Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058005.t1 | XP_003608633.1 | 95.9 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 3.70E-178 | 634 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058005.t1 | O49697 | 61.8 | 246 | 82 | 4 | 1 | 242 | 1 | 238 | 1.5e-79 | 297.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058005.t1 | G7JGH7 | 95.9 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 2.6e-178 | 634.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene058005.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058005 | MS.gene46348 | 0.965957 | 2.78E-125 | -1.69E-46 |
MS.gene058005 | MS.gene48312 | 0.802027 | 6.82E-49 | -1.69E-46 |
MS.gene058005 | MS.gene60394 | 0.833777 | 4.39E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058005.t1 | MTR_4g098630 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 638 |
MS.gene058005.t1 | MTR_5g014300 | 60.870 | 345 | 98 | 9 | 1 | 318 | 1 | 335 | 2.89e-135 | 387 |
MS.gene058005.t1 | MTR_6g477900 | 65.806 | 155 | 50 | 1 | 6 | 160 | 6 | 157 | 7.64e-70 | 217 |
MS.gene058005.t1 | MTR_5g076850 | 61.006 | 159 | 59 | 1 | 1 | 159 | 1 | 156 | 1.08e-63 | 213 |
MS.gene058005.t1 | MTR_3g064580 | 54.255 | 188 | 71 | 4 | 6 | 191 | 6 | 180 | 1.28e-63 | 213 |
MS.gene058005.t1 | MTR_2g064090 | 59.627 | 161 | 61 | 2 | 1 | 160 | 1 | 158 | 1.46e-63 | 204 |
MS.gene058005.t1 | MTR_5g021710 | 45.500 | 200 | 97 | 5 | 6 | 204 | 8 | 196 | 8.15e-53 | 177 |
MS.gene058005.t1 | MTR_1g097300 | 56.579 | 152 | 63 | 1 | 8 | 159 | 21 | 169 | 2.02e-52 | 181 |
MS.gene058005.t1 | MTR_1g096430 | 50.307 | 163 | 75 | 3 | 4 | 165 | 5 | 162 | 6.26e-51 | 172 |
MS.gene058005.t1 | MTR_4g036030 | 49.708 | 171 | 75 | 4 | 6 | 175 | 7 | 167 | 3.42e-50 | 170 |
MS.gene058005.t1 | MTR_8g076110 | 49.068 | 161 | 76 | 3 | 1 | 160 | 1 | 156 | 6.04e-50 | 168 |
MS.gene058005.t1 | MTR_3g096140 | 48.171 | 164 | 82 | 1 | 2 | 165 | 3 | 163 | 1.46e-49 | 166 |
MS.gene058005.t1 | MTR_3g093040 | 51.534 | 163 | 74 | 3 | 6 | 167 | 108 | 266 | 1.60e-49 | 167 |
MS.gene058005.t1 | MTR_2g086880 | 46.701 | 197 | 86 | 6 | 8 | 199 | 20 | 202 | 1.61e-49 | 172 |
MS.gene058005.t1 | MTR_7g085220 | 45.856 | 181 | 82 | 4 | 6 | 176 | 8 | 182 | 2.18e-49 | 168 |
MS.gene058005.t1 | MTR_5g069030 | 55.346 | 159 | 66 | 3 | 6 | 163 | 25 | 179 | 2.73e-49 | 174 |
MS.gene058005.t1 | MTR_4g101680 | 46.237 | 186 | 90 | 4 | 6 | 186 | 7 | 187 | 3.05e-49 | 168 |
MS.gene058005.t1 | MTR_2g086880 | 46.701 | 197 | 86 | 6 | 8 | 199 | 20 | 202 | 3.21e-49 | 173 |
MS.gene058005.t1 | MTR_5g012080 | 43.878 | 196 | 93 | 5 | 6 | 196 | 7 | 190 | 3.50e-49 | 167 |
MS.gene058005.t1 | MTR_3g093050 | 53.374 | 163 | 71 | 3 | 6 | 167 | 22 | 180 | 6.83e-49 | 172 |
MS.gene058005.t1 | MTR_8g063550 | 48.750 | 160 | 79 | 1 | 6 | 165 | 6 | 162 | 1.04e-48 | 166 |
MS.gene058005.t1 | MTR_3g093050 | 53.374 | 163 | 71 | 3 | 6 | 167 | 22 | 180 | 1.11e-48 | 172 |
MS.gene058005.t1 | MTR_3g096140 | 34.395 | 314 | 179 | 8 | 2 | 309 | 3 | 295 | 1.22e-48 | 166 |
MS.gene058005.t1 | MTR_2g079990 | 46.328 | 177 | 90 | 2 | 6 | 182 | 16 | 187 | 1.49e-48 | 166 |
MS.gene058005.t1 | MTR_2g062730 | 49.412 | 170 | 74 | 5 | 1 | 164 | 2 | 165 | 1.99e-48 | 165 |
MS.gene058005.t1 | MTR_4g108760 | 48.214 | 168 | 80 | 3 | 6 | 171 | 17 | 179 | 3.96e-48 | 165 |
MS.gene058005.t1 | MTR_8g094580 | 40.336 | 238 | 121 | 7 | 1 | 228 | 1 | 227 | 4.13e-48 | 163 |
MS.gene058005.t1 | MTR_1g090723 | 53.595 | 153 | 67 | 2 | 8 | 159 | 10 | 159 | 4.24e-48 | 170 |
MS.gene058005.t1 | MTR_8g063550 | 48.750 | 160 | 79 | 1 | 6 | 165 | 6 | 162 | 5.89e-48 | 167 |
MS.gene058005.t1 | MTR_8g063550 | 48.750 | 160 | 79 | 1 | 6 | 165 | 6 | 162 | 5.89e-48 | 166 |
MS.gene058005.t1 | MTR_3g435150 | 48.521 | 169 | 80 | 3 | 5 | 171 | 15 | 178 | 6.85e-48 | 163 |
MS.gene058005.t1 | MTR_4g035590 | 52.229 | 157 | 64 | 4 | 6 | 159 | 8 | 156 | 8.22e-48 | 164 |
MS.gene058005.t1 | MTR_2g080010 | 48.485 | 165 | 71 | 4 | 6 | 159 | 15 | 176 | 9.54e-48 | 164 |
MS.gene058005.t1 | MTR_3g096920 | 48.851 | 174 | 79 | 4 | 1 | 170 | 1 | 168 | 3.12e-47 | 160 |
MS.gene058005.t1 | MTR_2g093810 | 46.067 | 178 | 87 | 4 | 6 | 178 | 14 | 187 | 3.92e-47 | 161 |
MS.gene058005.t1 | MTR_4g134460 | 51.266 | 158 | 71 | 3 | 2 | 159 | 50 | 201 | 5.11e-47 | 164 |
MS.gene058005.t1 | MTR_4g089135 | 53.901 | 141 | 62 | 2 | 6 | 146 | 15 | 152 | 1.26e-46 | 160 |
MS.gene058005.t1 | MTR_1g090723 | 52.597 | 154 | 68 | 3 | 8 | 160 | 10 | 159 | 1.26e-46 | 166 |
MS.gene058005.t1 | MTR_2g078700 | 57.895 | 133 | 53 | 2 | 4 | 136 | 21 | 150 | 1.68e-46 | 161 |
MS.gene058005.t1 | MTR_7g005280 | 51.299 | 154 | 67 | 3 | 6 | 159 | 15 | 160 | 1.71e-46 | 158 |
MS.gene058005.t1 | MTR_1g090723 | 52.941 | 153 | 67 | 3 | 8 | 159 | 10 | 158 | 1.76e-46 | 166 |
MS.gene058005.t1 | MTR_8g059170 | 52.147 | 163 | 69 | 4 | 6 | 165 | 14 | 170 | 2.51e-46 | 159 |
