Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057950.t1 | XP_003598926.1 | 86.8 | 365 | 48 | 0 | 1 | 365 | 1 | 365 | 1.30E-182 | 649 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057950.t1 | G7IWC5 | 86.8 | 365 | 48 | 0 | 1 | 365 | 1 | 365 | 9.1e-183 | 649.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057950 | MS.gene33365 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene057950 | MS.gene81288 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene057950 | MS.gene85343 | 0.828056 | 1.11E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057950.t1 | MTR_3g023510 | 94.247 | 365 | 21 | 0 | 1 | 365 | 1 | 365 | 0.0 | 677 |
| MS.gene057950.t1 | MTR_7g090780 | 33.333 | 228 | 133 | 4 | 24 | 238 | 25 | 246 | 3.58e-34 | 128 |
| MS.gene057950.t1 | MTR_1g051750 | 33.491 | 212 | 133 | 5 | 33 | 244 | 20 | 223 | 1.92e-31 | 119 |
| MS.gene057950.t1 | MTR_7g090775 | 48.980 | 98 | 50 | 0 | 30 | 127 | 10 | 107 | 1.99e-31 | 120 |
| MS.gene057950.t1 | MTR_7g090830 | 32.735 | 223 | 137 | 3 | 38 | 252 | 20 | 237 | 4.06e-31 | 119 |
| MS.gene057950.t1 | MTR_7g090800 | 39.669 | 121 | 65 | 2 | 27 | 147 | 28 | 140 | 4.85e-28 | 112 |
| MS.gene057950.t1 | MTR_7g090820 | 45.192 | 104 | 56 | 1 | 24 | 127 | 21 | 123 | 7.10e-27 | 109 |
| MS.gene057950.t1 | MTR_7g090860 | 29.435 | 248 | 144 | 6 | 24 | 252 | 26 | 261 | 6.37e-25 | 106 |
| MS.gene057950.t1 | MTR_7g090780 | 31.383 | 188 | 111 | 3 | 64 | 238 | 1 | 183 | 3.01e-21 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057950.t1 | AT3G51940 | 42.069 | 145 | 66 | 3 | 1 | 136 | 1 | 136 | 2.54e-32 | 126 |
| MS.gene057950.t1 | AT3G51940 | 49.505 | 101 | 50 | 1 | 37 | 136 | 32 | 132 | 1.95e-31 | 124 |
| MS.gene057950.t1 | AT5G03990 | 42.982 | 114 | 63 | 1 | 38 | 151 | 41 | 152 | 3.85e-28 | 112 |
| MS.gene057950.t1 | AT5G03990 | 43.182 | 88 | 48 | 1 | 64 | 151 | 1 | 86 | 3.81e-18 | 83.2 |
Find 104 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATTCCTTTATCAGTTC+AGG | 0.243635 | 3.4:+15413084 | None:intergenic |
| CTGTGTAGTGGTTGGAATTC+TGG | 0.251276 | 3.4:-15412751 | MS.gene057950:CDS |
| GGAGGGAGCAAAGTAGAAAA+AGG | 0.265121 | 3.4:-15412381 | MS.gene057950:CDS |
| TAGCCAAATTATTCGACTTC+TGG | 0.287003 | 3.4:+15412674 | None:intergenic |
| TTCTCTTGTTCTTCTTCATC+GGG | 0.290967 | 3.4:+15413042 | None:intergenic |
| GGCACGATGGAATACCATTA+TGG | 0.292782 | 3.4:-15413341 | MS.gene057950:CDS |
| GGCTCTGATATCGTAGAAAA+TGG | 0.306309 | 3.4:+15416061 | None:intergenic |
| CCACCAGAAGTCGAATAATT+TGG | 0.312437 | 3.4:-15412677 | MS.gene057950:CDS |
| CAATATTTCTTCTCCCATAA+TGG | 0.315390 | 3.4:+15413327 | None:intergenic |
| GTACTTGATTGGAAGGATTC+AGG | 0.321860 | 3.4:-15413234 | MS.gene057950:CDS |
| ATAAAGGATGGGGCGAAGTT+AGG | 0.333730 | 3.4:-15412714 | MS.gene057950:CDS |
| TATTGACCCTGAACTGATAA+AGG | 0.344524 | 3.4:-15413091 | MS.gene057950:CDS |
| TCACAGTTTAGAAGGAATAA+TGG | 0.346693 | 3.4:-15412523 | MS.gene057950:CDS |
| TAGAAAATGGAAGGAGGATT+AGG | 0.350491 | 3.4:+15416074 | None:intergenic |
| ATAATCAAACAGGTCATTAC+TGG | 0.350633 | 3.4:-15412405 | MS.gene057950:CDS |
| GGCTAATAGTGGCAACTCTT+GGG | 0.353935 | 3.4:-15412656 | MS.gene057950:CDS |
| CAAGCGATTCACAGTTTAGA+AGG | 0.357614 | 3.4:-15412531 | MS.gene057950:CDS |
| ATTCTCTTGTTCTTCTTCAT+CGG | 0.362748 | 3.4:+15413041 | None:intergenic |
| TTTCAAACATGTTAGACTTC+CGG | 0.374214 | 3.4:-15413362 | MS.gene057950:intron |
| GTTTGATTATCATCCCTTTG+AGG | 0.378597 | 3.4:+15412418 | None:intergenic |
| AGACATAATCTAAGCTATAA+TGG | 0.382533 | 3.4:-15412448 | MS.gene057950:CDS |
| GATATCAGAGCCCCTCTTCC+TGG | 0.388074 | 3.4:-15416050 | MS.gene057950:intron |
| TGGCTAATAGTGGCAACTCT+TGG | 0.395476 | 3.4:-15412657 | MS.gene057950:CDS |
| GGATGCTTACAGACAGATAA+AGG | 0.395990 | 3.4:-15412730 | MS.gene057950:CDS |
| TAAAGGATGGGGCGAAGTTA+GGG | 0.411792 | 3.4:-15412713 | MS.gene057950:CDS |
| GTCACCACAATGTACTTGAT+TGG | 0.426706 | 3.4:-15413245 | MS.gene057950:CDS |
| CTTATATTGAGCAAATAGAT+TGG | 0.428371 | 3.4:-15413122 | MS.gene057950:CDS |
| CTAATTCCTTTATCAGTTCA+GGG | 0.428666 | 3.4:+15413085 | None:intergenic |
| TATTAGAGCCTACCCGTGTT+TGG | 0.428836 | 3.4:+15412470 | None:intergenic |
| AAGTCTAGGGGTTGGAATGA+AGG | 0.430103 | 3.4:-15412790 | MS.gene057950:CDS |
| GTGACAGTAGATCAACTCTT+TGG | 0.431445 | 3.4:+15413263 | None:intergenic |
| GCGAAGTTAGGGATAATTCT+TGG | 0.433434 | 3.4:-15412702 | MS.gene057950:CDS |
| AAGGATTAACTGACAATGCT+TGG | 0.437164 | 3.4:-15412828 | MS.gene057950:CDS |
| ATTTGCTCAATATAAGCATC+TGG | 0.439706 | 3.4:+15413129 | None:intergenic |
| AATAATGGAGGTTGGAACTC+TGG | 0.440008 | 3.4:-15412508 | MS.gene057950:CDS |
| CAGTCAATGGTGAAAATCCA+TGG | 0.458320 | 3.4:-15412990 | MS.gene057950:CDS |
| TCGAATAATTTGGCTAATAG+TGG | 0.461183 | 3.4:-15412667 | MS.gene057950:CDS |
| GCACGATGGAATACCATTAT+GGG | 0.465596 | 3.4:-15413340 | MS.gene057950:CDS |
| TCAATATAAGCATCTGGATC+AGG | 0.470674 | 3.4:+15413135 | None:intergenic |
| CAAAGGGATGATAATCAAAC+AGG | 0.471931 | 3.4:-15412415 | MS.gene057950:CDS |
| ATCAGTTCAGGGTCAATACA+AGG | 0.475020 | 3.4:+15413096 | None:intergenic |
