Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057566.t1 | AES77518.1 | 89.4 | 616 | 53 | 1 | 1 | 616 | 1 | 604 | 8.90E-306 | 1058.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057566.t1 | P09189 | 65.3 | 617 | 209 | 4 | 1 | 614 | 1 | 615 | 2.8e-223 | 776.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057566.t1 | G7L328 | 89.4 | 616 | 53 | 1 | 1 | 616 | 1 | 604 | 6.4e-306 | 1058.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057566 | MS.gene49538 | 0.837546 | 4.88E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057566.t1 | MTR_7g011590 | 89.448 | 616 | 53 | 1 | 1 | 616 | 1 | 604 | 0.0 | 1102 |
| MS.gene057566.t1 | MTR_5g066800 | 79.618 | 628 | 116 | 2 | 1 | 616 | 1 | 628 | 0.0 | 1031 |
| MS.gene057566.t1 | MTR_7g026110 | 79.870 | 616 | 123 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1018 |
| MS.gene057566.t1 | MTR_7g021440 | 77.325 | 613 | 138 | 1 | 1 | 612 | 1 | 613 | 0.0 | 992 |
| MS.gene057566.t1 | MTR_8g103930 | 78.254 | 630 | 107 | 5 | 1 | 616 | 1 | 614 | 0.0 | 986 |
| MS.gene057566.t1 | MTR_2g038260 | 76.861 | 618 | 139 | 4 | 1 | 615 | 1 | 617 | 0.0 | 976 |
| MS.gene057566.t1 | MTR_2g032550 | 74.313 | 619 | 155 | 4 | 1 | 615 | 1 | 619 | 0.0 | 952 |
| MS.gene057566.t1 | MTR_7g025770 | 73.744 | 617 | 160 | 2 | 1 | 615 | 1 | 617 | 0.0 | 944 |
| MS.gene057566.t1 | MTR_4g079590 | 74.632 | 611 | 153 | 2 | 1 | 609 | 1 | 611 | 0.0 | 943 |
| MS.gene057566.t1 | MTR_7g451380 | 72.816 | 618 | 165 | 2 | 1 | 615 | 1 | 618 | 0.0 | 936 |
| MS.gene057566.t1 | MTR_7g029415 | 73.984 | 615 | 155 | 4 | 3 | 615 | 12 | 623 | 0.0 | 926 |
| MS.gene057566.t1 | MTR_7g026170 | 73.582 | 617 | 161 | 2 | 1 | 615 | 1 | 617 | 0.0 | 926 |
| MS.gene057566.t1 | MTR_7g026140 | 71.935 | 620 | 153 | 6 | 1 | 616 | 1 | 603 | 0.0 | 906 |
| MS.gene057566.t1 | MTR_2g038270 | 69.537 | 627 | 180 | 4 | 1 | 616 | 1 | 627 | 0.0 | 894 |
| MS.gene057566.t1 | MTR_7g026130 | 72.006 | 618 | 166 | 3 | 1 | 612 | 1 | 617 | 0.0 | 893 |
| MS.gene057566.t1 | MTR_7g026130 | 58.333 | 84 | 32 | 1 | 532 | 612 | 620 | 703 | 1.32e-18 | 90.5 |
| MS.gene057566.t1 | MTR_2g022050 | 71.890 | 619 | 171 | 3 | 1 | 616 | 1 | 619 | 0.0 | 890 |
| MS.gene057566.t1 | MTR_7g074460 | 71.220 | 615 | 158 | 2 | 1 | 614 | 1 | 597 | 0.0 | 888 |
| MS.gene057566.t1 | MTR_4g027145 | 69.475 | 629 | 178 | 4 | 1 | 615 | 1 | 629 | 0.0 | 879 |
| MS.gene057566.t1 | MTR_1g017130 | 70.328 | 610 | 141 | 3 | 1 | 609 | 1 | 571 | 0.0 | 868 |
| MS.gene057566.t1 | MTR_2g437440 | 68.821 | 619 | 172 | 4 | 1 | 616 | 1 | 601 | 0.0 | 864 |
| MS.gene057566.t1 | MTR_7g025720 | 66.775 | 614 | 204 | 0 | 1 | 614 | 1 | 614 | 0.0 | 858 |
| MS.gene057566.t1 | MTR_8g032650 | 66.450 | 614 | 206 | 0 | 1 | 614 | 1 | 614 | 0.0 | 857 |
| MS.gene057566.t1 | MTR_7g025760 | 65.203 | 615 | 213 | 1 | 1 | 614 | 1 | 615 | 0.0 | 853 |
| MS.gene057566.t1 | MTR_7g007000 | 68.760 | 621 | 145 | 6 | 1 | 616 | 1 | 577 | 0.0 | 853 |
| MS.gene057566.t1 | MTR_7g025620 | 65.846 | 609 | 208 | 0 | 1 | 609 | 1 | 609 | 0.0 | 843 |
| MS.gene057566.t1 | MTR_7g024030 | 66.942 | 605 | 200 | 0 | 1 | 605 | 1 | 605 | 0.0 | 842 |
| MS.gene057566.t1 | MTR_7g026090 | 66.721 | 613 | 201 | 2 | 1 | 612 | 1 | 611 | 0.0 | 839 |
| MS.gene057566.t1 | MTR_2g032580 | 67.419 | 620 | 166 | 6 | 1 | 616 | 1 | 588 | 0.0 | 838 |
| MS.gene057566.t1 | MTR_7g026030 | 64.658 | 614 | 217 | 0 | 1 | 614 | 1 | 614 | 0.0 | 837 |
| MS.gene057566.t1 | MTR_7g025820 | 67.508 | 594 | 192 | 1 | 1 | 593 | 1 | 594 | 0.0 | 835 |
| MS.gene057566.t1 | MTR_7g025790 | 65.635 | 614 | 211 | 0 | 1 | 614 | 1 | 614 | 0.0 | 833 |
| MS.gene057566.t1 | MTR_7g035155 | 68.233 | 617 | 140 | 5 | 1 | 615 | 1 | 563 | 0.0 | 827 |
| MS.gene057566.t1 | MTR_7g024390 | 65.478 | 617 | 208 | 4 | 1 | 614 | 1 | 615 | 0.0 | 825 |
| MS.gene057566.t1 | MTR_7g099680 | 65.154 | 617 | 210 | 4 | 1 | 614 | 1 | 615 | 0.0 | 817 |
| MS.gene057566.t1 | MTR_7g024580 | 64.668 | 617 | 213 | 4 | 1 | 614 | 1 | 615 | 0.0 | 816 |
| MS.gene057566.t1 | MTR_7g078190 | 64.239 | 618 | 217 | 3 | 1 | 614 | 1 | 618 | 0.0 | 813 |
| MS.gene057566.t1 | MTR_7g025630 | 64.821 | 614 | 202 | 2 | 1 | 614 | 1 | 600 | 0.0 | 813 |
| MS.gene057566.t1 | MTR_4g063710 | 64.668 | 617 | 213 | 4 | 1 | 614 | 1 | 615 | 0.0 | 812 |
| MS.gene057566.t1 | MTR_7g025740 | 62.921 | 623 | 222 | 3 | 1 | 614 | 1 | 623 | 0.0 | 810 |
| MS.gene057566.t1 | MTR_4g063720 | 64.506 | 617 | 214 | 4 | 1 | 614 | 1 | 615 | 0.0 | 807 |
| MS.gene057566.t1 | MTR_7g078210 | 65.154 | 617 | 212 | 2 | 1 | 614 | 1 | 617 | 0.0 | 806 |
| MS.gene057566.t1 | MTR_4g130540 | 63.695 | 617 | 218 | 5 | 1 | 614 | 1 | 614 | 0.0 | 805 |