MS.gene058005.t1 | MTR_4g081870 | 48.795 | 166 | 74 | 4 | 6 | 166 | 9 | 168 | 7.87e-46 | 156 |
MS.gene058005.t1 | MTR_3g096920 | 56.115 | 139 | 54 | 3 | 1 | 138 | 1 | 133 | 9.46e-46 | 158 |
MS.gene058005.t1 | MTR_8g024480 | 44.262 | 183 | 85 | 4 | 6 | 176 | 15 | 192 | 1.29e-45 | 160 |
MS.gene058005.t1 | MTR_6g084430 | 44.253 | 174 | 84 | 4 | 6 | 176 | 5 | 168 | 1.47e-45 | 157 |
MS.gene058005.t1 | MTR_3g088110 | 46.552 | 174 | 84 | 3 | 6 | 176 | 7 | 174 | 1.51e-45 | 156 |
MS.gene058005.t1 | MTR_3g109340 | 41.784 | 213 | 117 | 4 | 6 | 216 | 22 | 229 | 1.63e-45 | 158 |
MS.gene058005.t1 | MTR_1g008740 | 41.315 | 213 | 106 | 7 | 6 | 211 | 13 | 213 | 1.71e-45 | 158 |
MS.gene058005.t1 | MTR_5g041940 | 48.521 | 169 | 76 | 4 | 6 | 169 | 3 | 165 | 2.04e-45 | 155 |
MS.gene058005.t1 | MTR_5g040420 | 42.157 | 204 | 106 | 5 | 5 | 199 | 13 | 213 | 2.26e-45 | 159 |
MS.gene058005.t1 | MTR_1g008740 | 41.315 | 213 | 106 | 7 | 6 | 211 | 27 | 227 | 2.53e-45 | 158 |
MS.gene058005.t1 | MTR_0036s0150 | 51.613 | 155 | 68 | 4 | 8 | 160 | 7 | 156 | 3.46e-45 | 161 |
MS.gene058005.t1 | MTR_7g100990 | 39.556 | 225 | 125 | 5 | 6 | 223 | 11 | 231 | 3.66e-45 | 156 |
MS.gene058005.t1 | MTR_2157s0010 | 45.122 | 164 | 79 | 2 | 6 | 160 | 8 | 169 | 4.27e-45 | 154 |
MS.gene058005.t1 | MTR_8g467490 | 45.506 | 178 | 84 | 5 | 1 | 169 | 10 | 183 | 4.53e-45 | 158 |
MS.gene058005.t1 | MTR_3g109340 | 41.284 | 218 | 112 | 5 | 6 | 216 | 22 | 230 | 4.74e-45 | 157 |
MS.gene058005.t1 | MTR_8g093580 | 46.250 | 160 | 83 | 1 | 6 | 165 | 6 | 162 | 5.24e-45 | 160 |
MS.gene058005.t1 | MTR_6g012670 | 48.466 | 163 | 77 | 3 | 6 | 166 | 20 | 177 | 8.29e-45 | 155 |
MS.gene058005.t1 | MTR_2g079990 | 55.639 | 133 | 54 | 2 | 6 | 138 | 16 | 143 | 1.08e-44 | 157 |
MS.gene058005.t1 | MTR_1g090720 | 52.174 | 161 | 68 | 2 | 6 | 160 | 42 | 199 | 1.44e-44 | 158 |
MS.gene058005.t1 | MTR_3g070030 | 46.199 | 171 | 84 | 4 | 2 | 169 | 15 | 180 | 2.77e-44 | 155 |
MS.gene058005.t1 | MTR_6g011860 | 47.853 | 163 | 72 | 3 | 6 | 159 | 15 | 173 | 3.07e-44 | 155 |
MS.gene058005.t1 | MTR_6g032770 | 51.471 | 136 | 63 | 2 | 6 | 141 | 18 | 150 | 7.64e-44 | 154 |
MS.gene058005.t1 | MTR_7g085260 | 45.833 | 168 | 86 | 3 | 6 | 170 | 17 | 182 | 1.16e-43 | 154 |
MS.gene058005.t1 | MTR_3g116070 | 55.303 | 132 | 55 | 3 | 6 | 136 | 23 | 151 | 3.93e-42 | 149 |
MS.gene058005.t1 | MTR_1g069805 | 40.376 | 213 | 100 | 5 | 3 | 197 | 7 | 210 | 4.37e-42 | 147 |
MS.gene058005.t1 | MTR_2g068920 | 37.712 | 236 | 118 | 8 | 8 | 221 | 23 | 251 | 8.54e-42 | 147 |
MS.gene058005.t1 | MTR_2g068880 | 40.191 | 209 | 102 | 6 | 8 | 194 | 24 | 231 | 3.97e-41 | 145 |
MS.gene058005.t1 | MTR_5g090970 | 38.028 | 213 | 109 | 4 | 2 | 200 | 14 | 217 | 6.64e-41 | 145 |
MS.gene058005.t1 | MTR_4g075980 | 48.684 | 152 | 71 | 3 | 8 | 159 | 17 | 161 | 7.93e-41 | 144 |
MS.gene058005.t1 | MTR_7g097090 | 48.718 | 156 | 69 | 4 | 3 | 156 | 7 | 153 | 1.51e-40 | 143 |
MS.gene058005.t1 | MTR_7g011120 | 50.370 | 135 | 62 | 2 | 2 | 136 | 4 | 133 | 1.99e-40 | 144 |
MS.gene058005.t1 | MTR_5g090970 | 38.028 | 213 | 108 | 4 | 2 | 200 | 14 | 216 | 3.94e-40 | 143 |
MS.gene058005.t1 | MTR_7g011130 | 50.370 | 135 | 62 | 2 | 2 | 136 | 15 | 144 | 6.20e-40 | 143 |
MS.gene058005.t1 | MTR_2g064470 | 47.953 | 171 | 74 | 6 | 1 | 168 | 6 | 164 | 1.12e-39 | 141 |
MS.gene058005.t1 | MTR_3g096140 | 31.973 | 294 | 173 | 8 | 22 | 309 | 2 | 274 | 1.82e-38 | 139 |
MS.gene058005.t1 | MTR_8g023840 | 53.435 | 131 | 58 | 3 | 6 | 135 | 11 | 139 | 2.19e-38 | 140 |
MS.gene058005.t1 | MTR_8g099750 | 43.353 | 173 | 87 | 4 | 6 | 172 | 14 | 181 | 5.35e-37 | 132 |
MS.gene058005.t1 | MTR_3g098810 | 45.342 | 161 | 77 | 4 | 6 | 159 | 14 | 170 | 8.24e-35 | 127 |
MS.gene058005.t1 | MTR_8g023860 | 46.405 | 153 | 74 | 5 | 6 | 157 | 12 | 157 | 8.45e-35 | 131 |
MS.gene058005.t1 | MTR_3g070040 | 44.375 | 160 | 77 | 5 | 10 | 165 | 12 | 163 | 1.09e-34 | 129 |
MS.gene058005.t1 | MTR_8g023900 | 44.375 | 160 | 77 | 5 | 6 | 161 | 12 | 163 | 1.42e-34 | 131 |
MS.gene058005.t1 | MTR_8g023900 | 38.942 | 208 | 117 | 6 | 9 | 213 | 196 | 396 | 2.37e-32 | 125 |
MS.gene058005.t1 | MTR_8g023930 | 38.537 | 205 | 109 | 6 | 5 | 208 | 23 | 211 | 3.38e-34 | 130 |
MS.gene058005.t1 | MTR_3g098810 | 48.872 | 133 | 63 | 2 | 6 | 137 | 14 | 142 | 4.23e-34 | 123 |
MS.gene058005.t1 | MTR_2g086690 | 42.767 | 159 | 78 | 6 | 7 | 156 | 5 | 159 | 2.32e-33 | 123 |
MS.gene058005.t1 | MTR_4g052620 | 41.139 | 158 | 85 | 5 | 5 | 156 | 4 | 159 | 1.93e-32 | 121 |
MS.gene058005.t1 | MTR_7g105170 | 34.322 | 236 | 116 | 10 | 6 | 205 | 4 | 236 | 1.13e-31 | 119 |
MS.gene058005.t1 | MTR_4g094302 | 44.275 | 131 | 62 | 3 | 6 | 136 | 11 | 130 | 1.21e-30 | 113 |
MS.gene058005.t1 | MTR_4g094302 | 44.275 | 131 | 62 | 3 | 6 | 136 | 11 | 130 | 4.56e-30 | 113 |
