Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49538.t1 | AES77518.1 | 89.3 | 616 | 54 | 1 | 1 | 616 | 1 | 604 | 7.60E-305 | 1055.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49538.t1 | P09189 | 65.6 | 617 | 207 | 4 | 1 | 614 | 1 | 615 | 3.9e-225 | 782.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49538.t1 | G7L328 | 89.3 | 616 | 54 | 1 | 1 | 616 | 1 | 604 | 5.5e-305 | 1055.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052447 | MS.gene49538 | 0.816432 | 5.55E-52 | -1.69E-46 |
| MS.gene057566 | MS.gene49538 | 0.837546 | 4.88E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49538.t1 | MTR_7g011590 | 89.286 | 616 | 54 | 1 | 1 | 616 | 1 | 604 | 0.0 | 1100 |
| MS.gene49538.t1 | MTR_5g066800 | 79.777 | 628 | 115 | 2 | 1 | 616 | 1 | 628 | 0.0 | 1032 |
| MS.gene49538.t1 | MTR_7g026110 | 80.032 | 616 | 122 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1024 |
| MS.gene49538.t1 | MTR_7g021440 | 77.325 | 613 | 138 | 1 | 1 | 612 | 1 | 613 | 0.0 | 990 |
| MS.gene49538.t1 | MTR_2g038260 | 77.670 | 618 | 134 | 4 | 1 | 615 | 1 | 617 | 0.0 | 988 |
| MS.gene49538.t1 | MTR_8g103930 | 77.778 | 630 | 110 | 5 | 1 | 616 | 1 | 614 | 0.0 | 982 |
| MS.gene49538.t1 | MTR_2g032550 | 73.990 | 619 | 157 | 4 | 1 | 615 | 1 | 619 | 0.0 | 950 |
| MS.gene49538.t1 | MTR_7g025770 | 74.068 | 617 | 158 | 2 | 1 | 615 | 1 | 617 | 0.0 | 949 |
| MS.gene49538.t1 | MTR_4g079590 | 74.795 | 611 | 152 | 2 | 1 | 609 | 1 | 611 | 0.0 | 946 |
| MS.gene49538.t1 | MTR_7g451380 | 73.139 | 618 | 163 | 2 | 1 | 615 | 1 | 618 | 0.0 | 939 |
| MS.gene49538.t1 | MTR_7g029415 | 74.472 | 615 | 152 | 4 | 3 | 615 | 12 | 623 | 0.0 | 934 |
| MS.gene49538.t1 | MTR_7g026170 | 73.906 | 617 | 159 | 2 | 1 | 615 | 1 | 617 | 0.0 | 930 |
| MS.gene49538.t1 | MTR_7g026140 | 72.358 | 615 | 150 | 5 | 1 | 612 | 1 | 598 | 0.0 | 905 |
| MS.gene49538.t1 | MTR_2g038270 | 70.175 | 627 | 176 | 4 | 1 | 616 | 1 | 627 | 0.0 | 901 |
| MS.gene49538.t1 | MTR_7g026130 | 72.330 | 618 | 164 | 3 | 1 | 612 | 1 | 617 | 0.0 | 898 |
| MS.gene49538.t1 | MTR_7g026130 | 58.333 | 84 | 32 | 1 | 532 | 612 | 620 | 703 | 4.81e-19 | 91.7 |
| MS.gene49538.t1 | MTR_2g022050 | 71.890 | 619 | 171 | 3 | 1 | 616 | 1 | 619 | 0.0 | 892 |
| MS.gene49538.t1 | MTR_4g027145 | 70.111 | 629 | 174 | 4 | 1 | 615 | 1 | 629 | 0.0 | 888 |
| MS.gene49538.t1 | MTR_7g074460 | 70.894 | 615 | 160 | 2 | 1 | 614 | 1 | 597 | 0.0 | 882 |
| MS.gene49538.t1 | MTR_2g437440 | 68.982 | 619 | 171 | 4 | 1 | 616 | 1 | 601 | 0.0 | 870 |
| MS.gene49538.t1 | MTR_1g017130 | 70.328 | 610 | 141 | 3 | 1 | 609 | 1 | 571 | 0.0 | 868 |
| MS.gene49538.t1 | MTR_7g025720 | 67.101 | 614 | 202 | 0 | 1 | 614 | 1 | 614 | 0.0 | 862 |
| MS.gene49538.t1 | MTR_8g032650 | 67.105 | 608 | 200 | 0 | 1 | 608 | 1 | 608 | 0.0 | 858 |
| MS.gene49538.t1 | MTR_7g025620 | 66.395 | 613 | 206 | 0 | 1 | 613 | 1 | 613 | 0.0 | 853 |
| MS.gene49538.t1 | MTR_7g025760 | 65.574 | 610 | 209 | 1 | 1 | 609 | 1 | 610 | 0.0 | 851 |
| MS.gene49538.t1 | MTR_7g007000 | 68.994 | 616 | 143 | 5 | 1 | 612 | 1 | 572 | 0.0 | 851 |
| MS.gene49538.t1 | MTR_7g024030 | 67.162 | 606 | 199 | 0 | 1 | 606 | 1 | 606 | 0.0 | 847 |
| MS.gene49538.t1 | MTR_2g032580 | 67.581 | 620 | 165 | 6 | 1 | 616 | 1 | 588 | 0.0 | 843 |
| MS.gene49538.t1 | MTR_7g026030 | 64.821 | 614 | 216 | 0 | 1 | 614 | 1 | 614 | 0.0 | 842 |
| MS.gene49538.t1 | MTR_7g025820 | 67.845 | 594 | 190 | 1 | 1 | 593 | 1 | 594 | 0.0 | 840 |
| MS.gene49538.t1 | MTR_7g025790 | 65.961 | 614 | 209 | 0 | 1 | 614 | 1 | 614 | 0.0 | 838 |
| MS.gene49538.t1 | MTR_7g035155 | 68.882 | 617 | 136 | 5 | 1 | 615 | 1 | 563 | 0.0 | 837 |
| MS.gene49538.t1 | MTR_7g026090 | 66.395 | 613 | 203 | 2 | 1 | 612 | 1 | 611 | 0.0 | 837 |
| MS.gene49538.t1 | MTR_7g024390 | 65.640 | 617 | 207 | 4 | 1 | 614 | 1 | 615 | 0.0 | 831 |
| MS.gene49538.t1 | MTR_7g099680 | 65.316 | 617 | 209 | 4 | 1 | 614 | 1 | 615 | 0.0 | 823 |
| MS.gene49538.t1 | MTR_7g024580 | 64.830 | 617 | 212 | 4 | 1 | 614 | 1 | 615 | 0.0 | 822 |
| MS.gene49538.t1 | MTR_7g025740 | 63.754 | 618 | 215 | 3 | 1 | 609 | 1 | 618 | 0.0 | 819 |
| MS.gene49538.t1 | MTR_4g063710 | 64.830 | 617 | 212 | 4 | 1 | 614 | 1 | 615 | 0.0 | 818 |
| MS.gene49538.t1 | MTR_7g078190 | 64.600 | 613 | 213 | 3 | 1 | 609 | 1 | 613 | 0.0 | 813 |
| MS.gene49538.t1 | MTR_4g063720 | 64.668 | 617 | 213 | 4 | 1 | 614 | 1 | 615 | 0.0 | 813 |
| MS.gene49538.t1 | MTR_7g025630 | 65.353 | 609 | 197 | 2 | 1 | 609 | 1 | 595 | 0.0 | 811 |
| MS.gene49538.t1 | MTR_4g130540 | 63.695 | 617 | 218 | 5 | 1 | 614 | 1 | 614 | 0.0 | 808 |
| MS.gene49538.t1 | MTR_7g078210 | 64.992 | 617 | 213 | 2 | 1 | 614 | 1 | 617 | 0.0 | 808 |
| MS.gene49538.t1 | MTR_1g041565 | 66.667 | 612 | 132 | 6 | 6 | 615 | 2 | 543 | 0.0 | 805 |
