Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60394.t1 | XP_003608633.1 | 95.7 | 305 | 12 | 1 | 1 | 305 | 1 | 304 | 4.60E-168 | 600.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60394.t1 | O49697 | 62.0 | 245 | 81 | 4 | 3 | 243 | 2 | 238 | 2.0e-79 | 297.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60394.t1 | G7JGH7 | 95.7 | 305 | 12 | 1 | 1 | 305 | 1 | 304 | 3.3e-168 | 600.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene60394.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051521 | MS.gene60394 | 0.80438 | 2.22E-49 | -1.69E-46 |
MS.gene052011 | MS.gene60394 | -0.80735 | 5.28E-50 | -1.69E-46 |
MS.gene053169 | MS.gene60394 | 0.819509 | 1.12E-52 | -1.69E-46 |
MS.gene054556 | MS.gene60394 | 0.825001 | 5.95E-54 | -1.69E-46 |
MS.gene058005 | MS.gene60394 | 0.833777 | 4.39E-56 | -1.69E-46 |
MS.gene059946 | MS.gene60394 | 0.817474 | 3.24E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60394.t1 | MTR_4g098630 | 95.738 | 305 | 12 | 1 | 1 | 305 | 1 | 304 | 0.0 | 607 |
MS.gene60394.t1 | MTR_5g014300 | 61.562 | 333 | 91 | 9 | 3 | 308 | 2 | 324 | 2.04e-130 | 375 |
MS.gene60394.t1 | MTR_6g477900 | 64.516 | 155 | 52 | 1 | 7 | 161 | 6 | 157 | 1.19e-67 | 212 |
MS.gene60394.t1 | MTR_5g076850 | 61.688 | 154 | 56 | 1 | 7 | 160 | 6 | 156 | 2.61e-62 | 209 |
MS.gene60394.t1 | MTR_2g064090 | 58.750 | 160 | 62 | 2 | 3 | 161 | 2 | 158 | 4.03e-62 | 201 |
MS.gene60394.t1 | MTR_3g064580 | 53.191 | 188 | 73 | 4 | 7 | 192 | 6 | 180 | 9.75e-62 | 208 |
MS.gene60394.t1 | MTR_5g021710 | 45.000 | 200 | 98 | 5 | 7 | 205 | 8 | 196 | 1.61e-51 | 174 |
MS.gene60394.t1 | MTR_1g097300 | 55.921 | 152 | 64 | 1 | 9 | 160 | 21 | 169 | 3.98e-51 | 178 |
MS.gene60394.t1 | MTR_1g096430 | 49.701 | 167 | 78 | 3 | 1 | 166 | 1 | 162 | 3.86e-50 | 170 |
MS.gene60394.t1 | MTR_3g093040 | 51.534 | 163 | 74 | 3 | 7 | 168 | 108 | 266 | 4.27e-49 | 166 |
MS.gene60394.t1 | MTR_5g069030 | 55.346 | 159 | 66 | 3 | 7 | 164 | 25 | 179 | 6.21e-49 | 173 |
MS.gene60394.t1 | MTR_8g076110 | 50.000 | 156 | 72 | 3 | 7 | 161 | 6 | 156 | 7.47e-49 | 166 |
MS.gene60394.t1 | MTR_3g096140 | 48.447 | 161 | 80 | 1 | 6 | 166 | 6 | 163 | 1.05e-48 | 164 |
MS.gene60394.t1 | MTR_8g094580 | 39.916 | 238 | 123 | 6 | 1 | 229 | 1 | 227 | 1.09e-48 | 164 |
MS.gene60394.t1 | MTR_3g093050 | 53.374 | 163 | 71 | 3 | 7 | 168 | 22 | 180 | 1.51e-48 | 171 |
MS.gene60394.t1 | MTR_4g101680 | 51.613 | 155 | 69 | 3 | 7 | 160 | 7 | 156 | 2.31e-48 | 166 |
MS.gene60394.t1 | MTR_4g036030 | 49.123 | 171 | 76 | 4 | 7 | 176 | 7 | 167 | 2.32e-48 | 165 |
MS.gene60394.t1 | MTR_3g093050 | 53.374 | 163 | 71 | 3 | 7 | 168 | 22 | 180 | 3.34e-48 | 171 |
MS.gene60394.t1 | MTR_2g062730 | 49.398 | 166 | 75 | 4 | 3 | 165 | 6 | 165 | 5.56e-48 | 164 |
MS.gene60394.t1 | MTR_2g086880 | 46.193 | 197 | 87 | 6 | 9 | 200 | 20 | 202 | 6.83e-48 | 168 |
MS.gene60394.t1 | MTR_3g096140 | 48.447 | 161 | 80 | 1 | 6 | 166 | 6 | 163 | 8.99e-48 | 164 |
MS.gene60394.t1 | MTR_5g012080 | 43.750 | 192 | 99 | 4 | 7 | 197 | 7 | 190 | 1.28e-47 | 164 |
MS.gene60394.t1 | MTR_3g096920 | 48.276 | 174 | 81 | 3 | 1 | 171 | 1 | 168 | 1.38e-47 | 162 |
MS.gene60394.t1 | MTR_7g085220 | 45.304 | 181 | 83 | 4 | 7 | 177 | 8 | 182 | 1.51e-47 | 163 |
MS.gene60394.t1 | MTR_2g086880 | 46.193 | 197 | 87 | 6 | 9 | 200 | 20 | 202 | 1.69e-47 | 168 |
MS.gene60394.t1 | MTR_2g079990 | 45.810 | 179 | 92 | 2 | 5 | 183 | 14 | 187 | 2.17e-47 | 163 |
MS.gene60394.t1 | MTR_1g090723 | 52.500 | 160 | 72 | 3 | 2 | 160 | 3 | 159 | 2.33e-47 | 169 |
MS.gene60394.t1 | MTR_8g063550 | 48.125 | 160 | 80 | 1 | 7 | 166 | 6 | 162 | 2.45e-47 | 162 |
MS.gene60394.t1 | MTR_3g435150 | 47.647 | 170 | 82 | 3 | 5 | 172 | 14 | 178 | 3.79e-47 | 161 |
MS.gene60394.t1 | MTR_4g108760 | 47.619 | 168 | 81 | 3 | 7 | 172 | 17 | 179 | 3.89e-47 | 162 |
MS.gene60394.t1 | MTR_4g134460 | 52.632 | 152 | 66 | 3 | 9 | 160 | 56 | 201 | 6.70e-47 | 164 |
MS.gene60394.t1 | MTR_2g080010 | 47.879 | 165 | 72 | 4 | 7 | 160 | 15 | 176 | 9.57e-47 | 161 |
MS.gene60394.t1 | MTR_2g093810 | 46.067 | 178 | 87 | 4 | 7 | 179 | 14 | 187 | 1.19e-46 | 160 |
MS.gene60394.t1 | MTR_8g063550 | 48.125 | 160 | 80 | 1 | 7 | 166 | 6 | 162 | 1.27e-46 | 163 |
MS.gene60394.t1 | MTR_4g035590 | 51.592 | 157 | 65 | 4 | 7 | 160 | 8 | 156 | 1.37e-46 | 161 |
MS.gene60394.t1 | MTR_8g063550 | 48.125 | 160 | 80 | 1 | 7 | 166 | 6 | 162 | 1.95e-46 | 162 |
MS.gene60394.t1 | MTR_7g005280 | 49.367 | 158 | 72 | 3 | 3 | 160 | 11 | 160 | 4.43e-46 | 157 |
MS.gene60394.t1 | MTR_3g096920 | 55.396 | 139 | 56 | 2 | 1 | 139 | 1 | 133 | 4.67e-46 | 159 |
MS.gene60394.t1 | MTR_1g090723 | 51.553 | 161 | 73 | 4 | 2 | 161 | 3 | 159 | 8.72e-46 | 164 |
MS.gene60394.t1 | MTR_4g089135 | 53.191 | 141 | 63 | 2 | 7 | 147 | 15 | 152 | 9.01e-46 | 159 |
MS.gene60394.t1 | MTR_1g090723 | 51.875 | 160 | 72 | 4 | 2 | 160 | 3 | 158 | 9.13e-46 | 164 |
MS.gene60394.t1 | MTR_3g088110 | 45.556 | 180 | 89 | 3 | 1 | 177 | 1 | 174 | 1.31e-45 | 157 |