| TTTCTCCATCCTGTGTTCAT+CGG | 0.487768 | 3.4:+15412604 | None:intergenic |
| CATGATAATTCTGAAAATGT+AGG | 0.488496 | 3.4:-15412895 | MS.gene057950:CDS |
| TAATGGATCTCAGCCTCAAA+GGG | 0.493679 | 3.4:-15412431 | MS.gene057950:CDS |
| CCACAATGTACTTGATTGGA+AGG | 0.496434 | 3.4:-15413241 | MS.gene057950:CDS |
| AGGATTAACTGACAATGCTT+GGG | 0.501555 | 3.4:-15412827 | MS.gene057950:CDS |
| ATAATGGAGGTTGGAACTCT+GGG | 0.508427 | 3.4:-15412507 | MS.gene057950:CDS |
| TTAGAAGGAATAATGGAGGT+TGG | 0.513562 | 3.4:-15412516 | MS.gene057950:CDS |
| AAGAAATATTGCACGTTGAG+TGG | 0.515446 | 3.4:-15413315 | MS.gene057950:CDS |
| AAACAGGTCATTACTGGAGG+AGG | 0.515705 | 3.4:-15412399 | MS.gene057950:CDS |
| GTGGAACAAATGTGCCAAGA+TGG | 0.517033 | 3.4:-15412579 | MS.gene057950:CDS |
| TAGGAACTACGGATAATCCA+TGG | 0.521872 | 3.4:-15412876 | MS.gene057950:CDS |
| CTAGGGGTTGGAATGAAGGA+AGG | 0.528521 | 3.4:-15412786 | MS.gene057950:CDS |
| TTCTGAAAATGTAGGAACTA+CGG | 0.528692 | 3.4:-15412887 | MS.gene057950:CDS |
| AGTGCCATTCGTGGAAATCA+AGG | 0.528865 | 3.4:-15412847 | MS.gene057950:CDS |
| CCAAATTATTCGACTTCTGG+TGG | 0.530637 | 3.4:+15412677 | None:intergenic |
| AATTATCATGATAATCCGCC+TGG | 0.534084 | 3.4:+15412908 | None:intergenic |
| TGGGAGAGTAGTGCCATTCG+TGG | 0.535593 | 3.4:-15412856 | MS.gene057950:CDS |
| ACTGACAATGCTTGGGAAGG+TGG | 0.537954 | 3.4:-15412820 | MS.gene057950:CDS |
| GCTAATAGTGGCAACTCTTG+GGG | 0.541349 | 3.4:-15412655 | MS.gene057950:CDS |
| AGGTGGTCATGATAAGTCTA+GGG | 0.542014 | 3.4:-15412803 | MS.gene057950:CDS |
| ATCAGAGTTACCACCAAACA+CGG | 0.548677 | 3.4:-15412483 | MS.gene057950:CDS |
| AAGGTGGTCATGATAAGTCT+AGG | 0.549243 | 3.4:-15412804 | MS.gene057950:CDS |
| TAGAGCCTACCCGTGTTTGG+TGG | 0.549588 | 3.4:+15412473 | None:intergenic |
| ATAACAATCTGTGTAGTGGT+TGG | 0.554403 | 3.4:-15412759 | MS.gene057950:CDS |
| GCTTACAGACAGATAAAGGA+TGG | 0.556492 | 3.4:-15412726 | MS.gene057950:CDS |
| GGAATTATCGTCCATCGCGT+AGG | 0.557626 | 3.4:-15416112 | MS.gene057950:CDS |
| GATGTTGCAGCACATTCCCA+TGG | 0.564310 | 3.4:+15412973 | None:intergenic |
| CTGATATCGTAGAAAATGGA+AGG | 0.577481 | 3.4:+15416065 | None:intergenic |
| ATAATGGATCTCAGCCTCAA+AGG | 0.583345 | 3.4:-15412432 | MS.gene057950:CDS |
| TAATCCTTGATTTCCACGAA+TGG | 0.587762 | 3.4:+15412843 | None:intergenic |
| TTAGAAAATAATGAAGTCCA+AGG | 0.588556 | 3.4:-15412937 | MS.gene057950:CDS |
| CGAATGGCACTACTCTCCCA+TGG | 0.588725 | 3.4:+15412859 | None:intergenic |
| GTCATGATAAGTCTAGGGGT+TGG | 0.589445 | 3.4:-15412798 | MS.gene057950:CDS |
| GAATGTGCTGCAACATCTGT+TGG | 0.591507 | 3.4:-15412967 | MS.gene057950:CDS |
| ATCAGGCAGAGAAATATCAC+AGG | 0.591641 | 3.4:+15413152 | None:intergenic |
| TAATTCCGATGAACACAGGA+TGG | 0.598053 | 3.4:-15412609 | MS.gene057950:CDS |
| AGTCAATGGTGAAAATCCAT+GGG | 0.603395 | 3.4:-15412989 | MS.gene057950:CDS |
| GATCATAACAATCTGTGTAG+TGG | 0.611867 | 3.4:-15412763 | MS.gene057950:CDS |
| AACAGGTCATTACTGGAGGA+GGG | 0.612565 | 3.4:-15412398 | MS.gene057950:CDS |
| ATAATGGTATTCCATCGTGC+CGG | 0.619995 | 3.4:+15413343 | None:intergenic |
| CTTACAGACAGATAAAGGAT+GGG | 0.621956 | 3.4:-15412725 | MS.gene057950:CDS |
| TGAAGTCCAAGGACAAAACC+AGG | 0.622058 | 3.4:-15412926 | MS.gene057950:CDS |
| CTACGACGAAACCTACGCGA+TGG | 0.626959 | 3.4:+15416101 | None:intergenic |
| ATCAAACAGGTCATTACTGG+AGG | 0.631671 | 3.4:-15412402 | MS.gene057950:CDS |
| GCAGAGAAATATCACAGGGA+AGG | 0.633471 | 3.4:+15413157 | None:intergenic |
| GCTGCAACATCTGTTGGCAG+AGG | 0.634134 | 3.4:-15412961 | MS.gene057950:CDS |
| CAGTTTAGAAGGAATAATGG+AGG | 0.640193 | 3.4:-15412520 | MS.gene057950:CDS |
| TTAACTGACAATGCTTGGGA+AGG | 0.640257 | 3.4:-15412823 | MS.gene057950:CDS |
| CGTTGAGTGGATGTGTAGCA+TGG | 0.641013 | 3.4:-15413302 | MS.gene057950:CDS |
| TTACAGACAGATAAAGGATG+GGG | 0.642059 | 3.4:-15412724 | MS.gene057950:CDS |
| AATGTAATTCCGATGAACAC+AGG | 0.642113 | 3.4:-15412613 | MS.gene057950:CDS |
| CCTTCCAATCAAGTACATTG+TGG | 0.644921 | 3.4:+15413241 | None:intergenic |
| AACACAGGATGGAGAAACAG+TGG | 0.645237 | 3.4:-15412598 | MS.gene057950:CDS |
| TCTCTTGTTCTTCTTCATCG+GGG | 0.646872 | 3.4:+15413043 | None:intergenic |
| TAGGGGTTGGAATGAAGGAA+GGG | 0.646947 | 3.4:-15412785 | MS.gene057950:CDS |
| AGTTACCACCAAACACGGGT+AGG | 0.650718 | 3.4:-15412478 | MS.gene057950:CDS |
| ATGTTAGACTTCCGGCACGA+TGG | 0.657049 | 3.4:-15413354 | MS.gene057950:intron |
| AGGAACTACGGATAATCCAT+GGG | 0.657303 | 3.4:-15412875 | MS.gene057950:CDS |
| ATATCGTAGAAAATGGAAGG+AGG | 0.685555 | 3.4:+15416068 | None:intergenic |
| TCAGAGTTACCACCAAACAC+GGG | 0.697588 | 3.4:-15412482 | MS.gene057950:CDS |
| GGTGGTCATGATAAGTCTAG+GGG | 0.707177 | 3.4:-15412802 | MS.gene057950:CDS |
| TCAGGCAGAGAAATATCACA+GGG | 0.734916 | 3.4:+15413153 | None:intergenic |
| AGTCCAAGGACAAAACCAGG+CGG | 0.787265 | 3.4:-15412923 | MS.gene057950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAACTATTTAATTAA+TGG | + | chr3.4:15414592-15414611 | None:intergenic | 10.0% |
| !! | ATTGTAACTATTTAATTAAT+GGG | + | chr3.4:15414591-15414610 | None:intergenic | 10.0% |