| MS.gene49538.t1 | MTR_7g451360 | 65.696 | 618 | 150 | 4 | 1 | 615 | 1 | 559 | 0.0 | 805 |
| MS.gene49538.t1 | MTR_7g025260 | 63.668 | 567 | 203 | 2 | 51 | 614 | 21 | 587 | 0.0 | 749 |
| MS.gene49538.t1 | MTR_6g033850 | 56.634 | 618 | 264 | 3 | 1 | 616 | 1 | 616 | 0.0 | 700 |
| MS.gene49538.t1 | MTR_6g033760 | 56.656 | 616 | 263 | 3 | 1 | 614 | 1 | 614 | 0.0 | 690 |
| MS.gene49538.t1 | MTR_6g033870 | 55.935 | 615 | 263 | 4 | 9 | 616 | 10 | 623 | 0.0 | 664 |
| MS.gene49538.t1 | MTR_2g017730 | 54.309 | 615 | 256 | 7 | 6 | 611 | 5 | 603 | 0.0 | 656 |
| MS.gene49538.t1 | MTR_2g032160 | 77.600 | 375 | 84 | 0 | 1 | 375 | 1 | 375 | 0.0 | 632 |
| MS.gene49538.t1 | MTR_2g032160 | 55.340 | 103 | 45 | 1 | 515 | 616 | 362 | 464 | 1.23e-26 | 114 |
| MS.gene49538.t1 | MTR_6g033955 | 53.984 | 615 | 274 | 4 | 9 | 616 | 9 | 621 | 0.0 | 629 |
| MS.gene49538.t1 | MTR_8g099945 | 54.669 | 589 | 256 | 8 | 7 | 590 | 36 | 618 | 0.0 | 628 |
| MS.gene49538.t1 | MTR_6g033820 | 52.404 | 624 | 286 | 5 | 1 | 616 | 1 | 621 | 0.0 | 627 |
| MS.gene49538.t1 | MTR_8g099795 | 54.669 | 589 | 256 | 8 | 7 | 590 | 36 | 618 | 0.0 | 626 |
| MS.gene49538.t1 | MTR_2g040370 | 70.051 | 394 | 114 | 2 | 3 | 396 | 1023 | 1412 | 0.0 | 566 |
| MS.gene49538.t1 | MTR_2g040370 | 68.299 | 388 | 118 | 3 | 3 | 389 | 1407 | 1790 | 9.34e-168 | 523 |
| MS.gene49538.t1 | MTR_2g040370 | 70.051 | 394 | 114 | 2 | 3 | 396 | 1023 | 1412 | 0.0 | 566 |
| MS.gene49538.t1 | MTR_2g040370 | 67.766 | 394 | 122 | 3 | 3 | 395 | 1407 | 1796 | 2.26e-168 | 525 |
| MS.gene49538.t1 | MTR_6g033800 | 53.042 | 526 | 245 | 2 | 92 | 616 | 1 | 525 | 0.0 | 556 |
| MS.gene49538.t1 | MTR_2g040260 | 66.085 | 401 | 131 | 3 | 1 | 400 | 1030 | 1426 | 2.87e-177 | 542 |
| MS.gene49538.t1 | MTR_2g040160 | 65.586 | 401 | 133 | 3 | 1 | 400 | 1101 | 1497 | 6.47e-175 | 536 |
| MS.gene49538.t1 | MTR_2g040350 | 63.861 | 404 | 137 | 4 | 2 | 400 | 813 | 1212 | 1.95e-172 | 523 |
| MS.gene49538.t1 | MTR_2g040350 | 63.861 | 404 | 137 | 4 | 2 | 400 | 1031 | 1430 | 1.69e-170 | 523 |
| MS.gene49538.t1 | MTR_2g040220 | 64.691 | 388 | 133 | 2 | 1 | 386 | 1010 | 1395 | 1.65e-169 | 523 |
| MS.gene49538.t1 | MTR_2g040220 | 50.980 | 102 | 41 | 3 | 444 | 536 | 1394 | 1495 | 7.74e-20 | 95.1 |
| MS.gene49538.t1 | MTR_7g026050 | 65.775 | 374 | 98 | 4 | 245 | 615 | 1 | 347 | 5.41e-168 | 483 |
| MS.gene49538.t1 | MTR_1g077230 | 79.433 | 282 | 58 | 0 | 1 | 282 | 1 | 282 | 1.44e-167 | 479 |
| MS.gene49538.t1 | MTR_2g010020 | 44.884 | 606 | 303 | 14 | 1 | 594 | 43 | 629 | 1.76e-160 | 476 |
| MS.gene49538.t1 | MTR_2g010020 | 44.884 | 606 | 303 | 14 | 1 | 594 | 44 | 630 | 1.86e-160 | 475 |
| MS.gene49538.t1 | MTR_2g031670 | 59.897 | 389 | 65 | 4 | 21 | 409 | 43 | 340 | 2.32e-155 | 450 |
| MS.gene49538.t1 | MTR_4g092920 | 44.444 | 594 | 301 | 14 | 10 | 594 | 54 | 627 | 1.81e-154 | 460 |
| MS.gene49538.t1 | MTR_2g005690 | 46.071 | 560 | 280 | 11 | 8 | 560 | 70 | 614 | 2.07e-148 | 446 |
| MS.gene49538.t1 | MTR_6g034005 | 46.461 | 551 | 265 | 10 | 82 | 616 | 2 | 538 | 1.72e-145 | 438 |
| MS.gene49538.t1 | MTR_7g026080 | 78.776 | 245 | 52 | 0 | 1 | 245 | 1 | 245 | 6.80e-143 | 415 |
| MS.gene49538.t1 | MTR_4g088515 | 72.137 | 262 | 55 | 1 | 8 | 269 | 275 | 518 | 2.88e-132 | 401 |
| MS.gene49538.t1 | MTR_4g088515 | 76.699 | 103 | 24 | 0 | 333 | 435 | 515 | 617 | 9.91e-43 | 163 |
| MS.gene49538.t1 | MTR_4g092920 | 42.857 | 511 | 266 | 12 | 92 | 594 | 1 | 493 | 2.75e-124 | 378 |
| MS.gene49538.t1 | MTR_4g063720 | 56.495 | 331 | 140 | 4 | 287 | 614 | 215 | 544 | 3.36e-121 | 371 |
| MS.gene49538.t1 | MTR_4g063720 | 70.796 | 226 | 64 | 1 | 1 | 226 | 1 | 224 | 3.77e-108 | 337 |
| MS.gene49538.t1 | MTR_1g077240 | 61.279 | 297 | 106 | 3 | 322 | 616 | 1 | 290 | 6.69e-112 | 337 |
| MS.gene49538.t1 | MTR_5g097190 | 63.780 | 254 | 45 | 3 | 3 | 256 | 152 | 358 | 1.27e-104 | 321 |
| MS.gene49538.t1 | MTR_6g478100 | 74.528 | 212 | 40 | 2 | 38 | 249 | 10 | 207 | 1.44e-103 | 317 |
| MS.gene49538.t1 | MTR_6g478100 | 76.768 | 99 | 22 | 1 | 514 | 611 | 208 | 306 | 6.56e-40 | 149 |
| MS.gene49538.t1 | MTR_6g033810 | 49.541 | 327 | 116 | 2 | 91 | 416 | 13 | 291 | 2.17e-100 | 307 |
| MS.gene49538.t1 | MTR_6g033855 | 44.077 | 363 | 118 | 3 | 100 | 462 | 22 | 299 | 1.27e-91 | 286 |
| MS.gene49538.t1 | MTR_1g116250 | 52.963 | 270 | 85 | 5 | 348 | 615 | 60 | 289 | 8.06e-78 | 249 |
| MS.gene49538.t1 | MTR_7g074540 | 61.809 | 199 | 75 | 1 | 417 | 614 | 1 | 199 | 8.08e-78 | 246 |
| MS.gene49538.t1 | MTR_4g012050 | 32.120 | 467 | 286 | 8 | 10 | 450 | 4 | 465 | 1.39e-72 | 250 |
| MS.gene49538.t1 | MTR_2g102180 | 32.802 | 439 | 270 | 8 | 10 | 431 | 4 | 434 | 4.10e-71 | 246 |
| MS.gene49538.t1 | MTR_7g451390 | 62.983 | 181 | 65 | 2 | 437 | 615 | 10 | 190 | 4.84e-70 | 225 |
| MS.gene49538.t1 | MTR_1207s0010 | 61.932 | 176 | 66 | 1 | 108 | 283 | 1 | 175 | 1.56e-69 | 223 |