MS.gene60394.t1 | MTR_8g024480 | 42.051 | 195 | 96 | 4 | 1 | 183 | 9 | 198 | 4.79e-45 | 159 |
MS.gene60394.t1 | MTR_4g081870 | 48.795 | 166 | 74 | 4 | 7 | 167 | 9 | 168 | 5.22e-45 | 154 |
MS.gene60394.t1 | MTR_8g059170 | 50.909 | 165 | 72 | 4 | 5 | 166 | 12 | 170 | 5.88e-45 | 156 |
MS.gene60394.t1 | MTR_6g084430 | 43.678 | 174 | 85 | 4 | 7 | 177 | 5 | 168 | 8.88e-45 | 155 |
MS.gene60394.t1 | MTR_5g041940 | 47.953 | 171 | 78 | 4 | 5 | 170 | 1 | 165 | 1.41e-44 | 153 |
MS.gene60394.t1 | MTR_7g100990 | 38.767 | 227 | 128 | 5 | 5 | 224 | 9 | 231 | 1.86e-44 | 155 |
MS.gene60394.t1 | MTR_5g040420 | 42.157 | 204 | 106 | 5 | 6 | 200 | 13 | 213 | 1.94e-44 | 156 |
MS.gene60394.t1 | MTR_0036s0150 | 50.625 | 160 | 72 | 5 | 4 | 161 | 2 | 156 | 2.22e-44 | 159 |
MS.gene60394.t1 | MTR_2g078700 | 55.725 | 131 | 55 | 2 | 7 | 137 | 23 | 150 | 2.50e-44 | 155 |
MS.gene60394.t1 | MTR_2157s0010 | 45.122 | 164 | 79 | 2 | 7 | 161 | 8 | 169 | 4.19e-44 | 152 |
MS.gene60394.t1 | MTR_6g012670 | 47.853 | 163 | 78 | 3 | 7 | 167 | 20 | 177 | 5.91e-44 | 153 |
MS.gene60394.t1 | MTR_3g109340 | 40.845 | 213 | 119 | 4 | 7 | 217 | 22 | 229 | 8.04e-44 | 154 |
MS.gene60394.t1 | MTR_8g467490 | 45.402 | 174 | 83 | 4 | 6 | 170 | 13 | 183 | 8.61e-44 | 155 |
MS.gene60394.t1 | MTR_1g008740 | 40.376 | 213 | 108 | 7 | 7 | 212 | 13 | 213 | 9.10e-44 | 153 |
MS.gene60394.t1 | MTR_1g008740 | 40.376 | 213 | 108 | 7 | 7 | 212 | 27 | 227 | 1.26e-43 | 153 |
MS.gene60394.t1 | MTR_2g079990 | 54.815 | 135 | 56 | 2 | 5 | 139 | 14 | 143 | 1.50e-43 | 154 |
MS.gene60394.t1 | MTR_8g093580 | 45.625 | 160 | 84 | 1 | 7 | 166 | 6 | 162 | 1.55e-43 | 156 |
MS.gene60394.t1 | MTR_3g070030 | 46.061 | 165 | 81 | 4 | 5 | 166 | 17 | 176 | 1.67e-43 | 153 |
MS.gene60394.t1 | MTR_1g090720 | 51.553 | 161 | 69 | 2 | 7 | 161 | 42 | 199 | 2.14e-43 | 155 |
MS.gene60394.t1 | MTR_3g109340 | 40.367 | 218 | 114 | 5 | 7 | 217 | 22 | 230 | 2.21e-43 | 152 |
MS.gene60394.t1 | MTR_6g011860 | 47.853 | 163 | 72 | 3 | 7 | 160 | 15 | 173 | 3.90e-43 | 153 |
MS.gene60394.t1 | MTR_6g032770 | 50.725 | 138 | 65 | 2 | 5 | 142 | 16 | 150 | 7.19e-43 | 152 |
MS.gene60394.t1 | MTR_7g085260 | 44.828 | 174 | 85 | 4 | 4 | 171 | 14 | 182 | 3.57e-42 | 150 |
MS.gene60394.t1 | MTR_3g116070 | 54.545 | 132 | 56 | 3 | 7 | 137 | 23 | 151 | 1.36e-41 | 148 |
MS.gene60394.t1 | MTR_4g075980 | 48.684 | 152 | 71 | 3 | 9 | 160 | 17 | 161 | 1.25e-40 | 144 |
MS.gene60394.t1 | MTR_2g068920 | 36.864 | 236 | 120 | 8 | 9 | 222 | 23 | 251 | 3.98e-40 | 142 |
MS.gene60394.t1 | MTR_1g069805 | 39.048 | 210 | 101 | 5 | 7 | 198 | 10 | 210 | 2.11e-39 | 140 |
MS.gene60394.t1 | MTR_2g068880 | 39.234 | 209 | 104 | 6 | 9 | 195 | 24 | 231 | 2.18e-39 | 141 |
MS.gene60394.t1 | MTR_7g011120 | 51.562 | 128 | 57 | 2 | 10 | 137 | 11 | 133 | 2.88e-39 | 140 |
MS.gene60394.t1 | MTR_5g090970 | 37.619 | 210 | 108 | 4 | 6 | 201 | 17 | 217 | 3.68e-39 | 140 |
MS.gene60394.t1 | MTR_7g011130 | 51.562 | 128 | 57 | 2 | 10 | 137 | 22 | 144 | 7.73e-39 | 140 |
MS.gene60394.t1 | MTR_5g090970 | 37.619 | 210 | 107 | 4 | 6 | 201 | 17 | 216 | 2.24e-38 | 138 |
MS.gene60394.t1 | MTR_2g064470 | 47.590 | 166 | 72 | 6 | 7 | 169 | 11 | 164 | 3.46e-38 | 137 |
MS.gene60394.t1 | MTR_3g096140 | 45.139 | 144 | 76 | 1 | 23 | 166 | 2 | 142 | 7.63e-38 | 137 |
MS.gene60394.t1 | MTR_7g097090 | 47.712 | 153 | 69 | 4 | 7 | 157 | 10 | 153 | 9.90e-38 | 136 |
MS.gene60394.t1 | MTR_8g023840 | 52.672 | 131 | 59 | 3 | 7 | 136 | 11 | 139 | 4.78e-37 | 137 |
MS.gene60394.t1 | MTR_8g099750 | 43.333 | 180 | 85 | 5 | 3 | 173 | 10 | 181 | 5.28e-36 | 130 |
MS.gene60394.t1 | MTR_8g023900 | 45.000 | 160 | 76 | 5 | 7 | 162 | 12 | 163 | 2.68e-35 | 133 |
MS.gene60394.t1 | MTR_8g023900 | 38.498 | 213 | 121 | 6 | 5 | 214 | 191 | 396 | 6.48e-32 | 124 |
MS.gene60394.t1 | MTR_3g070040 | 43.750 | 160 | 78 | 5 | 11 | 166 | 12 | 163 | 6.55e-34 | 127 |
MS.gene60394.t1 | MTR_8g023860 | 45.752 | 153 | 75 | 5 | 7 | 158 | 12 | 157 | 8.65e-34 | 128 |
MS.gene60394.t1 | MTR_8g023930 | 38.049 | 205 | 110 | 6 | 6 | 209 | 23 | 211 | 1.80e-33 | 128 |
MS.gene60394.t1 | MTR_3g098810 | 44.242 | 165 | 81 | 4 | 3 | 160 | 10 | 170 | 2.92e-33 | 123 |
MS.gene60394.t1 | MTR_2g086690 | 42.767 | 159 | 78 | 6 | 8 | 157 | 5 | 159 | 1.21e-32 | 121 |
MS.gene60394.t1 | MTR_4g052620 | 41.772 | 158 | 84 | 5 | 6 | 157 | 4 | 159 | 1.29e-32 | 122 |
MS.gene60394.t1 | MTR_3g098810 | 47.101 | 138 | 68 | 2 | 3 | 139 | 10 | 143 | 2.53e-32 | 118 |
MS.gene60394.t1 | MTR_4g094302 | 46.565 | 131 | 59 | 3 | 7 | 137 | 11 | 130 | 1.00e-31 | 116 |
MS.gene60394.t1 | MTR_7g105170 | 34.746 | 236 | 115 | 10 | 7 | 206 | 4 | 236 | 1.02e-31 | 119 |
MS.gene60394.t1 | MTR_4g094302 | 45.802 | 131 | 60 | 3 | 7 | 137 | 11 | 130 | 4.06e-31 | 116 |
MS.gene60394.t1 | MTR_8g023880 | 37.629 | 194 | 95 | 6 | 1 | 179 | 1 | 183 | 2.10e-28 | 110 |
MS.gene60394.t1 | MTR_8g094580 | 34.104 | 173 | 96 | 5 | 64 | 227 | 8 | 171 | 4.28e-22 | 93.2 |
MS.gene60394.t1 | MTR_7g070140 | 46.914 | 81 | 42 | 1 | 57 | 137 | 12 | 91 | 1.52e-19 | 83.6 |