| !! | AAATATTATAGATCCAATAA+TGG | - | chr3.4:15413959-15413978 | MS.gene057950:intron | 15.0% |
| !! | AAGAATTAAAAAAAATTACC+AGG | + | chr3.4:15412459-15412478 | None:intergenic | 15.0% |
| !! | AATAATTCGATTAAATTATG+TGG | - | chr3.4:15413285-15413304 | MS.gene057950:CDS | 15.0% |
| !! | ATCGAATTATTAATTGAATA+AGG | + | chr3.4:15413276-15413295 | None:intergenic | 15.0% |
| !! | TGATAATTTATTGTATGTTA+CGG | - | chr3.4:15415054-15415073 | MS.gene057950:intron | 15.0% |
| !! | TGTAACTATAATTTAATCAT+TGG | - | chr3.4:15414845-15414864 | MS.gene057950:intron | 15.0% |
| !! | TTAACTATACTTTACATAAT+TGG | - | chr3.4:15414898-15414917 | MS.gene057950:intron | 15.0% |
| !! | TTGTAACTATTTAATTAATG+GGG | + | chr3.4:15414590-15414609 | None:intergenic | 15.0% |
| !!! | CTAATATTTTGTGTTAAAAT+AGG | - | chr3.4:15414716-15414735 | MS.gene057950:intron | 15.0% |
| !!! | CTATTTTAACACAAAATATT+AGG | + | chr3.4:15414718-15414737 | None:intergenic | 15.0% |
| !! | AAAATAATCATACAAAAGTG+GGG | + | chr3.4:15412887-15412906 | None:intergenic | 20.0% |
| !! | AACTAGTGTTATGATTAATA+TGG | - | chr3.4:15413816-15413835 | MS.gene057950:intron | 20.0% |
| !! | AATATCTACAATCATCTTAA+TGG | + | chr3.4:15413424-15413443 | None:intergenic | 20.0% |
| !! | ATTTATTTGTAGGAACTAAA+GGG | - | chr3.4:15412802-15412821 | MS.gene057950:CDS | 20.0% |
| !! | CAAAATAATCATACAAAAGT+GGG | + | chr3.4:15412888-15412907 | None:intergenic | 20.0% |
| !! | CAAAATTAATTGAAGCTAAT+GGG | - | chr3.4:15414372-15414391 | MS.gene057950:intron | 20.0% |
| !! | GATTGTAGATATTTATTTCA+AGG | - | chr3.4:15413431-15413450 | MS.gene057950:intron | 20.0% |
| !! | TCAAAATAATCATACAAAAG+TGG | + | chr3.4:15412889-15412908 | None:intergenic | 20.0% |
| !! | TTAAAATTAGTATACACTGA+CGG | + | chr3.4:15412655-15412674 | None:intergenic | 20.0% |
| !! | TTATGAAAACATTGTTAAAG+AGG | - | chr3.4:15412541-15412560 | MS.gene057950:CDS | 20.0% |
| !!! | AAATTATCAATGTAGTTTTC+AGG | + | chr3.4:15415043-15415062 | None:intergenic | 20.0% |
| !!! | ATAATATTTCTCTCTGTTTT+AGG | + | chr3.4:15413948-15413967 | None:intergenic | 20.0% |
| !!! | CTATAATTTAATCATTGGTT+TGG | - | chr3.4:15414850-15414869 | MS.gene057950:intron | 20.0% |
| !!! | GGAATTTAATTTGAAAGAAA+TGG | + | chr3.4:15414814-15414833 | None:intergenic | 20.0% |
| !!! | TCAGTTCAATTTTTAAAACA+TGG | + | chr3.4:15412612-15412631 | None:intergenic | 20.0% |
| !!! | TTTTGTTCTTTTATATTGCA+TGG | + | chr3.4:15415474-15415493 | None:intergenic | 20.0% |
| ! | AAAAAAAATTACCAGGAAGA+GGG | + | chr3.4:15412452-15412471 | None:intergenic | 25.0% |
| ! | AAATGGATCACATTTCAATT+GGG | + | chr3.4:15412780-15412799 | None:intergenic | 25.0% |
| ! | AACTGTGTCAAGAAATTATA+TGG | + | chr3.4:15414986-15415005 | None:intergenic | 25.0% |
| ! | ACCAAATGGTTAATTTCAAT+TGG | - | chr3.4:15412684-15412703 | MS.gene057950:CDS | 25.0% |
| ! | AGAACAAAAATTTCAGTCAA+TGG | - | chr3.4:15415485-15415504 | MS.gene057950:intron | 25.0% |
| ! | AGACATAATCTAAGCTATAA+TGG | - | chr3.4:15416040-15416059 | MS.gene057950:intron | 25.0% |
| ! | ATCCATTTGCATTTATTTGT+AGG | - | chr3.4:15412792-15412811 | MS.gene057950:CDS | 25.0% |
| ! | ATTATACACAATAGAAGAGA+GGG | - | chr3.4:15413686-15413705 | MS.gene057950:intron | 25.0% |
| ! | ATTTGTTTGATTGAGGAAAT+GGG | - | chr3.4:15412506-15412525 | MS.gene057950:CDS | 25.0% |
| ! | CATTTATTTGTAGGAACTAA+AGG | - | chr3.4:15412801-15412820 | MS.gene057950:CDS | 25.0% |
| ! | CTTATATTGAGCAAATAGAT+TGG | - | chr3.4:15415366-15415385 | MS.gene057950:intron | 25.0% |
| ! | GATATTTATTTCAAGGTTTC+AGG | - | chr3.4:15413438-15413457 | MS.gene057950:intron | 25.0% |
| ! | GATGCATAAATAGCAAAAAA+TGG | + | chr3.4:15413254-15413273 | None:intergenic | 25.0% |
| ! | GCAAAATTAATTGAAGCTAA+TGG | - | chr3.4:15414371-15414390 | MS.gene057950:intron | 25.0% |
| ! | GGAAAGTGAAACAAAAAATA+AGG | - | chr3.4:15413882-15413901 | MS.gene057950:intron | 25.0% |
| ! | GTGTTATGATTAATATGGAA+TGG | - | chr3.4:15413821-15413840 | MS.gene057950:intron | 25.0% |
| ! | TAAAAAAAATTACCAGGAAG+AGG | + | chr3.4:15412453-15412472 | None:intergenic | 25.0% |
| ! | TAAGAGTAACTACGTAATTT+CGG | + | chr3.4:15413624-15413643 | None:intergenic | 25.0% |
| ! | TATAGTTACATGATATGAAC+TGG | + | chr3.4:15414835-15414854 | None:intergenic | 25.0% |
| ! | TATTTGTTTGATTGAGGAAA+TGG | - | chr3.4:15412505-15412524 | MS.gene057950:CDS | 25.0% |
| ! | TCAAACAATCTCTACTATTA+CGG | + | chr3.4:15413346-15413365 | None:intergenic | 25.0% |
| ! | TCCAATTGAAATTAACCATT+TGG | + | chr3.4:15412688-15412707 | None:intergenic | 25.0% |
| ! | TGAAGGTTTGAAAAGAAAAA+AGG | + | chr3.4:15414523-15414542 | None:intergenic | 25.0% |
| ! | TTAGAAAATAATGAAGTCCA+AGG | - | chr3.4:15415551-15415570 | MS.gene057950:intron | 25.0% |
| ! | TTCCTACAAATAAATGCAAA+TGG | + | chr3.4:15412797-15412816 | None:intergenic | 25.0% |
| !! | AGGTTATCTAAAATCTCTAA+AGG | + | chr3.4:15413601-15413620 | None:intergenic | 25.0% |
| !! | ATAAAGTTTGGAGTTGAAAT+TGG | - | chr3.4:15414417-15414436 | MS.gene057950:intron | 25.0% |
| !! | CATGATAATTCTGAAAATGT+AGG | - | chr3.4:15415593-15415612 | MS.gene057950:intron | 25.0% |