| MS.gene49538.t1 | MTR_5g006180 | 33.529 | 510 | 301 | 13 | 9 | 502 | 29 | 516 | 4.37e-69 | 234 |
| MS.gene49538.t1 | MTR_5g092570 | 33.100 | 429 | 275 | 7 | 10 | 431 | 4 | 427 | 1.09e-67 | 235 |
| MS.gene49538.t1 | MTR_3g051300 | 31.905 | 420 | 280 | 5 | 10 | 428 | 4 | 418 | 2.18e-66 | 231 |
| MS.gene49538.t1 | MTR_7g026180 | 81.513 | 119 | 22 | 0 | 78 | 196 | 23 | 141 | 6.04e-62 | 209 |
| MS.gene49538.t1 | MTR_7g026180 | 46.544 | 217 | 85 | 4 | 401 | 615 | 143 | 330 | 1.86e-44 | 162 |
| MS.gene49538.t1 | MTR_3g081170 | 30.769 | 442 | 281 | 7 | 12 | 430 | 29 | 468 | 1.10e-60 | 217 |
| MS.gene49538.t1 | MTR_4g115780 | 33.012 | 518 | 303 | 16 | 9 | 495 | 140 | 644 | 6.45e-59 | 209 |
| MS.gene49538.t1 | MTR_5g090110 | 30.153 | 524 | 312 | 14 | 9 | 508 | 28 | 521 | 2.85e-57 | 201 |
| MS.gene49538.t1 | MTR_4g107920 | 29.783 | 507 | 314 | 16 | 10 | 495 | 21 | 506 | 1.93e-51 | 186 |
| MS.gene49538.t1 | MTR_1g068900 | 67.969 | 128 | 41 | 0 | 440 | 567 | 38 | 165 | 6.75e-51 | 173 |
| MS.gene49538.t1 | MTR_2g040355 | 32.553 | 427 | 129 | 11 | 189 | 614 | 2 | 270 | 5.39e-49 | 173 |
| MS.gene49538.t1 | MTR_5g005870 | 37.884 | 293 | 165 | 8 | 300 | 586 | 70 | 351 | 2.65e-48 | 174 |
| MS.gene49538.t1 | MTR_6g033910 | 42.358 | 229 | 69 | 4 | 74 | 300 | 19 | 186 | 9.35e-48 | 166 |
| MS.gene49538.t1 | MTR_4g027235 | 82.667 | 75 | 13 | 0 | 1 | 75 | 1 | 75 | 9.89e-41 | 142 |
| MS.gene49538.t1 | MTR_4g027085 | 82.667 | 75 | 13 | 0 | 1 | 75 | 1 | 75 | 9.89e-41 | 142 |
| MS.gene49538.t1 | MTR_7g026095 | 74.444 | 90 | 23 | 0 | 481 | 570 | 256 | 345 | 2.06e-38 | 145 |
| MS.gene49538.t1 | MTR_7g026095 | 57.778 | 90 | 22 | 2 | 86 | 175 | 187 | 260 | 1.32e-22 | 100 |
| MS.gene49538.t1 | MTR_5g005890 | 35.398 | 226 | 95 | 4 | 74 | 298 | 5 | 180 | 1.46e-37 | 138 |
| MS.gene49538.t1 | MTR_7g026190 | 69.388 | 98 | 21 | 2 | 284 | 381 | 5 | 93 | 1.01e-34 | 131 |
| MS.gene49538.t1 | MTR_7g026190 | 45.205 | 146 | 71 | 5 | 471 | 614 | 70 | 208 | 5.72e-24 | 100 |
| MS.gene49538.t1 | MTR_6g033805 | 69.863 | 73 | 20 | 1 | 1 | 73 | 1 | 71 | 5.46e-28 | 107 |
| MS.gene49538.t1 | MTR_2g017710 | 35.271 | 258 | 80 | 8 | 225 | 478 | 17 | 191 | 1.68e-27 | 112 |
| MS.gene49538.t1 | MTR_4g115860 | 42.391 | 92 | 51 | 2 | 397 | 486 | 29 | 120 | 1.10e-15 | 74.3 |
| MS.gene49538.t1 | MTR_7g021430 | 48.571 | 70 | 36 | 0 | 215 | 284 | 1 | 70 | 4.01e-15 | 74.7 |
| MS.gene49538.t1 | MTR_3g114360 | 52.809 | 89 | 27 | 1 | 450 | 538 | 192 | 265 | 7.57e-14 | 72.4 |
| MS.gene49538.t1 | MTR_3g114370 | 37.410 | 139 | 45 | 2 | 473 | 609 | 5 | 103 | 2.74e-11 | 61.2 |
| MS.gene49538.t1 | MTR_6g033995 | 45.455 | 66 | 30 | 1 | 1 | 66 | 1 | 60 | 5.56e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49538.t1 | AT3G12580 | 65.316 | 617 | 209 | 4 | 1 | 614 | 1 | 615 | 0.0 | 827 |
| MS.gene49538.t1 | AT5G02500 | 64.506 | 617 | 214 | 4 | 1 | 614 | 1 | 615 | 0.0 | 819 |
| MS.gene49538.t1 | AT5G02490 | 64.019 | 617 | 217 | 4 | 1 | 614 | 1 | 615 | 0.0 | 810 |
| MS.gene49538.t1 | AT3G09440 | 64.182 | 617 | 216 | 4 | 1 | 614 | 1 | 615 | 0.0 | 803 |
| MS.gene49538.t1 | AT3G09440 | 64.182 | 617 | 216 | 4 | 1 | 614 | 1 | 615 | 0.0 | 803 |
| MS.gene49538.t1 | AT3G09440 | 64.182 | 617 | 216 | 4 | 1 | 614 | 1 | 615 | 0.0 | 803 |
| MS.gene49538.t1 | AT3G09440 | 64.182 | 617 | 216 | 4 | 1 | 614 | 1 | 615 | 0.0 | 803 |
| MS.gene49538.t1 | AT1G56410 | 64.506 | 617 | 212 | 5 | 1 | 614 | 1 | 613 | 0.0 | 800 |
| MS.gene49538.t1 | AT1G16030 | 62.075 | 617 | 228 | 5 | 1 | 614 | 1 | 614 | 0.0 | 788 |
| MS.gene49538.t1 | AT5G28540 | 54.337 | 611 | 268 | 8 | 7 | 612 | 35 | 639 | 0.0 | 643 |
| MS.gene49538.t1 | AT5G42020 | 54.337 | 611 | 268 | 8 | 7 | 612 | 35 | 639 | 0.0 | 642 |
| MS.gene49538.t1 | AT5G42020 | 54.337 | 611 | 268 | 8 | 7 | 612 | 40 | 644 | 0.0 | 641 |
| MS.gene49538.t1 | AT1G09080 | 53.746 | 614 | 273 | 8 | 7 | 616 | 50 | 656 | 0.0 | 616 |
| MS.gene49538.t1 | AT1G09080 | 53.746 | 614 | 273 | 8 | 7 | 616 | 40 | 646 | 0.0 | 616 |
| MS.gene49538.t1 | AT5G02500 | 73.779 | 389 | 100 | 1 | 1 | 389 | 1 | 387 | 0.0 | 614 |
| MS.gene49538.t1 | AT5G02500 | 36.000 | 100 | 64 | 0 | 515 | 614 | 386 | 485 | 7.28e-12 | 68.6 |
| MS.gene49538.t1 | AT5G42020 | 49.836 | 610 | 242 | 9 | 7 | 612 | 35 | 584 | 0.0 | 556 |
| MS.gene49538.t1 | AT5G09590 | 46.447 | 577 | 284 | 14 | 10 | 579 | 60 | 618 | 3.28e-155 | 462 |
| MS.gene49538.t1 | AT4G37910 | 45.172 | 580 | 289 | 13 | 10 | 580 | 55 | 614 | 1.33e-149 | 448 |
| MS.gene49538.t1 | AT4G37910 | 45.172 | 580 | 289 | 13 | 10 | 580 | 55 | 614 | 1.33e-149 | 448 |
| MS.gene49538.t1 | AT4G24280 | 45.536 | 560 | 283 | 11 | 8 | 560 | 79 | 623 | 1.44e-148 | 446 |
| MS.gene49538.t1 | AT5G49910 | 45.714 | 560 | 282 | 11 | 8 | 560 | 79 | 623 | 1.98e-148 | 446 |