MS.gene60394.t1 | MTR_8g093790 | 33.514 | 185 | 98 | 7 | 2 | 186 | 5 | 164 | 1.35e-17 | 79.7 |
MS.gene60394.t1 | MTR_1g087190 | 58.824 | 51 | 20 | 1 | 4 | 53 | 2 | 52 | 2.89e-13 | 63.9 |
MS.gene60394.t1 | MTR_3g096400 | 29.885 | 174 | 99 | 6 | 1 | 161 | 1 | 164 | 5.20e-13 | 67.4 |
MS.gene60394.t1 | MTR_7g083330 | 27.684 | 177 | 113 | 3 | 2 | 173 | 13 | 179 | 8.48e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60394.t1 | AT4G17980 | 54.849 | 299 | 120 | 7 | 3 | 297 | 2 | 289 | 1.51e-100 | 298 |
MS.gene60394.t1 | AT4G17980 | 61.633 | 245 | 82 | 4 | 3 | 243 | 2 | 238 | 1.33e-98 | 291 |
MS.gene60394.t1 | AT5G46590 | 52.189 | 297 | 131 | 5 | 3 | 297 | 2 | 289 | 3.66e-96 | 286 |
MS.gene60394.t1 | AT5G46590 | 50.000 | 296 | 128 | 5 | 3 | 297 | 2 | 278 | 1.61e-90 | 271 |
MS.gene60394.t1 | AT1G32510 | 60.262 | 229 | 71 | 5 | 6 | 228 | 5 | 219 | 1.61e-82 | 251 |
MS.gene60394.t1 | AT3G17730 | 56.983 | 179 | 68 | 2 | 7 | 179 | 6 | 181 | 3.83e-66 | 208 |
MS.gene60394.t1 | AT1G54330 | 65.806 | 155 | 47 | 2 | 7 | 161 | 6 | 154 | 3.26e-65 | 207 |
MS.gene60394.t1 | AT1G65910 | 60.870 | 161 | 60 | 1 | 7 | 167 | 6 | 163 | 3.20e-64 | 214 |
MS.gene60394.t1 | AT3G03200 | 61.935 | 155 | 55 | 2 | 7 | 160 | 6 | 157 | 5.27e-62 | 204 |
MS.gene60394.t1 | AT5G17260 | 60.645 | 155 | 57 | 2 | 7 | 160 | 6 | 157 | 8.02e-62 | 204 |
MS.gene60394.t1 | AT3G10500 | 54.194 | 155 | 68 | 1 | 7 | 161 | 9 | 160 | 2.08e-52 | 181 |
MS.gene60394.t1 | AT5G04410 | 54.839 | 155 | 67 | 1 | 7 | 161 | 9 | 160 | 2.19e-51 | 178 |
MS.gene60394.t1 | AT1G33060 | 53.988 | 163 | 68 | 2 | 2 | 160 | 15 | 174 | 3.75e-50 | 176 |
MS.gene60394.t1 | AT1G33060 | 53.988 | 163 | 68 | 2 | 2 | 160 | 15 | 174 | 4.06e-50 | 176 |
MS.gene60394.t1 | AT1G71930 | 40.741 | 216 | 117 | 4 | 7 | 216 | 9 | 219 | 6.42e-50 | 169 |
MS.gene60394.t1 | AT1G71930 | 40.741 | 216 | 117 | 4 | 7 | 216 | 9 | 219 | 6.42e-50 | 169 |
MS.gene60394.t1 | AT1G12260 | 46.500 | 200 | 92 | 6 | 7 | 201 | 7 | 196 | 6.60e-50 | 169 |
MS.gene60394.t1 | AT3G10490 | 53.459 | 159 | 70 | 2 | 4 | 161 | 24 | 179 | 7.02e-50 | 166 |
MS.gene60394.t1 | AT4G35580 | 51.099 | 182 | 84 | 3 | 7 | 187 | 9 | 186 | 7.50e-50 | 173 |
MS.gene60394.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 7 | 160 | 9 | 159 | 8.70e-50 | 174 |
MS.gene60394.t1 | AT5G22290 | 51.235 | 162 | 68 | 5 | 1 | 162 | 16 | 166 | 9.41e-50 | 169 |
MS.gene60394.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 7 | 160 | 9 | 159 | 9.61e-50 | 173 |
MS.gene60394.t1 | AT5G07680 | 49.405 | 168 | 78 | 3 | 7 | 172 | 3 | 165 | 1.22e-49 | 168 |
MS.gene60394.t1 | AT4G36160 | 52.258 | 155 | 68 | 3 | 7 | 160 | 10 | 159 | 1.39e-49 | 169 |
MS.gene60394.t1 | AT4G36160 | 52.258 | 155 | 68 | 3 | 7 | 160 | 10 | 159 | 1.39e-49 | 169 |
MS.gene60394.t1 | AT5G07680 | 49.405 | 168 | 78 | 3 | 7 | 172 | 17 | 179 | 1.44e-49 | 168 |
MS.gene60394.t1 | AT4G36160 | 52.258 | 155 | 68 | 3 | 7 | 160 | 14 | 163 | 1.51e-49 | 169 |
MS.gene60394.t1 | AT1G12260 | 46.500 | 200 | 92 | 6 | 7 | 201 | 7 | 196 | 1.65e-49 | 170 |
MS.gene60394.t1 | AT3G44290 | 51.299 | 154 | 64 | 4 | 9 | 162 | 16 | 158 | 1.99e-49 | 164 |
MS.gene60394.t1 | AT3G49530 | 52.229 | 157 | 71 | 3 | 7 | 162 | 13 | 166 | 3.24e-49 | 169 |
MS.gene60394.t1 | AT2G18060 | 47.674 | 172 | 78 | 4 | 7 | 177 | 9 | 169 | 5.61e-49 | 167 |
MS.gene60394.t1 | AT2G18060 | 47.674 | 172 | 78 | 4 | 7 | 177 | 9 | 169 | 5.61e-49 | 167 |
MS.gene60394.t1 | AT3G10480 | 53.165 | 158 | 71 | 1 | 4 | 161 | 24 | 178 | 8.39e-49 | 169 |
MS.gene60394.t1 | AT3G49530 | 52.229 | 157 | 71 | 3 | 7 | 162 | 13 | 166 | 9.78e-49 | 169 |
MS.gene60394.t1 | AT3G10480 | 52.830 | 159 | 71 | 2 | 4 | 161 | 24 | 179 | 1.27e-48 | 169 |
MS.gene60394.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 1.37e-48 | 169 |
MS.gene60394.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 1.37e-48 | 169 |
MS.gene60394.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 1.37e-48 | 169 |
MS.gene60394.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 1.37e-48 | 169 |
MS.gene60394.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 1.37e-48 | 169 |
MS.gene60394.t1 | AT3G10490 | 53.459 | 159 | 70 | 2 | 4 | 161 | 24 | 179 | 1.79e-48 | 168 |
MS.gene60394.t1 | AT5G66300 | 51.613 | 155 | 70 | 3 | 7 | 160 | 12 | 162 | 1.92e-48 | 164 |
MS.gene60394.t1 | AT4G27410 | 49.112 | 169 | 81 | 2 | 5 | 173 | 12 | 175 | 3.19e-48 | 164 |
MS.gene60394.t1 | AT2G02450 | 50.968 | 155 | 70 | 3 | 6 | 160 | 50 | 198 | 3.23e-48 | 167 |
MS.gene60394.t1 | AT3G44290 | 51.299 | 154 | 64 | 4 | 9 | 162 | 16 | 158 | 3.55e-48 | 165 |
MS.gene60394.t1 | AT5G61430 | 47.399 | 173 | 84 | 3 | 2 | 172 | 11 | 178 | 3.75e-48 | 164 |
MS.gene60394.t1 | AT2G02450 | 50.968 | 155 | 70 | 3 | 6 | 160 | 50 | 198 | 4.00e-48 | 166 |
MS.gene60394.t1 | AT1G32770 | 37.970 | 266 | 136 | 9 | 1 | 253 | 10 | 259 | 4.31e-48 | 165 |
MS.gene60394.t1 | AT1G62700 | 51.613 | 155 | 69 | 3 | 7 | 160 | 7 | 156 | 5.03e-48 | 166 |