| !! | CATTTTATATAACTGCATTC+AGG | + | chr3.4:15413542-15413561 | None:intergenic | 25.0% |
| !! | GTCAGTGTATACTAATTTTA+AGG | - | chr3.4:15412654-15412673 | MS.gene057950:CDS | 25.0% |
| !! | GTTCTTTATTTGTTTGATTG+AGG | - | chr3.4:15412499-15412518 | MS.gene057950:CDS | 25.0% |
| !! | TCTCTTGTAAAAGAGTATAA+TGG | + | chr3.4:15412748-15412767 | None:intergenic | 25.0% |
| !!! | ACATAATTGGTTTGTTGTAT+AGG | - | chr3.4:15414911-15414930 | MS.gene057950:intron | 25.0% |
| !!! | ACTTTCTATCATTTTGTTTC+CGG | - | chr3.4:15413003-15413022 | MS.gene057950:CDS | 25.0% |
| !!! | TTTTCAGGCATAAAAATTAC+AGG | + | chr3.4:15415028-15415047 | None:intergenic | 25.0% |
| AAAAAAATTACCAGGAAGAG+GGG | + | chr3.4:15412451-15412470 | None:intergenic | 30.0% | |
| AAAAACAGAGATGGGAAAAT+GGG | - | chr3.4:15414017-15414036 | MS.gene057950:intron | 30.0% | |
| AAAATGCCAAAAAACGTTAC+TGG | - | chr3.4:15415294-15415313 | MS.gene057950:intron | 30.0% | |
| AAATGCCAAAAAACGTTACT+GGG | - | chr3.4:15415295-15415314 | MS.gene057950:intron | 30.0% | |
| ATAATCAAACAGGTCATTAC+TGG | - | chr3.4:15416083-15416102 | MS.gene057950:CDS | 30.0% | |
| ATAGTAGTCAAGTAGTTAAG+AGG | - | chr3.4:15413649-15413668 | MS.gene057950:intron | 30.0% | |
| ATTCTCTTGTTCTTCTTCAT+CGG | + | chr3.4:15415450-15415469 | None:intergenic | 30.0% | |
| ATTTGCTCAATATAAGCATC+TGG | + | chr3.4:15415362-15415381 | None:intergenic | 30.0% | |
| CAAAAGATCAATGCAGTATT+AGG | - | chr3.4:15414491-15414510 | MS.gene057950:intron | 30.0% | |
| CAAATGGATCACATTTCAAT+TGG | + | chr3.4:15412781-15412800 | None:intergenic | 30.0% | |
| CAATATTTCTTCTCCCATAA+TGG | + | chr3.4:15415164-15415183 | None:intergenic | 30.0% | |
| CACGAATTCATATTATCAAG+CGG | - | chr3.4:15414257-15414276 | MS.gene057950:intron | 30.0% | |
| CATTATACACAATAGAAGAG+AGG | - | chr3.4:15413685-15413704 | MS.gene057950:intron | 30.0% | |
| CTAATTCCTTTATCAGTTCA+GGG | + | chr3.4:15415406-15415425 | None:intergenic | 30.0% | |
| GCTCGAAAATTTAAACCTTA+AGG | + | chr3.4:15413134-15413153 | None:intergenic | 30.0% | |
| TAAACAATACAAGATAGCAG+AGG | - | chr3.4:15414673-15414692 | MS.gene057950:intron | 30.0% | |
| TAAGACAAGGTGAAAACTTT+GGG | - | chr3.4:15414547-15414566 | MS.gene057950:intron | 30.0% | |
| TAATTTCTTGACACAGTTTG+TGG | - | chr3.4:15414988-15415007 | MS.gene057950:intron | 30.0% | |
| TAGTAGTCAAGTAGTTAAGA+GGG | - | chr3.4:15413650-15413669 | MS.gene057950:intron | 30.0% | |
| TATTGTTGGGTAATTGTGTT+GGG | - | chr3.4:15412579-15412598 | MS.gene057950:CDS | 30.0% | |
| TCACAGTTTAGAAGGAATAA+TGG | - | chr3.4:15415965-15415984 | MS.gene057950:intron | 30.0% | |
| TCGAATAATTTGGCTAATAG+TGG | - | chr3.4:15415821-15415840 | MS.gene057950:intron | 30.0% | |
| TCTAATTCCTTTATCAGTTC+AGG | + | chr3.4:15415407-15415426 | None:intergenic | 30.0% | |
| TTAAGACAAGGTGAAAACTT+TGG | - | chr3.4:15414546-15414565 | MS.gene057950:intron | 30.0% | |
| TTAATGAATGCTCTTGTGTT+GGG | + | chr3.4:15414290-15414309 | None:intergenic | 30.0% | |
| TTATACACAATAGAAGAGAG+GGG | - | chr3.4:15413687-15413706 | MS.gene057950:intron | 30.0% | |
| TTATTGTTGGGTAATTGTGT+TGG | - | chr3.4:15412578-15412597 | MS.gene057950:CDS | 30.0% | |
| TTTAATGAATGCTCTTGTGT+TGG | + | chr3.4:15414291-15414310 | None:intergenic | 30.0% | |
| TTTCAAACATGTTAGACTTC+CGG | - | chr3.4:15415126-15415145 | MS.gene057950:intron | 30.0% | |
| ! | AAGTTTTCACCTTGTCTTAA+AGG | + | chr3.4:15414546-15414565 | None:intergenic | 30.0% |
| ! | AGATTTGTCGTTGTTATTGT+TGG | - | chr3.4:15412565-15412584 | MS.gene057950:CDS | 30.0% |
| ! | ATTTTGTTGGTCGTAAAAGA+GGG | - | chr3.4:15413917-15413936 | MS.gene057950:intron | 30.0% |
| ! | CACTTCAATGTCATTTCATT+AGG | + | chr3.4:15414340-15414359 | None:intergenic | 30.0% |
| ! | GATTTGTCGTTGTTATTGTT+GGG | - | chr3.4:15412566-15412585 | MS.gene057950:CDS | 30.0% |
| ! | TACTCTTTTACAAGAGAAAC+TGG | - | chr3.4:15412751-15412770 | MS.gene057950:CDS | 30.0% |
| ! | TATAGATCCAATAATGGAAG+AGG | - | chr3.4:15413965-15413984 | MS.gene057950:intron | 30.0% |
| ! | TTCTGAAAATGTAGGAACTA+CGG | - | chr3.4:15415601-15415620 | MS.gene057950:intron | 30.0% |
| !! | GCAATTCATACTCTAAAACA+GGG | - | chr3.4:15414779-15414798 | MS.gene057950:intron | 30.0% |
| !! | TGCAATTCATACTCTAAAAC+AGG | - | chr3.4:15414778-15414797 | MS.gene057950:intron | 30.0% |
| !!! | TTATTTTGAAACTGACAGTG+TGG | - | chr3.4:15412900-15412919 | MS.gene057950:CDS | 30.0% |
| AAAACTCAGTACATTGCATC+TGG | + | chr3.4:15415097-15415116 | None:intergenic | 35.0% | |
| AAGAAATATTGCACGTTGAG+TGG | - | chr3.4:15415173-15415192 | MS.gene057950:intron | 35.0% | |
| AAGACAAGGTGAAAACTTTG+GGG | - | chr3.4:15414548-15414567 | MS.gene057950:intron | 35.0% | |
| AAGCAAAGCAAAAACAGAGA+TGG | - | chr3.4:15414008-15414027 | MS.gene057950:intron | 35.0% | |
| AAGGATTAACTGACAATGCT+TGG | - | chr3.4:15415660-15415679 | MS.gene057950:intron | 35.0% | |
| AATAGTTCGAGAATAGAGAG+AGG | - | chr3.4:15414630-15414649 | MS.gene057950:intron | 35.0% | |
| AATGTAATTCCGATGAACAC+AGG | - | chr3.4:15415875-15415894 | MS.gene057950:intron | 35.0% | |