MS.gene058005.t1 | MTR_8g023880 | 38.830 | 188 | 89 | 6 | 6 | 178 | 7 | 183 | 2.77e-28 | 110 |
MS.gene058005.t1 | MTR_8g094580 | 34.286 | 175 | 97 | 5 | 63 | 228 | 8 | 173 | 5.99e-23 | 95.5 |
MS.gene058005.t1 | MTR_7g070140 | 45.679 | 81 | 43 | 1 | 56 | 136 | 12 | 91 | 4.99e-19 | 82.4 |
MS.gene058005.t1 | MTR_8g093790 | 34.444 | 180 | 93 | 7 | 6 | 185 | 10 | 164 | 2.75e-17 | 79.0 |
MS.gene058005.t1 | MTR_7g083330 | 27.841 | 176 | 112 | 3 | 2 | 172 | 14 | 179 | 1.02e-13 | 68.9 |
MS.gene058005.t1 | MTR_1g087190 | 63.043 | 46 | 16 | 1 | 8 | 52 | 7 | 52 | 4.11e-13 | 63.5 |
MS.gene058005.t1 | MTR_3g096400 | 31.061 | 132 | 80 | 3 | 6 | 136 | 7 | 128 | 5.29e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058005.t1 | AT4G17980 | 54.000 | 300 | 123 | 6 | 1 | 296 | 1 | 289 | 1.58e-99 | 295 |
MS.gene058005.t1 | AT4G17980 | 61.382 | 246 | 83 | 4 | 1 | 242 | 1 | 238 | 8.14e-99 | 292 |
MS.gene058005.t1 | AT5G46590 | 52.013 | 298 | 132 | 5 | 1 | 296 | 1 | 289 | 1.06e-96 | 288 |
MS.gene058005.t1 | AT5G46590 | 49.832 | 297 | 129 | 5 | 1 | 296 | 1 | 278 | 6.41e-91 | 273 |
MS.gene058005.t1 | AT1G32510 | 60.086 | 233 | 73 | 5 | 1 | 227 | 1 | 219 | 2.40e-85 | 258 |
MS.gene058005.t1 | AT3G17730 | 57.542 | 179 | 67 | 2 | 6 | 178 | 6 | 181 | 9.16e-68 | 212 |
MS.gene058005.t1 | AT1G54330 | 65.806 | 155 | 47 | 2 | 6 | 160 | 6 | 154 | 9.25e-66 | 209 |
MS.gene058005.t1 | AT1G65910 | 60.870 | 161 | 60 | 1 | 6 | 166 | 6 | 163 | 3.58e-65 | 216 |
MS.gene058005.t1 | AT3G03200 | 60.625 | 160 | 59 | 2 | 1 | 159 | 1 | 157 | 1.12e-62 | 206 |
MS.gene058005.t1 | AT5G17260 | 59.375 | 160 | 61 | 2 | 1 | 159 | 1 | 157 | 1.45e-62 | 206 |
MS.gene058005.t1 | AT3G10500 | 54.839 | 155 | 67 | 1 | 6 | 160 | 9 | 160 | 9.18e-54 | 184 |
MS.gene058005.t1 | AT5G04410 | 55.484 | 155 | 66 | 1 | 6 | 160 | 9 | 160 | 8.24e-53 | 182 |
MS.gene058005.t1 | AT5G22290 | 51.553 | 161 | 68 | 4 | 1 | 161 | 16 | 166 | 3.74e-52 | 175 |
MS.gene058005.t1 | AT2G18060 | 48.023 | 177 | 80 | 4 | 1 | 176 | 4 | 169 | 1.82e-51 | 174 |
MS.gene058005.t1 | AT2G18060 | 48.023 | 177 | 80 | 4 | 1 | 176 | 4 | 169 | 1.82e-51 | 174 |
MS.gene058005.t1 | AT3G49530 | 53.503 | 157 | 69 | 3 | 6 | 161 | 13 | 166 | 4.00e-51 | 174 |
MS.gene058005.t1 | AT3G10490 | 54.487 | 156 | 67 | 2 | 6 | 160 | 27 | 179 | 4.60e-51 | 169 |
MS.gene058005.t1 | AT4G36160 | 52.903 | 155 | 67 | 3 | 6 | 159 | 10 | 159 | 5.91e-51 | 173 |
MS.gene058005.t1 | AT4G36160 | 52.903 | 155 | 67 | 3 | 6 | 159 | 10 | 159 | 5.91e-51 | 173 |
MS.gene058005.t1 | AT4G36160 | 52.903 | 155 | 67 | 3 | 6 | 159 | 14 | 163 | 6.70e-51 | 173 |
MS.gene058005.t1 | AT3G49530 | 53.503 | 157 | 69 | 3 | 6 | 161 | 13 | 166 | 1.05e-50 | 174 |
MS.gene058005.t1 | AT5G07680 | 50.000 | 168 | 77 | 3 | 6 | 171 | 3 | 165 | 1.16e-50 | 170 |
MS.gene058005.t1 | AT5G07680 | 50.000 | 168 | 77 | 3 | 6 | 171 | 17 | 179 | 1.49e-50 | 171 |
MS.gene058005.t1 | AT1G33060 | 54.545 | 154 | 67 | 1 | 6 | 159 | 24 | 174 | 1.63e-50 | 177 |
MS.gene058005.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 6 | 159 | 9 | 159 | 1.76e-50 | 175 |
MS.gene058005.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 6 | 159 | 9 | 159 | 1.88e-50 | 175 |
MS.gene058005.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 6 | 159 | 9 | 159 | 1.92e-50 | 175 |
MS.gene058005.t1 | AT1G33060 | 54.545 | 154 | 67 | 1 | 6 | 159 | 24 | 174 | 1.95e-50 | 177 |
MS.gene058005.t1 | AT3G44290 | 51.299 | 154 | 64 | 4 | 8 | 161 | 16 | 158 | 2.02e-50 | 167 |
MS.gene058005.t1 | AT1G71930 | 43.979 | 191 | 96 | 4 | 6 | 190 | 9 | 194 | 2.06e-50 | 170 |
MS.gene058005.t1 | AT1G71930 | 43.979 | 191 | 96 | 4 | 6 | 190 | 9 | 194 | 2.06e-50 | 170 |
MS.gene058005.t1 | AT1G12260 | 46.000 | 200 | 93 | 6 | 6 | 200 | 7 | 196 | 4.14e-50 | 170 |
MS.gene058005.t1 | AT3G10480 | 54.194 | 155 | 68 | 1 | 6 | 160 | 27 | 178 | 5.18e-50 | 172 |
MS.gene058005.t1 | AT3G10480 | 53.846 | 156 | 68 | 2 | 6 | 160 | 27 | 179 | 6.46e-50 | 172 |
MS.gene058005.t1 | AT5G66300 | 51.923 | 156 | 70 | 3 | 6 | 160 | 12 | 163 | 7.34e-50 | 167 |
MS.gene058005.t1 | AT5G09330 | 47.879 | 165 | 83 | 1 | 1 | 165 | 1 | 162 | 7.36e-50 | 172 |
MS.gene058005.t1 | AT5G09330 | 47.879 | 165 | 83 | 1 | 1 | 165 | 1 | 162 | 7.36e-50 | 172 |
MS.gene058005.t1 | AT5G09330 | 47.879 | 165 | 83 | 1 | 1 | 165 | 1 | 162 | 7.36e-50 | 172 |
MS.gene058005.t1 | AT5G09330 | 47.879 | 165 | 83 | 1 | 1 | 165 | 1 | 162 | 7.36e-50 | 172 |
MS.gene058005.t1 | AT5G09330 | 47.879 | 165 | 83 | 1 | 1 | 165 | 1 | 162 | 7.36e-50 | 172 |
MS.gene058005.t1 | AT1G12260 | 46.000 | 200 | 93 | 6 | 6 | 200 | 7 | 196 | 7.45e-50 | 171 |
MS.gene058005.t1 | AT3G10490 | 54.487 | 156 | 67 | 2 | 6 | 160 | 27 | 179 | 1.12e-49 | 171 |
MS.gene058005.t1 | AT4G27410 | 49.701 | 167 | 79 | 2 | 6 | 172 | 14 | 175 | 1.72e-49 | 167 |
MS.gene058005.t1 | AT3G44290 | 51.299 | 154 | 64 | 4 | 8 | 161 | 16 | 158 | 2.89e-49 | 167 |