MS.gene60394.t1 | AT1G62700 | 51.613 | 155 | 69 | 3 | 7 | 160 | 7 | 156 | 5.03e-48 | 166 |
MS.gene60394.t1 | AT5G64060 | 46.341 | 164 | 85 | 1 | 3 | 166 | 2 | 162 | 6.28e-48 | 164 |
MS.gene60394.t1 | AT5G62380 | 45.652 | 184 | 89 | 4 | 1 | 183 | 1 | 174 | 2.44e-47 | 163 |
MS.gene60394.t1 | AT5G62380 | 45.652 | 184 | 89 | 4 | 1 | 183 | 1 | 174 | 2.44e-47 | 163 |
MS.gene60394.t1 | AT2G24430 | 35.548 | 301 | 161 | 8 | 7 | 283 | 16 | 307 | 2.49e-47 | 162 |
MS.gene60394.t1 | AT2G24430 | 35.548 | 301 | 161 | 8 | 7 | 283 | 16 | 307 | 2.49e-47 | 162 |
MS.gene60394.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 7.15e-47 | 162 |
MS.gene60394.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 7.15e-47 | 162 |
MS.gene60394.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 7.15e-47 | 162 |
MS.gene60394.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 7.15e-47 | 162 |
MS.gene60394.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 7.15e-47 | 162 |
MS.gene60394.t1 | AT5G24590 | 51.282 | 156 | 74 | 1 | 7 | 162 | 13 | 166 | 1.70e-46 | 163 |
MS.gene60394.t1 | AT1G52890 | 45.556 | 180 | 91 | 3 | 5 | 184 | 12 | 184 | 1.73e-46 | 160 |
MS.gene60394.t1 | AT3G61910 | 42.157 | 204 | 97 | 5 | 1 | 188 | 5 | 203 | 1.80e-46 | 160 |
MS.gene60394.t1 | AT3G15500 | 47.024 | 168 | 84 | 2 | 5 | 172 | 12 | 174 | 2.43e-46 | 159 |
MS.gene60394.t1 | AT5G39610 | 47.674 | 172 | 77 | 4 | 7 | 173 | 20 | 183 | 2.51e-46 | 158 |
MS.gene60394.t1 | AT4G10350 | 50.289 | 173 | 74 | 6 | 7 | 173 | 9 | 175 | 2.57e-46 | 160 |
MS.gene60394.t1 | AT3G18400 | 47.826 | 161 | 78 | 3 | 7 | 167 | 5 | 159 | 6.00e-46 | 158 |
MS.gene60394.t1 | AT1G61110 | 48.538 | 171 | 72 | 5 | 7 | 165 | 16 | 182 | 6.26e-46 | 158 |
MS.gene60394.t1 | AT3G15170 | 43.721 | 215 | 104 | 5 | 6 | 215 | 19 | 221 | 7.23e-46 | 158 |
MS.gene60394.t1 | AT2G27300 | 50.327 | 153 | 65 | 4 | 7 | 159 | 14 | 155 | 1.21e-45 | 158 |
MS.gene60394.t1 | AT2G33480 | 50.943 | 159 | 68 | 3 | 2 | 160 | 10 | 158 | 1.30e-45 | 156 |
MS.gene60394.t1 | AT5G08790 | 39.754 | 244 | 128 | 6 | 1 | 238 | 1 | 231 | 1.92e-45 | 156 |
MS.gene60394.t1 | AT2G33480 | 51.875 | 160 | 67 | 4 | 2 | 160 | 10 | 160 | 2.32e-45 | 155 |
MS.gene60394.t1 | AT4G27410 | 46.448 | 183 | 80 | 3 | 5 | 172 | 12 | 191 | 4.46e-45 | 156 |
MS.gene60394.t1 | AT3G04070 | 48.503 | 167 | 75 | 4 | 7 | 164 | 10 | 174 | 5.45e-45 | 156 |
MS.gene60394.t1 | AT1G69490 | 49.390 | 164 | 72 | 4 | 7 | 165 | 9 | 166 | 6.11e-45 | 154 |
MS.gene60394.t1 | AT3G29035 | 46.821 | 173 | 79 | 3 | 7 | 179 | 24 | 183 | 1.00e-44 | 155 |
MS.gene60394.t1 | AT2G46770 | 42.714 | 199 | 82 | 6 | 1 | 178 | 10 | 197 | 1.21e-44 | 156 |
MS.gene60394.t1 | AT1G33280 | 49.677 | 155 | 71 | 4 | 7 | 160 | 8 | 156 | 1.42e-44 | 154 |
MS.gene60394.t1 | AT1G01720 | 47.953 | 171 | 77 | 4 | 1 | 166 | 1 | 164 | 2.09e-44 | 154 |
MS.gene60394.t1 | AT5G63790 | 43.655 | 197 | 98 | 4 | 1 | 192 | 44 | 232 | 4.57e-44 | 153 |
MS.gene60394.t1 | AT5G63790 | 43.655 | 197 | 98 | 4 | 1 | 192 | 54 | 242 | 5.13e-44 | 153 |
MS.gene60394.t1 | AT3G04070 | 52.899 | 138 | 61 | 2 | 7 | 142 | 10 | 145 | 7.76e-44 | 154 |
MS.gene60394.t1 | AT1G34190 | 53.957 | 139 | 61 | 1 | 2 | 140 | 11 | 146 | 9.79e-44 | 157 |
MS.gene60394.t1 | AT3G10480 | 44.974 | 189 | 67 | 3 | 7 | 161 | 27 | 212 | 1.55e-43 | 157 |
MS.gene60394.t1 | AT3G04060 | 46.386 | 166 | 83 | 3 | 7 | 170 | 20 | 181 | 1.69e-43 | 152 |
MS.gene60394.t1 | AT1G76420 | 48.765 | 162 | 79 | 3 | 7 | 168 | 22 | 179 | 1.80e-43 | 152 |
MS.gene60394.t1 | AT2G43000 | 48.366 | 153 | 73 | 3 | 9 | 160 | 20 | 167 | 3.15e-43 | 150 |
MS.gene60394.t1 | AT3G15510 | 45.238 | 168 | 78 | 4 | 11 | 167 | 21 | 185 | 1.47e-42 | 150 |
MS.gene60394.t1 | AT1G26870 | 41.129 | 248 | 119 | 9 | 1 | 226 | 12 | 254 | 4.02e-42 | 151 |
MS.gene60394.t1 | AT5G53950 | 52.941 | 136 | 61 | 2 | 7 | 142 | 17 | 149 | 4.43e-42 | 150 |
MS.gene60394.t1 | AT1G34180 | 50.658 | 152 | 72 | 1 | 9 | 160 | 18 | 166 | 4.48e-42 | 151 |
MS.gene60394.t1 | AT5G13180 | 54.074 | 135 | 56 | 2 | 3 | 137 | 10 | 138 | 9.98e-42 | 145 |
MS.gene60394.t1 | AT5G18270 | 46.951 | 164 | 73 | 4 | 7 | 164 | 21 | 176 | 1.34e-41 | 147 |
MS.gene60394.t1 | AT5G39820 | 52.273 | 132 | 60 | 2 | 6 | 137 | 19 | 147 | 1.57e-41 | 147 |
MS.gene60394.t1 | AT1G34180 | 50.658 | 152 | 72 | 1 | 9 | 160 | 18 | 166 | 2.18e-41 | 151 |
MS.gene60394.t1 | AT5G18270 | 46.341 | 164 | 74 | 4 | 7 | 164 | 21 | 176 | 2.26e-41 | 147 |
MS.gene60394.t1 | AT2G17040 | 44.737 | 152 | 77 | 2 | 9 | 160 | 8 | 152 | 5.93e-41 | 144 |
MS.gene60394.t1 | AT1G77450 | 41.791 | 201 | 105 | 5 | 5 | 201 | 8 | 200 | 1.06e-40 | 143 |
MS.gene60394.t1 | AT1G52880 | 47.239 | 163 | 75 | 4 | 11 | 164 | 21 | 181 | 1.39e-40 | 144 |
MS.gene60394.t1 | AT1G32870 | 58.779 | 131 | 49 | 2 | 7 | 137 | 10 | 135 | 2.08e-39 | 145 |
MS.gene60394.t1 | AT1G32870 | 58.779 | 131 | 49 | 2 | 7 | 137 | 10 | 135 | 2.15e-39 | 145 |
MS.gene60394.t1 | AT3G12977 | 40.838 | 191 | 105 | 4 | 7 | 194 | 18 | 203 | 2.54e-39 | 140 |