| AATTATCATGATAATCCGCC+TGG | + | chr3.4:15415583-15415602 | None:intergenic | 35.0% | |
| AGAGTATGAATTGCAGAACT+TGG | + | chr3.4:15414773-15414792 | None:intergenic | 35.0% | |
| AGCAAAGCAAAAACAGAGAT+GGG | - | chr3.4:15414009-15414028 | MS.gene057950:intron | 35.0% | |
| AGGATTAACTGACAATGCTT+GGG | - | chr3.4:15415661-15415680 | MS.gene057950:intron | 35.0% | |
| AGTCAATGGTGAAAATCCAT+GGG | - | chr3.4:15415499-15415518 | MS.gene057950:intron | 35.0% | |
| ATAACAATCTGTGTAGTGGT+TGG | - | chr3.4:15415729-15415748 | MS.gene057950:intron | 35.0% | |
| ATAGTTCGAGAATAGAGAGA+GGG | - | chr3.4:15414631-15414650 | MS.gene057950:intron | 35.0% | |
| ATATCGTAGAAAATGGAAGG+AGG | + | chr3.4:15412423-15412442 | None:intergenic | 35.0% | |
| ATTCATGCCTCTTCCATTAT+TGG | + | chr3.4:15413975-15413994 | None:intergenic | 35.0% | |
| CAAAAACAGAGATGGGAAAA+TGG | - | chr3.4:15414016-15414035 | MS.gene057950:intron | 35.0% | |
| CAAAGGGATGATAATCAAAC+AGG | - | chr3.4:15416073-15416092 | MS.gene057950:CDS | 35.0% | |
| CAGTTTAGAAGGAATAATGG+AGG | - | chr3.4:15415968-15415987 | MS.gene057950:intron | 35.0% | |
| CTGATATCGTAGAAAATGGA+AGG | + | chr3.4:15412426-15412445 | None:intergenic | 35.0% | |
| CTTACAGACAGATAAAGGAT+GGG | - | chr3.4:15415763-15415782 | MS.gene057950:intron | 35.0% | |
| GATCATAACAATCTGTGTAG+TGG | - | chr3.4:15415725-15415744 | MS.gene057950:intron | 35.0% | |
| GTTTGATTATCATCCCTTTG+AGG | + | chr3.4:15416073-15416092 | None:intergenic | 35.0% | |
| TAATCCTTGATTTCCACGAA+TGG | + | chr3.4:15415648-15415667 | None:intergenic | 35.0% | |
| TAGAAAATGGAAGGAGGATT+AGG | + | chr3.4:15412417-15412436 | None:intergenic | 35.0% | |
| TAGCCAAATTATTCGACTTC+TGG | + | chr3.4:15415817-15415836 | None:intergenic | 35.0% | |
| TATGAATTGCAGAACTTGGA+GGG | + | chr3.4:15414769-15414788 | None:intergenic | 35.0% | |
| TATTGACCCTGAACTGATAA+AGG | - | chr3.4:15415397-15415416 | MS.gene057950:intron | 35.0% | |
| TCAATATAAGCATCTGGATC+AGG | + | chr3.4:15415356-15415375 | None:intergenic | 35.0% | |
| TTACAGACAGATAAAGGATG+GGG | - | chr3.4:15415764-15415783 | MS.gene057950:intron | 35.0% | |
| TTCACCAGGTTTATAAAGCT+TGG | - | chr3.4:15413487-15413506 | MS.gene057950:intron | 35.0% | |
| TTCTCTTGTTCTTCTTCATC+GGG | + | chr3.4:15415449-15415468 | None:intergenic | 35.0% | |
| ! | AAATAGGAGCCTTTTGACAT+TGG | - | chr3.4:15414732-15414751 | MS.gene057950:intron | 35.0% |
| ! | AACTAAAGGGTATGCATTGT+CGG | - | chr3.4:15412815-15412834 | MS.gene057950:CDS | 35.0% |
| ! | AATAGGAGCCTTTTGACATT+GGG | - | chr3.4:15414733-15414752 | MS.gene057950:intron | 35.0% |
| ! | CATTTTGTTGGTCGTAAAAG+AGG | - | chr3.4:15413916-15413935 | MS.gene057950:intron | 35.0% |
| ! | GTTAGCGAAGATCATTTTGT+TGG | - | chr3.4:15413904-15413923 | MS.gene057950:intron | 35.0% |
| ! | TAGTCTAAGTTGTTTGCTGA+AGG | - | chr3.4:15413101-15413120 | MS.gene057950:CDS | 35.0% |
| ! | TTAGAAGGAATAATGGAGGT+TGG | - | chr3.4:15415972-15415991 | MS.gene057950:intron | 35.0% |
| ! | TTTAAGGCTACATGACCAAA+TGG | - | chr3.4:15412670-15412689 | MS.gene057950:CDS | 35.0% |
| ! | TTTTGCCCAGTAACGTTTTT+TGG | + | chr3.4:15415303-15415322 | None:intergenic | 35.0% |
| !! | AAACCTTCACCTTTAAGACA+AGG | - | chr3.4:15414534-15414553 | MS.gene057950:intron | 35.0% |
| !! | CATTGCATCTGGTGTTATAA+TGG | + | chr3.4:15415086-15415105 | None:intergenic | 35.0% |
| !! | TAATCATTGGTTTGGTGCAT+AGG | - | chr3.4:15414858-15414877 | MS.gene057950:intron | 35.0% |
| !! | TATGTGGTTTGCTAGTAGAT+TGG | - | chr3.4:15413301-15413320 | MS.gene057950:CDS | 35.0% |
| !! | TTTTCATGTTGCTTCCATCT+TGG | + | chr3.4:15415926-15415945 | None:intergenic | 35.0% |
| !!! | TGGGTTTTGATTGAATGTCA+GGG | - | chr3.4:15412936-15412955 | MS.gene057950:CDS | 35.0% |
| AAGAACGAGTCCACAAGTTA+TGG | + | chr3.4:15414119-15414138 | None:intergenic | 40.0% | |
| AAGCTAATGGGAAGATATGC+AGG | - | chr3.4:15414384-15414403 | MS.gene057950:intron | 40.0% | |
| AAGGTGGTCATGATAAGTCT+AGG | - | chr3.4:15415684-15415703 | MS.gene057950:intron | 40.0% | |
| AATCAGTGATCCAATCCATG+AGG | + | chr3.4:15413224-15413243 | None:intergenic | 40.0% | |
| AATGGTGAAAAGGGAACTGA+GGG | - | chr3.4:15413861-15413880 | MS.gene057950:intron | 40.0% | |
| ACACGAAACAAAACGCTAGT+GGG | + | chr3.4:15413082-15413101 | None:intergenic | 40.0% | |
| ACGTTGACGATGTACATGAA+AGG | - | chr3.4:15412971-15412990 | MS.gene057950:CDS | 40.0% | |
| ACTATTACGGCATTCATGGA+AGG | + | chr3.4:15413333-15413352 | None:intergenic | 40.0% | |
| AGAAATTGAGGAGGCTGAAA+AGG | - | chr3.4:15413737-15413756 | MS.gene057950:intron | 40.0% | |
| AGACAAGGTGAAAACTTTGG+GGG | - | chr3.4:15414549-15414568 | MS.gene057950:intron | 40.0% | |
| AGCTAATGGGAAGATATGCA+GGG | - | chr3.4:15414385-15414404 | MS.gene057950:intron | 40.0% | |
| AGGAACTACGGATAATCCAT+GGG | - | chr3.4:15415613-15415632 | MS.gene057950:intron | 40.0% | |
| AGGTGGTCATGATAAGTCTA+GGG | - | chr3.4:15415685-15415704 | MS.gene057950:intron | 40.0% | |
| ATAATGGTATTCCATCGTGC+CGG | + | chr3.4:15415148-15415167 | None:intergenic | 40.0% | |
| ATCAAACAGGTCATTACTGG+AGG | - | chr3.4:15416086-15416105 | MS.gene057950:CDS | 40.0% | |