| MS.gene057566.t1 | MTR_1g041565 | 66.503 | 612 | 133 | 6 | 6 | 615 | 2 | 543 | 0.0 | 801 |
| MS.gene057566.t1 | MTR_7g451360 | 65.210 | 618 | 153 | 4 | 1 | 615 | 1 | 559 | 0.0 | 798 |
| MS.gene057566.t1 | MTR_7g025260 | 63.668 | 567 | 203 | 2 | 51 | 614 | 21 | 587 | 0.0 | 747 |
| MS.gene057566.t1 | MTR_6g033850 | 56.149 | 618 | 267 | 3 | 1 | 616 | 1 | 616 | 0.0 | 690 |
| MS.gene057566.t1 | MTR_6g033760 | 56.494 | 616 | 264 | 3 | 1 | 614 | 1 | 614 | 0.0 | 684 |
| MS.gene057566.t1 | MTR_6g033870 | 56.260 | 615 | 261 | 4 | 9 | 616 | 10 | 623 | 0.0 | 667 |
| MS.gene057566.t1 | MTR_2g017730 | 54.649 | 613 | 253 | 7 | 8 | 611 | 7 | 603 | 0.0 | 655 |
| MS.gene057566.t1 | MTR_2g032160 | 78.133 | 375 | 82 | 0 | 1 | 375 | 1 | 375 | 0.0 | 633 |
| MS.gene057566.t1 | MTR_2g032160 | 53.398 | 103 | 47 | 1 | 515 | 616 | 362 | 464 | 6.10e-25 | 108 |
| MS.gene057566.t1 | MTR_6g033955 | 53.984 | 615 | 274 | 4 | 9 | 616 | 9 | 621 | 0.0 | 630 |
| MS.gene057566.t1 | MTR_6g033820 | 52.244 | 624 | 287 | 5 | 1 | 616 | 1 | 621 | 0.0 | 624 |
| MS.gene057566.t1 | MTR_8g099945 | 54.499 | 589 | 257 | 8 | 7 | 590 | 36 | 618 | 0.0 | 621 |
| MS.gene057566.t1 | MTR_8g099795 | 54.499 | 589 | 257 | 8 | 7 | 590 | 36 | 618 | 0.0 | 620 |
| MS.gene057566.t1 | MTR_2g040370 | 70.051 | 394 | 114 | 2 | 3 | 396 | 1023 | 1412 | 0.0 | 565 |
| MS.gene057566.t1 | MTR_2g040370 | 67.766 | 394 | 122 | 3 | 3 | 395 | 1407 | 1796 | 1.89e-168 | 525 |
| MS.gene057566.t1 | MTR_2g040370 | 70.051 | 394 | 114 | 2 | 3 | 396 | 1023 | 1412 | 0.0 | 565 |
| MS.gene057566.t1 | MTR_2g040370 | 68.299 | 388 | 118 | 3 | 3 | 389 | 1407 | 1790 | 9.83e-168 | 522 |
| MS.gene057566.t1 | MTR_6g033800 | 52.662 | 526 | 247 | 2 | 92 | 616 | 1 | 525 | 0.0 | 550 |
| MS.gene057566.t1 | MTR_2g040260 | 66.921 | 393 | 126 | 2 | 1 | 393 | 1030 | 1418 | 1.07e-177 | 543 |
| MS.gene057566.t1 | MTR_2g040160 | 66.412 | 393 | 128 | 2 | 1 | 393 | 1101 | 1489 | 2.41e-175 | 537 |
| MS.gene057566.t1 | MTR_2g040350 | 63.861 | 404 | 137 | 4 | 2 | 400 | 813 | 1212 | 2.47e-172 | 523 |
| MS.gene057566.t1 | MTR_2g040350 | 63.861 | 404 | 137 | 4 | 2 | 400 | 1031 | 1430 | 2.23e-170 | 523 |
| MS.gene057566.t1 | MTR_2g040220 | 64.948 | 388 | 132 | 2 | 1 | 386 | 1010 | 1395 | 5.66e-170 | 524 |
| MS.gene057566.t1 | MTR_2g040220 | 50.980 | 102 | 41 | 3 | 444 | 536 | 1394 | 1495 | 1.72e-18 | 90.5 |
| MS.gene057566.t1 | MTR_1g077230 | 79.787 | 282 | 57 | 0 | 1 | 282 | 1 | 282 | 2.97e-168 | 481 |
| MS.gene057566.t1 | MTR_7g026050 | 64.973 | 374 | 101 | 4 | 245 | 615 | 1 | 347 | 1.84e-166 | 479 |
| MS.gene057566.t1 | MTR_2g010020 | 44.572 | 608 | 302 | 14 | 1 | 594 | 44 | 630 | 2.21e-160 | 475 |
| MS.gene057566.t1 | MTR_2g010020 | 44.572 | 608 | 302 | 14 | 1 | 594 | 43 | 629 | 2.96e-160 | 475 |
| MS.gene057566.t1 | MTR_4g092920 | 44.295 | 596 | 299 | 14 | 10 | 594 | 54 | 627 | 1.25e-154 | 460 |
| MS.gene057566.t1 | MTR_2g031670 | 59.383 | 389 | 67 | 3 | 21 | 409 | 43 | 340 | 2.25e-154 | 447 |
| MS.gene057566.t1 | MTR_2g005690 | 45.893 | 560 | 281 | 11 | 8 | 560 | 70 | 614 | 1.56e-147 | 443 |
| MS.gene057566.t1 | MTR_6g034005 | 46.642 | 551 | 264 | 10 | 82 | 616 | 2 | 538 | 4.42e-146 | 439 |
| MS.gene057566.t1 | MTR_7g026080 | 79.184 | 245 | 51 | 0 | 1 | 245 | 1 | 245 | 1.41e-143 | 417 |
| MS.gene057566.t1 | MTR_4g088515 | 72.519 | 262 | 54 | 1 | 8 | 269 | 275 | 518 | 8.73e-133 | 402 |
| MS.gene057566.t1 | MTR_4g088515 | 76.699 | 103 | 24 | 0 | 333 | 435 | 515 | 617 | 2.13e-43 | 165 |
| MS.gene057566.t1 | MTR_4g092920 | 42.690 | 513 | 264 | 12 | 92 | 594 | 1 | 493 | 1.34e-124 | 379 |
| MS.gene057566.t1 | MTR_4g063720 | 55.891 | 331 | 142 | 4 | 287 | 614 | 215 | 544 | 4.90e-118 | 363 |
| MS.gene057566.t1 | MTR_4g063720 | 71.239 | 226 | 63 | 1 | 1 | 226 | 1 | 224 | 7.43e-109 | 339 |
| MS.gene057566.t1 | MTR_1g077240 | 61.279 | 297 | 106 | 3 | 322 | 616 | 1 | 290 | 1.12e-110 | 334 |
| MS.gene057566.t1 | MTR_5g097190 | 63.780 | 254 | 45 | 3 | 3 | 256 | 152 | 358 | 2.14e-104 | 320 |
| MS.gene057566.t1 | MTR_6g478100 | 75.000 | 212 | 39 | 2 | 38 | 249 | 10 | 207 | 2.44e-104 | 318 |
| MS.gene057566.t1 | MTR_6g478100 | 75.758 | 99 | 23 | 1 | 514 | 611 | 208 | 306 | 5.17e-39 | 146 |
| MS.gene057566.t1 | MTR_6g033810 | 49.235 | 327 | 117 | 2 | 91 | 416 | 13 | 291 | 3.55e-100 | 307 |
| MS.gene057566.t1 | MTR_6g033855 | 44.077 | 363 | 118 | 3 | 100 | 462 | 22 | 299 | 2.72e-92 | 287 |
| MS.gene057566.t1 | MTR_7g074540 | 60.804 | 199 | 77 | 1 | 417 | 614 | 1 | 199 | 3.35e-76 | 241 |
| MS.gene057566.t1 | MTR_1g116250 | 52.222 | 270 | 87 | 5 | 348 | 615 | 60 | 289 | 1.95e-75 | 243 |