MS.gene60394.t1 | AT1G32870 | 58.779 | 131 | 49 | 2 | 7 | 137 | 46 | 171 | 3.99e-39 | 145 |
MS.gene60394.t1 | AT1G34180 | 46.951 | 164 | 72 | 2 | 9 | 160 | 18 | 178 | 6.68e-39 | 143 |
MS.gene60394.t1 | AT1G34180 | 46.951 | 164 | 72 | 2 | 9 | 160 | 18 | 178 | 2.60e-38 | 143 |
MS.gene60394.t1 | AT3G12910 | 38.462 | 221 | 103 | 7 | 2 | 194 | 17 | 232 | 3.28e-37 | 135 |
MS.gene60394.t1 | AT1G56010 | 45.963 | 161 | 74 | 5 | 7 | 161 | 19 | 172 | 4.86e-37 | 135 |
MS.gene60394.t1 | AT5G04395 | 45.517 | 145 | 68 | 1 | 7 | 140 | 28 | 172 | 1.39e-36 | 130 |
MS.gene60394.t1 | AT4G28530 | 43.503 | 177 | 71 | 6 | 7 | 164 | 10 | 176 | 1.30e-34 | 129 |
MS.gene60394.t1 | AT5G22380 | 36.000 | 200 | 107 | 6 | 10 | 190 | 8 | 205 | 3.62e-30 | 115 |
MS.gene60394.t1 | AT5G61430 | 49.550 | 111 | 51 | 2 | 64 | 172 | 8 | 115 | 1.54e-29 | 114 |
MS.gene60394.t1 | AT3G44350 | 33.649 | 211 | 122 | 8 | 7 | 202 | 5 | 212 | 6.24e-27 | 106 |
MS.gene60394.t1 | AT4G01550 | 38.636 | 176 | 101 | 4 | 10 | 184 | 7 | 176 | 6.29e-27 | 110 |
MS.gene60394.t1 | AT5G64530 | 43.609 | 133 | 60 | 4 | 7 | 139 | 3 | 120 | 1.34e-26 | 103 |
MS.gene60394.t1 | AT5G64530 | 43.609 | 133 | 60 | 4 | 7 | 139 | 3 | 120 | 2.74e-26 | 103 |
MS.gene60394.t1 | AT1G02230 | 33.908 | 174 | 104 | 5 | 5 | 176 | 1 | 165 | 2.92e-26 | 107 |
MS.gene60394.t1 | AT4G10350 | 52.212 | 113 | 47 | 4 | 64 | 173 | 20 | 128 | 8.26e-26 | 104 |
MS.gene60394.t1 | AT4G01520 | 35.000 | 160 | 97 | 3 | 8 | 165 | 5 | 159 | 2.41e-25 | 103 |
MS.gene60394.t1 | AT3G12977 | 50.505 | 99 | 45 | 2 | 64 | 161 | 20 | 115 | 7.83e-25 | 100 |
MS.gene60394.t1 | AT1G02250 | 37.126 | 167 | 95 | 5 | 8 | 171 | 4 | 163 | 5.29e-24 | 100 |
MS.gene60394.t1 | AT4G01540 | 34.810 | 158 | 96 | 3 | 10 | 165 | 7 | 159 | 1.11e-23 | 100 |
MS.gene60394.t1 | AT4G28530 | 45.946 | 111 | 40 | 3 | 7 | 100 | 10 | 117 | 1.26e-23 | 99.4 |
MS.gene60394.t1 | AT4G01540 | 34.810 | 158 | 96 | 3 | 10 | 165 | 7 | 159 | 1.90e-23 | 100 |
MS.gene60394.t1 | AT4G01540 | 30.769 | 195 | 125 | 4 | 10 | 199 | 7 | 196 | 2.26e-23 | 100 |
MS.gene60394.t1 | AT4G01540 | 34.810 | 158 | 96 | 3 | 10 | 165 | 7 | 159 | 3.08e-23 | 100 |
MS.gene60394.t1 | AT1G56010 | 50.485 | 103 | 41 | 3 | 64 | 161 | 8 | 105 | 5.82e-23 | 96.3 |
MS.gene60394.t1 | AT3G44350 | 37.410 | 139 | 82 | 4 | 7 | 142 | 5 | 141 | 1.25e-22 | 92.8 |
MS.gene60394.t1 | AT2G33480 | 50.000 | 98 | 44 | 3 | 64 | 160 | 10 | 103 | 2.01e-22 | 93.6 |
MS.gene60394.t1 | AT3G04420 | 38.462 | 130 | 75 | 3 | 8 | 135 | 4 | 130 | 9.91e-22 | 93.6 |
MS.gene60394.t1 | AT3G04420 | 38.462 | 130 | 75 | 3 | 8 | 135 | 4 | 130 | 1.51e-21 | 94.0 |
MS.gene60394.t1 | AT1G01010 | 30.348 | 201 | 120 | 8 | 10 | 198 | 6 | 198 | 8.04e-19 | 87.0 |
MS.gene60394.t1 | AT1G02220 | 33.835 | 133 | 74 | 4 | 8 | 135 | 4 | 127 | 3.28e-17 | 82.0 |
MS.gene60394.t1 | AT3G55210 | 34.014 | 147 | 80 | 4 | 4 | 137 | 8 | 150 | 2.37e-16 | 78.2 |
MS.gene60394.t1 | AT3G10490 | 49.383 | 81 | 37 | 2 | 82 | 161 | 2 | 79 | 4.75e-16 | 78.2 |
MS.gene60394.t1 | AT3G10490 | 49.383 | 81 | 37 | 2 | 82 | 161 | 2 | 79 | 4.75e-16 | 78.2 |
MS.gene60394.t1 | AT3G56530 | 31.613 | 155 | 98 | 4 | 5 | 157 | 50 | 198 | 5.64e-16 | 77.8 |
MS.gene60394.t1 | AT5G14000 | 31.429 | 140 | 87 | 3 | 1 | 138 | 9 | 141 | 1.79e-15 | 73.2 |
MS.gene60394.t1 | AT5G50820 | 31.250 | 160 | 96 | 5 | 4 | 159 | 14 | 163 | 2.24e-15 | 73.9 |
MS.gene60394.t1 | AT5G14000 | 27.461 | 193 | 128 | 4 | 1 | 191 | 9 | 191 | 2.44e-15 | 73.9 |
MS.gene60394.t1 | AT2G43000 | 40.659 | 91 | 50 | 2 | 71 | 160 | 2 | 89 | 1.88e-13 | 68.6 |
MS.gene60394.t1 | AT2G18060 | 44.595 | 74 | 36 | 2 | 87 | 160 | 2 | 70 | 2.55e-13 | 69.7 |
MS.gene60394.t1 | AT5G22290 | 46.667 | 75 | 31 | 3 | 88 | 162 | 2 | 67 | 9.99e-13 | 67.4 |
Find 69 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGGACTATAATGGAAAT+TGG | 0.146738 | 8.1:+24174266 | MS.gene60394:CDS |
CTATTTGTTCTTGATCCATT+TGG | 0.249925 | 8.1:-24173258 | None:intergenic |
TCAGATAATGTAAGTCAAAA+TGG | 0.276555 | 8.1:+24174208 | MS.gene60394:CDS |
AAACCAATCCTTCAAACTTC+TGG | 0.290622 | 8.1:+24173911 | MS.gene60394:CDS |
GTTTGAAGGATTGGTTTCTA+TGG | 0.297007 | 8.1:-24173905 | None:intergenic |
TATTTGTTCTTGATCCATTT+GGG | 0.300747 | 8.1:-24173257 | None:intergenic |
GAAGAATCAAGAATCATATC+AGG | 0.310654 | 8.1:-24173940 | None:intergenic |
GGGAATTTCATGGACTATAA+TGG | 0.316926 | 8.1:+24174259 | MS.gene60394:CDS |
TGAGGTCTCACTTCCATTGA+TGG | 0.347267 | 8.1:-24173791 | None:intergenic |
ATTATATGTACCTTAAAATA+TGG | 0.351863 | 8.1:-24173468 | None:intergenic |
TCCACTTGTTTGCCTTCAAA+TGG | 0.357996 | 8.1:-24174413 | None:intergenic |
CAAGCAAGTCACCTGAATAA+TGG | 0.364530 | 8.1:+24173841 | MS.gene60394:CDS |
ATTTGATTATAAACCTCATA+AGG | 0.374916 | 8.1:-24174295 | None:intergenic |
GGCTTTCCAGTAGCCAGCTT+TGG | 0.387525 | 8.1:-24173286 | None:intergenic |
GATCCAGAAGTTTGAAGGAT+TGG | 0.396961 | 8.1:-24173914 | None:intergenic |
AAGTTCTCAAGGGAATTTCA+TGG | 0.401113 | 8.1:+24174249 | MS.gene60394:CDS |