| ATCAGAGTTACCACCAAACA+CGG | - | chr3.4:15416005-15416024 | MS.gene057950:intron | 40.0% | |
| ATCAGGCAGAGAAATATCAC+AGG | + | chr3.4:15415339-15415358 | None:intergenic | 40.0% | |
| ATCAGTTCAGGGTCAATACA+AGG | + | chr3.4:15415395-15415414 | None:intergenic | 40.0% | |
| ATGAATTGCAGAACTTGGAG+GGG | + | chr3.4:15414768-15414787 | None:intergenic | 40.0% | |
| CAAGCGATTCACAGTTTAGA+AGG | - | chr3.4:15415957-15415976 | MS.gene057950:intron | 40.0% | |
| CAGTCAATGGTGAAAATCCA+TGG | - | chr3.4:15415498-15415517 | MS.gene057950:intron | 40.0% | |
| CCAAATTATTCGACTTCTGG+TGG | + | chr3.4:15415814-15415833 | None:intergenic | 40.0% | |
| CCACAATGTACTTGATTGGA+AGG | - | chr3.4:15415247-15415266 | MS.gene057950:intron | 40.0% | |
| CCACCAGAAGTCGAATAATT+TGG | - | chr3.4:15415811-15415830 | MS.gene057950:intron | 40.0% | |
| CCTTCCAATCAAGTACATTG+TGG | + | chr3.4:15415250-15415269 | None:intergenic | 40.0% | |
| CTCTACTATTACGGCATTCA+TGG | + | chr3.4:15413337-15413356 | None:intergenic | 40.0% | |
| GAAATTGAGGAGGCTGAAAA+GGG | - | chr3.4:15413738-15413757 | MS.gene057950:intron | 40.0% | |
| GAGGGAGCAAAGTAGAAAAA+GGG | - | chr3.4:15416108-15416127 | MS.gene057950:CDS | 40.0% | |
| GAGTAACTACGTAATTTCGG+AGG | + | chr3.4:15413621-15413640 | None:intergenic | 40.0% | |
| GCACGATGGAATACCATTAT+GGG | - | chr3.4:15415148-15415167 | MS.gene057950:intron | 40.0% | |
| GCGAAGTTAGGGATAATTCT+TGG | - | chr3.4:15415786-15415805 | MS.gene057950:intron | 40.0% | |
| GCTTACAGACAGATAAAGGA+TGG | - | chr3.4:15415762-15415781 | MS.gene057950:intron | 40.0% | |
| GGATGCTTACAGACAGATAA+AGG | - | chr3.4:15415758-15415777 | MS.gene057950:intron | 40.0% | |
| GTACTTGATTGGAAGGATTC+AGG | - | chr3.4:15415254-15415273 | MS.gene057950:intron | 40.0% | |
| GTATGAATTGCAGAACTTGG+AGG | + | chr3.4:15414770-15414789 | None:intergenic | 40.0% | |
| GTCACCACAATGTACTTGAT+TGG | - | chr3.4:15415243-15415262 | MS.gene057950:intron | 40.0% | |
| GTGACAGTAGATCAACTCTT+TGG | + | chr3.4:15415228-15415247 | None:intergenic | 40.0% | |
| TAAAAGGCGGGAAGAAATTG+AGG | - | chr3.4:15413725-15413744 | MS.gene057950:intron | 40.0% | |
| TAATGGTGAAAAGGGAACTG+AGG | - | chr3.4:15413860-15413879 | MS.gene057950:intron | 40.0% | |
| TAATTCCGATGAACACAGGA+TGG | - | chr3.4:15415879-15415898 | MS.gene057950:intron | 40.0% | |
| TACACGAAACAAAACGCTAG+TGG | + | chr3.4:15413083-15413102 | None:intergenic | 40.0% | |
| TAGGAACTACGGATAATCCA+TGG | - | chr3.4:15415612-15415631 | MS.gene057950:intron | 40.0% | |
| TCACCTTGTCTTAAAGGTGA+AGG | + | chr3.4:15414540-15414559 | None:intergenic | 40.0% | |
| TCAGGCAGAGAAATATCACA+GGG | + | chr3.4:15415338-15415357 | None:intergenic | 40.0% | |
| TCTCTTGTTCTTCTTCATCG+GGG | + | chr3.4:15415448-15415467 | None:intergenic | 40.0% | |
| TTAACTGACAATGCTTGGGA+AGG | - | chr3.4:15415665-15415684 | MS.gene057950:intron | 40.0% | |
| TTTCTCCATCCTGTGTTCAT+CGG | + | chr3.4:15415887-15415906 | None:intergenic | 40.0% | |
| ! | AAGGCCAAGCTTTATAAACC+TGG | + | chr3.4:15413494-15413513 | None:intergenic | 40.0% |
| ! | AATAATGGAGGTTGGAACTC+TGG | - | chr3.4:15415980-15415999 | MS.gene057950:intron | 40.0% |
| ! | ATAATGGAGGTTGGAACTCT+GGG | - | chr3.4:15415981-15416000 | MS.gene057950:intron | 40.0% |
| ! | GGCTCTGATATCGTAGAAAA+TGG | + | chr3.4:15412430-15412449 | None:intergenic | 40.0% |
| ! | GGGGTGTTTCAGATAAAGTT+TGG | - | chr3.4:15414405-15414424 | MS.gene057950:intron | 40.0% |
| ! | TAATGGATCTCAGCCTCAAA+GGG | - | chr3.4:15416057-15416076 | MS.gene057950:CDS | 40.0% |
| ! | TCTTAATGGATCGAAGCAAG+AGG | + | chr3.4:15413410-15413429 | None:intergenic | 40.0% |
| !! | AAGTTACGATGGTGGATGAT+GGG | + | chr3.4:15414199-15414218 | None:intergenic | 40.0% |
| !! | ATAATGGATCTCAGCCTCAA+AGG | - | chr3.4:15416056-15416075 | MS.gene057950:CDS | 40.0% |
| !! | CTAGCAGGTTTGAGTTTTAG+AGG | - | chr3.4:15414079-15414098 | MS.gene057950:intron | 40.0% |
| !! | CTCTAAAACTCAAACCTGCT+AGG | + | chr3.4:15414081-15414100 | None:intergenic | 40.0% |
| !! | GCATTGATCTTTTGCAGTTC+CGG | + | chr3.4:15414485-15414504 | None:intergenic | 40.0% |
| !! | TGATGGGCTAATGGTGAAAA+GGG | - | chr3.4:15413852-15413871 | MS.gene057950:intron | 40.0% |
| !!! | GTGGGTTTTGATTGAATGTC+AGG | - | chr3.4:15412935-15412954 | MS.gene057950:CDS | 40.0% |
| AAACAGGTCATTACTGGAGG+AGG | - | chr3.4:15416089-15416108 | MS.gene057950:CDS | 45.0% | |
| AAATGTCCAGAACTCGCATC+CGG | + | chr3.4:15413025-15413044 | None:intergenic | 45.0% | |
| AACACAGGATGGAGAAACAG+TGG | - | chr3.4:15415890-15415909 | MS.gene057950:intron | 45.0% | |
| AACAGGTCATTACTGGAGGA+GGG | - | chr3.4:15416090-15416109 | MS.gene057950:CDS | 45.0% | |
| AAGGGAATCACGTAAAAGGC+GGG | - | chr3.4:15413713-15413732 | MS.gene057950:intron | 45.0% | |
| AAGTCTAGGGGTTGGAATGA+AGG | - | chr3.4:15415698-15415717 | MS.gene057950:intron | 45.0% | |
| AATAGAAGAGAGGGGAGGAA+GGG | - | chr3.4:15413695-15413714 | MS.gene057950:intron | 45.0% | |
| AGATAGCAGAGGAGAGAAAG+AGG | - | chr3.4:15414684-15414703 | MS.gene057950:intron | 45.0% | |
| ATAAAGGATGGGGCGAAGTT+AGG | - | chr3.4:15415774-15415793 | MS.gene057950:intron | 45.0% | |