| MS.gene057566.t1 | MTR_4g012050 | 33.034 | 445 | 278 | 8 | 10 | 439 | 4 | 443 | 6.36e-73 | 251 |
| MS.gene057566.t1 | MTR_2g102180 | 32.798 | 436 | 274 | 7 | 10 | 431 | 4 | 434 | 2.56e-72 | 249 |
| MS.gene057566.t1 | MTR_1207s0010 | 62.500 | 176 | 65 | 1 | 108 | 283 | 1 | 175 | 2.71e-70 | 225 |
| MS.gene057566.t1 | MTR_5g092570 | 33.100 | 429 | 275 | 7 | 10 | 431 | 4 | 427 | 1.32e-67 | 235 |
| MS.gene057566.t1 | MTR_3g051300 | 31.905 | 420 | 280 | 5 | 10 | 428 | 4 | 418 | 4.70e-67 | 233 |
| MS.gene057566.t1 | MTR_5g006180 | 33.333 | 510 | 302 | 13 | 9 | 502 | 29 | 516 | 4.91e-67 | 229 |
| MS.gene057566.t1 | MTR_7g451390 | 60.773 | 181 | 69 | 2 | 437 | 615 | 10 | 190 | 1.50e-66 | 216 |
| MS.gene057566.t1 | MTR_7g026180 | 82.906 | 117 | 20 | 0 | 78 | 194 | 23 | 139 | 7.85e-62 | 208 |
| MS.gene057566.t1 | MTR_7g026180 | 46.083 | 217 | 86 | 4 | 401 | 615 | 143 | 330 | 1.58e-42 | 156 |
| MS.gene057566.t1 | MTR_3g081170 | 30.769 | 442 | 281 | 7 | 12 | 430 | 29 | 468 | 1.97e-61 | 219 |
| MS.gene057566.t1 | MTR_4g115780 | 32.752 | 516 | 307 | 15 | 9 | 495 | 140 | 644 | 1.57e-57 | 206 |
| MS.gene057566.t1 | MTR_5g090110 | 30.153 | 524 | 312 | 14 | 9 | 508 | 28 | 521 | 7.42e-56 | 197 |
| MS.gene057566.t1 | MTR_1g068900 | 61.538 | 143 | 53 | 1 | 427 | 567 | 23 | 165 | 2.67e-49 | 169 |
| MS.gene057566.t1 | MTR_4g107920 | 29.652 | 489 | 303 | 15 | 10 | 478 | 21 | 488 | 2.76e-49 | 180 |
| MS.gene057566.t1 | MTR_6g033910 | 42.358 | 229 | 69 | 4 | 74 | 300 | 19 | 186 | 1.16e-47 | 166 |
| MS.gene057566.t1 | MTR_2g040355 | 32.787 | 427 | 128 | 11 | 189 | 614 | 2 | 270 | 1.18e-47 | 169 |
| MS.gene057566.t1 | MTR_5g005870 | 38.276 | 290 | 168 | 7 | 300 | 586 | 70 | 351 | 4.37e-47 | 171 |
| MS.gene057566.t1 | MTR_4g027235 | 82.667 | 75 | 13 | 0 | 1 | 75 | 1 | 75 | 1.07e-40 | 142 |
| MS.gene057566.t1 | MTR_4g027085 | 82.667 | 75 | 13 | 0 | 1 | 75 | 1 | 75 | 1.07e-40 | 142 |
| MS.gene057566.t1 | MTR_5g005890 | 35.841 | 226 | 94 | 4 | 74 | 298 | 5 | 180 | 3.12e-38 | 140 |
| MS.gene057566.t1 | MTR_7g026095 | 74.444 | 90 | 23 | 0 | 481 | 570 | 256 | 345 | 4.98e-38 | 144 |
| MS.gene057566.t1 | MTR_7g026095 | 57.778 | 90 | 22 | 2 | 86 | 175 | 187 | 260 | 1.56e-22 | 99.8 |
| MS.gene057566.t1 | MTR_7g026190 | 69.388 | 98 | 21 | 2 | 284 | 381 | 5 | 93 | 1.14e-34 | 130 |
| MS.gene057566.t1 | MTR_7g026190 | 49.167 | 120 | 54 | 3 | 497 | 614 | 94 | 208 | 5.48e-22 | 95.1 |
| MS.gene057566.t1 | MTR_6g033805 | 69.863 | 73 | 20 | 1 | 1 | 73 | 1 | 71 | 6.32e-28 | 107 |
| MS.gene057566.t1 | MTR_2g017710 | 35.271 | 258 | 80 | 8 | 225 | 478 | 17 | 191 | 1.87e-27 | 112 |
| MS.gene057566.t1 | MTR_7g021430 | 48.571 | 70 | 36 | 0 | 215 | 284 | 1 | 70 | 4.17e-15 | 74.7 |
| MS.gene057566.t1 | MTR_4g115860 | 42.391 | 92 | 51 | 2 | 397 | 486 | 29 | 120 | 1.93e-14 | 70.5 |
| MS.gene057566.t1 | MTR_3g114360 | 46.226 | 106 | 42 | 1 | 433 | 538 | 175 | 265 | 3.58e-13 | 70.5 |
| MS.gene057566.t1 | MTR_6g033995 | 45.455 | 66 | 30 | 1 | 1 | 66 | 1 | 60 | 5.56e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057566.t1 | AT3G12580 | 64.992 | 617 | 211 | 4 | 1 | 614 | 1 | 615 | 0.0 | 821 |
| MS.gene057566.t1 | AT5G02500 | 64.182 | 617 | 216 | 4 | 1 | 614 | 1 | 615 | 0.0 | 813 |
| MS.gene057566.t1 | AT5G02490 | 63.695 | 617 | 219 | 4 | 1 | 614 | 1 | 615 | 0.0 | 803 |
| MS.gene057566.t1 | AT1G56410 | 64.344 | 617 | 213 | 5 | 1 | 614 | 1 | 613 | 0.0 | 798 |
| MS.gene057566.t1 | AT3G09440 | 63.857 | 617 | 218 | 4 | 1 | 614 | 1 | 615 | 0.0 | 796 |
| MS.gene057566.t1 | AT3G09440 | 63.857 | 617 | 218 | 4 | 1 | 614 | 1 | 615 | 0.0 | 796 |
| MS.gene057566.t1 | AT3G09440 | 63.857 | 617 | 218 | 4 | 1 | 614 | 1 | 615 | 0.0 | 796 |
| MS.gene057566.t1 | AT3G09440 | 63.857 | 617 | 218 | 4 | 1 | 614 | 1 | 615 | 0.0 | 796 |
| MS.gene057566.t1 | AT1G16030 | 61.912 | 617 | 229 | 5 | 1 | 614 | 1 | 614 | 0.0 | 784 |
| MS.gene057566.t1 | AT5G42020 | 54.173 | 611 | 269 | 8 | 7 | 612 | 35 | 639 | 0.0 | 639 |
| MS.gene057566.t1 | AT5G42020 | 54.173 | 611 | 269 | 8 | 7 | 612 | 40 | 644 | 0.0 | 638 |
| MS.gene057566.t1 | AT5G28540 | 54.173 | 611 | 269 | 8 | 7 | 612 | 35 | 639 | 0.0 | 637 |
| MS.gene057566.t1 | AT5G02500 | 74.036 | 389 | 99 | 1 | 1 | 389 | 1 | 387 | 0.0 | 616 |
| MS.gene057566.t1 | AT1G09080 | 53.420 | 614 | 275 | 8 | 7 | 616 | 40 | 646 | 0.0 | 611 |
| MS.gene057566.t1 | AT1G09080 | 53.420 | 614 | 275 | 8 | 7 | 616 | 50 | 656 | 0.0 | 610 |
| MS.gene057566.t1 | AT5G42020 | 49.672 | 610 | 243 | 9 | 7 | 612 | 35 | 584 | 0.0 | 554 |
| MS.gene057566.t1 | AT5G09590 | 46.101 | 577 | 286 | 14 | 10 | 579 | 60 | 618 | 3.74e-153 | 457 |
| MS.gene057566.t1 | AT4G37910 | 45.172 | 580 | 289 | 13 | 10 | 580 | 55 | 614 | 5.35e-149 | 446 |
