Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057868.t1 | XP_003607217.2 | 98.2 | 947 | 17 | 0 | 1 | 947 | 20 | 966 | 0.00E+00 | 1859.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057868.t1 | P36428 | 77.1 | 934 | 209 | 3 | 19 | 947 | 47 | 980 | 0.0e+00 | 1470.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057868.t1 | A0A396IBC8 | 98.2 | 947 | 17 | 0 | 1 | 947 | 20 | 966 | 0.0e+00 | 1859.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057868 | MS.gene52129 | 0.860375 | 2.16E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 233 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCATTTATGCCACATATTT+TGG | 0.088781 | 4.2:-34008134 | MS.gene057868:CDS |
| GTTCATAACGTTCAAGTTTA+TGG | 0.109288 | 4.2:-34000932 | MS.gene057868:CDS |
| CCTGGACGCGTTCTTCCTTT+TGG | 0.197824 | 4.2:-34008044 | MS.gene057868:CDS |
| GAAGAACGATAGATCCTTTC+TGG | 0.214827 | 4.2:+34000408 | None:intergenic |
| ACTGGTGCTCGGCCATATTC+TGG | 0.216626 | 4.2:-34005735 | MS.gene057868:CDS |
| CACCAGCTCGAATGCACTTT+TGG | 0.230089 | 4.2:+34008965 | None:intergenic |
| ATATCTCTAGCCTCAGTATC+AGG | 0.242247 | 4.2:+34008086 | None:intergenic |
| ATTTCAAATTTGCTTGGTTC+AGG | 0.247448 | 4.2:-34003003 | MS.gene057868:CDS |
| AACAGCTGTTGGACATGTTC+AGG | 0.275058 | 4.2:-34004607 | MS.gene057868:CDS |
| GGTCCAACTTTCCCAGAATA+TGG | 0.280236 | 4.2:+34005723 | None:intergenic |
| ATGGAACCTCGTCTTTATTC+AGG | 0.291356 | 4.2:-34007238 | MS.gene057868:intron |
| CAACCGGGATGCTGCATCTT+TGG | 0.297241 | 4.2:-34007292 | MS.gene057868:CDS |
| ATCAAGAACTGCTCAAAATA+AGG | 0.306307 | 4.2:-34003228 | MS.gene057868:intron |
| AGTTTGCTCAAGGCGGTATT+GGG | 0.311900 | 4.2:+34009006 | None:intergenic |
| TGAGCAAATTCAAGCTGAAT+TGG | 0.318288 | 4.2:-34000229 | MS.gene057868:CDS |
| CCAGTGTCAACATGCTTTGC+AGG | 0.319269 | 4.2:+34006916 | None:intergenic |
| ATGTATGATTAGGGGCTATA+AGG | 0.328822 | 4.2:+34000574 | None:intergenic |
| CCTCTCGTGTGTTTGAGATA+TGG | 0.330074 | 4.2:+33999865 | None:intergenic |
| TCTTTGAGATGTTAGGTAAC+TGG | 0.336497 | 4.2:-34008891 | MS.gene057868:CDS |
| ATCCTACATGCCTCGAGATA+TGG | 0.336552 | 4.2:-34007257 | MS.gene057868:CDS |
| TGGTGATGTTGGTGTAATTC+TGG | 0.341373 | 4.2:-34002410 | MS.gene057868:CDS |
| CTGTTGATGCTGATTCATTA+AGG | 0.342518 | 4.2:-34000272 | MS.gene057868:CDS |
| GACCAAGATTGCCCTACTTC+AGG | 0.355901 | 4.2:-33998488 | MS.gene057868:intron |
| TTGTCTCACCACAGTTCAAC+AGG | 0.362280 | 4.2:-34006966 | MS.gene057868:intron |
| GGCGGAGGAGACGGCGGAGG+TGG | 0.364467 | 4.2:+34009696 | None:intergenic |
| CTGTCATTTGCCATTGCTGA+TGG | 0.364745 | 4.2:-34005642 | MS.gene057868:CDS |
| AAGAGAAGAATCATGTATAC+TGG | 0.368267 | 4.2:-34009600 | MS.gene057868:CDS |
| TGCTTCTGATGCAATGAAAA+TGG | 0.378251 | 4.2:-33999766 | MS.gene057868:CDS |
| TCGTGCTTCACATTGGTAAT+GGG | 0.382910 | 4.2:-34000904 | MS.gene057868:CDS |
| CACACCTTCTTTGAGATGTT+AGG | 0.392733 | 4.2:-34008898 | MS.gene057868:CDS |