MS.gene058005.t1 | AT5G64060 | 47.500 | 160 | 81 | 1 | 6 | 165 | 6 | 162 | 3.09e-49 | 168 |
MS.gene058005.t1 | AT2G24430 | 37.299 | 311 | 150 | 11 | 2 | 282 | 12 | 307 | 4.86e-49 | 166 |
MS.gene058005.t1 | AT2G24430 | 37.299 | 311 | 150 | 11 | 2 | 282 | 12 | 307 | 4.86e-49 | 166 |
MS.gene058005.t1 | AT5G61430 | 48.810 | 168 | 79 | 3 | 6 | 171 | 16 | 178 | 5.32e-49 | 167 |
MS.gene058005.t1 | AT1G32770 | 38.521 | 257 | 129 | 9 | 6 | 249 | 16 | 256 | 1.72e-48 | 166 |
MS.gene058005.t1 | AT3G61910 | 43.939 | 198 | 90 | 5 | 6 | 187 | 11 | 203 | 2.93e-48 | 165 |
MS.gene058005.t1 | AT1G62700 | 50.968 | 155 | 70 | 3 | 6 | 159 | 7 | 156 | 2.97e-48 | 166 |
MS.gene058005.t1 | AT1G62700 | 50.968 | 155 | 70 | 3 | 6 | 159 | 7 | 156 | 2.97e-48 | 166 |
MS.gene058005.t1 | AT5G24590 | 51.899 | 158 | 74 | 1 | 4 | 161 | 11 | 166 | 5.74e-48 | 167 |
MS.gene058005.t1 | AT1G52890 | 46.629 | 178 | 88 | 3 | 6 | 183 | 14 | 184 | 6.10e-48 | 163 |
MS.gene058005.t1 | AT3G15500 | 48.193 | 166 | 81 | 2 | 6 | 171 | 14 | 174 | 7.47e-48 | 163 |
MS.gene058005.t1 | AT3G15170 | 44.907 | 216 | 102 | 5 | 4 | 214 | 18 | 221 | 9.67e-48 | 162 |
MS.gene058005.t1 | AT5G62380 | 46.111 | 180 | 86 | 4 | 4 | 182 | 5 | 174 | 9.83e-48 | 164 |
MS.gene058005.t1 | AT5G62380 | 46.111 | 180 | 86 | 4 | 4 | 182 | 5 | 174 | 9.83e-48 | 164 |
MS.gene058005.t1 | AT2G02450 | 50.323 | 155 | 71 | 3 | 5 | 159 | 50 | 198 | 1.31e-47 | 164 |
MS.gene058005.t1 | AT2G02450 | 50.323 | 155 | 71 | 3 | 5 | 159 | 50 | 198 | 1.35e-47 | 165 |
MS.gene058005.t1 | AT4G10350 | 50.867 | 173 | 73 | 6 | 6 | 172 | 9 | 175 | 1.60e-47 | 163 |
MS.gene058005.t1 | AT5G39610 | 48.256 | 172 | 76 | 4 | 6 | 172 | 20 | 183 | 2.80e-47 | 160 |
MS.gene058005.t1 | AT1G61110 | 49.123 | 171 | 71 | 5 | 6 | 164 | 16 | 182 | 6.62e-47 | 161 |
MS.gene058005.t1 | AT1G79580 | 53.503 | 157 | 63 | 4 | 6 | 159 | 17 | 166 | 6.73e-47 | 162 |
MS.gene058005.t1 | AT1G79580 | 53.503 | 157 | 63 | 4 | 6 | 159 | 17 | 166 | 6.73e-47 | 162 |
MS.gene058005.t1 | AT1G79580 | 53.503 | 157 | 63 | 4 | 6 | 159 | 17 | 166 | 6.73e-47 | 162 |
MS.gene058005.t1 | AT1G79580 | 53.503 | 157 | 63 | 4 | 6 | 159 | 17 | 166 | 6.73e-47 | 162 |
MS.gene058005.t1 | AT1G79580 | 53.503 | 157 | 63 | 4 | 6 | 159 | 17 | 166 | 6.73e-47 | 162 |
MS.gene058005.t1 | AT3G04070 | 50.000 | 168 | 71 | 5 | 6 | 163 | 10 | 174 | 9.29e-47 | 161 |
MS.gene058005.t1 | AT3G18400 | 48.447 | 161 | 77 | 3 | 6 | 166 | 5 | 159 | 9.48e-47 | 160 |
MS.gene058005.t1 | AT2G27300 | 50.327 | 153 | 65 | 4 | 6 | 158 | 14 | 155 | 1.30e-46 | 160 |
MS.gene058005.t1 | AT4G27410 | 46.703 | 182 | 79 | 3 | 6 | 172 | 14 | 192 | 2.93e-46 | 159 |
MS.gene058005.t1 | AT1G69490 | 50.610 | 164 | 70 | 5 | 6 | 164 | 9 | 166 | 3.84e-46 | 157 |
MS.gene058005.t1 | AT5G08790 | 40.756 | 238 | 122 | 6 | 6 | 237 | 7 | 231 | 4.35e-46 | 157 |
MS.gene058005.t1 | AT1G33280 | 50.318 | 157 | 67 | 5 | 6 | 159 | 8 | 156 | 7.13e-46 | 157 |
MS.gene058005.t1 | AT3G29035 | 55.072 | 138 | 57 | 2 | 6 | 143 | 24 | 156 | 1.01e-45 | 157 |
MS.gene058005.t1 | AT3G04070 | 54.676 | 139 | 57 | 3 | 6 | 141 | 10 | 145 | 1.42e-45 | 158 |
MS.gene058005.t1 | AT2G46770 | 43.523 | 193 | 77 | 6 | 6 | 177 | 16 | 197 | 2.25e-45 | 158 |
MS.gene058005.t1 | AT1G34190 | 55.474 | 137 | 58 | 1 | 3 | 139 | 13 | 146 | 2.91e-45 | 162 |
MS.gene058005.t1 | AT2G33480 | 51.948 | 154 | 64 | 3 | 6 | 159 | 15 | 158 | 5.59e-45 | 154 |
MS.gene058005.t1 | AT1G01720 | 49.091 | 165 | 72 | 4 | 6 | 165 | 7 | 164 | 7.13e-45 | 154 |
MS.gene058005.t1 | AT3G10480 | 45.503 | 189 | 66 | 3 | 6 | 160 | 27 | 212 | 9.11e-45 | 160 |
MS.gene058005.t1 | AT2G33480 | 52.903 | 155 | 63 | 4 | 6 | 159 | 15 | 160 | 9.95e-45 | 154 |
MS.gene058005.t1 | AT2G43000 | 48.366 | 153 | 73 | 3 | 8 | 159 | 20 | 167 | 2.13e-44 | 153 |
MS.gene058005.t1 | AT1G76420 | 50.000 | 162 | 77 | 3 | 6 | 167 | 22 | 179 | 2.17e-44 | 154 |
MS.gene058005.t1 | AT3G04060 | 46.988 | 166 | 82 | 3 | 6 | 169 | 20 | 181 | 3.88e-44 | 154 |
MS.gene058005.t1 | AT5G63790 | 44.503 | 191 | 93 | 4 | 6 | 191 | 50 | 232 | 7.34e-44 | 152 |
MS.gene058005.t1 | AT1G34180 | 50.318 | 157 | 75 | 1 | 3 | 159 | 13 | 166 | 7.67e-44 | 156 |
MS.gene058005.t1 | AT5G63790 | 44.503 | 191 | 93 | 4 | 6 | 191 | 60 | 242 | 8.68e-44 | 152 |
MS.gene058005.t1 | AT5G53950 | 54.412 | 136 | 59 | 2 | 6 | 141 | 17 | 149 | 9.07e-44 | 154 |
MS.gene058005.t1 | AT3G15510 | 45.833 | 168 | 77 | 4 | 10 | 166 | 21 | 185 | 1.36e-43 | 153 |
MS.gene058005.t1 | AT1G34180 | 50.318 | 157 | 75 | 1 | 3 | 159 | 13 | 166 | 3.99e-43 | 156 |
MS.gene058005.t1 | AT1G26870 | 41.700 | 247 | 118 | 9 | 1 | 225 | 12 | 254 | 6.25e-43 | 153 |
MS.gene058005.t1 | AT5G39820 | 52.273 | 132 | 60 | 2 | 5 | 136 | 19 | 147 | 1.43e-42 | 150 |
MS.gene058005.t1 | AT5G18270 | 47.561 | 164 | 72 | 4 | 6 | 163 | 21 | 176 | 2.66e-42 | 149 |