AACCATTCTAAATCTCGTTT+CGG | 0.406610 | 8.1:-24173207 | None:intergenic |
CTTTAGGCGATAGAACTAAC+TGG | 0.414854 | 8.1:+24173400 | MS.gene60394:CDS |
CATGGACTATAATGGAAATT+GGG | 0.418240 | 8.1:+24174267 | MS.gene60394:CDS |
TATCTTGGAAGGGCTCCTTT+AGG | 0.429258 | 8.1:+24173384 | MS.gene60394:CDS |
AAATTGGGATGTTCCTTATG+AGG | 0.431601 | 8.1:+24174282 | MS.gene60394:CDS |
GAGCTACCAAAGCTGGCTAC+TGG | 0.434106 | 8.1:+24173280 | MS.gene60394:CDS |
ACATGGTTAAACTCGGCAAT+TGG | 0.434194 | 8.1:-24173880 | None:intergenic |
TTTGCAGTTGCCTGTGATAG+TGG | 0.456084 | 8.1:-24173349 | None:intergenic |
TTCCCTTGAGAACTTGAGTA+AGG | 0.464374 | 8.1:-24174241 | None:intergenic |
TAGGATCAAGATCCATTTGA+AGG | 0.465784 | 8.1:+24174401 | MS.gene60394:intron |
GGGGAGATCCAGAAGTTTGA+AGG | 0.472729 | 8.1:-24173919 | None:intergenic |
TACCGAAACGAGATTTAGAA+TGG | 0.473383 | 8.1:+24173205 | MS.gene60394:CDS |
ACAAATAGAGCTACCAAAGC+TGG | 0.483596 | 8.1:+24173273 | MS.gene60394:CDS |
TATGATTCTTGATTCTTCAA+AGG | 0.498256 | 8.1:+24173945 | MS.gene60394:CDS |
CTAGTTCTTCATCAGTTGGA+TGG | 0.505033 | 8.1:-24172862 | None:intergenic |
CCAACTGATGAAGAACTAGT+TGG | 0.507449 | 8.1:+24172866 | MS.gene60394:CDS |
CAGTTAGTTCTATCGCCTAA+AGG | 0.507948 | 8.1:-24173399 | None:intergenic |
CCAACTAGTTCTTCATCAGT+TGG | 0.511441 | 8.1:-24172866 | None:intergenic |
CGAGATCTAAAGTACCCAAA+TGG | 0.514202 | 8.1:+24173243 | MS.gene60394:CDS |
AAATTTGAGTAGGATAAAGT+AGG | 0.517258 | 8.1:-24174166 | None:intergenic |
ATACTATCTTAAAAGAAAAG+TGG | 0.531146 | 8.1:+24172889 | MS.gene60394:CDS |
TCACCTTACTCAAGTTCTCA+AGG | 0.532937 | 8.1:+24174238 | MS.gene60394:CDS |
TTTGATCCATGGGAGTTGCC+TGG | 0.534126 | 8.1:+24172962 | MS.gene60394:CDS |
TGCCTTGGTGATTCACAGCT+AGG | 0.544811 | 8.1:-24174118 | None:intergenic |
GTTGCAACAAGTTCCATCAA+TGG | 0.552945 | 8.1:+24173778 | MS.gene60394:CDS |
GCTGGCTACTGGAAAGCCAC+TGG | 0.557528 | 8.1:+24173291 | MS.gene60394:CDS |
TTCAGCATTAAAATTTGAGT+AGG | 0.564818 | 8.1:-24174176 | None:intergenic |
AAGAATCAAGAATCATATCA+GGG | 0.565558 | 8.1:-24173939 | None:intergenic |
ATATGTTCCGATGATTGCCT+TGG | 0.568295 | 8.1:-24174133 | None:intergenic |
GATTGGTTTCTATGGAAACA+TGG | 0.569920 | 8.1:-24173897 | None:intergenic |
CCTTAAAATATGGAGAGTCT+TGG | 0.569933 | 8.1:-24173458 | None:intergenic |
AAAAGAATGAGAAGAGCAAG+AGG | 0.571312 | 8.1:+24173755 | MS.gene60394:CDS |
TGAATCACCAAGGCAATCAT+CGG | 0.573034 | 8.1:+24174126 | MS.gene60394:CDS |
TCCATTTGAAGGCAAACAAG+TGG | 0.581226 | 8.1:+24174412 | MS.gene60394:CDS |
TGTAGTTCATCCACTATCAC+AGG | 0.581968 | 8.1:+24173339 | MS.gene60394:CDS |
GTTGGATGGAAACGAAAACC+TGG | 0.593509 | 8.1:-24172848 | None:intergenic |
ACTGGATCATGCAAGAGTAT+CGG | 0.596245 | 8.1:+24173418 | MS.gene60394:CDS |
TATGGAAACATGGTTAAACT+CGG | 0.597037 | 8.1:-24173887 | None:intergenic |
CACCTTACTCAAGTTCTCAA+GGG | 0.598211 | 8.1:+24174239 | MS.gene60394:CDS |
AGATTACCAGGCAACTCCCA+TGG | 0.598328 | 8.1:-24172968 | None:intergenic |
GAATAATGGATCACAAAATG+TGG | 0.600990 | 8.1:+24173855 | MS.gene60394:CDS |
GGAGCATTATTACTGCCACC+AGG | 0.607504 | 8.1:+24172830 | MS.gene60394:CDS |
GTCACTTGAGAATCTCATTG+AGG | 0.608676 | 8.1:-24173809 | None:intergenic |
TATCTTAAAAGAAAAGTGGA+AGG | 0.610976 | 8.1:+24172893 | MS.gene60394:CDS |
AGAGTCTTGGCTAAGATCAT+CGG | 0.612585 | 8.1:-24173445 | None:intergenic |
CTTGGTGATTCACAGCTAGG+AGG | 0.629774 | 8.1:-24174115 | None:intergenic |
ACATTGCAATATAACATGGA+AGG | 0.636691 | 8.1:+24172809 | None:intergenic |
AAGAGAGAAAGATTGTGTGC+CGG | 0.639026 | 8.1:+24173316 | MS.gene60394:CDS |
AAAGAATGAGAAGAGCAAGA+GGG | 0.661577 | 8.1:+24173756 | MS.gene60394:CDS |
CTCCTAGCTGTGAATCACCA+AGG | 0.670903 | 8.1:+24174116 | MS.gene60394:CDS |
TGATAGTGGATGAACTACAC+CGG | 0.698203 | 8.1:-24173335 | None:intergenic |
AGAATCAAGAATCATATCAG+GGG | 0.707288 | 8.1:-24173938 | None:intergenic |
GGATGGAAACGAAAACCTGG+TGG | 0.763193 | 8.1:-24172845 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATAATATGAACAAATA+AGG | + | chr8.1:24173989-24174008 | MS.gene60394:intron | 10.0% |
!! | AATAGTATATTTCAAATGTA+AGG | + | chr8.1:24173044-24173063 | MS.gene60394:intron | 15.0% |
!! | ATTATATGTACCTTAAAATA+TGG | - | chr8.1:24173471-24173490 | None:intergenic | 15.0% |
!! | AATTTGTAAAAATCAATCAC+TGG | - | chr8.1:24172944-24172963 | None:intergenic | 20.0% |
!! | ATACTATCTTAAAAGAAAAG+TGG | + | chr8.1:24172889-24172908 | MS.gene60394:CDS | 20.0% |
!! | ATTTGATTATAAACCTCATA+AGG | - | chr8.1:24174298-24174317 | None:intergenic | 20.0% |
!!! | ATTTTTACAAATTTGATCCA+TGG | + | chr8.1:24172951-24172970 | MS.gene60394:CDS | 20.0% |
!!! | TCTAAAATCTGAAAACAAAA+GGG | + | chr8.1:24174344-24174363 | MS.gene60394:intron | 20.0% |
!!! | TTCTAAAATCTGAAAACAAA+AGG | + | chr8.1:24174343-24174362 | MS.gene60394:intron | 20.0% |
!!! | TTTGTTTTCAGATTTTAGAA+AGG | - | chr8.1:24174343-24174362 | None:intergenic | 20.0% |
!!! | TTTTTACAAATTTGATCCAT+GGG | + | chr8.1:24172952-24172971 | MS.gene60394:CDS | 20.0% |