| ATGCACCTCCCAATGTCAAA+AGG | + | chr3.4:15414744-15414763 | None:intergenic | 45.0% | |
| ATGGAATGGAAAGAGCCTGA+TGG | - | chr3.4:15413835-15413854 | MS.gene057950:intron | 45.0% | |
| ATTGAACTGAGCTGTCTGTG+AGG | - | chr3.4:15412622-15412641 | MS.gene057950:CDS | 45.0% | |
| CTCTTGATCTTGCATTCACC+AGG | - | chr3.4:15413473-15413492 | MS.gene057950:intron | 45.0% | |
| CTGTCCTCAGCAAGAAAACA+AGG | + | chr3.4:15413513-15413532 | None:intergenic | 45.0% | |
| CTGTGTAGTGGTTGGAATTC+TGG | - | chr3.4:15415737-15415756 | MS.gene057950:intron | 45.0% | |
| GAAGGGAATCACGTAAAAGG+CGG | - | chr3.4:15413712-15413731 | MS.gene057950:intron | 45.0% | |
| GAATGTGCTGCAACATCTGT+TGG | - | chr3.4:15415521-15415540 | MS.gene057950:intron | 45.0% | |
| GAGGAAGGGAATCACGTAAA+AGG | - | chr3.4:15413709-15413728 | MS.gene057950:intron | 45.0% | |
| GATAGGAAACAAGTGGCTGA+TGG | - | chr3.4:15413774-15413793 | MS.gene057950:intron | 45.0% | |
| GCAGAGAAATATCACAGGGA+AGG | + | chr3.4:15415334-15415353 | None:intergenic | 45.0% | |
| GCTAATAGTGGCAACTCTTG+GGG | - | chr3.4:15415833-15415852 | MS.gene057950:intron | 45.0% | |
| GCTAATGGGAAGATATGCAG+GGG | - | chr3.4:15414386-15414405 | MS.gene057950:intron | 45.0% | |
| GGAGGGAGCAAAGTAGAAAA+AGG | - | chr3.4:15416107-15416126 | MS.gene057950:CDS | 45.0% | |
| GGCACGATGGAATACCATTA+TGG | - | chr3.4:15415147-15415166 | MS.gene057950:intron | 45.0% | |
| GGCTAATAGTGGCAACTCTT+GGG | - | chr3.4:15415832-15415851 | MS.gene057950:intron | 45.0% | |
| GGTGGTCATGATAAGTCTAG+GGG | - | chr3.4:15415686-15415705 | MS.gene057950:intron | 45.0% | |
| GTCATGATAAGTCTAGGGGT+TGG | - | chr3.4:15415690-15415709 | MS.gene057950:intron | 45.0% | |
| GTGGAACAAATGTGCCAAGA+TGG | - | chr3.4:15415909-15415928 | MS.gene057950:intron | 45.0% | |
| TAAAGGATGGGGCGAAGTTA+GGG | - | chr3.4:15415775-15415794 | MS.gene057950:intron | 45.0% | |
| TACACAATAGAAGAGAGGGG+AGG | - | chr3.4:15413690-15413709 | MS.gene057950:intron | 45.0% | |
| TAGGGGTTGGAATGAAGGAA+GGG | - | chr3.4:15415703-15415722 | MS.gene057950:intron | 45.0% | |
| TATTAGAGCCTACCCGTGTT+TGG | + | chr3.4:15416021-15416040 | None:intergenic | 45.0% | |
| TCAAAACCCACCATTCTACC+AGG | + | chr3.4:15412926-15412945 | None:intergenic | 45.0% | |
| TCAGAGTTACCACCAAACAC+GGG | - | chr3.4:15416006-15416025 | MS.gene057950:intron | 45.0% | |
| TGAAGTCCAAGGACAAAACC+AGG | - | chr3.4:15415562-15415581 | MS.gene057950:intron | 45.0% | |
| TGGAATGGAAAGAGCCTGAT+GGG | - | chr3.4:15413836-15413855 | MS.gene057950:intron | 45.0% | |
| TGGCTAATAGTGGCAACTCT+TGG | - | chr3.4:15415831-15415850 | MS.gene057950:intron | 45.0% | |
| ! | AGTGCCATTCGTGGAAATCA+AGG | - | chr3.4:15415641-15415660 | MS.gene057950:intron | 45.0% |
| ! | CTTTTCACCATTAGCCCATC+AGG | + | chr3.4:15413853-15413872 | None:intergenic | 45.0% |
| ! | GACTCGTTCTTTTGCAGCAT+GGG | - | chr3.4:15414128-15414147 | MS.gene057950:intron | 45.0% |
| ! | GTTTGATGATCACACCTAGC+AGG | - | chr3.4:15414064-15414083 | MS.gene057950:intron | 45.0% |
| ! | TGTTTTCTTGCTGAGGACAG+AGG | - | chr3.4:15413513-15413532 | MS.gene057950:intron | 45.0% |
| !! | CTGATGGGCTAATGGTGAAA+AGG | - | chr3.4:15413851-15413870 | MS.gene057950:intron | 45.0% |
| !! | GAAGTTACGATGGTGGATGA+TGG | + | chr3.4:15414200-15414219 | None:intergenic | 45.0% |
| !!! | TTGGCCTTGTTTTCTTGCTG+AGG | - | chr3.4:15413506-15413525 | MS.gene057950:intron | 45.0% |
| AAGGCGGGAAGAAATTGAGG+AGG | - | chr3.4:15413728-15413747 | MS.gene057950:intron | 50.0% | |
| ACACACTCTTACCCTGCAAG+TGG | + | chr3.4:15413164-15413183 | None:intergenic | 50.0% | |
| ACCATCGTAACTTCCAGACG+CGG | - | chr3.4:15414206-15414225 | MS.gene057950:intron | 50.0% | |
| ACTGACAATGCTTGGGAAGG+TGG | - | chr3.4:15415668-15415687 | MS.gene057950:intron | 50.0% | |
| AGTCCAAGGACAAAACCAGG+CGG | - | chr3.4:15415565-15415584 | MS.gene057950:intron | 50.0% | |
| AGTTACCACCAAACACGGGT+AGG | - | chr3.4:15416010-15416029 | MS.gene057950:intron | 50.0% | |
| ATGAGGCTCTCACCAAGTTC+GGG | + | chr3.4:15413207-15413226 | None:intergenic | 50.0% | |
| ATGTTAGACTTCCGGCACGA+TGG | - | chr3.4:15415134-15415153 | MS.gene057950:intron | 50.0% | |
| CAATAGAAGAGAGGGGAGGA+AGG | - | chr3.4:15413694-15413713 | MS.gene057950:intron | 50.0% | |
| CATGAGGCTCTCACCAAGTT+CGG | + | chr3.4:15413208-15413227 | None:intergenic | 50.0% | |
| CGTTGAGTGGATGTGTAGCA+TGG | - | chr3.4:15415186-15415205 | MS.gene057950:intron | 50.0% | |
| CTAGGGGTTGGAATGAAGGA+AGG | - | chr3.4:15415702-15415721 | MS.gene057950:intron | 50.0% | |
| GAGTCCACAAGTTATGGCCA+CGG | + | chr3.4:15414113-15414132 | None:intergenic | 50.0% | |
| GATGTTGCAGCACATTCCCA+TGG | + | chr3.4:15415518-15415537 | None:intergenic | 50.0% | |
| GGAATTATCGTCCATCGCGT+AGG | - | chr3.4:15412376-15412395 | MS.gene057950:CDS | 50.0% | |
| GGAGGAGGATAGGAAACAAG+TGG | - | chr3.4:15413767-15413786 | MS.gene057950:intron | 50.0% | |
| GGGGTAATGTAGCAAAGCAG+TGG | + | chr3.4:15412868-15412887 | None:intergenic | 50.0% | |
| TAACTTCCAGACGCGGTTTG+TGG | - | chr3.4:15414213-15414232 | MS.gene057950:intron | 50.0% | |