| MS.gene057566.t1 | AT4G37910 | 45.172 | 580 | 289 | 13 | 10 | 580 | 55 | 614 | 5.35e-149 | 446 |
| MS.gene057566.t1 | AT4G24280 | 45.179 | 560 | 285 | 11 | 8 | 560 | 79 | 623 | 9.15e-147 | 442 |
| MS.gene057566.t1 | AT5G49910 | 45.357 | 560 | 284 | 11 | 8 | 560 | 79 | 623 | 1.62e-146 | 441 |
| MS.gene057566.t1 | AT1G79930 | 32.017 | 481 | 288 | 9 | 10 | 456 | 4 | 479 | 6.85e-76 | 258 |
| MS.gene057566.t1 | AT1G79930 | 32.809 | 445 | 279 | 7 | 10 | 439 | 4 | 443 | 1.22e-75 | 258 |
| MS.gene057566.t1 | AT1G79920 | 31.601 | 481 | 290 | 8 | 10 | 456 | 4 | 479 | 2.54e-75 | 255 |
| MS.gene057566.t1 | AT1G79920 | 31.601 | 481 | 290 | 8 | 10 | 456 | 4 | 479 | 2.54e-75 | 255 |
| MS.gene057566.t1 | AT1G79920 | 31.601 | 481 | 290 | 8 | 10 | 456 | 4 | 479 | 2.54e-75 | 255 |
| MS.gene057566.t1 | AT1G79920 | 31.601 | 481 | 290 | 8 | 10 | 456 | 4 | 479 | 2.54e-75 | 255 |
| MS.gene057566.t1 | AT1G11660 | 34.321 | 405 | 258 | 5 | 10 | 411 | 4 | 403 | 3.56e-73 | 250 |
| MS.gene057566.t1 | AT1G11660 | 34.321 | 405 | 258 | 5 | 10 | 411 | 4 | 403 | 3.56e-73 | 250 |
| MS.gene057566.t1 | AT1G11660 | 34.321 | 405 | 258 | 5 | 10 | 411 | 4 | 403 | 3.56e-73 | 250 |
| MS.gene057566.t1 | AT2G32120 | 34.047 | 514 | 304 | 13 | 9 | 506 | 30 | 524 | 2.12e-70 | 238 |
| MS.gene057566.t1 | AT2G32120 | 34.047 | 514 | 304 | 13 | 9 | 506 | 30 | 524 | 2.12e-70 | 238 |
| MS.gene057566.t1 | AT1G11660 | 35.054 | 368 | 233 | 4 | 47 | 411 | 2 | 366 | 7.30e-67 | 232 |
| MS.gene057566.t1 | AT4G16660 | 29.688 | 448 | 289 | 6 | 6 | 430 | 23 | 467 | 2.06e-59 | 213 |
| MS.gene057566.t1 | AT4G16660 | 29.688 | 448 | 289 | 6 | 6 | 430 | 47 | 491 | 2.59e-59 | 213 |
Find 106 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATAGTTGTTGTACTTT+TGG | 0.196868 | 7.2:-85697282 | None:intergenic |
| TGGCCATTCAAGGTCATTTC+AGG | 0.209361 | 7.2:+85696511 | MS.gene057566:CDS |
| TTAGATGCAAAGAGGTTAAT+TGG | 0.272649 | 7.2:+85696445 | MS.gene057566:intron |
| TGATTATCCGCATAATATTA+AGG | 0.281715 | 7.2:-85696744 | None:intergenic |
| TGCTTTACTATCAATGAAAA+TGG | 0.296170 | 7.2:+85697672 | MS.gene057566:CDS |
| ACATCTTGCATCACCAAGTT+TGG | 0.304507 | 7.2:-85697414 | None:intergenic |
| CCAGATGAGGCTGTTGCTTA+TGG | 0.314371 | 7.2:+85697345 | MS.gene057566:CDS |
| CCATAAGCAACAGCCTCATC+TGG | 0.337884 | 7.2:-85697345 | None:intergenic |
| GATGTTGCTCCTTTGTCTCT+TGG | 0.351484 | 7.2:+85697432 | MS.gene057566:CDS |
| TGCTGAAGAAATCTCATCTA+TGG | 0.352104 | 7.2:+85696591 | MS.gene057566:CDS |
| ATAGTAAAGCATACCTCAAA+AGG | 0.362043 | 7.2:-85697660 | None:intergenic |
| ATAGATGCTGGTGCTATTGC+TGG | 0.363983 | 7.2:+85696721 | MS.gene057566:CDS |
| TAATGACAAACCCTTGATTT+CGG | 0.366275 | 7.2:+85696537 | MS.gene057566:CDS |
| TTCATCTTTGACTTGGGTGG+TGG | 0.368513 | 7.2:+85696838 | MS.gene057566:CDS |
| GAACATCTATTTCACTCTGT+TGG | 0.372500 | 7.2:-85697995 | None:intergenic |
| GCATACACTCAAGCTCCTTC+AGG | 0.372973 | 7.2:-85698028 | None:intergenic |
| TGATAAGGTCTTTCAAGTTA+AGG | 0.384634 | 7.2:+85696891 | MS.gene057566:CDS |
| GAGGTAGATTCTTTATTTCA+AGG | 0.387226 | 7.2:+85697099 | MS.gene057566:CDS |
| AGACCTTATCATTAATTGTA+AGG | 0.388881 | 7.2:-85696879 | None:intergenic |
| CATATTTATTTCCTCAAACT+TGG | 0.388911 | 7.2:-85697151 | None:intergenic |
| CTCACCCTCATAAACTTTGA+TGG | 0.395187 | 7.2:-85697565 | None:intergenic |
| CGCCGTTCTCAATCTCCTTA+AGG | 0.399867 | 7.2:-85697028 | None:intergenic |
| TTGTCTTGCTGATGCCAAAA+TGG | 0.411935 | 7.2:+85697209 | MS.gene057566:CDS |
| AACATCTATTTCACTCTGTT+GGG | 0.414811 | 7.2:-85697994 | None:intergenic |
| AAAAGTACAACAACTATTGC+AGG | 0.418027 | 7.2:+85697284 | MS.gene057566:CDS |
| CAAGTTTGAGGAAATAAATA+TGG | 0.420382 | 7.2:+85697152 | MS.gene057566:CDS |
| GGGGAGAGGACATTGATAAT+AGG | 0.425160 | 7.2:+85696938 | MS.gene057566:CDS |
| CGTGCAGTGGGAATCGATCT+TGG | 0.426595 | 7.2:+85696083 | MS.gene057566:CDS |
| CTTGTACTTAACCGAAATCA+AGG | 0.441866 | 7.2:-85696548 | None:intergenic |
| TCTCTTGGTATCTCAATTCA+AGG | 0.444048 | 7.2:+85697447 | MS.gene057566:CDS |
| CAGATTTGTTTATAATGAGT+TGG | 0.444830 | 7.2:-85698052 | None:intergenic |
| TCTCCTTACAATTAATGATA+AGG | 0.452419 | 7.2:+85696876 | MS.gene057566:CDS |
| TATGATGCTCTGGCCATTCA+AGG | 0.452525 | 7.2:+85696501 | MS.gene057566:CDS |
| TTTCACTGATGATCAAAGAT+TGG | 0.454039 | 7.2:+85696205 | MS.gene057566:CDS |
| CTTGATTTCGGTTAAGTACA+AGG | 0.455898 | 7.2:+85696549 | MS.gene057566:CDS |
| TCATCTTTGACTTGGGTGGT+GGG | 0.462409 | 7.2:+85696839 | MS.gene057566:CDS |
| CTGATGATCAAAGATTGGTT+GGG | 0.464698 | 7.2:+85696210 | MS.gene057566:CDS |
| AATCACTCGTGCCAAGTTTG+AGG | 0.476109 | 7.2:+85697140 | MS.gene057566:CDS |