MS.gene058005.t1 | AT5G18270 | 46.951 | 164 | 73 | 4 | 6 | 163 | 21 | 176 | 4.71e-42 | 149 |
MS.gene058005.t1 | AT5G13180 | 54.962 | 131 | 53 | 2 | 6 | 136 | 14 | 138 | 1.63e-41 | 145 |
MS.gene058005.t1 | AT1G52880 | 47.853 | 163 | 74 | 4 | 10 | 163 | 21 | 181 | 1.64e-41 | 147 |
MS.gene058005.t1 | AT1G77450 | 42.211 | 199 | 103 | 5 | 6 | 200 | 10 | 200 | 1.77e-41 | 145 |
MS.gene058005.t1 | AT2G17040 | 44.737 | 152 | 77 | 2 | 8 | 159 | 8 | 152 | 2.65e-41 | 145 |
MS.gene058005.t1 | AT1G32870 | 58.088 | 136 | 52 | 2 | 1 | 136 | 5 | 135 | 3.41e-41 | 150 |
MS.gene058005.t1 | AT1G32870 | 58.088 | 136 | 52 | 2 | 1 | 136 | 5 | 135 | 3.65e-41 | 150 |
MS.gene058005.t1 | AT3G12977 | 46.584 | 161 | 80 | 3 | 1 | 160 | 13 | 168 | 6.34e-41 | 144 |
MS.gene058005.t1 | AT1G32870 | 58.088 | 136 | 52 | 2 | 1 | 136 | 41 | 171 | 7.82e-41 | 150 |
MS.gene058005.t1 | AT1G34180 | 46.746 | 169 | 75 | 2 | 3 | 159 | 13 | 178 | 1.42e-40 | 147 |
MS.gene058005.t1 | AT1G34180 | 46.746 | 169 | 75 | 2 | 3 | 159 | 13 | 178 | 5.99e-40 | 147 |
MS.gene058005.t1 | AT1G56010 | 46.386 | 166 | 76 | 5 | 1 | 160 | 14 | 172 | 8.60e-39 | 140 |
MS.gene058005.t1 | AT3G12910 | 38.182 | 220 | 104 | 6 | 2 | 193 | 17 | 232 | 1.77e-38 | 138 |
MS.gene058005.t1 | AT4G28530 | 43.889 | 180 | 72 | 6 | 3 | 163 | 7 | 176 | 1.17e-36 | 135 |
MS.gene058005.t1 | AT5G04395 | 46.154 | 143 | 66 | 1 | 6 | 137 | 28 | 170 | 1.62e-36 | 130 |
MS.gene058005.t1 | AT5G61430 | 50.450 | 111 | 50 | 2 | 63 | 171 | 8 | 115 | 1.35e-30 | 117 |
MS.gene058005.t1 | AT5G22380 | 36.000 | 200 | 107 | 6 | 9 | 189 | 8 | 205 | 2.03e-30 | 115 |
MS.gene058005.t1 | AT4G01550 | 39.205 | 176 | 100 | 4 | 9 | 183 | 7 | 176 | 9.03e-28 | 112 |
MS.gene058005.t1 | AT3G44350 | 33.645 | 214 | 124 | 8 | 3 | 201 | 2 | 212 | 1.29e-27 | 108 |
MS.gene058005.t1 | AT1G02230 | 35.088 | 171 | 100 | 5 | 7 | 175 | 4 | 165 | 7.18e-27 | 108 |
MS.gene058005.t1 | AT4G10350 | 53.097 | 113 | 46 | 4 | 63 | 172 | 20 | 128 | 7.40e-27 | 107 |
MS.gene058005.t1 | AT5G64530 | 43.609 | 133 | 60 | 4 | 6 | 138 | 3 | 120 | 1.66e-26 | 102 |
MS.gene058005.t1 | AT5G64530 | 43.609 | 133 | 60 | 4 | 6 | 138 | 3 | 120 | 4.45e-26 | 102 |
MS.gene058005.t1 | AT3G12977 | 51.515 | 99 | 44 | 2 | 63 | 160 | 20 | 115 | 5.05e-26 | 103 |
MS.gene058005.t1 | AT4G01520 | 35.625 | 160 | 96 | 3 | 7 | 164 | 5 | 159 | 1.85e-25 | 103 |
MS.gene058005.t1 | AT1G02250 | 38.323 | 167 | 93 | 5 | 7 | 170 | 4 | 163 | 6.39e-25 | 103 |
MS.gene058005.t1 | AT4G28530 | 45.614 | 114 | 42 | 3 | 3 | 99 | 7 | 117 | 2.43e-24 | 100 |
MS.gene058005.t1 | AT1G56010 | 51.456 | 103 | 40 | 3 | 63 | 160 | 8 | 105 | 3.74e-24 | 99.4 |
MS.gene058005.t1 | AT4G01540 | 26.490 | 302 | 186 | 9 | 1 | 297 | 2 | 272 | 5.57e-24 | 101 |
MS.gene058005.t1 | AT4G01540 | 26.490 | 302 | 186 | 9 | 1 | 297 | 2 | 272 | 6.67e-24 | 101 |
MS.gene058005.t1 | AT4G01540 | 26.490 | 302 | 186 | 9 | 1 | 297 | 2 | 272 | 1.17e-23 | 100 |
MS.gene058005.t1 | AT4G01540 | 26.490 | 302 | 186 | 9 | 1 | 297 | 2 | 272 | 1.34e-23 | 100 |
MS.gene058005.t1 | AT3G44350 | 37.324 | 142 | 84 | 4 | 3 | 141 | 2 | 141 | 3.45e-23 | 94.0 |
MS.gene058005.t1 | AT2G33480 | 51.020 | 98 | 43 | 3 | 63 | 159 | 10 | 103 | 4.11e-23 | 95.5 |
MS.gene058005.t1 | AT3G04420 | 39.231 | 130 | 74 | 3 | 7 | 134 | 4 | 130 | 4.55e-23 | 97.1 |
MS.gene058005.t1 | AT3G04420 | 39.231 | 130 | 74 | 3 | 7 | 134 | 4 | 130 | 7.43e-23 | 97.4 |
MS.gene058005.t1 | AT1G01010 | 30.846 | 201 | 119 | 8 | 9 | 197 | 6 | 198 | 7.59e-20 | 89.7 |
MS.gene058005.t1 | AT1G02220 | 34.586 | 133 | 73 | 4 | 7 | 134 | 4 | 127 | 1.92e-18 | 85.5 |
MS.gene058005.t1 | AT3G10490 | 50.617 | 81 | 36 | 2 | 81 | 160 | 2 | 79 | 4.05e-17 | 81.3 |
MS.gene058005.t1 | AT3G10490 | 50.617 | 81 | 36 | 2 | 81 | 160 | 2 | 79 | 4.05e-17 | 81.3 |
MS.gene058005.t1 | AT5G50820 | 31.847 | 157 | 93 | 5 | 6 | 158 | 17 | 163 | 6.11e-16 | 75.5 |
MS.gene058005.t1 | AT3G56530 | 31.373 | 153 | 97 | 4 | 6 | 156 | 52 | 198 | 3.45e-15 | 75.5 |
MS.gene058005.t1 | AT3G55210 | 33.103 | 145 | 80 | 4 | 5 | 136 | 10 | 150 | 3.82e-15 | 74.7 |
MS.gene058005.t1 | AT5G14000 | 32.117 | 137 | 84 | 3 | 3 | 137 | 12 | 141 | 1.11e-14 | 70.9 |
MS.gene058005.t1 | AT2G43000 | 40.659 | 91 | 50 | 2 | 70 | 159 | 2 | 89 | 1.33e-14 | 71.6 |
MS.gene058005.t1 | AT2G18060 | 45.946 | 74 | 35 | 2 | 86 | 159 | 2 | 70 | 2.06e-14 | 72.8 |
MS.gene058005.t1 | AT5G14000 | 27.895 | 190 | 125 | 4 | 3 | 190 | 12 | 191 | 2.10e-14 | 71.2 |
MS.gene058005.t1 | AT5G22290 | 46.667 | 75 | 31 | 3 | 87 | 161 | 2 | 67 | 9.27e-14 | 70.1 |
Find 64 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGGACTATAATGGAAAT+TGG | 0.146738 | 8.3:-21772667 | MS.gene058005:CDS |
TCAGATAATGTAAGTCAAAA+TGG | 0.276555 | 8.3:-21772725 | MS.gene058005:CDS |
CTATTCGTTCTTGATCCATT+TGG | 0.284910 | 8.3:+21773679 | None:intergenic |
