%
ACATGGAGGAAAGGGAGGGA+TGG - chr7.2:83811780-83811799 None:intergenic 55.0%
GCAAGACGTGGCATTCCTTC+GGG - chr7.2:83812253-83812272 None:intergenic 55.0%
GGCAAGACGTGGCATTCCTT+CGG - chr7.2:83812254-83812273 None:intergenic 55.0%
TTGCTGCAAGCCTCATCGAC+AGG + chr7.2:83809047-83809066 MS.gene057459:CDS 55.0%
AGCTGTGCTCCTTGATGCCG+AGG + chr7.2:83809621-83809640 MS.gene057459:CDS 60.0%
GGCATGCGAGGGCGATACAA+TGG + chr7.2:83811461-83811480 MS.gene057459:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 83809022 83812399 83809022 ID=MS.gene057459
chr7.2 mRNA 83809022 83812399 83809022 ID=MS.gene057459.t1;Parent=MS.gene057459
chr7.2 exon 83809022 83809068 83809022 ID=MS.gene057459.t1.exon1;Parent=MS.gene057459.t1
chr7.2 CDS 83809022 83809068 83809022 ID=cds.MS.gene057459.t1;Parent=MS.gene057459.t1
chr7.2 exon 83809531 83809792 83809531 ID=MS.gene057459.t1.exon2;Parent=MS.gene057459.t1
chr7.2 CDS 83809531 83809792 83809531 ID=cds.MS.gene057459.t1;Parent=MS.gene057459.t1
chr7.2 exon 83811242 83812399 83811242 ID=MS.gene057459.t1.exon3;Parent=MS.gene057459.t1
chr7.2 CDS 83811242 83812399 83811242 ID=cds.MS.gene057459.t1;Parent=MS.gene057459.t1
Gene Sequence