!!! | TTTTTTTACTATGCCAAATT+AGG | + | chr8.1:24174382-24174401 | MS.gene60394:intron | 20.0% |
! | AAATTTGAGTAGGATAAAGT+AGG | - | chr8.1:24174169-24174188 | None:intergenic | 25.0% |
! | AAGAATCAAGAATCATATCA+GGG | - | chr8.1:24173942-24173961 | None:intergenic | 25.0% |
! | GAGATTGAATGACTATAATT+TGG | + | chr8.1:24174018-24174037 | MS.gene60394:intron | 25.0% |
! | TAAAAGATTCTATTTCACAC+AGG | - | chr8.1:24173104-24173123 | None:intergenic | 25.0% |
! | TAGTAAAAAAAGAGTGAGAA+TGG | - | chr8.1:24174373-24174392 | None:intergenic | 25.0% |
! | TATCTTAAAAGAAAAGTGGA+AGG | + | chr8.1:24172893-24172912 | MS.gene60394:CDS | 25.0% |
! | TATGATTCTTGATTCTTCAA+AGG | + | chr8.1:24173945-24173964 | MS.gene60394:CDS | 25.0% |
! | TATTTGTTCTTGATCCATTT+GGG | - | chr8.1:24173260-24173279 | None:intergenic | 25.0% |
! | TCAGATAATGTAAGTCAAAA+TGG | + | chr8.1:24174208-24174227 | MS.gene60394:CDS | 25.0% |
! | TTCAAATGTAAGGTTTGATA+TGG | + | chr8.1:24173054-24173073 | MS.gene60394:intron | 25.0% |
! | TTCAGCATTAAAATTTGAGT+AGG | - | chr8.1:24174179-24174198 | None:intergenic | 25.0% |
! | TTTCTGCATTGTTTATGATA+AGG | + | chr8.1:24173132-24173151 | MS.gene60394:intron | 25.0% |
!!! | AAAACACTTGTTTTCTATCT+TGG | + | chr8.1:24173369-24173388 | MS.gene60394:CDS | 25.0% |
!!! | TCTCATTCTTTTTGATAACT+CGG | - | chr8.1:24173747-24173766 | None:intergenic | 25.0% |
AACCATTCTAAATCTCGTTT+CGG | - | chr8.1:24173210-24173229 | None:intergenic | 30.0% | |
AATGGATCTTGATCCTAATT+TGG | - | chr8.1:24174398-24174417 | None:intergenic | 30.0% | |
ACAAAGCTAACACATTACTA+AGG | - | chr8.1:24173625-24173644 | None:intergenic | 30.0% | |
AGAATCAAGAATCATATCAG+GGG | - | chr8.1:24173941-24173960 | None:intergenic | 30.0% | |
ATGTGAAATTGAAGATTACC+AGG | - | chr8.1:24172983-24173002 | None:intergenic | 30.0% | |
CTATTTGTTCTTGATCCATT+TGG | - | chr8.1:24173261-24173280 | None:intergenic | 30.0% | |
GAAGAATCAAGAATCATATC+AGG | - | chr8.1:24173943-24173962 | None:intergenic | 30.0% | |
TATGGAAACATGGTTAAACT+CGG | - | chr8.1:24173890-24173909 | None:intergenic | 30.0% | |
! | CATGGACTATAATGGAAATT+GGG | + | chr8.1:24174267-24174286 | MS.gene60394:CDS | 30.0% |
! | CATTTTGTGATCCATTATTC+AGG | - | chr8.1:24173855-24173874 | None:intergenic | 30.0% |
! | TCATGGACTATAATGGAAAT+TGG | + | chr8.1:24174266-24174285 | MS.gene60394:CDS | 30.0% |
!! | AAGGAGTTTGTTTTCTATGT+AGG | - | chr8.1:24173606-24173625 | None:intergenic | 30.0% |
!! | ACTTGTTTTCTATCTTGGAA+GGG | + | chr8.1:24173374-24173393 | MS.gene60394:CDS | 30.0% |
!! | GAATAATGGATCACAAAATG+TGG | + | chr8.1:24173855-24173874 | MS.gene60394:CDS | 30.0% |
AAAAGAATGAGAAGAGCAAG+AGG | + | chr8.1:24173755-24173774 | MS.gene60394:CDS | 35.0% | |
AAACCAATCCTTCAAACTTC+TGG | + | chr8.1:24173911-24173930 | MS.gene60394:CDS | 35.0% | |
AAAGAATGAGAAGAGCAAGA+GGG | + | chr8.1:24173756-24173775 | MS.gene60394:CDS | 35.0% | |
AAATTGGGATGTTCCTTATG+AGG | + | chr8.1:24174282-24174301 | MS.gene60394:CDS | 35.0% | |
AAGTTCTCAAGGGAATTTCA+TGG | + | chr8.1:24174249-24174268 | MS.gene60394:CDS | 35.0% | |
CATTTCACACTTCATGCATT+AGG | - | chr8.1:24173170-24173189 | None:intergenic | 35.0% | |
CCTTAAAATATGGAGAGTCT+TGG | - | chr8.1:24173461-24173480 | None:intergenic | 35.0% | |
CTTTAGTATACTCCTACAGT+TGG | - | chr8.1:24174069-24174088 | None:intergenic | 35.0% | |
GAACGTTGGAAGACTAAATT+AGG | + | chr8.1:24173664-24173683 | MS.gene60394:intron | 35.0% | |
TACCGAAACGAGATTTAGAA+TGG | + | chr8.1:24173205-24173224 | MS.gene60394:CDS | 35.0% | |
TAGGATCAAGATCCATTTGA+AGG | + | chr8.1:24174401-24174420 | MS.gene60394:intron | 35.0% | |
! | AATCTTTCTCTCTTTTCCAG+TGG | - | chr8.1:24173310-24173329 | None:intergenic | 35.0% |
! | CCAAGACTCTCCATATTTTA+AGG | + | chr8.1:24173458-24173477 | MS.gene60394:CDS | 35.0% |
! | GGGAATTTCATGGACTATAA+TGG | + | chr8.1:24174259-24174278 | MS.gene60394:CDS | 35.0% |
! | GTAGCGTCTTTGTATTTTCA+CGG | + | chr8.1:24173505-24173524 | MS.gene60394:intron | 35.0% |
!! | CACTTGTTTTCTATCTTGGA+AGG | + | chr8.1:24173373-24173392 | MS.gene60394:CDS | 35.0% |
!! | CTTTAGCTTTAACAGAACGT+TGG | + | chr8.1:24173650-24173669 | MS.gene60394:intron | 35.0% |
!! | GATTGGTTTCTATGGAAACA+TGG | - | chr8.1:24173900-24173919 | None:intergenic | 35.0% |
!! | GTTTGAAGGATTGGTTTCTA+TGG | - | chr8.1:24173908-24173927 | None:intergenic | 35.0% |
!! | TTCAGATTTTAGAAAGGCTC+AGG | - | chr8.1:24174337-24174356 | None:intergenic | 35.0% |
AAGAGAGAAAGATTGTGTGC+CGG | + | chr8.1:24173316-24173335 | MS.gene60394:CDS | 40.0% | |
ACAAATAGAGCTACCAAAGC+TGG | + | chr8.1:24173273-24173292 | MS.gene60394:CDS | 40.0% | |
ACATGGTTAAACTCGGCAAT+TGG | - | chr8.1:24173883-24173902 | None:intergenic | 40.0% | |
AGAGTCTTGGCTAAGATCAT+CGG | - | chr8.1:24173448-24173467 | None:intergenic | 40.0% | |
ATATGTTCCGATGATTGCCT+TGG | - | chr8.1:24174136-24174155 | None:intergenic | 40.0% | |
CAAGCAAGTCACCTGAATAA+TGG | + | chr8.1:24173841-24173860 | MS.gene60394:CDS | 40.0% | |
CACCTTACTCAAGTTCTCAA+GGG | + | chr8.1:24174239-24174258 | MS.gene60394:CDS | 40.0% | |