AAACCAATCCTTCAAACTTC+TGG | 0.290622 | 8.3:-21773022 | MS.gene058005:CDS |
GTTTGAAGGATTGGTTTCTA+TGG | 0.297007 | 8.3:+21773028 | None:intergenic |
ATTATATATACCTTAAAATA+TGG | 0.308366 | 8.3:+21773469 | None:intergenic |
GAAGAATCAAGAATCATATC+AGG | 0.310654 | 8.3:+21772993 | None:intergenic |
GGGAATTTCATGGACTATAA+TGG | 0.316926 | 8.3:-21772674 | MS.gene058005:CDS |
TATTCGTTCTTGATCCATTT+GGG | 0.330756 | 8.3:+21773680 | None:intergenic |
TTTGCAGTTGCCTGTGATAT+TGG | 0.333796 | 8.3:+21773588 | None:intergenic |
TGAGGTCTCACTTCCATTGA+TGG | 0.347267 | 8.3:+21773142 | None:intergenic |
CAAGCAAGTCACCTGAATAA+TGG | 0.364530 | 8.3:-21773092 | MS.gene058005:CDS |
ATTTGATTATAAACCTCATA+AGG | 0.374916 | 8.3:+21772638 | None:intergenic |
GGCTTTCCAGTAGCCAGCTT+TGG | 0.387525 | 8.3:+21773651 | None:intergenic |
CAGTTAGTTCTATCGCCTAA+TGG | 0.394153 | 8.3:+21773538 | None:intergenic |
GATCCAGAAGTTTGAAGGAT+TGG | 0.396961 | 8.3:+21773019 | None:intergenic |
AAGTTCTCAAGGGAATTTCA+TGG | 0.401113 | 8.3:-21772684 | MS.gene058005:CDS |
AACCATTCTAAATCTCGTTT+CGG | 0.406610 | 8.3:+21773730 | None:intergenic |
CATGGACTATAATGGAAATT+GGG | 0.418240 | 8.3:-21772666 | MS.gene058005:CDS |
CATTAGGCGATAGAACTAAC+TGG | 0.428335 | 8.3:-21773537 | MS.gene058005:CDS |
AAATTGGGATGTTCCTTATG+AGG | 0.431601 | 8.3:-21772651 | MS.gene058005:CDS |
TGAATCACCAAGGCAATCAT+TGG | 0.432172 | 8.3:-21772807 | MS.gene058005:CDS |
GAGCTACCAAAGCTGGCTAC+TGG | 0.434106 | 8.3:-21773657 | MS.gene058005:CDS |
ACATGGTTAAACTCGGCAAT+TGG | 0.434194 | 8.3:+21773053 | None:intergenic |
TATCTTGGAAGGGCTCCATT+AGG | 0.436781 | 8.3:-21773553 | MS.gene058005:CDS |
TTCCCTTGAGAACTTGAGTA+AGG | 0.464374 | 8.3:+21772692 | None:intergenic |
GGGGAGATCCAGAAGTTTGA+AGG | 0.472729 | 8.3:+21773014 | None:intergenic |
TACCGAAACGAGATTTAGAA+TGG | 0.473383 | 8.3:-21773732 | MS.gene058005:CDS |
TATGATTCTTGATTCTTCAA+AGG | 0.498256 | 8.3:-21772988 | MS.gene058005:intron |
ACGAATAGAGCTACCAAAGC+TGG | 0.499433 | 8.3:-21773664 | MS.gene058005:CDS |
CTAGTTCTTCATCAGTTGGA+TGG | 0.505033 | 8.3:+21774069 | None:intergenic |
CCAACTGATGAAGAACTAGT+TGG | 0.507449 | 8.3:-21774065 | MS.gene058005:CDS |
CCAACTAGTTCTTCATCAGT+TGG | 0.511441 | 8.3:+21774065 | None:intergenic |
CGAGATCTAAAGTACCCAAA+TGG | 0.514202 | 8.3:-21773694 | MS.gene058005:CDS |
ATACTATCTTAAAAGAAAAG+TGG | 0.531146 | 8.3:-21774042 | MS.gene058005:CDS |
CCTTAAAATATGGAGAGTCT+TGG | 0.531924 | 8.3:+21773479 | None:intergenic |
TCACCTTACTCAAGTTCTCA+AGG | 0.532937 | 8.3:-21772695 | MS.gene058005:CDS |
TTTGATCCATGGGAGTTGCC+TGG | 0.534126 | 8.3:-21773969 | MS.gene058005:intron |
TGCCTTGGTGATTCACAACT+AGG | 0.543287 | 8.3:+21772815 | None:intergenic |
GTTGCAACAAGTTCCATCAA+TGG | 0.552945 | 8.3:-21773155 | MS.gene058005:CDS |
ATATGTTCCAATGATTGCCT+TGG | 0.556930 | 8.3:+21772800 | None:intergenic |
GCTGGCTACTGGAAAGCCAC+TGG | 0.557528 | 8.3:-21773646 | MS.gene058005:CDS |
TTCAGCATTAAAATTTGAGT+AGG | 0.564818 | 8.3:+21772757 | None:intergenic |
AAGAATCAAGAATCATATCA+GGG | 0.565558 | 8.3:+21772994 | None:intergenic |
GATTGGTTTCTATGGAAACA+TGG | 0.569920 | 8.3:+21773036 | None:intergenic |
AAAAGAATGAGAAGAGCAAG+AGG | 0.571312 | 8.3:-21773178 | MS.gene058005:CDS |
GTTGGATGGAAACGAAAACC+TGG | 0.593509 | 8.3:+21774083 | None:intergenic |
TATGGAAACATGGTTAAACT+CGG | 0.597037 | 8.3:+21773046 | None:intergenic |
CACCTTACTCAAGTTCTCAA+GGG | 0.598211 | 8.3:-21772694 | MS.gene058005:CDS |
AGATTACCAGGCAACTCCCA+TGG | 0.598328 | 8.3:+21773963 | None:intergenic |
GAATAATGGATCACAAAATG+TGG | 0.600990 | 8.3:-21773078 | MS.gene058005:CDS |
TGTACTTCATCCAATATCAC+AGG | 0.604275 | 8.3:-21773598 | MS.gene058005:CDS |
GTCACTTGAGAATCTCATTG+AGG | 0.608676 | 8.3:+21773124 | None:intergenic |
TATCTTAAAAGAAAAGTGGA+AGG | 0.610976 | 8.3:-21774038 | MS.gene058005:CDS |
AGAGTCTTGGCTAAGATCAT+CGG | 0.612585 | 8.3:+21773492 | None:intergenic |
GAAGGAGCATTACTGCCACC+AGG | 0.622199 | 8.3:-21774101 | MS.gene058005:CDS |
ACATTGCAATATAACATGGA+AGG | 0.636691 | 8.3:-21774119 | None:intergenic |
CTCCTAGTTGTGAATCACCA+AGG | 0.645942 | 8.3:-21772817 | MS.gene058005:CDS |
CTTGGTGATTCACAACTAGG+AGG | 0.658943 | 8.3:+21772818 | None:intergenic |
AAAGAATGAGAAGAGCAAGA+GGG | 0.661577 | 8.3:-21773177 | MS.gene058005:CDS |
AGAATCAAGAATCATATCAG+GGG | 0.707288 | 8.3:+21772995 | None:intergenic |
TGATATTGGATGAAGTACAC+TGG | 0.716293 | 8.3:+21773602 | None:intergenic |
CTTGGCTAAGATCATCGGTG+AGG | 0.727040 | 8.3:+21773497 | None:intergenic |
GGATGGAAACGAAAACCTGG+TGG | 0.763193 | 8.3:+21774086 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATATATACCTTAAAATA+TGG | + | chr8.3:21773245-21773264 | None:intergenic | 10.0% |
!! | AATTATAATATGAACAAATG+AGG | - | chr8.3:21773767-21773786 | MS.gene058005:intron | 15.0% |
!! | AATTTGTAAAAATCAATCAC+TGG | + | chr8.3:21772724-21772743 | None:intergenic | 20.0% |