| ACTGATGATCAAAGATTGGT+TGG | 0.477750 | 7.2:+85696209 | MS.gene057566:CDS |
| CTGCCGGAAACACTCATCTC+GGG | 0.486017 | 7.2:+85696917 | MS.gene057566:CDS |
| TCACCCTCATAAACTTTGAT+GGG | 0.489321 | 7.2:-85697564 | None:intergenic |
| ATGCAAAGAGGTTAATTGGT+AGG | 0.490498 | 7.2:+85696449 | MS.gene057566:CDS |
| CGCTGTCATCACCACCATTG+AGG | 0.494719 | 7.2:+85697080 | MS.gene057566:CDS |
| ATAGGAATGCTAGTATTCCT+AGG | 0.497328 | 7.2:-85697492 | None:intergenic |
| ACTCCTGAAATGACCTTGAA+TGG | 0.498589 | 7.2:-85696514 | None:intergenic |
| GTGAGAACTCAAGAGCCTTA+AGG | 0.498696 | 7.2:+85697013 | MS.gene057566:CDS |
| ATCTAAAGCATTCATTACAT+TGG | 0.499892 | 7.2:-85697850 | None:intergenic |
| TTCGGTTAAGTACAAGGGAC+AGG | 0.503303 | 7.2:+85696555 | MS.gene057566:CDS |
| TTCAAAACGATATGATGCTC+TGG | 0.506462 | 7.2:+85696491 | MS.gene057566:CDS |
| TCATGAGTGTGGTAATTCCT+AGG | 0.511915 | 7.2:+85697475 | MS.gene057566:CDS |
| AAATAAAGAATCTACCTCAA+TGG | 0.513375 | 7.2:-85697094 | None:intergenic |
| ATACATGATGTCGTCCTTGT+CGG | 0.521036 | 7.2:+85697243 | MS.gene057566:CDS |
| GTAACAACTGCATTCTTGAC+AGG | 0.522397 | 7.2:-85696658 | None:intergenic |
| TTTAGATTATTGTGTTTACA+AGG | 0.523212 | 7.2:+85697866 | MS.gene057566:CDS |
| ACTGCCGGAAACACTCATCT+CGG | 0.525372 | 7.2:+85696916 | MS.gene057566:CDS |
| CAAGCTGCTTTGTTGAGCGA+AGG | 0.529415 | 7.2:+85697378 | MS.gene057566:CDS |
| ATCATTGAAATAAGCAGGTA+CGG | 0.536914 | 7.2:-85696680 | None:intergenic |
| ATGAGATTTCTTCAGCACAT+AGG | 0.544260 | 7.2:-85696585 | None:intergenic |
| CGGAAAGCCACAATAGATGC+TGG | 0.544288 | 7.2:+85696709 | MS.gene057566:CDS |
| ACTGCTGCAGCTATTGCGTA+TGG | 0.555701 | 7.2:+85696775 | MS.gene057566:CDS |
| TGAGCATCATTGAAATAAGC+AGG | 0.555903 | 7.2:-85696685 | None:intergenic |
| GGGTGATCGCGAGGAGCACG+TGG | 0.556228 | 7.2:-85697639 | None:intergenic |
| TTTCAAGTTAAGGCTACTGC+CGG | 0.565897 | 7.2:+85696901 | MS.gene057566:CDS |
| TGCAGCTATTGCGTATGGAC+TGG | 0.573148 | 7.2:+85696780 | MS.gene057566:CDS |
| CATAAGCAACAGCCTCATCT+GGG | 0.576751 | 7.2:-85697344 | None:intergenic |
| TAGTAAAGCATACCTCAAAA+GGG | 0.581382 | 7.2:-85697659 | None:intergenic |
| TTGTACTTAACCGAAATCAA+GGG | 0.581463 | 7.2:-85696547 | None:intergenic |
| ATTCCTATCAAGAAAACAGA+AGG | 0.584917 | 7.2:+85697507 | MS.gene057566:CDS |
| AAGTATGAAGGACGTGCAGT+GGG | 0.586872 | 7.2:+85696071 | MS.gene057566:CDS |
| AAAGTATGAAGGACGTGCAG+TGG | 0.587167 | 7.2:+85696070 | MS.gene057566:CDS |
| AGAGGACATTGATAATAGGA+TGG | 0.589461 | 7.2:+85696942 | MS.gene057566:CDS |
| TTCTAGACGAGCCACCGACA+AGG | 0.590640 | 7.2:-85697257 | None:intergenic |
| TCAGTGAAAGCAACACAAGA+AGG | 0.593151 | 7.2:-85696191 | None:intergenic |
| GCTACTGACAACAATCTGCT+TGG | 0.593670 | 7.2:+85697597 | MS.gene057566:CDS |
| TTGCTGGCCTTAATATTATG+CGG | 0.610596 | 7.2:+85696737 | MS.gene057566:CDS |
| AATAGCACCAGCATCTATTG+TGG | 0.610874 | 7.2:-85696716 | None:intergenic |
| CACCCTCATAAACTTTGATG+GGG | 0.611769 | 7.2:-85697563 | None:intergenic |
| ACCTCAAAAGGGTGATCGCG+AGG | 0.616539 | 7.2:-85697648 | None:intergenic |
| TGCCGGAAACACTCATCTCG+GGG | 0.616852 | 7.2:+85696918 | MS.gene057566:CDS |
| TGTTCTTGAAAATCACCTGA+AGG | 0.620051 | 7.2:+85698013 | MS.gene057566:CDS |
| CATGATGTCGTCCTTGTCGG+TGG | 0.620265 | 7.2:+85697246 | MS.gene057566:CDS |
| GATGGTGAACTACTTTGCAC+AGG | 0.621581 | 7.2:+85696960 | MS.gene057566:CDS |
| TGATGATCAAAGATTGGTTG+GGG | 0.623126 | 7.2:+85696211 | MS.gene057566:CDS |
| AGCCTTAAGGAGATTGAGAA+CGG | 0.623363 | 7.2:+85697026 | MS.gene057566:CDS |
| TTGATTTCGGTTAAGTACAA+GGG | 0.625025 | 7.2:+85696550 | MS.gene057566:CDS |
| GGTACTATCAAGTAAACTTG+TGG | 0.625691 | 7.2:-85697973 | None:intergenic |
| GAGATTATTCACAATGACCA+AGG | 0.627593 | 7.2:+85696155 | MS.gene057566:CDS |
| TAAAGAATCTACCTCAATGG+TGG | 0.633251 | 7.2:-85697091 | None:intergenic |
| GAAAGCAACACAAGAAGGTG+TGG | 0.633341 | 7.2:-85696186 | None:intergenic |
| AATCTCATTCATACTACCAG+TGG | 0.634236 | 7.2:-85697724 | None:intergenic |
| TAAGAGCATCAACCCAGATG+AGG | 0.638791 | 7.2:+85697332 | MS.gene057566:CDS |
| ATTGAGATACCAAGAGACAA+AGG | 0.639922 | 7.2:-85697441 | None:intergenic |
| AGCTGAAAATTACCGTGTTG+AGG | 0.641959 | 7.2:+85697806 | MS.gene057566:CDS |
| GATCAATTCTGCAATCACAA+AGG | 0.649185 | 7.2:+85697950 | MS.gene057566:CDS |
| GGACAAGAGAACTAATTGTG+TGG | 0.654792 | 7.2:+85696801 | MS.gene057566:CDS |
| TCAAGGTGACATCATGAGTG+TGG | 0.655130 | 7.2:+85697464 | MS.gene057566:CDS |
| GAAAACAGAAGGTTATGCAA+CGG | 0.657709 | 7.2:+85697518 | MS.gene057566:CDS |
| TACGCAATAGCTGCAGCAGT+AGG | 0.659113 | 7.2:-85696772 | None:intergenic |
| CAAGAGAACTAATTGTGTGG+AGG | 0.667224 | 7.2:+85696804 | MS.gene057566:CDS |