>MS.gene057459

ATGGCTGAGCAAATTCCATATGGTGTTGCTGCAAGCCTCATCGACAGGTGAACAACTTCTCAACCCTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCATTATTTCTAATTTCCATTAGAATTATCACACATCAATCTTGTATGGTCATTTTGTCTATTTCAATTCTTACAAAAAAAAATAAAAATTGAAAGCAGTTAAGCATCGTTAAGAATCATGGAATCGAAGGGAGAAAGATCATAGATGTAAGCAAGATAGCAAGCATAGTTGTATTCATGAGAAAAGTCCAAATGAAAACATAGTAGAAAATAATAGATTGATAAATGATGAATAAATGGATACATGTATGGTCTTATTTATAGACCTCAATTATACTACTAACTAGTGTGGTTAACCAACTAACTCTAACTCTCTCACCAACTCTAACCACCTTAACTAACTTGACTTATCTACCAAGTATTTTATCAAGTATTATACTGAATTTCATTTTTACAGGTTGGCTTCTGCAGCCTTTCGTGAATTTGGGCGGATTTATGGTGTTATGCATCAGTTGGAAAGGCTTAAGACTACAATTCAATCCATCAGAGCTGTGCTCCTTGATGCCGAGGAGAAACAACAACAAAATCATGGTGTGCAAAATTGGATAAGAAGACTCAAAGATGATGTGCTTCATCCTGCTGATGACTTGCTAGATGAATTTGTTATTCACGATATGAGACACAAAATGGATGAAGCTGATAAGAACAAAGTAACAAAGGTACTTCATTCCTTATCTCCAAACAGATTTGCTTTTCGCCGTAAAATGGCTCATGAGATTGAAAAACTACAAACAAAATTTAATGATGTGGTGAATGATATGTCTGGGTTGAATCTAAACTCAAATGTTGTGGTGGTTCAACAAACTAACAGTGTAAGGAGGGAAACAAGTTCATTTGTGTTAGAATCAGATATCATTGGAAGAGAAGATGATAAAAACAAGATTATAAGCTTGTTGATGCAACCACATGGAAATCAAAATGTCTTTGTGGTTGGTATTGTTGGGATTGGTGGTTTAGGAAAGACAACTCTTGCTCAATTGATATACAATGATGTGGAAGTGCAAAACTCGTTTGAAAGGAGTATGTGGGTATGTGTCTCCGATAACTTTGAACTCAAGGCTATAATGAAGAAAATGTTGGAGTCATTAACCAAGAACAAAATTGATGATGCATTATCATTGGACAATATGCAAAATATGTTTCGTGACAATTTAACAGGTAAGAGATACTTGTTAGTTTTGGATGACATTTGGAACGAGAGTTTTGAAAAATGGGCTCACTTGAAGACTTTCTTGATGTGCGGTGCACAAGGTAGTAAGATTGTAGCGACAACCCGTAGTAAAACAGTGGCACAAACAATGGGTGTAATTGACCCCTATGTTTTGAATGGTTTGACTCCAGAAGAATCTTGGCGTTTGTTGAATAACATCATTACATACGGGGATGAGTCCAAAAGAGTGAACCAAACTCTTGAATCAATTGGCAAGAAGATAGCAGAAAAGTGCACCGGGGTTCCACTAGCAATAAGAACACTAGGGGGCCTATTACAAGGTAAAATTGAAGAAAGTGAATGGATTGATGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGATGAAGAAAGTATCATGCCAGTGTTGAAACTGAGTTACCAAAACTTGACGCCTCAACTGCGACAATGTTTTGCTTATTGCTCTATATATCCTAAGGATTGGGATATAGAGAAGGATGAGTTGATTCAATTGTGGATGGCACATGGTTATCTTGAATGTTCAACTATCGGTAACCAATTCGTGAATATTTTGTTGATGAAGTCATTTTTTCAAGATGCTATATATGATGTGCATGGTGATATAAATAGTTTCAAAATCCATGATTTAATACATGATATCGCAATGCAAGTATCCGGAAATGATTGTTGTTATTTGGACGGTGGCACAAAAAGATTTGTCGGAAGTCCCGTGCATGTAATGTTGCAAAGTGAGGCTATTGGTTTGTTGAAGTCATTGAATGCAAGAAAGATGCGAACTTTGATTTTGTTGTCCAACAATTCAGAGAGTATGAATGAGAAGGAATTGTTTGTTATATCAAAATTCAAATACTTACGTGTATTGAAGCTTTCACATTGTTCTTTGAGTAAGTTGTGTAATTCATTTATAAAATTGAAGCATTTAAGGTATCTTAGCGTATGTGACTGCGAAGGACTTGGAAGTCTCTCCAAATCCATAAGCGATCTTGTTTGCTTGCAAAGACTAATATTGAAGGCATGTAAAAAAGTTGAAATTTCTACAAAAGATCTCTCAAAGTTAATCAATTTGAAGCATCTTGATATTAGTGAAGTAAAAGTCTTGGAAGAAAAGAAGGCAACATCTAGATTTAGAAAATTCGGCATGCGAGGGCGATACAATGGTGCAATTTTTTCTAATTGGATTTCTCCACTTGAAAATATTGTTGAAATCACTCTCTATGATTGTAAAGGTTTGAAGTACCTCCCACCAATGGAATGTCTTTTGTTCCTTAAGTCTCTCACTATACGCTCCCTTCATGAACTGGAGTACATATATTATGACGAGCCTTGTTCGTCTGAAACATTTTTCCCATGTTTAAAGAGTCTCTTTATATGGAAATGCAATAAGTTGAGGGGATGGTGGAAGATGAGTGATGATGTCAATGATGATAACTCTTCGCATTCAAAAAATCTCTCCATCCCTCCCTTTCCTCCATGTCTTTCTAATTTAATAATCATTAAATGTCGAATGTTGACTCGCATGCCTAGTTTTCCATACCTTAACAAGATATTGGAATTCTATAGTTCCAATATGGAGACACTGGAAGCAACATTAAACATGGTAACTTCAAAATGTTCGATTGAATTTCCTCCTCTTTCCATGCTAAAAGACTTGACCCTTGGCAAAGTTTACCTGGATGTGAAAAAGCTCCCGAAAAATTGGGTGCGAAATCTTTCTTCTCTTGAGAATCTTAGTTTTATGAAGCTTCCAAATCAGACATTTCAGGAAATTGGAATTTGGTTTAACGAAGAGCTCAACTATCTTCCTTCCCTGAAAAAAATTAAATTTTGGCATTGTTCAGATCTAATGGTATTGCCTGATTGGATTTTCAACATCTCCTCACTTCAGCATATAACCATTGCAGACTGTATAAATTTGGATTCGCTGCCCGAAGGAATGCCACGTCTTGCCAAATTACAGACCCTAGAAATCATTCGATGTCCCCTCTTAATTGAAGAATGTGAGACACAAACAAGTGCAACATGGCACAAAATTTCTCACATCCCAAACATAATCTTGAAGAGATCTTCTTATTAA
Protein sequence

>MS.gene057459.t1

MAEQIPYGVAASLIDRLASAAFREFGRIYGVMHQLERLKTTIQSIRAVLLDAEEKQQQNHGVQNWIRRLKDDVLHPADDLLDEFVIHDMRHKMDEADKNKVTKHLRYLSVCDCEGLGSLSKSISDLVCLQRLILKACKKVEISTKDLSKLINLKHLDISEVKVLEEKKATSRFRKFGMRGRYNGAIFSNWISPLENIVEITLYDCKGLKYLPPMECLLFLKSLTIRSLHELEYIYYDEPCSSETFFPCLKSLFIWKCNKLRGWWKMSDDVNDDNSSHSKNLSIPPFPPCLSNLIIIKCRMLTRMPSFPYLNKILEFYSSNMETLEATLNMVTSKCSIEFPPLSMLKDLTLGKVYLDVKKLPKNWVRNLSSLENLSFMKLPNQTFQEIGIWFNEELNYLPSLKKIKFWHCSDLMVLPDWIFNISSLQHITIADCINLDSLPEGMPRLAKLQTLEIIRCPLLIEECETQTSATWHKISHIPNIILKRSSY