| AGAATGGCTGAGTAATGCTT+TGG | 0.394510 | 4.2:-33997878 | MS.gene057868:CDS |
| GAATGGCTGAGTAATGCTTT+GGG | 0.404215 | 4.2:-33997877 | MS.gene057868:CDS |
| CCAACTGACACAACTCTAAC+CGG | 0.410379 | 4.2:+34000049 | None:intergenic |
| TGCATATCTCACGTTAATGT+TGG | 0.411098 | 4.2:-33998219 | MS.gene057868:CDS |
| AACAACAGGAAGTGCACATT+AGG | 0.411109 | 4.2:-34004818 | MS.gene057868:CDS |
| TACCTGAAGTAGGGCAATCT+TGG | 0.411861 | 4.2:+33998486 | None:intergenic |
| CAAGAGGAAGAGGAAAGTTT+CGG | 0.412951 | 4.2:-34004786 | MS.gene057868:CDS |
| GAGTTTGCTCAAGGCGGTAT+TGG | 0.413067 | 4.2:+34009005 | None:intergenic |
| TTCGTGCTTCACATTGGTAA+TGG | 0.413069 | 4.2:-34000905 | MS.gene057868:CDS |
| CTCTCGTGTGTTTGAGATAT+GGG | 0.417253 | 4.2:+33999866 | None:intergenic |
| ATGTGTGTGCATGTATGATT+AGG | 0.419119 | 4.2:+34000564 | None:intergenic |
| GCAAAATTTAAAACAGCTGT+TGG | 0.419267 | 4.2:-34004618 | MS.gene057868:CDS |
| CTATGCTGAGCAAGGTGGTC+AGG | 0.422720 | 4.2:-34002374 | MS.gene057868:intron |
| ATAGGTAGCGTTTGAGTTGT+GGG | 0.425984 | 4.2:-34003444 | MS.gene057868:intron |
| TGTATGATTAGGGGCTATAA+GGG | 0.429923 | 4.2:+34000575 | None:intergenic |
| TTTGAGTTGTGGGATACATA+TGG | 0.434986 | 4.2:-34003434 | MS.gene057868:CDS |
| CTTAATGAATCAGCATCAAC+AGG | 0.436466 | 4.2:+34000273 | None:intergenic |
| ATTTCAGCTTTCTTAGCTGC+AGG | 0.437519 | 4.2:+33998514 | None:intergenic |
| TCAAAGAAGAAGCCATTAGC+TGG | 0.439122 | 4.2:-34008852 | MS.gene057868:CDS |
| GATGAAGCGGCTAAGCTAGA+AGG | 0.439209 | 4.2:-33999720 | MS.gene057868:CDS |
| TTTCGGCAGAACCTTAGTTA+AGG | 0.441839 | 4.2:-34004769 | MS.gene057868:intron |
| ATTGAAGGGGACGACGGGAC+TGG | 0.442727 | 4.2:+34009573 | None:intergenic |
| GACACAACTCTAACCGGATC+AGG | 0.445491 | 4.2:+34000055 | None:intergenic |
| ATACTGAGGCTAGAGATATA+TGG | 0.447714 | 4.2:-34008082 | MS.gene057868:CDS |
| ATAAAATTGACATGGCATAC+AGG | 0.448571 | 4.2:-34005689 | MS.gene057868:CDS |
| ATGTTAGGTAACTGGTCCTT+TGG | 0.450932 | 4.2:-34008883 | MS.gene057868:CDS |
| TAACTCCCATGCCCAGCTAA+TGG | 0.454328 | 4.2:+34008840 | None:intergenic |
| CATCATATAATACCTGAAGT+AGG | 0.455474 | 4.2:+33998476 | None:intergenic |
| GCCGTCTCCTCCGCCATGAC+AGG | 0.455538 | 4.2:-34009688 | MS.gene057868:CDS |
| TCCTGTCATGGCGGAGGAGA+CGG | 0.457461 | 4.2:+34009687 | None:intergenic |
| TTCACCTGTGTGAGGTCCAA+TGG | 0.463460 | 4.2:+34003407 | None:intergenic |
| AGAAGGAAGTTTGCTGGAAG+AGG | 0.463523 | 4.2:-33999703 | MS.gene057868:intron |
| GAGGAGAGTAGGGTCATTGA+AGG | 0.463658 | 4.2:+34009558 | None:intergenic |
| GTCAACATGCTTTGCAGGCA+GGG | 0.466153 | 4.2:+34006921 | None:intergenic |
| GAATGTGATTCAAGAGGAAG+AGG | 0.466985 | 4.2:-34004796 | MS.gene057868:CDS |
| CTGGTGCTCGGCCATATTCT+GGG | 0.468254 | 4.2:-34005734 | MS.gene057868:CDS |
| ATGATAATTTCAAATTTGCT+TGG | 0.470436 | 4.2:-34003009 | MS.gene057868:CDS |