| ACCCTCATAAACTTTGATGG+GGG | 0.671694 | 7.2:-85697562 | None:intergenic |
| CGTATTCGTGCGTTGCTGTG+TGG | 0.676152 | 7.2:+85696111 | MS.gene057566:CDS |
| AAAGATGCGTGAGACTGCAG+AGG | 0.681002 | 7.2:+85696621 | MS.gene057566:CDS |
| CTTATTTCAATGATGCTCAG+CGG | 0.693840 | 7.2:+85696689 | MS.gene057566:CDS |
| GGAGTTTAAGAAGAAGAACA+AGG | 0.695576 | 7.2:+85696981 | MS.gene057566:CDS |
| GCCGGAAACACTCATCTCGG+GGG | 0.729190 | 7.2:+85696919 | MS.gene057566:CDS |
| GGTGATCGCGAGGAGCACGT+GGG | 0.736253 | 7.2:-85697638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTCATTTCTTTATTGT+TGG | + | chr7.2:85696300-85696319 | MS.gene057566:intron | 15.0% |
| !! | AGTAAATTAAATTCTGATCA+GGG | - | chr7.2:85696410-85696429 | None:intergenic | 20.0% |
| !! | TAGTAAATTAAATTCTGATC+AGG | - | chr7.2:85696411-85696430 | None:intergenic | 20.0% |
| !! | TTTAGATTATTGTGTTTACA+AGG | + | chr7.2:85697866-85697885 | MS.gene057566:CDS | 20.0% |
| !!! | AATATTTTCATCTTTGACTT+GGG | + | chr7.2:85696832-85696851 | MS.gene057566:CDS | 20.0% |
| !!! | GATCATTTTTGTAATTTCTT+GGG | - | chr7.2:85697781-85697800 | None:intergenic | 20.0% |
| !!! | TAATATTTTCATCTTTGACT+TGG | + | chr7.2:85696831-85696850 | MS.gene057566:CDS | 20.0% |
| !!! | TGATCATTTTTGTAATTTCT+TGG | - | chr7.2:85697782-85697801 | None:intergenic | 20.0% |
| ! | AAATAAAGAATCTACCTCAA+TGG | - | chr7.2:85697097-85697116 | None:intergenic | 25.0% |
| ! | AGACCTTATCATTAATTGTA+AGG | - | chr7.2:85696882-85696901 | None:intergenic | 25.0% |
| ! | CAAGTTTGAGGAAATAAATA+TGG | + | chr7.2:85697152-85697171 | MS.gene057566:CDS | 25.0% |
| ! | CATATTTATTTCCTCAAACT+TGG | - | chr7.2:85697154-85697173 | None:intergenic | 25.0% |
| ! | TCTCCTTACAATTAATGATA+AGG | + | chr7.2:85696876-85696895 | MS.gene057566:CDS | 25.0% |
| ! | TGATTATCCGCATAATATTA+AGG | - | chr7.2:85696747-85696766 | None:intergenic | 25.0% |
| ! | TGCTTTACTATCAATGAAAA+TGG | + | chr7.2:85697672-85697691 | MS.gene057566:CDS | 25.0% |
| ! | TTGAGGATGAAAAATTTCTA+AGG | + | chr7.2:85697823-85697842 | MS.gene057566:CDS | 25.0% |
| !! | ATCTAAAGCATTCATTACAT+TGG | - | chr7.2:85697853-85697872 | None:intergenic | 25.0% |
| !! | CAGATTTGTTTATAATGAGT+TGG | - | chr7.2:85698055-85698074 | None:intergenic | 25.0% |
| !! | CTTTAAAAATGTTCCAAACT+TGG | + | chr7.2:85697401-85697420 | MS.gene057566:CDS | 25.0% |
| !!! | TTATTTTGTTAGATGCAAAG+AGG | + | chr7.2:85696437-85696456 | MS.gene057566:intron | 25.0% |
| AACATCTATTTCACTCTGTT+GGG | - | chr7.2:85697997-85698016 | None:intergenic | 30.0% | |
| ATAGTAAAGCATACCTCAAA+AGG | - | chr7.2:85697663-85697682 | None:intergenic | 30.0% | |
| ATCATTGAAATAAGCAGGTA+CGG | - | chr7.2:85696683-85696702 | None:intergenic | 30.0% | |
| ATTCCTATCAAGAAAACAGA+AGG | + | chr7.2:85697507-85697526 | MS.gene057566:CDS | 30.0% | |
| TAATGACAAACCCTTGATTT+CGG | + | chr7.2:85696537-85696556 | MS.gene057566:CDS | 30.0% | |
| TAGTAAAGCATACCTCAAAA+GGG | - | chr7.2:85697662-85697681 | None:intergenic | 30.0% | |
| TTAGATGCAAAGAGGTTAAT+TGG | + | chr7.2:85696445-85696464 | MS.gene057566:intron | 30.0% | |
| TTGATTTCGGTTAAGTACAA+GGG | + | chr7.2:85696550-85696569 | MS.gene057566:CDS | 30.0% | |
| TTGTACTTAACCGAAATCAA+GGG | - | chr7.2:85696550-85696569 | None:intergenic | 30.0% | |
| TTTCACTGATGATCAAAGAT+TGG | + | chr7.2:85696205-85696224 | MS.gene057566:CDS | 30.0% | |
| ! | AAAAGTACAACAACTATTGC+AGG | + | chr7.2:85697284-85697303 | MS.gene057566:CDS | 30.0% |
| ! | GAAATTTTTCATCCTCAACA+CGG | - | chr7.2:85697821-85697840 | None:intergenic | 30.0% |
| ! | GAGGTAGATTCTTTATTTCA+AGG | + | chr7.2:85697099-85697118 | MS.gene057566:CDS | 30.0% |
| ! | GGATGAAAAATTTCTAAGGA+AGG | + | chr7.2:85697827-85697846 | MS.gene057566:CDS | 30.0% |
| ! | TAACCTTCTGTTTTCTTGAT+AGG | - | chr7.2:85697513-85697532 | None:intergenic | 30.0% |
| ! | TACCAAAAACAGTGTTTTCA+GGG | - | chr7.2:85696265-85696284 | None:intergenic | 30.0% |
| ! | TATAGCACTTTTGTCCATTT+TGG | - | chr7.2:85697226-85697245 | None:intergenic | 30.0% |
| ! | TGCAATAGTTGTTGTACTTT+TGG | - | chr7.2:85697285-85697304 | None:intergenic | 30.0% |
| ! | TTACCAAAAACAGTGTTTTC+AGG | - | chr7.2:85696266-85696285 | None:intergenic | 30.0% |
| !! | TGATAAGGTCTTTCAAGTTA+AGG | + | chr7.2:85696891-85696910 | MS.gene057566:CDS | 30.0% |
| AATCTCATTCATACTACCAG+TGG | - | chr7.2:85697727-85697746 | None:intergenic | 35.0% | |
| ACTGATGATCAAAGATTGGT+TGG | + | chr7.2:85696209-85696228 | MS.gene057566:CDS | 35.0% | |
| ATAGGAATGCTAGTATTCCT+AGG | - | chr7.2:85697495-85697514 | None:intergenic | 35.0% | |
| ATGAGATTTCTTCAGCACAT+AGG | - | chr7.2:85696588-85696607 | None:intergenic | 35.0% | |