| MS.gene49538.t1 | AT1G79930 | 31.111 | 540 | 323 | 12 | 10 | 523 | 4 | 520 | 9.41e-76 | 257 |
| MS.gene49538.t1 | AT1G79930 | 31.111 | 540 | 323 | 12 | 10 | 523 | 4 | 520 | 1.81e-75 | 257 |
| MS.gene49538.t1 | AT1G79920 | 31.111 | 540 | 323 | 12 | 10 | 523 | 4 | 520 | 1.87e-75 | 255 |
| MS.gene49538.t1 | AT1G79920 | 31.111 | 540 | 323 | 12 | 10 | 523 | 4 | 520 | 2.11e-75 | 255 |
| MS.gene49538.t1 | AT1G79920 | 31.111 | 540 | 323 | 12 | 10 | 523 | 4 | 520 | 2.11e-75 | 255 |
| MS.gene49538.t1 | AT1G79920 | 31.111 | 540 | 323 | 12 | 10 | 523 | 4 | 520 | 2.11e-75 | 255 |
| MS.gene49538.t1 | AT1G11660 | 31.548 | 504 | 312 | 11 | 10 | 495 | 4 | 492 | 5.10e-74 | 252 |
| MS.gene49538.t1 | AT1G11660 | 31.548 | 504 | 312 | 11 | 10 | 495 | 4 | 492 | 5.10e-74 | 252 |
| MS.gene49538.t1 | AT1G11660 | 31.548 | 504 | 312 | 11 | 10 | 495 | 4 | 492 | 5.10e-74 | 252 |
| MS.gene49538.t1 | AT2G32120 | 34.047 | 514 | 304 | 13 | 9 | 506 | 30 | 524 | 2.09e-71 | 241 |
| MS.gene49538.t1 | AT2G32120 | 34.047 | 514 | 304 | 13 | 9 | 506 | 30 | 524 | 2.09e-71 | 241 |
| MS.gene49538.t1 | AT1G11660 | 31.906 | 467 | 287 | 10 | 47 | 495 | 2 | 455 | 8.21e-68 | 234 |
| MS.gene49538.t1 | AT4G16660 | 29.158 | 487 | 318 | 7 | 6 | 469 | 47 | 529 | 1.42e-60 | 217 |
| MS.gene49538.t1 | AT4G16660 | 29.158 | 487 | 318 | 7 | 6 | 469 | 23 | 505 | 1.92e-60 | 216 |
Find 115 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCCATTCAAGGTCATTTC+TGG | 0.133232 | 7.4:+87721671 | MS.gene49538:CDS |
| TGCAATAGTTGTTGTACTTT+TGG | 0.196868 | 7.4:-87722442 | None:intergenic |
| CACGGTAATTCTCAGCTTCT+TGG | 0.258316 | 7.4:-87722960 | None:intergenic |
| TTAGATGCAAAGAGGTTAAT+TGG | 0.272649 | 7.4:+87721605 | MS.gene49538:intron |
| TGATTATCCGCATAATATTA+AGG | 0.281715 | 7.4:-87721904 | None:intergenic |
| TGCTTTACTATCAATGAAAA+TGG | 0.291437 | 7.4:+87722832 | MS.gene49538:CDS |
| CCGGATGAGGCTGTTGCTTA+TGG | 0.312351 | 7.4:+87722505 | MS.gene49538:CDS |
| AGTATGCTCCAACTCATTAT+AGG | 0.328633 | 7.4:+87723204 | MS.gene49538:CDS |
| ACATCTTGCAGCACCAAGTT+TGG | 0.333406 | 7.4:-87722574 | None:intergenic |
| TGCTGAAGAAATATCATCTA+TGG | 0.341895 | 7.4:+87721751 | MS.gene49538:CDS |
| TTGTCTCGCTGATGCCAAAA+TGG | 0.348246 | 7.4:+87722369 | MS.gene49538:CDS |
| GATGTTGCTCCTTTGTCTCT+TGG | 0.351484 | 7.4:+87722592 | MS.gene49538:CDS |
| CGATAAGGTCTTTCAAGTTA+AGG | 0.355272 | 7.4:+87722051 | MS.gene49538:CDS |
| GAATGACAAACCCTTGATTT+CGG | 0.363835 | 7.4:+87721697 | MS.gene49538:CDS |
| ATAGATGCTGGTGCTATTGC+TGG | 0.363983 | 7.4:+87721881 | MS.gene49538:CDS |
| TTCATCTTTGACTTGGGTGG+TGG | 0.368513 | 7.4:+87721998 | MS.gene49538:CDS |
| CTTCGATGGTGGCTGAAGTT+TGG | 0.371612 | 7.4:-87722711 | None:intergenic |
| GAACATCTATTTCACTCTGT+TGG | 0.372500 | 7.4:-87723155 | None:intergenic |
| GCATACTCTCAAGCTCCTTC+AGG | 0.379512 | 7.4:-87723188 | None:intergenic |
| GAGGTAGATTCTTTATTTCA+AGG | 0.387226 | 7.4:+87722259 | MS.gene49538:CDS |
| CATATTGATTTCCTCAAACT+TGG | 0.390481 | 7.4:-87722311 | None:intergenic |
| ATAGTAAAGCATACCTCTAA+AGG | 0.391561 | 7.4:-87722820 | None:intergenic |
| AGACCTTATCGTTAATTGTA+AGG | 0.410835 | 7.4:-87722039 | None:intergenic |
| CGCCGTTCTCAACCTCCTTA+AGG | 0.413742 | 7.4:-87722188 | None:intergenic |
| AACATCTATTTCACTCTGTT+GGG | 0.414811 | 7.4:-87723154 | None:intergenic |
| AAAAGTACAACAACTATTGC+AGG | 0.418027 | 7.4:+87722444 | MS.gene49538:CDS |
| GGGGAGAGGACATTGATAAT+AGG | 0.425160 | 7.4:+87722098 | MS.gene49538:CDS |
| CCATAAGCAACAGCCTCATC+CGG | 0.426449 | 7.4:-87722505 | None:intergenic |
| CGTGCAGTGGGAATCGATCT+TGG | 0.426595 | 7.4:+87721243 | MS.gene49538:CDS |
| AGCCACCATCGAAGTTTATG+AGG | 0.432517 | 7.4:+87722720 | MS.gene49538:CDS |
| TCCTCGCGGTCACCCTTTAG+AGG | 0.432662 | 7.4:+87722807 | MS.gene49538:CDS |
| CTTGTACTTAACCGAAATCA+AGG | 0.441866 | 7.4:-87721708 | None:intergenic |
| TATGATGCTCTGGCCATTCA+AGG | 0.452525 | 7.4:+87721661 | MS.gene49538:CDS |
| TTTCACTGATGATCAAAGAT+TGG | 0.454039 | 7.4:+87721365 | MS.gene49538:CDS |
| CTTGATTTCGGTTAAGTACA+AGG | 0.455898 | 7.4:+87721709 | MS.gene49538:CDS |
| CAAGTTTGAGGAAATCAATA+TGG | 0.456479 | 7.4:+87722312 | MS.gene49538:CDS |
| TCATCTTTGACTTGGGTGGT+GGG | 0.462409 | 7.4:+87721999 | MS.gene49538:CDS |
| CTGATGATCAAAGATTGGTT+GGG | 0.464698 | 7.4:+87721370 | MS.gene49538:CDS |
| CAAGCTGCTTTGTTGAGTGA+AGG | 0.468563 | 7.4:+87722538 | MS.gene49538:CDS |
| CCTCCTTACAATTAACGATA+AGG | 0.474695 | 7.4:+87722036 | MS.gene49538:CDS |
| AATCACTCGTGCCAAGTTTG+AGG | 0.476109 | 7.4:+87722300 | MS.gene49538:CDS |
| ACTGATGATCAAAGATTGGT+TGG | 0.477750 | 7.4:+87721369 | MS.gene49538:CDS |
| CTGCCGGAAACACTCATCTC+GGG | 0.486017 | 7.4:+87722077 | MS.gene49538:CDS |
| ATTCCTATCAAGAAAACAAA+TGG | 0.487442 | 7.4:+87722667 | MS.gene49538:CDS |