| GTGCCGGAGAAAGGAGATAA+AGG | 0.472153 | 4.2:-33997916 | MS.gene057868:CDS |
| GGAAAAGGAGGTCTTGCAAC+GGG | 0.472528 | 4.2:-33997829 | MS.gene057868:CDS |
| TTTCAAATTTGCTTGGTTCA+GGG | 0.472762 | 4.2:-34003002 | MS.gene057868:intron |
| GGGAGATGTGGTAAAGGAAA+AGG | 0.476017 | 4.2:-33997844 | MS.gene057868:CDS |
| TGCCGATGCCAAGCGTATCA+AGG | 0.478205 | 4.2:-34000181 | MS.gene057868:CDS |
| CGGCCATATTCTGGGAAAGT+TGG | 0.482423 | 4.2:-34005726 | MS.gene057868:CDS |
| TTTCCCCGAGCTAAAACAAC+AGG | 0.483670 | 4.2:-34004832 | MS.gene057868:CDS |
| GCATATCTCACGTTAATGTT+GGG | 0.483698 | 4.2:-33998218 | MS.gene057868:CDS |
| AATTTGAAATTATCATCTGT+TGG | 0.486165 | 4.2:+34003016 | None:intergenic |
| AATGTAGGTCTATCCTGATC+CGG | 0.487244 | 4.2:-34000068 | MS.gene057868:intron |
| ATGCTTTGGGGCCACTGAAA+GGG | 0.487479 | 4.2:-33997864 | MS.gene057868:CDS |
| AAATGTTGTGGCAAATGTGC+TGG | 0.487583 | 4.2:-34004862 | MS.gene057868:CDS |
| TGTCAACATGCTTTGCAGGC+AGG | 0.488357 | 4.2:+34006920 | None:intergenic |
| TAAGCTAGAAGGAAGTTTGC+TGG | 0.488518 | 4.2:-33999709 | MS.gene057868:CDS |
| TGTGTGTGCATGTATGATTA+GGG | 0.489098 | 4.2:+34000565 | None:intergenic |
| GTGGCATAAATGCGATCTAA+AGG | 0.490572 | 4.2:+34008143 | None:intergenic |
| TATAGGTAGCGTTTGAGTTG+TGG | 0.493113 | 4.2:-34003445 | MS.gene057868:intron |
| TGTAGTGTGTGCTGGGGTGC+CGG | 0.494475 | 4.2:-33997932 | MS.gene057868:CDS |
| TTACCTTTATCTCCTTTCTC+CGG | 0.495540 | 4.2:+33997913 | None:intergenic |
| AAACATACTTTACATCCAAA+AGG | 0.496267 | 4.2:+34008029 | None:intergenic |
| TTGTGACAGCTGTTATTCTA+CGG | 0.496737 | 4.2:+33999796 | None:intergenic |
| CAACTTCCTCTGCAGTATAG+AGG | 0.498143 | 4.2:+34006873 | None:intergenic |
| TGTCATTTGCCATTGCTGAT+GGG | 0.498811 | 4.2:-34005641 | MS.gene057868:CDS |
| GCTGAGGAGGGAATTGCTAA+AGG | 0.500043 | 4.2:-33999822 | MS.gene057868:CDS |
| ATTGCTGATGGGTCTCGTCC+TGG | 0.500105 | 4.2:-34005630 | MS.gene057868:intron |
| AGCTGAATAGCATCGAAGAT+AGG | 0.503102 | 4.2:+34006823 | None:intergenic |
| TGACGAATGCAGGAAGTACT+TGG | 0.505300 | 4.2:-34000443 | MS.gene057868:intron |
| TGTAACACATAACAGGCAAC+TGG | 0.505452 | 4.2:-34005753 | MS.gene057868:intron |
| CATGGCGGAGGAGACGGCGG+AGG | 0.507042 | 4.2:+34009693 | None:intergenic |
| GTATACTCCGTCGAGCTGTT+CGG | 0.508490 | 4.2:-34005195 | MS.gene057868:CDS |
| GCGTTGGCGAAGAGGAGAGT+AGG | 0.508909 | 4.2:+34009547 | None:intergenic |
| GGGTTGTTGCAGATCACATC+AGG | 0.509762 | 4.2:-34005668 | MS.gene057868:CDS |
| GTCGAGCTGTTCGGTATGGT+CGG | 0.509843 | 4.2:-34005186 | MS.gene057868:CDS |
| TCACCTGTGTGAGGTCCAAT+GGG | 0.511378 | 4.2:+34003408 | None:intergenic |
| GTATGGTCGGGAAGTGCTAA+AGG | 0.513822 | 4.2:-34005173 | MS.gene057868:CDS |
| TGTGCTGGGGTGCCGGAGAA+AGG | 0.514670 | 4.2:-33997925 | MS.gene057868:CDS |
| TGTTACTATCAGCAAGCTGG+TGG | 0.517907 | 4.2:-34003094 | MS.gene057868:intron |
| GAGAGAGAAGCTACCGGCGT+TGG | 0.518104 | 4.2:+34009531 | None:intergenic |