| TTGAAACTGACAGTGTGGCC+TGG | - | chr3.4:15412905-15412924 | MS.gene057950:CDS | 50.0% | |
| TTGCAGTTCCGGCTGCAAAT+AGG | + | chr3.4:15414474-15414493 | None:intergenic | 50.0% | |
| TTGGTGAGAGCCTCATGGAT+TGG | - | chr3.4:15413211-15413230 | MS.gene057950:CDS | 50.0% | |
| TTGTTTCCGGATGCGAGTTC+TGG | - | chr3.4:15413016-15413035 | MS.gene057950:CDS | 50.0% | |
| ! | AGGAGCCTTTTGACATTGGG+AGG | - | chr3.4:15414736-15414755 | MS.gene057950:intron | 50.0% |
| ! | CGTTCTTTTGCAGCATGGGA+TGG | - | chr3.4:15414132-15414151 | MS.gene057950:intron | 50.0% |
| ! | GGACTCGTTCTTTTGCAGCA+TGG | - | chr3.4:15414127-15414146 | MS.gene057950:intron | 50.0% |
| !! | GAAAGAGCCTGATGGGCTAA+TGG | - | chr3.4:15413843-15413862 | MS.gene057950:intron | 50.0% |
| !! | TTTTAGAGGATCCACCACCG+TGG | - | chr3.4:15414093-15414112 | MS.gene057950:intron | 50.0% |
| !!! | AATCCGCCTGGTTTTGTCCT+TGG | + | chr3.4:15415571-15415590 | None:intergenic | 50.0% |
| ACAAGTTATGGCCACGGTGG+TGG | + | chr3.4:15414107-15414126 | None:intergenic | 55.0% | |
| ACCACCGTGGCCATAACTTG+TGG | - | chr3.4:15414106-15414125 | MS.gene057950:intron | 55.0% | |
| ACCGCGTCTGGAAGTTACGA+TGG | + | chr3.4:15414210-15414229 | None:intergenic | 55.0% | |
| AGTGTGGCCTGGTAGAATGG+TGG | - | chr3.4:15412916-15412935 | MS.gene057950:CDS | 55.0% | |
| CGAATGGCACTACTCTCCCA+TGG | + | chr3.4:15415632-15415651 | None:intergenic | 55.0% | |
| CTACGACGAAACCTACGCGA+TGG | + | chr3.4:15412390-15412409 | None:intergenic | 55.0% | |
| GACAGTGTGGCCTGGTAGAA+TGG | - | chr3.4:15412913-15412932 | MS.gene057950:CDS | 55.0% | |
| GAGCAGTCTCTCCACTTGCA+GGG | - | chr3.4:15413150-15413169 | MS.gene057950:CDS | 55.0% | |
| GATATCAGAGCCCCTCTTCC+TGG | - | chr3.4:15412438-15412457 | MS.gene057950:CDS | 55.0% | |
| GCGTCTGGAAGTTACGATGG+TGG | + | chr3.4:15414207-15414226 | None:intergenic | 55.0% | |
| GCTGCAACATCTGTTGGCAG+AGG | - | chr3.4:15415527-15415546 | MS.gene057950:intron | 55.0% | |
| GGTTTGTGGTGCAAGGACGT+AGG | - | chr3.4:15414227-15414246 | MS.gene057950:intron | 55.0% | |
| GTGTGGCCTGGTAGAATGGT+GGG | - | chr3.4:15412917-15412936 | MS.gene057950:CDS | 55.0% | |
| TAGAGCCTACCCGTGTTTGG+TGG | + | chr3.4:15416018-15416037 | None:intergenic | 55.0% | |
| TCACCAAGTTCGGGGGGTTA+GGG | + | chr3.4:15413198-15413217 | None:intergenic | 55.0% | |
| TCAGTGCGCCTATTTGCAGC+CGG | - | chr3.4:15414463-15414482 | MS.gene057950:intron | 55.0% | |
| TCCACAAGTTATGGCCACGG+TGG | + | chr3.4:15414110-15414129 | None:intergenic | 55.0% | |
| TGAGGAGGCTGAAAAGGGTG+CGG | - | chr3.4:15413743-15413762 | MS.gene057950:intron | 55.0% | |
| TGAGGCTCTCACCAAGTTCG+GGG | + | chr3.4:15413206-15413225 | None:intergenic | 55.0% | |
| TTGCAGCATGGGATGGATCG+TGG | - | chr3.4:15414139-15414158 | MS.gene057950:intron | 55.0% | |
| ! | CGAACTTGGTGAGAGCCTCA+TGG | - | chr3.4:15413206-15413225 | MS.gene057950:CDS | 55.0% |
| ! | GCTGAAGGCATGCTGCCTTA+AGG | - | chr3.4:15413116-15413135 | MS.gene057950:CDS | 55.0% |
| ! | TGGGAGAGTAGTGCCATTCG+TGG | - | chr3.4:15415632-15415651 | MS.gene057950:intron | 55.0% |
| AGGCTCTCACCAAGTTCGGG+GGG | + | chr3.4:15413204-15413223 | None:intergenic | 60.0% | |
| CAAGTTCGGGGGGTTAGGGA+GGG | + | chr3.4:15413194-15413213 | None:intergenic | 60.0% | |
| CAGACGCGGTTTGTGGTGCA+AGG | - | chr3.4:15414220-15414239 | MS.gene057950:intron | 60.0% | |
| CGAGCAGTCTCTCCACTTGC+AGG | - | chr3.4:15413149-15413168 | MS.gene057950:CDS | 60.0% | |
| CTCACCAAGTTCGGGGGGTT+AGG | + | chr3.4:15413199-15413218 | None:intergenic | 60.0% | |
| CTTGCACCACAAACCGCGTC+TGG | + | chr3.4:15414222-15414241 | None:intergenic | 60.0% | |
| GAGGCTCTCACCAAGTTCGG+GGG | + | chr3.4:15413205-15413224 | None:intergenic | 60.0% | |
| ! | AGGAGGCTGAAAAGGGTGCG+GGG | - | chr3.4:15413745-15413764 | MS.gene057950:intron | 60.0% |
| ! | GAGGAGGCTGAAAAGGGTGC+GGG | - | chr3.4:15413744-15413763 | MS.gene057950:intron | 60.0% |
| CCAAGTTCGGGGGGTTAGGG+AGG | + | chr3.4:15413195-15413214 | None:intergenic | 65.0% | |
| CCTCCCTAACCCCCCGAACT+TGG | - | chr3.4:15413192-15413211 | MS.gene057950:CDS | 65.0% | |
| ! | GGAGGCTGAAAAGGGTGCGG+GGG | - | chr3.4:15413746-15413765 | MS.gene057950:intron | 65.0% |
| ! | TGAAAAGGGTGCGGGGGAGG+AGG | - | chr3.4:15413752-15413771 | MS.gene057950:intron | 65.0% |
| AGGGTGCGGGGGAGGAGGAT+AGG | - | chr3.4:15413757-15413776 | MS.gene057950:intron | 70.0% | |
| ! | GGCTGAAAAGGGTGCGGGGG+AGG | - | chr3.4:15413749-15413768 | MS.gene057950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 15412366 | 15416144 | 15412366 | ID=MS.gene057950 |
| chr3.4 | mRNA | 15412366 | 15416144 | 15412366 | ID=MS.gene057950.t1;Parent=MS.gene057950 |
| chr3.4 | exon | 15416051 | 15416144 | 15416051 | ID=MS.gene057950.t1.exon1;Parent=MS.gene057950.t1 |
| chr3.4 | CDS | 15416051 | 15416144 | 15416051 | ID=cds.MS.gene057950.t1;Parent=MS.gene057950.t1 |
| chr3.4 | exon | 15412366 | 15413369 | 15412366 | ID=MS.gene057950.t1.exon2;Parent=MS.gene057950.t1 |
| chr3.4 | CDS | 15412366 | 15413369 | 15412366 | ID=cds.MS.gene057950.t1;Parent=MS.gene057950.t1 |
| Gene Sequence |
| Protein sequence |