| ATGCAAAGAGGTTAATTGGT+AGG | 0.490498 | 7.4:+87721609 | MS.gene49538:CDS |
| CGCTGTCATCACCACCATTG+AGG | 0.494719 | 7.4:+87722240 | MS.gene49538:CDS |
| ATACATGATGTCGTCCTTGT+TGG | 0.495233 | 7.4:+87722403 | MS.gene49538:CDS |
| ACTCCAGAAATGACCTTGAA+TGG | 0.496023 | 7.4:-87721674 | None:intergenic |
| ATAGGAATGCTAGTGTTCCT+AGG | 0.496798 | 7.4:-87722652 | None:intergenic |
| GTGAGAACTCAAGAGCCTTA+AGG | 0.498696 | 7.4:+87722173 | MS.gene49538:CDS |
| TAGTAAAGCATACCTCTAAA+GGG | 0.502926 | 7.4:-87722819 | None:intergenic |
| TTCGGTTAAGTACAAGGGAC+AGG | 0.503303 | 7.4:+87721715 | MS.gene49538:CDS |
| ATCTAATGCATTCATTACAT+TGG | 0.506285 | 7.4:-87723010 | None:intergenic |
| TTCAAAACGATATGATGCTC+TGG | 0.506462 | 7.4:+87721651 | MS.gene49538:CDS |
| AAATAAAGAATCTACCTCAA+TGG | 0.513375 | 7.4:-87722254 | None:intergenic |
| CTCAACAGTTTCCAAACACT+CGG | 0.517122 | 7.4:-87722344 | None:intergenic |
| CAGATTTGCCTATAATGAGT+TGG | 0.517915 | 7.4:-87723212 | None:intergenic |
| TCATGAGTGTGGTAATTCCT+AGG | 0.518946 | 7.4:+87722635 | MS.gene49538:CDS |
| GTAACAACTGCATTCTTGAC+AGG | 0.522397 | 7.4:-87721818 | None:intergenic |
| ATTAGATTATTGTGTTTACA+AGG | 0.523212 | 7.4:+87723026 | MS.gene49538:CDS |
| ACTGCCGGAAACACTCATCT+CGG | 0.525372 | 7.4:+87722076 | MS.gene49538:CDS |
| ATGATATTTCTTCAGCACAT+AGG | 0.525970 | 7.4:-87721745 | None:intergenic |
| ATCATTGAAATAAGCAGGTA+CGG | 0.536914 | 7.4:-87721840 | None:intergenic |
| CGGAAAGCCACAATAGATGC+TGG | 0.544288 | 7.4:+87721869 | MS.gene49538:CDS |
| TAAGAGTATCAACCCGGATG+AGG | 0.553089 | 7.4:+87722492 | MS.gene49538:CDS |
| ACTGCTGCAGCTATTGCGTA+TGG | 0.555701 | 7.4:+87721935 | MS.gene49538:CDS |
| TGAGCATCATTGAAATAAGC+AGG | 0.555903 | 7.4:-87721845 | None:intergenic |
| CTTATCGTTAATTGTAAGGA+GGG | 0.556954 | 7.4:-87722035 | None:intergenic |
| CATGATGTCGTCCTTGTTGG+TGG | 0.557781 | 7.4:+87722406 | MS.gene49538:CDS |
| GGGTGACCGCGAGGAGCACG+TGG | 0.564006 | 7.4:-87722799 | None:intergenic |
| AATTTCATTCATACTACCAG+TGG | 0.564448 | 7.4:-87722884 | None:intergenic |
| TTTCAAGTTAAGGCTACTGC+CGG | 0.565897 | 7.4:+87722061 | MS.gene49538:CDS |
| TGCAGCTATTGCGTATGGAC+TGG | 0.573148 | 7.4:+87721940 | MS.gene49538:CDS |
| CATAAGCAACAGCCTCATCC+GGG | 0.578274 | 7.4:-87722504 | None:intergenic |
| TTGTACTTAACCGAAATCAA+GGG | 0.581463 | 7.4:-87721707 | None:intergenic |
| AAGTATGAAGGACGTGCAGT+GGG | 0.586872 | 7.4:+87721231 | MS.gene49538:CDS |
| AAAGTATGAAGGACGTGCAG+TGG | 0.587167 | 7.4:+87721230 | MS.gene49538:CDS |
| AGAGGACATTGATAATAGGA+TGG | 0.589461 | 7.4:+87722102 | MS.gene49538:CDS |
| TCAGTGAAAGCAACACAAGA+AGG | 0.593151 | 7.4:-87721351 | None:intergenic |
| CCTTATCGTTAATTGTAAGG+AGG | 0.593274 | 7.4:-87722036 | None:intergenic |
| GCTACTGACAACAATCTGCT+TGG | 0.593670 | 7.4:+87722757 | MS.gene49538:CDS |
| GAAAACAAATGGTTATGCAA+CGG | 0.593939 | 7.4:+87722678 | MS.gene49538:CDS |
| AGCCTTAAGGAGGTTGAGAA+CGG | 0.603861 | 7.4:+87722186 | MS.gene49538:CDS |
| CTCACCCTCATAAACTTCGA+TGG | 0.605720 | 7.4:-87722725 | None:intergenic |
| TTGCTGGCCTTAATATTATG+CGG | 0.610596 | 7.4:+87721897 | MS.gene49538:CDS |
| AATAGCACCAGCATCTATTG+TGG | 0.610874 | 7.4:-87721876 | None:intergenic |
| GCCACCATCGAAGTTTATGA+GGG | 0.613772 | 7.4:+87722721 | MS.gene49538:CDS |
| TGCCGGAAACACTCATCTCG+GGG | 0.616852 | 7.4:+87722078 | MS.gene49538:CDS |
| TTTGAGATACCAAGAGACAA+AGG | 0.618740 | 7.4:-87722601 | None:intergenic |
| TGTTCTTGAAAATCACCTGA+AGG | 0.620051 | 7.4:+87723173 | MS.gene49538:CDS |
| GATGGTGAACTACTTTGCAC+AGG | 0.621581 | 7.4:+87722120 | MS.gene49538:CDS |
| TGATGATCAAAGATTGGTTG+GGG | 0.623126 | 7.4:+87721371 | MS.gene49538:CDS |
| TTGATTTCGGTTAAGTACAA+GGG | 0.625025 | 7.4:+87721710 | MS.gene49538:CDS |
| GGTACTATCAAGTAAACTTG+TGG | 0.625691 | 7.4:-87723133 | None:intergenic |
| AGCTGAGAATTACCGTGTCG+AGG | 0.626673 | 7.4:+87722966 | MS.gene49538:CDS |
| GAGATTATTCACAATGACCA+AGG | 0.627593 | 7.4:+87721315 | MS.gene49538:CDS |
| TAAAGAATCTACCTCAATGG+TGG | 0.633251 | 7.4:-87722251 | None:intergenic |
| GAAAGCAACACAAGAAGGTG+TGG | 0.633341 | 7.4:-87721346 | None:intergenic |
| TCTCTTGGTATCTCAAAACA+AGG | 0.635360 | 7.4:+87722607 | MS.gene49538:CDS |
| ACAAGGTGACATCATGAGTG+TGG | 0.648276 | 7.4:+87722624 | MS.gene49538:CDS |
| GATCAATTCTGCAATCACAA+AGG | 0.649185 | 7.4:+87723110 | MS.gene49538:CDS |
| AGAACTCAAGAGCCTTAAGG+AGG | 0.650848 | 7.4:+87722176 | MS.gene49538:CDS |
| GGACAAGAGAACTAATTGTG+TGG | 0.654792 | 7.4:+87721961 | MS.gene49538:CDS |
| AAAGATGCGCGAGACTGCAG+AGG | 0.655131 | 7.4:+87721781 | MS.gene49538:CDS |
| TACGCAATAGCTGCAGCAGT+AGG | 0.659113 | 7.4:-87721932 | None:intergenic |
| ACCCTCATAAACTTCGATGG+TGG | 0.659298 | 7.4:-87722722 | None:intergenic |
| ACCTCTAAAGGGTGACCGCG+AGG | 0.662084 | 7.4:-87722808 | None:intergenic |
| TCTGTCCCACGTGCTCCTCG+CGG | 0.664976 | 7.4:+87722793 | MS.gene49538:CDS |