| AACAAAGCTGTAGTGTGTGC+TGG | 0.518252 | 4.2:-33997940 | MS.gene057868:CDS |
| GGGTCATTGAAGGGGACGAC+GGG | 0.518747 | 4.2:+34009568 | None:intergenic |
| GTGGTAAAAGCAATATATAC+TGG | 0.521169 | 4.2:-34002463 | MS.gene057868:CDS |
| AGGAGGTCTTGCAACGGGAC+AGG | 0.521507 | 4.2:-33997824 | None:intergenic |
| ACAGCTGTTGGACATGTTCA+GGG | 0.521612 | 4.2:-34004606 | MS.gene057868:CDS |
| CTCCGTCGAGCTGTTCGGTA+TGG | 0.522500 | 4.2:-34005190 | MS.gene057868:CDS |
| GTCTATCCTGACCTTAACTA+AGG | 0.523455 | 4.2:+34004758 | None:intergenic |
| GTATCTCTGACGCGCTTCGC+CGG | 0.526015 | 4.2:+34009640 | None:intergenic |
| GAAAGGAGATAAAGGTAAGC+TGG | 0.527245 | 4.2:-33997908 | MS.gene057868:CDS |
| ACCCTTGATACGCTTGGCAT+CGG | 0.527787 | 4.2:+34000179 | None:intergenic |
| CCGGTTAGAGTTGTGTCAGT+TGG | 0.528364 | 4.2:-34000049 | MS.gene057868:CDS |
| TACAAAAGTCATTGATCAGA+AGG | 0.530377 | 4.2:-33998166 | MS.gene057868:intron |
| TTCTTTGAAGTAATCGCCAA+AGG | 0.530535 | 4.2:+34008867 | None:intergenic |
| AATGCTTTGGGGCCACTGAA+AGG | 0.530573 | 4.2:-33997865 | MS.gene057868:CDS |
| AAGAAGCCATTAGCTGGGCA+TGG | 0.530759 | 4.2:-34008846 | MS.gene057868:CDS |
| ATCATATAATACCTGAAGTA+GGG | 0.532869 | 4.2:+33998477 | None:intergenic |
| CCTGCAAAGCATGTTGACAC+TGG | 0.534391 | 4.2:-34006916 | MS.gene057868:CDS |
| TCGAGCTGTTCGGTATGGTC+GGG | 0.534669 | 4.2:-34005185 | MS.gene057868:CDS |
| CCAAAAGGAAGAACGCGTCC+AGG | 0.534992 | 4.2:+34008044 | None:intergenic |
| GCTGATCTAGCTGTTTCAGA+TGG | 0.536347 | 4.2:-33998252 | MS.gene057868:CDS |
| TATCTCTAGCCTCAGTATCA+GGG | 0.541007 | 4.2:+34008087 | None:intergenic |
| GTTAATACTGATGGTGATGT+TGG | 0.542418 | 4.2:-34002421 | MS.gene057868:CDS |
| TATCTTCGATGCTATTCAGC+TGG | 0.542663 | 4.2:-34006821 | MS.gene057868:intron |
| GAACTTGAAATGAAGCATGT+TGG | 0.543494 | 4.2:+34000951 | None:intergenic |
| GTTGATTCAGTTAATACTGA+TGG | 0.545376 | 4.2:-34002430 | MS.gene057868:CDS |
| AGGAGAGTAGGGTCATTGAA+GGG | 0.545848 | 4.2:+34009559 | None:intergenic |
| AGCTACCGGCGTTGGCGAAG+AGG | 0.546190 | 4.2:+34009539 | None:intergenic |
| AAGCATGTTGACACTGGAAT+GGG | 0.546666 | 4.2:-34006910 | MS.gene057868:CDS |
| ACAAAGCTGTAGTGTGTGCT+GGG | 0.548423 | 4.2:-33997939 | MS.gene057868:CDS |
| TCGCAGACCCTTGATACGCT+TGG | 0.548676 | 4.2:+34000173 | None:intergenic |
| ACCCAAAAGTGCATTCGAGC+TGG | 0.549128 | 4.2:-34008967 | MS.gene057868:CDS |
| TTACCACATCTCCCTTTCAG+TGG | 0.549551 | 4.2:+33997853 | None:intergenic |
| CTCATCACCACCAAAATATG+TGG | 0.551078 | 4.2:+34008124 | None:intergenic |
| TCAAAATGAATTTCTGTGCA+AGG | 0.551129 | 4.2:+34007324 | None:intergenic |
| CTTCACATTGGTAATGGGAC+TGG | 0.552145 | 4.2:-34000899 | MS.gene057868:CDS |
| CTGATCTAGCTGTTTCAGAT+GGG | 0.557727 | 4.2:-33998251 | MS.gene057868:CDS |
| CTGAAAGGGAGATGTGGTAA+AGG | 0.558294 | 4.2:-33997850 | MS.gene057868:CDS |
| GTTACCTAACATCTCAAAGA+AGG | 0.560082 | 4.2:+34008894 | None:intergenic |