| ATGCAAAGAGGTTAATTGGT+AGG | + | chr7.2:85696449-85696468 | MS.gene057566:CDS | 35.0% | |
| ATTGAGATACCAAGAGACAA+AGG | - | chr7.2:85697444-85697463 | None:intergenic | 35.0% | |
| CTTATTTCAATGATGCTCAG+CGG | + | chr7.2:85696689-85696708 | MS.gene057566:CDS | 35.0% | |
| CTTGATTTCGGTTAAGTACA+AGG | + | chr7.2:85696549-85696568 | MS.gene057566:CDS | 35.0% | |
| CTTGTACTTAACCGAAATCA+AGG | - | chr7.2:85696551-85696570 | None:intergenic | 35.0% | |
| GAAAACAGAAGGTTATGCAA+CGG | + | chr7.2:85697518-85697537 | MS.gene057566:CDS | 35.0% | |
| GAACATCTATTTCACTCTGT+TGG | - | chr7.2:85697998-85698017 | None:intergenic | 35.0% | |
| GAGATTATTCACAATGACCA+AGG | + | chr7.2:85696155-85696174 | MS.gene057566:CDS | 35.0% | |
| GATCAATTCTGCAATCACAA+AGG | + | chr7.2:85697950-85697969 | MS.gene057566:CDS | 35.0% | |
| GGAGTTTAAGAAGAAGAACA+AGG | + | chr7.2:85696981-85697000 | MS.gene057566:CDS | 35.0% | |
| GGTACTATCAAGTAAACTTG+TGG | - | chr7.2:85697976-85697995 | None:intergenic | 35.0% | |
| TAAAGAATCTACCTCAATGG+TGG | - | chr7.2:85697094-85697113 | None:intergenic | 35.0% | |
| TCACCCTCATAAACTTTGAT+GGG | - | chr7.2:85697567-85697586 | None:intergenic | 35.0% | |
| TCTCTTGGTATCTCAATTCA+AGG | + | chr7.2:85697447-85697466 | MS.gene057566:CDS | 35.0% | |
| TCTGCAAATGAAAAATCCAC+TGG | + | chr7.2:85697708-85697727 | MS.gene057566:CDS | 35.0% | |
| TGAGCATCATTGAAATAAGC+AGG | - | chr7.2:85696688-85696707 | None:intergenic | 35.0% | |
| TGCTGAAGAAATCTCATCTA+TGG | + | chr7.2:85696591-85696610 | MS.gene057566:CDS | 35.0% | |
| TGTTCTTGAAAATCACCTGA+AGG | + | chr7.2:85698013-85698032 | MS.gene057566:CDS | 35.0% | |
| TTCAAAACGATATGATGCTC+TGG | + | chr7.2:85696491-85696510 | MS.gene057566:CDS | 35.0% | |
| ! | AACCCTGAAAACACTGTTTT+TGG | + | chr7.2:85696260-85696279 | MS.gene057566:CDS | 35.0% |
| ! | AGAGGACATTGATAATAGGA+TGG | + | chr7.2:85696942-85696961 | MS.gene057566:CDS | 35.0% |
| ! | CTGATGATCAAAGATTGGTT+GGG | + | chr7.2:85696210-85696229 | MS.gene057566:CDS | 35.0% |
| ! | TATTGCAGGAATTTTTCGCA+GGG | + | chr7.2:85697298-85697317 | MS.gene057566:CDS | 35.0% |
| ! | TGATGATCAAAGATTGGTTG+GGG | + | chr7.2:85696211-85696230 | MS.gene057566:CDS | 35.0% |
| !! | TTGCTGGCCTTAATATTATG+CGG | + | chr7.2:85696737-85696756 | MS.gene057566:CDS | 35.0% |
| !!! | ATTTTCATCTTTGACTTGGG+TGG | + | chr7.2:85696835-85696854 | MS.gene057566:CDS | 35.0% |
| AATAGCACCAGCATCTATTG+TGG | - | chr7.2:85696719-85696738 | None:intergenic | 40.0% | |
| ACATCTTGCATCACCAAGTT+TGG | - | chr7.2:85697417-85697436 | None:intergenic | 40.0% | |
| ACCCTCATAAACTTTGATGG+GGG | - | chr7.2:85697565-85697584 | None:intergenic | 40.0% | |
| ACTCCTGAAATGACCTTGAA+TGG | - | chr7.2:85696517-85696536 | None:intergenic | 40.0% | |
| AGCCTTAAGGAGATTGAGAA+CGG | + | chr7.2:85697026-85697045 | MS.gene057566:CDS | 40.0% | |
| AGCTGAAAATTACCGTGTTG+AGG | + | chr7.2:85697806-85697825 | MS.gene057566:CDS | 40.0% | |
| ATACATGATGTCGTCCTTGT+CGG | + | chr7.2:85697243-85697262 | MS.gene057566:CDS | 40.0% | |
| CAAGAGAACTAATTGTGTGG+AGG | + | chr7.2:85696804-85696823 | MS.gene057566:CDS | 40.0% | |
| CACCCTCATAAACTTTGATG+GGG | - | chr7.2:85697566-85697585 | None:intergenic | 40.0% | |
| CTCACCCTCATAAACTTTGA+TGG | - | chr7.2:85697568-85697587 | None:intergenic | 40.0% | |
| GGACAAGAGAACTAATTGTG+TGG | + | chr7.2:85696801-85696820 | MS.gene057566:CDS | 40.0% | |
| GTAACAACTGCATTCTTGAC+AGG | - | chr7.2:85696661-85696680 | None:intergenic | 40.0% | |
| TCAGTGAAAGCAACACAAGA+AGG | - | chr7.2:85696194-85696213 | None:intergenic | 40.0% | |
| TCATGAGTGTGGTAATTCCT+AGG | + | chr7.2:85697475-85697494 | MS.gene057566:CDS | 40.0% | |
| TTGTCTTGCTGATGCCAAAA+TGG | + | chr7.2:85697209-85697228 | MS.gene057566:CDS | 40.0% | |
| ! | ATACGATGTGTTGACACTGT+TGG | + | chr7.2:85696366-85696385 | MS.gene057566:intron | 40.0% |
| ! | CTATTGCAGGAATTTTTCGC+AGG | + | chr7.2:85697297-85697316 | MS.gene057566:CDS | 40.0% |
| ! | GGATCTTTTCAACGAGTGTT+TGG | + | chr7.2:85697173-85697192 | MS.gene057566:CDS | 40.0% |
| !! | AACAGTGTTTTCAGGGTTTG+TGG | - | chr7.2:85696258-85696277 | None:intergenic | 40.0% |
| !! | TTTCAAGTTAAGGCTACTGC+CGG | + | chr7.2:85696901-85696920 | MS.gene057566:CDS | 40.0% |
| AAAGTATGAAGGACGTGCAG+TGG | + | chr7.2:85696070-85696089 | MS.gene057566:CDS | 45.0% | |
| AAGTATGAAGGACGTGCAGT+GGG | + | chr7.2:85696071-85696090 | MS.gene057566:CDS | 45.0% | |
| AATCACTCGTGCCAAGTTTG+AGG | + | chr7.2:85697140-85697159 | MS.gene057566:CDS | 45.0% | |
| AGCCCCCATCAAAGTTTATG+AGG | + | chr7.2:85697560-85697579 | MS.gene057566:CDS | 45.0% | |
| CATAAGCAACAGCCTCATCT+GGG | - | chr7.2:85697347-85697366 | None:intergenic | 45.0% | |