| CAAGAGAACTAATTGTGTGG+AGG | 0.667224 | 7.4:+87721964 | MS.gene49538:CDS |
| TTCTAGACGAGCCACCAACA+AGG | 0.672363 | 7.4:-87722417 | None:intergenic |
| CGTATTCGTGCGTTGCTGTG+TGG | 0.676152 | 7.4:+87721271 | MS.gene49538:CDS |
| TCTGTGTAAGAGTATCAACC+CGG | 0.678792 | 7.4:+87722486 | MS.gene49538:CDS |
| CTTATTTCAATGATGCTCAG+CGG | 0.693840 | 7.4:+87721849 | MS.gene49538:CDS |
| GCCGGAAACACTCATCTCGG+GGG | 0.729190 | 7.4:+87722079 | MS.gene49538:CDS |
| GGTGACCGCGAGGAGCACGT+GGG | 0.750315 | 7.4:-87722798 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTCATTTCTTTATTGT+TGG | + | chr7.4:87721460-87721479 | MS.gene49538:intron | 15.0% |
| !! | AGTAAATTAAATTCTGATCA+GGG | - | chr7.4:87721570-87721589 | None:intergenic | 20.0% |
| !! | ATTAGATTATTGTGTTTACA+AGG | + | chr7.4:87723026-87723045 | MS.gene49538:CDS | 20.0% |
| !! | TAGTAAATTAAATTCTGATC+AGG | - | chr7.4:87721571-87721590 | None:intergenic | 20.0% |
| !!! | GATCATTTTTGTAATTTCTT+GGG | - | chr7.4:87722941-87722960 | None:intergenic | 20.0% |
| ! | AAATAAAGAATCTACCTCAA+TGG | - | chr7.4:87722257-87722276 | None:intergenic | 25.0% |
| ! | ATCTAATGCATTCATTACAT+TGG | - | chr7.4:87723013-87723032 | None:intergenic | 25.0% |
| ! | ATTCCTATCAAGAAAACAAA+TGG | + | chr7.4:87722667-87722686 | MS.gene49538:CDS | 25.0% |
| ! | TGATTATCCGCATAATATTA+AGG | - | chr7.4:87721907-87721926 | None:intergenic | 25.0% |
| ! | TGCTTTACTATCAATGAAAA+TGG | + | chr7.4:87722832-87722851 | MS.gene49538:CDS | 25.0% |
| !! | CTTTAAAAATGTTCCAAACT+TGG | + | chr7.4:87722561-87722580 | MS.gene49538:CDS | 25.0% |
| !! | TAGTATTTTCATCTTTGACT+TGG | + | chr7.4:87721991-87722010 | MS.gene49538:CDS | 25.0% |
| !!! | AGTATTTTCATCTTTGACTT+GGG | + | chr7.4:87721992-87722011 | MS.gene49538:CDS | 25.0% |
| !!! | GGATCATTTTTGTAATTTCT+TGG | - | chr7.4:87722942-87722961 | None:intergenic | 25.0% |
| !!! | TAACCATTTGTTTTCTTGAT+AGG | - | chr7.4:87722673-87722692 | None:intergenic | 25.0% |
| !!! | TATAGCACTTTTTTCCATTT+TGG | - | chr7.4:87722386-87722405 | None:intergenic | 25.0% |
| !!! | TTATTTTGTTAGATGCAAAG+AGG | + | chr7.4:87721597-87721616 | MS.gene49538:intron | 25.0% |
| AACATCTATTTCACTCTGTT+GGG | - | chr7.4:87723157-87723176 | None:intergenic | 30.0% | |
| AATTTCATTCATACTACCAG+TGG | - | chr7.4:87722887-87722906 | None:intergenic | 30.0% | |
| AGACCTTATCGTTAATTGTA+AGG | - | chr7.4:87722042-87722061 | None:intergenic | 30.0% | |
| ATAGTAAAGCATACCTCTAA+AGG | - | chr7.4:87722823-87722842 | None:intergenic | 30.0% | |
| ATCATTGAAATAAGCAGGTA+CGG | - | chr7.4:87721843-87721862 | None:intergenic | 30.0% | |
| ATGATATTTCTTCAGCACAT+AGG | - | chr7.4:87721748-87721767 | None:intergenic | 30.0% | |
| CAAGTTTGAGGAAATCAATA+TGG | + | chr7.4:87722312-87722331 | MS.gene49538:CDS | 30.0% | |
| CTTATCGTTAATTGTAAGGA+GGG | - | chr7.4:87722038-87722057 | None:intergenic | 30.0% | |
| GAAAACAAATGGTTATGCAA+CGG | + | chr7.4:87722678-87722697 | MS.gene49538:CDS | 30.0% | |
| GGAGTTTAAGAAGAAAAACA+AGG | + | chr7.4:87722141-87722160 | MS.gene49538:CDS | 30.0% | |
| TAGTAAAGCATACCTCTAAA+GGG | - | chr7.4:87722822-87722841 | None:intergenic | 30.0% | |
| TCGAGGATGAAAAATTTCTA+AGG | + | chr7.4:87722983-87723002 | MS.gene49538:CDS | 30.0% | |
| TGCTGAAGAAATATCATCTA+TGG | + | chr7.4:87721751-87721770 | MS.gene49538:CDS | 30.0% | |
| TTAGATGCAAAGAGGTTAAT+TGG | + | chr7.4:87721605-87721624 | MS.gene49538:intron | 30.0% | |
| TTGATTTCGGTTAAGTACAA+GGG | + | chr7.4:87721710-87721729 | MS.gene49538:CDS | 30.0% | |
| TTGTACTTAACCGAAATCAA+GGG | - | chr7.4:87721710-87721729 | None:intergenic | 30.0% | |
| TTTCACTGATGATCAAAGAT+TGG | + | chr7.4:87721365-87721384 | MS.gene49538:CDS | 30.0% | |
| ! | AAAAGTACAACAACTATTGC+AGG | + | chr7.4:87722444-87722463 | MS.gene49538:CDS | 30.0% |
| ! | GAGGTAGATTCTTTATTTCA+AGG | + | chr7.4:87722259-87722278 | MS.gene49538:CDS | 30.0% |
| ! | GGATGAAAAATTTCTAAGGA+AGG | + | chr7.4:87722987-87723006 | MS.gene49538:CDS | 30.0% |
| ! | TACCAAAAACAGTGTTTTCA+GGG | - | chr7.4:87721425-87721444 | None:intergenic | 30.0% |
| ! | TGCAATAGTTGTTGTACTTT+TGG | - | chr7.4:87722445-87722464 | None:intergenic | 30.0% |
| ! | TTACCAAAAACAGTGTTTTC+AGG | - | chr7.4:87721426-87721445 | None:intergenic | 30.0% |
| !! | CATATTGATTTCCTCAAACT+TGG | - | chr7.4:87722314-87722333 | None:intergenic | 30.0% |
| ACTGATGATCAAAGATTGGT+TGG | + | chr7.4:87721369-87721388 | MS.gene49538:CDS | 35.0% | |
| AGTATGCTCCAACTCATTAT+AGG | + | chr7.4:87723204-87723223 | MS.gene49538:CDS | 35.0% | |
| ATGCAAAGAGGTTAATTGGT+AGG | + | chr7.4:87721609-87721628 | MS.gene49538:CDS | 35.0% | |
| CAGATTTGCCTATAATGAGT+TGG | - | chr7.4:87723215-87723234 | None:intergenic | 35.0% | |
| CCTCCTTACAATTAACGATA+AGG | + | chr7.4:87722036-87722055 | MS.gene49538:CDS | 35.0% | |