| GGATACATATGGCTTCCCAT+TGG | 0.561612 | 4.2:-34003423 | MS.gene057868:CDS |
| TTCAGGGAAACATACTGAGT+GGG | 0.561646 | 4.2:-34004590 | MS.gene057868:CDS |
| AATGGGACTGGTATCTCTGT+TGG | 0.562252 | 4.2:-34000887 | MS.gene057868:CDS |
| ATGGGTGACACTGGTCCTTG+TGG | 0.566112 | 4.2:-34007348 | MS.gene057868:CDS |
| TGGCCTTGCCCCTGATACTG+AGG | 0.566728 | 4.2:-34008096 | MS.gene057868:CDS |
| TGTAACGTTAACAGCTGAGA+AGG | 0.569754 | 4.2:-33998274 | MS.gene057868:CDS |
| GCCGATGCCAAGCGTATCAA+GGG | 0.570608 | 4.2:-34000180 | MS.gene057868:CDS |
| ACTCTCCTCTTCGCCAACGC+CGG | 0.576230 | 4.2:-34009544 | MS.gene057868:intron |
| CATAACAGGCAACTGGTGCT+CGG | 0.576350 | 4.2:-34005746 | MS.gene057868:intron |
| TAAAATTGACATGGCATACA+GGG | 0.577632 | 4.2:-34005688 | MS.gene057868:CDS |
| AAATTACATGTCGATGTCGA+AGG | 0.578758 | 4.2:-34003284 | MS.gene057868:CDS |
| GGAAGTGCTAAAGGCTGAAG+AGG | 0.579775 | 4.2:-34005164 | MS.gene057868:CDS |
| ATCAGTTCCTGTCATGGCGG+AGG | 0.579820 | 4.2:+34009681 | None:intergenic |
| TCTATTTCATCTGAATTGTG+TGG | 0.581871 | 4.2:-33999977 | MS.gene057868:CDS |
| AGAAGCCATTAGCTGGGCAT+GGG | 0.582659 | 4.2:-34008845 | MS.gene057868:CDS |
| TGAATTGGATGTAAATGCAA+AGG | 0.585842 | 4.2:-34000214 | MS.gene057868:CDS |
| TACACTCGATATCGAGTGGC+CGG | 0.585939 | 4.2:-34009659 | MS.gene057868:CDS |
| ACATCTCAAAGAAGGTGTGA+TGG | 0.587964 | 4.2:+34008902 | None:intergenic |
| GAGTGTATCAGTTCCTGTCA+TGG | 0.589194 | 4.2:+34009675 | None:intergenic |
| AGCTGGTGGTGCTATTGTCA+TGG | 0.590439 | 4.2:-34003080 | MS.gene057868:CDS |
| CATAACGTTCAAGTTTATGG+AGG | 0.590521 | 4.2:-34000929 | MS.gene057868:CDS |
| AGATGTGGTAAAGGAAAAGG+AGG | 0.595385 | 4.2:-33997841 | MS.gene057868:CDS |
| GGCAATCATGTAGACCAGAA+AGG | 0.595519 | 4.2:-34000422 | MS.gene057868:CDS |
| AAAGCATGTTGACACTGGAA+TGG | 0.597758 | 4.2:-34006911 | MS.gene057868:CDS |
| AGCACGGGAGAGTTTGCTCA+AGG | 0.598627 | 4.2:+34008996 | None:intergenic |
| GAGATACCGTGAGAGGGTGG+CGG | 0.599144 | 4.2:+34009733 | None:intergenic |
| TAGCCTCAGTATCAGGGGCA+AGG | 0.601926 | 4.2:+34008093 | None:intergenic |
| CGATGTTGCAGCAGTTCGTG+AGG | 0.602573 | 4.2:-33998193 | MS.gene057868:CDS |
| TTCATCTTTGAAAAGCAATG+TGG | 0.602709 | 4.2:-33998551 | MS.gene057868:CDS |
| TAACCAAAGATGCAGCATCC+CGG | 0.603690 | 4.2:+34007289 | None:intergenic |
| AATGGCTGAGTAATGCTTTG+GGG | 0.604194 | 4.2:-33997876 | MS.gene057868:CDS |
| CAAAGAAGAAGCCATTAGCT+GGG | 0.605025 | 4.2:-34008851 | MS.gene057868:CDS |
| CAAAAGTGCATTCGAGCTGG+TGG | 0.606727 | 4.2:-34008964 | MS.gene057868:CDS |
| ATCTCTAGCCTCAGTATCAG+GGG | 0.608234 | 4.2:+34008088 | None:intergenic |
| TTTCGTTATCAGGGTCAGCA+AGG | 0.608732 | 4.2:+34000008 | None:intergenic |
| GGAGAGTAGGGTCATTGAAG+GGG | 0.610058 | 4.2:+34009560 | None:intergenic |
| AGGGTCATTGAAGGGGACGA+CGG | 0.610203 | 4.2:+34009567 | None:intergenic |
| CGTTGGCGAAGAGGAGAGTA+GGG | 0.610687 | 4.2:+34009548 | None:intergenic |