| GAAAGCAACACAAGAAGGTG+TGG | - | chr7.2:85696189-85696208 | None:intergenic | 45.0% | |
| GATGGTGAACTACTTTGCAC+AGG | + | chr7.2:85696960-85696979 | MS.gene057566:CDS | 45.0% | |
| GATGTTGCTCCTTTGTCTCT+TGG | + | chr7.2:85697432-85697451 | MS.gene057566:CDS | 45.0% | |
| GCCCCCATCAAAGTTTATGA+GGG | + | chr7.2:85697561-85697580 | MS.gene057566:CDS | 45.0% | |
| GCTACTGACAACAATCTGCT+TGG | + | chr7.2:85697597-85697616 | MS.gene057566:CDS | 45.0% | |
| GTGAGAACTCAAGAGCCTTA+AGG | + | chr7.2:85697013-85697032 | MS.gene057566:CDS | 45.0% | |
| TATGATGCTCTGGCCATTCA+AGG | + | chr7.2:85696501-85696520 | MS.gene057566:CDS | 45.0% | |
| TCAAGGTGACATCATGAGTG+TGG | + | chr7.2:85697464-85697483 | MS.gene057566:CDS | 45.0% | |
| TGGCCATTCAAGGTCATTTC+AGG | + | chr7.2:85696511-85696530 | MS.gene057566:CDS | 45.0% | |
| TTCGGTTAAGTACAAGGGAC+AGG | + | chr7.2:85696555-85696574 | MS.gene057566:CDS | 45.0% | |
| ! | GGGGAGAGGACATTGATAAT+AGG | + | chr7.2:85696938-85696957 | MS.gene057566:CDS | 45.0% |
| !! | ATAGATGCTGGTGCTATTGC+TGG | + | chr7.2:85696721-85696740 | MS.gene057566:CDS | 45.0% |
| !! | TAAGAGCATCAACCCAGATG+AGG | + | chr7.2:85697332-85697351 | MS.gene057566:CDS | 45.0% |
| !! | TCATCTTTGACTTGGGTGGT+GGG | + | chr7.2:85696839-85696858 | MS.gene057566:CDS | 45.0% |
| !! | TTCATCTTTGACTTGGGTGG+TGG | + | chr7.2:85696838-85696857 | MS.gene057566:CDS | 45.0% |
| !!! | AAGGTGTGGTTTTGTTGCCT+TGG | - | chr7.2:85696175-85696194 | None:intergenic | 45.0% |
| !!! | TGAGACTGCAGAGGCATTTT+TGG | + | chr7.2:85696630-85696649 | MS.gene057566:CDS | 45.0% |
| AAAGATGCGTGAGACTGCAG+AGG | + | chr7.2:85696621-85696640 | MS.gene057566:CDS | 50.0% | |
| ACTGCCGGAAACACTCATCT+CGG | + | chr7.2:85696916-85696935 | MS.gene057566:CDS | 50.0% | |
| ACTGCTGCAGCTATTGCGTA+TGG | + | chr7.2:85696775-85696794 | MS.gene057566:CDS | 50.0% | |
| CCATAAGCAACAGCCTCATC+TGG | - | chr7.2:85697348-85697367 | None:intergenic | 50.0% | |
| CGCCGTTCTCAATCTCCTTA+AGG | - | chr7.2:85697031-85697050 | None:intergenic | 50.0% | |
| CGGAAAGCCACAATAGATGC+TGG | + | chr7.2:85696709-85696728 | MS.gene057566:CDS | 50.0% | |
| CTTTGATGGGGGCTGAAGTT+TGG | - | chr7.2:85697554-85697573 | None:intergenic | 50.0% | |
| GCATACACTCAAGCTCCTTC+AGG | - | chr7.2:85698031-85698050 | None:intergenic | 50.0% | |
| TACGCAATAGCTGCAGCAGT+AGG | - | chr7.2:85696775-85696794 | None:intergenic | 50.0% | |
| TGCAGCTATTGCGTATGGAC+TGG | + | chr7.2:85696780-85696799 | MS.gene057566:CDS | 50.0% | |
| ! | CAAGCTGCTTTGTTGAGCGA+AGG | + | chr7.2:85697378-85697397 | MS.gene057566:CDS | 50.0% |
| ! | CCAGATGAGGCTGTTGCTTA+TGG | + | chr7.2:85697345-85697364 | MS.gene057566:CDS | 50.0% |
| ! | GCAGGAATTTTTCGCAGGGA+AGG | + | chr7.2:85697302-85697321 | MS.gene057566:CDS | 50.0% |
| AAACACTCATCTCGGGGGAG+AGG | + | chr7.2:85696924-85696943 | MS.gene057566:CDS | 55.0% | |
| ACCTCAAAAGGGTGATCGCG+AGG | - | chr7.2:85697651-85697670 | None:intergenic | 55.0% | |
| CATGATGTCGTCCTTGTCGG+TGG | + | chr7.2:85697246-85697265 | MS.gene057566:CDS | 55.0% | |
| CGCTGTCATCACCACCATTG+AGG | + | chr7.2:85697080-85697099 | MS.gene057566:CDS | 55.0% | |
| CGTATTCGTGCGTTGCTGTG+TGG | + | chr7.2:85696111-85696130 | MS.gene057566:CDS | 55.0% | |
| CGTGCAGTGGGAATCGATCT+TGG | + | chr7.2:85696083-85696102 | MS.gene057566:CDS | 55.0% | |
| CTGCCGGAAACACTCATCTC+GGG | + | chr7.2:85696917-85696936 | MS.gene057566:CDS | 55.0% | |
| TCCCCCGAGATGAGTGTTTC+CGG | - | chr7.2:85696923-85696942 | None:intergenic | 55.0% | |
| TGCCGGAAACACTCATCTCG+GGG | + | chr7.2:85696918-85696937 | MS.gene057566:CDS | 55.0% | |
| TTCTAGACGAGCCACCGACA+AGG | - | chr7.2:85697260-85697279 | None:intergenic | 55.0% | |
| ! | TCCTCGCGATCACCCTTTTG+AGG | + | chr7.2:85697647-85697666 | MS.gene057566:CDS | 55.0% |
| GCCGGAAACACTCATCTCGG+GGG | + | chr7.2:85696919-85696938 | MS.gene057566:CDS | 60.0% | |
| ! | GGTGATCGCGAGGAGCACGT+GGG | - | chr7.2:85697641-85697660 | None:intergenic | 65.0% |
| ! | GGGTGATCGCGAGGAGCACG+TGG | - | chr7.2:85697642-85697661 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 85696062 | 85698079 | 85696062 | ID=MS.gene057566 |
| chr7.2 | mRNA | 85696062 | 85698079 | 85696062 | ID=MS.gene057566.t1;Parent=MS.gene057566 |
| chr7.2 | exon | 85696062 | 85696281 | 85696062 | ID=MS.gene057566.t1.exon1;Parent=MS.gene057566.t1 |
| chr7.2 | CDS | 85696062 | 85696281 | 85696062 | ID=cds.MS.gene057566.t1;Parent=MS.gene057566.t1 |
| chr7.2 | exon | 85696449 | 85698079 | 85696449 | ID=MS.gene057566.t1.exon2;Parent=MS.gene057566.t1 |
| chr7.2 | CDS | 85696449 | 85698079 | 85696449 | ID=cds.MS.gene057566.t1;Parent=MS.gene057566.t1 |
| Gene Sequence |
| Protein sequence |