CCAACTGATGAAGAACTAGT+TGG | + | chr8.1:24172866-24172885 | MS.gene60394:CDS | 40.0% | |
CTTTAGGCGATAGAACTAAC+TGG | + | chr8.1:24173400-24173419 | MS.gene60394:CDS | 40.0% | |
GATCCAGAAGTTTGAAGGAT+TGG | - | chr8.1:24173917-24173936 | None:intergenic | 40.0% | |
GCATATATGTGGTTGCTGTA+GGG | + | chr8.1:24173706-24173725 | MS.gene60394:intron | 40.0% | |
GTCACTTGAGAATCTCATTG+AGG | - | chr8.1:24173812-24173831 | None:intergenic | 40.0% | |
GTTGCAACAAGTTCCATCAA+TGG | + | chr8.1:24173778-24173797 | MS.gene60394:CDS | 40.0% | |
TCAATTGCAAGGCTATGATC+TGG | + | chr8.1:24173549-24173568 | MS.gene60394:intron | 40.0% | |
TCACCTTACTCAAGTTCTCA+AGG | + | chr8.1:24174238-24174257 | MS.gene60394:CDS | 40.0% | |
TCCACTTGTTTGCCTTCAAA+TGG | - | chr8.1:24174416-24174435 | None:intergenic | 40.0% | |
TCCATTTGAAGGCAAACAAG+TGG | + | chr8.1:24174412-24174431 | MS.gene60394:CDS | 40.0% | |
TGAATCACCAAGGCAATCAT+CGG | + | chr8.1:24174126-24174145 | MS.gene60394:CDS | 40.0% | |
TGCATATATGTGGTTGCTGT+AGG | + | chr8.1:24173705-24173724 | MS.gene60394:intron | 40.0% | |
TGTAGTTCATCCACTATCAC+AGG | + | chr8.1:24173339-24173358 | MS.gene60394:CDS | 40.0% | |
TTCCCTTGAGAACTTGAGTA+AGG | - | chr8.1:24174244-24174263 | None:intergenic | 40.0% | |
! | ACTGGATCATGCAAGAGTAT+CGG | + | chr8.1:24173418-24173437 | MS.gene60394:CDS | 40.0% |
! | AGTTTTACTGCACCAACTGT+AGG | + | chr8.1:24174054-24174073 | MS.gene60394:intron | 40.0% |
! | CCAACTAGTTCTTCATCAGT+TGG | - | chr8.1:24172869-24172888 | None:intergenic | 40.0% |
! | CGAGATCTAAAGTACCCAAA+TGG | + | chr8.1:24173243-24173262 | MS.gene60394:CDS | 40.0% |
! | CTAGTTCTTCATCAGTTGGA+TGG | - | chr8.1:24172865-24172884 | None:intergenic | 40.0% |
! | CTTTTACTTTAACGTGCGGT+GGG | + | chr8.1:24173574-24173593 | MS.gene60394:intron | 40.0% |
! | GGAGCTTTTACTTTAACGTG+CGG | + | chr8.1:24173570-24173589 | MS.gene60394:intron | 40.0% |
!! | CAGTTAGTTCTATCGCCTAA+AGG | - | chr8.1:24173402-24173421 | None:intergenic | 40.0% |
!! | TGATAGTGGATGAACTACAC+CGG | - | chr8.1:24173338-24173357 | None:intergenic | 40.0% |
GTTGGATGGAAACGAAAACC+TGG | - | chr8.1:24172851-24172870 | None:intergenic | 45.0% | |
TATATGTGGTTGCTGTAGGG+TGG | + | chr8.1:24173709-24173728 | MS.gene60394:intron | 45.0% | |
TATCTTGGAAGGGCTCCTTT+AGG | + | chr8.1:24173384-24173403 | MS.gene60394:CDS | 45.0% | |
TGAGGTCTCACTTCCATTGA+TGG | - | chr8.1:24173794-24173813 | None:intergenic | 45.0% | |
TTGAACGCACGTCAATTGCA+AGG | + | chr8.1:24173538-24173557 | MS.gene60394:intron | 45.0% | |
TTTGCAGTTGCCTGTGATAG+TGG | - | chr8.1:24173352-24173371 | None:intergenic | 45.0% | |
! | GCTTTTACTTTAACGTGCGG+TGG | + | chr8.1:24173573-24173592 | MS.gene60394:intron | 45.0% |
AGATTACCAGGCAACTCCCA+TGG | - | chr8.1:24172971-24172990 | None:intergenic | 50.0% | |
CTCCTAGCTGTGAATCACCA+AGG | + | chr8.1:24174116-24174135 | MS.gene60394:CDS | 50.0% | |
GGATGGAAACGAAAACCTGG+TGG | - | chr8.1:24172848-24172867 | None:intergenic | 50.0% | |
GGGGAGATCCAGAAGTTTGA+AGG | - | chr8.1:24173922-24173941 | None:intergenic | 50.0% | |
TTTGATCCATGGGAGTTGCC+TGG | + | chr8.1:24172962-24172981 | MS.gene60394:CDS | 50.0% | |
! | CTTGGTGATTCACAGCTAGG+AGG | - | chr8.1:24174118-24174137 | None:intergenic | 50.0% |
! | GGAGCATTATTACTGCCACC+AGG | + | chr8.1:24172830-24172849 | MS.gene60394:CDS | 50.0% |
! | TGCCTTGGTGATTCACAGCT+AGG | - | chr8.1:24174121-24174140 | None:intergenic | 50.0% |
GAGCTACCAAAGCTGGCTAC+TGG | + | chr8.1:24173280-24173299 | MS.gene60394:CDS | 55.0% | |
GGCTTTCCAGTAGCCAGCTT+TGG | - | chr8.1:24173289-24173308 | None:intergenic | 55.0% | |
TGCACGCGCGTGCATATATG+TGG | + | chr8.1:24173695-24173714 | MS.gene60394:intron | 55.0% | |
GCTGGCTACTGGAAAGCCAC+TGG | + | chr8.1:24173291-24173310 | MS.gene60394:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 24172824 | 24174457 | 24172824 | ID=MS.gene60394 |
chr8.1 | mRNA | 24172824 | 24174457 | 24172824 | ID=MS.gene60394.t1;Parent=MS.gene60394 |
chr8.1 | exon | 24172824 | 24172983 | 24172824 | ID=MS.gene60394.t1.exon1;Parent=MS.gene60394.t1 |
chr8.1 | CDS | 24172824 | 24172983 | 24172824 | ID=cds.MS.gene60394.t1;Parent=MS.gene60394.t1 |
chr8.1 | exon | 24173193 | 24173479 | 24173193 | ID=MS.gene60394.t1.exon2;Parent=MS.gene60394.t1 |
chr8.1 | CDS | 24173193 | 24173479 | 24173193 | ID=cds.MS.gene60394.t1;Parent=MS.gene60394.t1 |
chr8.1 | exon | 24173727 | 24173966 | 24173727 | ID=MS.gene60394.t1.exon3;Parent=MS.gene60394.t1 |
chr8.1 | CDS | 24173727 | 24173966 | 24173727 | ID=cds.MS.gene60394.t1;Parent=MS.gene60394.t1 |
chr8.1 | exon | 24174076 | 24174303 | 24174076 | ID=MS.gene60394.t1.exon4;Parent=MS.gene60394.t1 |
chr8.1 | CDS | 24174076 | 24174303 | 24174076 | ID=cds.MS.gene60394.t1;Parent=MS.gene60394.t1 |
chr8.1 | exon | 24174404 | 24174457 | 24174404 | ID=MS.gene60394.t1.exon5;Parent=MS.gene60394.t1 |
chr8.1 | CDS | 24174404 | 24174457 | 24174404 | ID=cds.MS.gene60394.t1;Parent=MS.gene60394.t1 |
Gene Sequence |
Protein sequence |