| CACAATGATCTTGACGACGT+GGG | 0.612293 | 4.2:-34008937 | MS.gene057868:CDS |
| TGAGAAGCAAGTAGATGAAG+CGG | 0.615185 | 4.2:-33999733 | MS.gene057868:CDS |
| TAAACAGGGATTGTCAGTGA+TGG | 0.616674 | 4.2:-33997986 | MS.gene057868:intron |
| TTAGCGCCGCCACCCTCTCA+CGG | 0.618261 | 4.2:-34009739 | None:intergenic |
| GGAGGTTTCGTGCTTCACAT+TGG | 0.619470 | 4.2:-34000911 | MS.gene057868:CDS |
| TTTGGTGGTGATGAGAAAGC+TGG | 0.620486 | 4.2:-34008116 | MS.gene057868:CDS |
| AATGTTGTGGCAAATGTGCT+GGG | 0.621430 | 4.2:-34004861 | MS.gene057868:CDS |
| ACAAGCTTCTATGCTGAGCA+AGG | 0.625524 | 4.2:-34002382 | MS.gene057868:CDS |
| ATTTCTGTGCAAGGTCCACA+AGG | 0.625777 | 4.2:+34007333 | None:intergenic |
| AGGACGAGACCCATCAGCAA+TGG | 0.627510 | 4.2:+34005632 | None:intergenic |
| GTCTTAGGACCATGAGAGTG+TGG | 0.631834 | 4.2:-34002482 | MS.gene057868:intron |
| ATTGGATGTAAATGCAAAGG+AGG | 0.632135 | 4.2:-34000211 | MS.gene057868:CDS |
| ACAATGATCTTGACGACGTG+GGG | 0.633719 | 4.2:-34008936 | MS.gene057868:CDS |
| GACCATACCGAACAGCTCGA+CGG | 0.633901 | 4.2:+34005188 | None:intergenic |
| TTCCATATCTCGAGGCATGT+AGG | 0.636693 | 4.2:+34007255 | None:intergenic |
| TGTCATGGCGGAGGAGACGG+CGG | 0.638181 | 4.2:+34009690 | None:intergenic |
| CTCGAGATACCGTGAGAGGG+TGG | 0.639179 | 4.2:+34009730 | None:intergenic |
| CATTAGGAATGTGATTCAAG+AGG | 0.642500 | 4.2:-34004802 | MS.gene057868:CDS |
| GTTTGCTCAAGGCGGTATTG+GGG | 0.644495 | 4.2:+34009007 | None:intergenic |
| CTTCCCATTGGACCTCACAC+AGG | 0.645170 | 4.2:-34003411 | MS.gene057868:intron |
| GTAAGCTGGATGTATCAGAA+TGG | 0.647412 | 4.2:-33997894 | MS.gene057868:CDS |
| ATGTTGGAAATCAAGAGACC+CGG | 0.647630 | 4.2:+34000967 | None:intergenic |
| CAGTTCAACAGGGAGGCTGA+CGG | 0.650951 | 4.2:-34006955 | MS.gene057868:CDS |
| TGGCGACAAAGTAGTATGCA+AGG | 0.651339 | 4.2:-34000867 | MS.gene057868:intron |
| GAAGTGCTAAAGGCTGAAGA+GGG | 0.651588 | 4.2:-34005163 | MS.gene057868:CDS |
| AGATCTCGAGATACCGTGAG+AGG | 0.654707 | 4.2:+34009726 | None:intergenic |
| GATCTCGAGATACCGTGAGA+GGG | 0.655018 | 4.2:+34009727 | None:intergenic |
| GGGCCACTGAAAGGGAGATG+TGG | 0.655092 | 4.2:-33997856 | MS.gene057868:CDS |
| GACTGACCTCTATACTGCAG+AGG | 0.655134 | 4.2:-34006879 | MS.gene057868:CDS |
| GCACAATGATCTTGACGACG+TGG | 0.658642 | 4.2:-34008938 | MS.gene057868:CDS |
| ATTTCATCTGAATTGTGTGG+TGG | 0.658972 | 4.2:-33999974 | MS.gene057868:intron |
| CTCTTCGAAGAACTTGACGA+AGG | 0.661427 | 4.2:+34009618 | None:intergenic |
| AATCAGGCTTGTAAATGTTG+TGG | 0.668615 | 4.2:-34004874 | MS.gene057868:intron |
| AGACGAGGTTCCATATCTCG+AGG | 0.669081 | 4.2:+34007247 | None:intergenic |
| AGGAAAAGGAGGTCTTGCAA+CGG | 0.669184 | 4.2:-33997830 | MS.gene057868:CDS |
| TGTCTCACCACAGTTCAACA+GGG | 0.670149 | 4.2:-34006965 | MS.gene057868:intron |
| AGATGCTGATAAAATTGACA+TGG | 0.670809 | 4.2:-34005697 | MS.gene057868:CDS |