!! | ATACTATCTTAAAAGAAAAG+TGG | - | chr8.3:21772669-21772688 | MS.gene058005:CDS | 20.0% |
!! | ATTTGATTATAAACCTCATA+AGG | + | chr8.3:21774076-21774095 | None:intergenic | 20.0% |
!! | GCATAAATATTTCAAATGTA+AGG | - | chr8.3:21772818-21772837 | MS.gene058005:CDS | 20.0% |
!! | TAAAATATTCTATTTCACAC+TGG | + | chr8.3:21772878-21772897 | None:intergenic | 20.0% |
!!! | ATTTTTACAAATTTGATCCA+TGG | - | chr8.3:21772731-21772750 | MS.gene058005:CDS | 20.0% |
!!! | TTTTTACAAATTTGATCCAT+GGG | - | chr8.3:21772732-21772751 | MS.gene058005:CDS | 20.0% |
! | AAGAATCAAGAATCATATCA+GGG | + | chr8.3:21773720-21773739 | None:intergenic | 25.0% |
! | GAGATTGAATGACTATAATT+TGG | - | chr8.3:21773796-21773815 | MS.gene058005:intron | 25.0% |
! | TATCTTAAAAGAAAAGTGGA+AGG | - | chr8.3:21772673-21772692 | MS.gene058005:CDS | 25.0% |
! | TATGATTCTTGATTCTTCAA+AGG | - | chr8.3:21773723-21773742 | MS.gene058005:CDS | 25.0% |
! | TCAGATAATGTAAGTCAAAA+TGG | - | chr8.3:21773986-21774005 | MS.gene058005:CDS | 25.0% |
! | TTACTGCATTGTTTATGATA+AGG | - | chr8.3:21772906-21772925 | MS.gene058005:intron | 25.0% |
! | TTCAAATGTAAGGTTTGATA+TGG | - | chr8.3:21772828-21772847 | MS.gene058005:CDS | 25.0% |
! | TTCAGCATTAAAATTTGAGT+AGG | + | chr8.3:21773957-21773976 | None:intergenic | 25.0% |
!!! | AAAACACTTGTTTTCTATCT+TGG | - | chr8.3:21773143-21773162 | MS.gene058005:CDS | 25.0% |
!!! | TCTCATTCTTTTTGATAACT+CGG | + | chr8.3:21773525-21773544 | None:intergenic | 25.0% |
AACCATTCTAAATCTCGTTT+CGG | + | chr8.3:21772984-21773003 | None:intergenic | 30.0% | |
ACAAAGCTAACACATTACTA+AGG | + | chr8.3:21773403-21773422 | None:intergenic | 30.0% | |
AGAATCAAGAATCATATCAG+GGG | + | chr8.3:21773719-21773738 | None:intergenic | 30.0% | |
ATGTGAAATTGAAGATTACC+AGG | + | chr8.3:21772763-21772782 | None:intergenic | 30.0% | |
CATTTCACACCTAATGAATT+AGG | + | chr8.3:21772944-21772963 | None:intergenic | 30.0% | |
GAACGTTGAAAGACTAAATT+AGG | - | chr8.3:21773442-21773461 | MS.gene058005:intron | 30.0% | |
GAAGAATCAAGAATCATATC+AGG | + | chr8.3:21773721-21773740 | None:intergenic | 30.0% | |
TATGGAAACATGGTTAAACT+CGG | + | chr8.3:21773668-21773687 | None:intergenic | 30.0% | |
TATTCGTTCTTGATCCATTT+GGG | + | chr8.3:21773034-21773053 | None:intergenic | 30.0% | |
TTTGAGAAGCCTAATTCATT+AGG | - | chr8.3:21772932-21772951 | MS.gene058005:intron | 30.0% | |
! | CATGGACTATAATGGAAATT+GGG | - | chr8.3:21774045-21774064 | MS.gene058005:CDS | 30.0% |
! | CATTTTGTGATCCATTATTC+AGG | + | chr8.3:21773633-21773652 | None:intergenic | 30.0% |
! | TCATGGACTATAATGGAAAT+TGG | - | chr8.3:21774044-21774063 | MS.gene058005:CDS | 30.0% |
!! | AAGGAGTTTGTTTTCAATGT+AGG | + | chr8.3:21773384-21773403 | None:intergenic | 30.0% |
!! | ACTTGTTTTCTATCTTGGAA+GGG | - | chr8.3:21773148-21773167 | MS.gene058005:CDS | 30.0% |
!! | GAATAATGGATCACAAAATG+TGG | - | chr8.3:21773633-21773652 | MS.gene058005:CDS | 30.0% |
AAAAGAATGAGAAGAGCAAG+AGG | - | chr8.3:21773533-21773552 | MS.gene058005:CDS | 35.0% | |
AAACCAATCCTTCAAACTTC+TGG | - | chr8.3:21773689-21773708 | MS.gene058005:CDS | 35.0% | |
AAAGAATGAGAAGAGCAAGA+GGG | - | chr8.3:21773534-21773553 | MS.gene058005:CDS | 35.0% | |
AAATTGGGATGTTCCTTATG+AGG | - | chr8.3:21774060-21774079 | MS.gene058005:CDS | 35.0% | |
AAGTTCTCAAGGGAATTTCA+TGG | - | chr8.3:21774027-21774046 | MS.gene058005:CDS | 35.0% | |
ATATGTTCCAATGATTGCCT+TGG | + | chr8.3:21773914-21773933 | None:intergenic | 35.0% | |
CCTTAAAATATGGAGAGTCT+TGG | + | chr8.3:21773235-21773254 | None:intergenic | 35.0% | |
CTATTCGTTCTTGATCCATT+TGG | + | chr8.3:21773035-21773054 | None:intergenic | 35.0% | |
CTTTAGTATACTCCTACAGT+TGG | + | chr8.3:21773847-21773866 | None:intergenic | 35.0% | |
TACCGAAACGAGATTTAGAA+TGG | - | chr8.3:21772979-21772998 | MS.gene058005:intron | 35.0% | |
TGATATTGGATGAAGTACAC+TGG | + | chr8.3:21773112-21773131 | None:intergenic | 35.0% | |
TGTACTTCATCCAATATCAC+AGG | - | chr8.3:21773113-21773132 | MS.gene058005:CDS | 35.0% | |
! | AATCTTTCTCTCTTTTCCAG+TGG | + | chr8.3:21773084-21773103 | None:intergenic | 35.0% |
! | AGTTTTACTACACCAACTGT+AGG | - | chr8.3:21773832-21773851 | MS.gene058005:intron | 35.0% |
! | CCAAGACTCTCCATATTTTA+AGG | - | chr8.3:21773232-21773251 | MS.gene058005:intron | 35.0% |
! | GGGAATTTCATGGACTATAA+TGG | - | chr8.3:21774037-21774056 | MS.gene058005:CDS | 35.0% |
! | GTAGCGTCTTTGTATTTTCA+CGG | - | chr8.3:21773283-21773302 | MS.gene058005:intron | 35.0% |
!! | CACTTGTTTTCTATCTTGGA+AGG | - | chr8.3:21773147-21773166 | MS.gene058005:CDS | 35.0% |
!! | GATTGGTTTCTATGGAAACA+TGG | + | chr8.3:21773678-21773697 | None:intergenic | 35.0% |
!! | GTTTGAAGGATTGGTTTCTA+TGG | + | chr8.3:21773686-21773705 | None:intergenic | 35.0% |
ACATGGTTAAACTCGGCAAT+TGG | + | chr8.3:21773661-21773680 | None:intergenic | 40.0% | |
AGAGTCTTGGCTAAGATCAT+CGG | + | chr8.3:21773222-21773241 | None:intergenic | 40.0% | |