| CCTTATCGTTAATTGTAAGG+AGG | - | chr7.4:87722039-87722058 | None:intergenic | 35.0% | |
| CTTATTTCAATGATGCTCAG+CGG | + | chr7.4:87721849-87721868 | MS.gene49538:CDS | 35.0% | |
| CTTGATTTCGGTTAAGTACA+AGG | + | chr7.4:87721709-87721728 | MS.gene49538:CDS | 35.0% | |
| CTTGTACTTAACCGAAATCA+AGG | - | chr7.4:87721711-87721730 | None:intergenic | 35.0% | |
| GAACATCTATTTCACTCTGT+TGG | - | chr7.4:87723158-87723177 | None:intergenic | 35.0% | |
| GAATGACAAACCCTTGATTT+CGG | + | chr7.4:87721697-87721716 | MS.gene49538:CDS | 35.0% | |
| GAGATTATTCACAATGACCA+AGG | + | chr7.4:87721315-87721334 | MS.gene49538:CDS | 35.0% | |
| GATCAATTCTGCAATCACAA+AGG | + | chr7.4:87723110-87723129 | MS.gene49538:CDS | 35.0% | |
| GGTACTATCAAGTAAACTTG+TGG | - | chr7.4:87723136-87723155 | None:intergenic | 35.0% | |
| TAAAGAATCTACCTCAATGG+TGG | - | chr7.4:87722254-87722273 | None:intergenic | 35.0% | |
| TCTCTTGGTATCTCAAAACA+AGG | + | chr7.4:87722607-87722626 | MS.gene49538:CDS | 35.0% | |
| TCTGCAAATGAAAAATCCAC+TGG | + | chr7.4:87722868-87722887 | MS.gene49538:CDS | 35.0% | |
| TGAGCATCATTGAAATAAGC+AGG | - | chr7.4:87721848-87721867 | None:intergenic | 35.0% | |
| TGTTCTTGAAAATCACCTGA+AGG | + | chr7.4:87723173-87723192 | MS.gene49538:CDS | 35.0% | |
| TTCAAAACGATATGATGCTC+TGG | + | chr7.4:87721651-87721670 | MS.gene49538:CDS | 35.0% | |
| ! | AACCCTGAAAACACTGTTTT+TGG | + | chr7.4:87721420-87721439 | MS.gene49538:CDS | 35.0% |
| ! | AGAGGACATTGATAATAGGA+TGG | + | chr7.4:87722102-87722121 | MS.gene49538:CDS | 35.0% |
| ! | CTGATGATCAAAGATTGGTT+GGG | + | chr7.4:87721370-87721389 | MS.gene49538:CDS | 35.0% |
| ! | GAAATTTTTCATCCTCGACA+CGG | - | chr7.4:87722981-87723000 | None:intergenic | 35.0% |
| ! | TATTGCAGGAATTTTTCGCA+GGG | + | chr7.4:87722458-87722477 | MS.gene49538:CDS | 35.0% |
| ! | TGATGATCAAAGATTGGTTG+GGG | + | chr7.4:87721371-87721390 | MS.gene49538:CDS | 35.0% |
| ! | TTTGAGATACCAAGAGACAA+AGG | - | chr7.4:87722604-87722623 | None:intergenic | 35.0% |
| !! | CGATAAGGTCTTTCAAGTTA+AGG | + | chr7.4:87722051-87722070 | MS.gene49538:CDS | 35.0% |
| !! | TTGCTGGCCTTAATATTATG+CGG | + | chr7.4:87721897-87721916 | MS.gene49538:CDS | 35.0% |
| !!! | ATTTTCATCTTTGACTTGGG+TGG | + | chr7.4:87721995-87722014 | MS.gene49538:CDS | 35.0% |
| AATAGCACCAGCATCTATTG+TGG | - | chr7.4:87721879-87721898 | None:intergenic | 40.0% | |
| ACTCCAGAAATGACCTTGAA+TGG | - | chr7.4:87721677-87721696 | None:intergenic | 40.0% | |
| ATACATGATGTCGTCCTTGT+TGG | + | chr7.4:87722403-87722422 | MS.gene49538:CDS | 40.0% | |
| ATAGGAATGCTAGTGTTCCT+AGG | - | chr7.4:87722655-87722674 | None:intergenic | 40.0% | |
| CAAGAGAACTAATTGTGTGG+AGG | + | chr7.4:87721964-87721983 | MS.gene49538:CDS | 40.0% | |
| CTCAACAGTTTCCAAACACT+CGG | - | chr7.4:87722347-87722366 | None:intergenic | 40.0% | |
| GGACAAGAGAACTAATTGTG+TGG | + | chr7.4:87721961-87721980 | MS.gene49538:CDS | 40.0% | |
| GTAACAACTGCATTCTTGAC+AGG | - | chr7.4:87721821-87721840 | None:intergenic | 40.0% | |
| TCAGTGAAAGCAACACAAGA+AGG | - | chr7.4:87721354-87721373 | None:intergenic | 40.0% | |
| TCATGAGTGTGGTAATTCCT+AGG | + | chr7.4:87722635-87722654 | MS.gene49538:CDS | 40.0% | |
| ! | ATACGATGTGTTGACACTGT+TGG | + | chr7.4:87721526-87721545 | MS.gene49538:intron | 40.0% |
| ! | CTATTGCAGGAATTTTTCGC+AGG | + | chr7.4:87722457-87722476 | MS.gene49538:CDS | 40.0% |
| !! | AACAGTGTTTTCAGGGTTTG+TGG | - | chr7.4:87721418-87721437 | None:intergenic | 40.0% |
| !! | TCTGTGTAAGAGTATCAACC+CGG | + | chr7.4:87722486-87722505 | MS.gene49538:CDS | 40.0% |
| !! | TTTCAAGTTAAGGCTACTGC+CGG | + | chr7.4:87722061-87722080 | MS.gene49538:CDS | 40.0% |
| AAAGTATGAAGGACGTGCAG+TGG | + | chr7.4:87721230-87721249 | MS.gene49538:CDS | 45.0% | |
| AAGTATGAAGGACGTGCAGT+GGG | + | chr7.4:87721231-87721250 | MS.gene49538:CDS | 45.0% | |
| AATCACTCGTGCCAAGTTTG+AGG | + | chr7.4:87722300-87722319 | MS.gene49538:CDS | 45.0% | |
| ACAAGGTGACATCATGAGTG+TGG | + | chr7.4:87722624-87722643 | MS.gene49538:CDS | 45.0% | |
| ACATCTTGCAGCACCAAGTT+TGG | - | chr7.4:87722577-87722596 | None:intergenic | 45.0% | |
| ACCCTCATAAACTTCGATGG+TGG | - | chr7.4:87722725-87722744 | None:intergenic | 45.0% | |
| AGAACTCAAGAGCCTTAAGG+AGG | + | chr7.4:87722176-87722195 | MS.gene49538:CDS | 45.0% | |
| AGCCACCATCGAAGTTTATG+AGG | + | chr7.4:87722720-87722739 | MS.gene49538:CDS | 45.0% | |
| AGCCTTAAGGAGGTTGAGAA+CGG | + | chr7.4:87722186-87722205 | MS.gene49538:CDS | 45.0% | |
| CACGGTAATTCTCAGCTTCT+TGG | - | chr7.4:87722963-87722982 | None:intergenic | 45.0% | |
| CTCACCCTCATAAACTTCGA+TGG | - | chr7.4:87722728-87722747 | None:intergenic | 45.0% | |
| GAAAGCAACACAAGAAGGTG+TGG | - | chr7.4:87721349-87721368 | None:intergenic | 45.0% | |
| GATGGTGAACTACTTTGCAC+AGG | + | chr7.4:87722120-87722139 | MS.gene49538:CDS | 45.0% | |