| AAAGGAAGAACGCGTCCAGG+AGG | 0.675704 | 4.2:+34008047 | None:intergenic |
| TCAGGGAAACATACTGAGTG+GGG | 0.678837 | 4.2:-34004589 | MS.gene057868:CDS |
| GGGAAACATACTGAGTGGGG+AGG | 0.679009 | 4.2:-34004586 | MS.gene057868:intron |
| CTGATACACTCGATATCGAG+TGG | 0.683989 | 4.2:-34009663 | MS.gene057868:CDS |
| AGAACAACTTCACCTGTGTG+AGG | 0.685827 | 4.2:+34003399 | None:intergenic |
| GTTCAGGGAAACATACTGAG+TGG | 0.687325 | 4.2:-34004591 | MS.gene057868:CDS |
| CCATATCTCAAACACACGAG+AGG | 0.696552 | 4.2:-33999865 | MS.gene057868:CDS |
| AGCTTCTATGCTGAGCAAGG+TGG | 0.702055 | 4.2:-34002379 | MS.gene057868:CDS |
| GTGTGTGCATGTATGATTAG+GGG | 0.702667 | 4.2:+34000566 | None:intergenic |
| AAGGTCGTGAGTATGTTCTG+AGG | 0.708774 | 4.2:-34005219 | MS.gene057868:CDS |
| ACGGGAGAGTTTGCTCAAGG+CGG | 0.709960 | 4.2:+34008999 | None:intergenic |
| TGTATCAGTTCCTGTCATGG+CGG | 0.715205 | 4.2:+34009678 | None:intergenic |
| CAAAGCTGTAGTGTGTGCTG+GGG | 0.725318 | 4.2:-33997938 | MS.gene057868:CDS |
| AAAATACCTGAATAAAGACG+AGG | 0.734207 | 4.2:+34007232 | None:intergenic |
| CTCACCACAGTTCAACAGGG+AGG | 0.740280 | 4.2:-34006962 | MS.gene057868:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 33997825 | 34009757 | 33997825 | ID=MS.gene057868 |
| chr4.2 | mRNA | 33997825 | 34009757 | 33997825 | ID=MS.gene057868.t1;Parent=MS.gene057868 |
| chr4.2 | exon | 34009545 | 34009757 | 34009545 | ID=MS.gene057868.t1.exon1;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34009545 | 34009757 | 34009545 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34008831 | 34009069 | 34008831 | ID=MS.gene057868.t1.exon2;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34008831 | 34009069 | 34008831 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34008037 | 34008177 | 34008037 | ID=MS.gene057868.t1.exon3;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34008037 | 34008177 | 34008037 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34007239 | 34007385 | 34007239 | ID=MS.gene057868.t1.exon4;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34007239 | 34007385 | 34007239 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34006822 | 34006974 | 34006822 | ID=MS.gene057868.t1.exon5;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34006822 | 34006974 | 34006822 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34005631 | 34005760 | 34005631 | ID=MS.gene057868.t1.exon6;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34005631 | 34005760 | 34005631 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34005151 | 34005247 | 34005151 | ID=MS.gene057868.t1.exon7;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34005151 | 34005247 | 34005151 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34004770 | 34004890 | 34004770 | ID=MS.gene057868.t1.exon8;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34004770 | 34004890 | 34004770 