CAAGCAAGTCACCTGAATAA+TGG | - | chr8.3:21773619-21773638 | MS.gene058005:CDS | 40.0% | |
CACCTTACTCAAGTTCTCAA+GGG | - | chr8.3:21774017-21774036 | MS.gene058005:CDS | 40.0% | |
CATTAGGCGATAGAACTAAC+TGG | - | chr8.3:21773174-21773193 | MS.gene058005:CDS | 40.0% | |
CCAACTGATGAAGAACTAGT+TGG | - | chr8.3:21772646-21772665 | MS.gene058005:CDS | 40.0% | |
GATCCAGAAGTTTGAAGGAT+TGG | + | chr8.3:21773695-21773714 | None:intergenic | 40.0% | |
GCATATATGTGGTTGCTGTA+GGG | - | chr8.3:21773484-21773503 | MS.gene058005:CDS | 40.0% | |
GTCACTTGAGAATCTCATTG+AGG | + | chr8.3:21773590-21773609 | None:intergenic | 40.0% | |
GTTGCAACAAGTTCCATCAA+TGG | - | chr8.3:21773556-21773575 | MS.gene058005:CDS | 40.0% | |
TCAATTGCAAGGCTATGATC+TGG | - | chr8.3:21773327-21773346 | MS.gene058005:intron | 40.0% | |
TCACCTTACTCAAGTTCTCA+AGG | - | chr8.3:21774016-21774035 | MS.gene058005:CDS | 40.0% | |
TGAATCACCAAGGCAATCAT+TGG | - | chr8.3:21773904-21773923 | MS.gene058005:intron | 40.0% | |
TGCATATATGTGGTTGCTGT+AGG | - | chr8.3:21773483-21773502 | MS.gene058005:CDS | 40.0% | |
TTCCCTTGAGAACTTGAGTA+AGG | + | chr8.3:21774022-21774041 | None:intergenic | 40.0% | |
TTGAACGCATGTCAATTGCA+AGG | - | chr8.3:21773316-21773335 | MS.gene058005:intron | 40.0% | |
TTTGCAGTTGCCTGTGATAT+TGG | + | chr8.3:21773126-21773145 | None:intergenic | 40.0% | |
! | CCAACTAGTTCTTCATCAGT+TGG | + | chr8.3:21772649-21772668 | None:intergenic | 40.0% |
! | CGAGATCTAAAGTACCCAAA+TGG | - | chr8.3:21773017-21773036 | MS.gene058005:CDS | 40.0% |
! | CTAGTTCTTCATCAGTTGGA+TGG | + | chr8.3:21772645-21772664 | None:intergenic | 40.0% |
! | CTTTTACTTTAACGTGCGGT+GGG | - | chr8.3:21773352-21773371 | MS.gene058005:intron | 40.0% |
! | GGAGCTTTTACTTTAACGTG+CGG | - | chr8.3:21773348-21773367 | MS.gene058005:intron | 40.0% |
!! | CAGTTAGTTCTATCGCCTAA+TGG | + | chr8.3:21773176-21773195 | None:intergenic | 40.0% |
ACGAATAGAGCTACCAAAGC+TGG | - | chr8.3:21773047-21773066 | MS.gene058005:CDS | 45.0% | |
ATTAGGTGTGTGTTTGCACG+CGG | - | chr8.3:21773459-21773478 | MS.gene058005:intron | 45.0% | |
CTCCTAGTTGTGAATCACCA+AGG | - | chr8.3:21773894-21773913 | MS.gene058005:intron | 45.0% | |
GTTGGATGGAAACGAAAACC+TGG | + | chr8.3:21772631-21772650 | None:intergenic | 45.0% | |
TATATGTGGTTGCTGTAGGG+TGG | - | chr8.3:21773487-21773506 | MS.gene058005:CDS | 45.0% | |
TATCTTGGAAGGGCTCCATT+AGG | - | chr8.3:21773158-21773177 | MS.gene058005:CDS | 45.0% | |
TGAGGTCTCACTTCCATTGA+TGG | + | chr8.3:21773572-21773591 | None:intergenic | 45.0% | |
! | CTTGGTGATTCACAACTAGG+AGG | + | chr8.3:21773896-21773915 | None:intergenic | 45.0% |
! | GCTTTTACTTTAACGTGCGG+TGG | - | chr8.3:21773351-21773370 | MS.gene058005:intron | 45.0% |
! | TGCCTTGGTGATTCACAACT+AGG | + | chr8.3:21773899-21773918 | None:intergenic | 45.0% |
AGATTACCAGGCAACTCCCA+TGG | + | chr8.3:21772751-21772770 | None:intergenic | 50.0% | |
CTTGGCTAAGATCATCGGTG+AGG | + | chr8.3:21773217-21773236 | None:intergenic | 50.0% | |
GGATGGAAACGAAAACCTGG+TGG | + | chr8.3:21772628-21772647 | None:intergenic | 50.0% | |
GGGGAGATCCAGAAGTTTGA+AGG | + | chr8.3:21773700-21773719 | None:intergenic | 50.0% | |
TTAGGTGTGTGTTTGCACGC+GGG | - | chr8.3:21773460-21773479 | MS.gene058005:intron | 50.0% | |
TTTGATCCATGGGAGTTGCC+TGG | - | chr8.3:21772742-21772761 | MS.gene058005:CDS | 50.0% | |
GAGCTACCAAAGCTGGCTAC+TGG | - | chr8.3:21773054-21773073 | MS.gene058005:CDS | 55.0% | |
GGCTTTCCAGTAGCCAGCTT+TGG | + | chr8.3:21773063-21773082 | None:intergenic | 55.0% | |
TGCACGCGGGTGCATATATG+TGG | - | chr8.3:21773473-21773492 | MS.gene058005:intron | 55.0% | |
!! | GAAGGAGCATTACTGCCACC+AGG | - | chr8.3:21772610-21772629 | MS.gene058005:CDS | 55.0% |
GCTGGCTACTGGAAAGCCAC+TGG | - | chr8.3:21773065-21773084 | MS.gene058005:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 21772607 | 21774126 | 21772607 | ID=MS.gene058005 |
chr8.3 | mRNA | 21772607 | 21774126 | 21772607 | ID=MS.gene058005.t1;Parent=MS.gene058005 |
chr8.3 | exon | 21773970 | 21774126 | 21773970 | ID=MS.gene058005.t1.exon1;Parent=MS.gene058005.t1 |
chr8.3 | CDS | 21773970 | 21774126 | 21773970 | ID=cds.MS.gene058005.t1;Parent=MS.gene058005.t1 |
chr8.3 | exon | 21773480 | 21773766 | 21773480 | ID=MS.gene058005.t1.exon2;Parent=MS.gene058005.t1 |
chr8.3 | CDS | 21773480 | 21773766 | 21773480 | ID=cds.MS.gene058005.t1;Parent=MS.gene058005.t1 |
chr8.3 | exon | 21772989 | 21773228 | 21772989 | ID=MS.gene058005.t1.exon3;Parent=MS.gene058005.t1 |
chr8.3 | CDS | 21772989 | 21773228 | 21772989 | ID=cds.MS.gene058005.t1;Parent=MS.gene058005.t1 |
chr8.3 | exon | 21772607 | 21772879 | 21772607 | ID=MS.gene058005.t1.exon4;Parent=MS.gene058005.t1 |
chr8.3 | CDS | 21772607 | 21772879 | 21772607 | ID=cds.MS.gene058005.t1;Parent=MS.gene058005.t1 |
Gene Sequence |
Protein sequence |