| GATGTTGCTCCTTTGTCTCT+TGG | + | chr7.4:87722592-87722611 | MS.gene49538:CDS | 45.0% | |
| GCCACCATCGAAGTTTATGA+GGG | + | chr7.4:87722721-87722740 | MS.gene49538:CDS | 45.0% | |
| GCTACTGACAACAATCTGCT+TGG | + | chr7.4:87722757-87722776 | MS.gene49538:CDS | 45.0% | |
| GTGAGAACTCAAGAGCCTTA+AGG | + | chr7.4:87722173-87722192 | MS.gene49538:CDS | 45.0% | |
| TATGATGCTCTGGCCATTCA+AGG | + | chr7.4:87721661-87721680 | MS.gene49538:CDS | 45.0% | |
| TGGCCATTCAAGGTCATTTC+TGG | + | chr7.4:87721671-87721690 | MS.gene49538:CDS | 45.0% | |
| TTCGGTTAAGTACAAGGGAC+AGG | + | chr7.4:87721715-87721734 | MS.gene49538:CDS | 45.0% | |
| TTGTCTCGCTGATGCCAAAA+TGG | + | chr7.4:87722369-87722388 | MS.gene49538:CDS | 45.0% | |
| ! | CAAGCTGCTTTGTTGAGTGA+AGG | + | chr7.4:87722538-87722557 | MS.gene49538:CDS | 45.0% |
| ! | GGATCTTTTCACCGAGTGTT+TGG | + | chr7.4:87722333-87722352 | MS.gene49538:CDS | 45.0% |
| ! | GGGGAGAGGACATTGATAAT+AGG | + | chr7.4:87722098-87722117 | MS.gene49538:CDS | 45.0% |
| !! | ATAGATGCTGGTGCTATTGC+TGG | + | chr7.4:87721881-87721900 | MS.gene49538:CDS | 45.0% |
| !! | TAAGAGTATCAACCCGGATG+AGG | + | chr7.4:87722492-87722511 | MS.gene49538:CDS | 45.0% |
| !! | TCATCTTTGACTTGGGTGGT+GGG | + | chr7.4:87721999-87722018 | MS.gene49538:CDS | 45.0% |
| !! | TTCATCTTTGACTTGGGTGG+TGG | + | chr7.4:87721998-87722017 | MS.gene49538:CDS | 45.0% |
| !!! | AAGGTGTGGTTTTGTTGCCT+TGG | - | chr7.4:87721335-87721354 | None:intergenic | 45.0% |
| ACTGCCGGAAACACTCATCT+CGG | + | chr7.4:87722076-87722095 | MS.gene49538:CDS | 50.0% | |
| ACTGCTGCAGCTATTGCGTA+TGG | + | chr7.4:87721935-87721954 | MS.gene49538:CDS | 50.0% | |
| AGCTGAGAATTACCGTGTCG+AGG | + | chr7.4:87722966-87722985 | MS.gene49538:CDS | 50.0% | |
| CATAAGCAACAGCCTCATCC+GGG | - | chr7.4:87722507-87722526 | None:intergenic | 50.0% | |
| CATGATGTCGTCCTTGTTGG+TGG | + | chr7.4:87722406-87722425 | MS.gene49538:CDS | 50.0% | |
| CCATAAGCAACAGCCTCATC+CGG | - | chr7.4:87722508-87722527 | None:intergenic | 50.0% | |
| CGGAAAGCCACAATAGATGC+TGG | + | chr7.4:87721869-87721888 | MS.gene49538:CDS | 50.0% | |
| GCATACTCTCAAGCTCCTTC+AGG | - | chr7.4:87723191-87723210 | None:intergenic | 50.0% | |
| TACGCAATAGCTGCAGCAGT+AGG | - | chr7.4:87721935-87721954 | None:intergenic | 50.0% | |
| TGCAGCTATTGCGTATGGAC+TGG | + | chr7.4:87721940-87721959 | MS.gene49538:CDS | 50.0% | |
| TTCTAGACGAGCCACCAACA+AGG | - | chr7.4:87722420-87722439 | None:intergenic | 50.0% | |
| ! | CTTCGATGGTGGCTGAAGTT+TGG | - | chr7.4:87722714-87722733 | None:intergenic | 50.0% |
| ! | GCAGGAATTTTTCGCAGGGA+AGG | + | chr7.4:87722462-87722481 | MS.gene49538:CDS | 50.0% |
| !!! | CGAGACTGCAGAGGCATTTT+TGG | + | chr7.4:87721790-87721809 | MS.gene49538:CDS | 50.0% |
| AAACACTCATCTCGGGGGAG+AGG | + | chr7.4:87722084-87722103 | MS.gene49538:CDS | 55.0% | |
| AAAGATGCGCGAGACTGCAG+AGG | + | chr7.4:87721781-87721800 | MS.gene49538:CDS | 55.0% | |
| CGCCGTTCTCAACCTCCTTA+AGG | - | chr7.4:87722191-87722210 | None:intergenic | 55.0% | |
| CGCTGTCATCACCACCATTG+AGG | + | chr7.4:87722240-87722259 | MS.gene49538:CDS | 55.0% | |
| CGTATTCGTGCGTTGCTGTG+TGG | + | chr7.4:87721271-87721290 | MS.gene49538:CDS | 55.0% | |
| CGTGCAGTGGGAATCGATCT+TGG | + | chr7.4:87721243-87721262 | MS.gene49538:CDS | 55.0% | |
| CTGCCGGAAACACTCATCTC+GGG | + | chr7.4:87722077-87722096 | MS.gene49538:CDS | 55.0% | |
| TCCCCCGAGATGAGTGTTTC+CGG | - | chr7.4:87722083-87722102 | None:intergenic | 55.0% | |
| TGCCGGAAACACTCATCTCG+GGG | + | chr7.4:87722078-87722097 | MS.gene49538:CDS | 55.0% | |
| ! | CCGGATGAGGCTGTTGCTTA+TGG | + | chr7.4:87722505-87722524 | MS.gene49538:CDS | 55.0% |
| GCCGGAAACACTCATCTCGG+GGG | + | chr7.4:87722079-87722098 | MS.gene49538:CDS | 60.0% | |
| TCCTCGCGGTCACCCTTTAG+AGG | + | chr7.4:87722807-87722826 | MS.gene49538:CDS | 60.0% | |
| ! | ACCTCTAAAGGGTGACCGCG+AGG | - | chr7.4:87722811-87722830 | None:intergenic | 60.0% |
| TCTGTCCCACGTGCTCCTCG+CGG | + | chr7.4:87722793-87722812 | MS.gene49538:CDS | 65.0% | |
| ! | GGTGACCGCGAGGAGCACGT+GGG | - | chr7.4:87722801-87722820 | None:intergenic | 70.0% |
| ! | GGGTGACCGCGAGGAGCACG+TGG | - | chr7.4:87722802-87722821 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 87721222 | 87723239 | 87721222 | ID=MS.gene49538 |
| chr7.4 | mRNA | 87721222 | 87723239 | 87721222 | ID=MS.gene49538.t1;Parent=MS.gene49538 |
| chr7.4 | exon | 87721222 | 87721441 | 87721222 | ID=MS.gene49538.t1.exon1;Parent=MS.gene49538.t1 |
| chr7.4 | CDS | 87721222 | 87721441 | 87721222 | ID=cds.MS.gene49538.t1;Parent=MS.gene49538.t1 |
| chr7.4 | exon | 87721609 | 87723239 | 87721609 | ID=MS.gene49538.t1.exon2;Parent=MS.gene49538.t1 |
| chr7.4 | CDS | 87721609 | 87723239 | 87721609 | ID=cds.MS.gene49538.t1;Parent=MS.gene49538.t1 |
| Gene Sequence |
| Protein sequence |