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34004587 | 34004646 | 34004587 | ID=MS.gene057868.t1.exon9;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34004587 | 34004646 | 34004587 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34003412 | 34003462 | 34003412 | ID=MS.gene057868.t1.exon10;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34003412 | 34003462 | 34003412 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34003229 | 34003324 | 34003229 | ID=MS.gene057868.t1.exon11;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34003229 | 34003324 | 34003229 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34003003 | 34003104 | 34003003 | ID=MS.gene057868.t1.exon12;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34003003 | 34003104 | 34003003 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34002375 | 34002497 | 34002375 | ID=MS.gene057868.t1.exon13;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34002375 | 34002497 | 34002375 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34000868 | 34000999 | 34000868 | ID=MS.gene057868.t1.exon14;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34000868 | 34000999 | 34000868 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34000545 | 34000616 | 34000545 | ID=MS.gene057868.t1.exon15;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34000545 | 34000616 | 34000545 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34000378 | 34000453 | 34000378 | ID=MS.gene057868.t1.exon16;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34000378 | 34000453 | 34000378 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 34000158 | 34000300 | 34000158 | ID=MS.gene057868.t1.exon17;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 34000158 | 34000300 | 34000158 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 33999975 | 34000083 | 33999975 | ID=MS.gene057868.t1.exon18;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 33999975 | 34000083 | 33999975 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 33999704 | 33999891 | 33999704 | ID=MS.gene057868.t1.exon19;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 33999704 | 33999891 | 33999704 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 33998489 | 33998578 | 33998489 | ID=MS.gene057868.t1.exon20;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 33998489 | 33998578 | 33998489 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 33998167 | 33998349 | 33998167 | ID=MS.gene057868.t1.exon21;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 33998167 | 33998349 | 33998167 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| chr4.2 | exon | 33997825 | 33998001 | 33997825 | ID=MS.gene057868.t1.exon22;Parent=MS.gene057868.t1 |
| chr4.2 | CDS | 33997825 | 33998001 | 33997825 | ID=cds.MS.gene057868.t1;Parent=MS.gene057868.t1 |
| Gene Sequence |
| Protein sequence |
