AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058083

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058083.t1 MTR_5g007230 96.744 215 5 1 1 215 1 213 5.69e-155 428
MS.gene058083.t1 MTR_4g078170 78.607 201 38 2 19 214 13 213 8.61e-116 329
MS.gene058083.t1 MTR_5g030130 70.755 212 55 2 7 211 21 232 1.03e-109 314
MS.gene058083.t1 MTR_8g066820 69.302 215 59 2 7 214 19 233 1.63e-106 306
MS.gene058083.t1 MTR_5g030130 75.352 142 35 0 7 148 21 162 4.61e-81 240
MS.gene058083.t1 MTR_1g062160 55.612 196 81 4 21 210 7 202 4.55e-72 218
MS.gene058083.t1 MTR_7g102790 55.500 200 82 4 21 213 7 206 1.35e-70 214
MS.gene058083.t1 MTR_2g060540 47.857 140 63 4 17 146 6 145 3.65e-40 135
MS.gene058083.t1 MTR_2g060500 46.429 140 65 3 17 146 6 145 8.44e-40 134
MS.gene058083.t1 MTR_2g084495 35.556 225 108 5 22 209 5 229 2.00e-39 135
MS.gene058083.t1 MTR_4g116300 45.185 135 73 1 21 155 6 139 1.52e-38 134
MS.gene058083.t1 MTR_2g084510 34.874 238 105 7 22 209 4 241 1.16e-37 131
MS.gene058083.t1 MTR_2g055210 44.030 134 73 2 21 154 102 233 2.55e-36 130
MS.gene058083.t1 MTR_2g084525 46.809 141 65 4 22 152 5 145 6.82e-35 124
MS.gene058083.t1 MTR_4g094680 31.944 216 119 4 21 209 22 236 3.21e-33 119
MS.gene058083.t1 MTR_2g036170 32.301 226 107 6 21 210 37 252 8.94e-30 111
MS.gene058083.t1 MTR_5g077740 28.426 197 108 7 17 209 19 186 1.27e-18 80.5
MS.gene058083.t1 MTR_8g097310 30.519 154 99 3 60 209 4 153 9.69e-17 74.7
MS.gene058083.t1 MTR_8g105930 32.877 146 75 5 23 147 15 158 6.22e-16 74.3
MS.gene058083.t1 MTR_1g032880 39.080 87 48 3 66 148 26 111 6.03e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058083.t1 AT4G17900 64.762 210 66 3 7 210 20 227 1.41e-95 278
MS.gene058083.t1 AT4G17900 66.667 198 58 3 19 210 18 213 4.65e-93 271
MS.gene058083.t1 AT1G32700 66.509 212 55 5 15 214 4 211 1.61e-91 267
MS.gene058083.t1 AT1G21000 49.174 242 81 5 10 209 5 246 3.51e-75 227
MS.gene058083.t1 AT1G21000 49.174 242 81 5 10 209 2 243 3.64e-75 227
MS.gene058083.t1 AT5G46710 53.883 206 86 4 13 209 4 209 2.72e-73 221
MS.gene058083.t1 AT5G46710 53.365 208 88 4 11 209 18 225 6.40e-73 221
MS.gene058083.t1 AT1G32700 66.477 176 45 4 49 214 1 172 2.64e-72 217
MS.gene058083.t1 AT1G76590 48.684 228 78 3 21 209 18 245 9.29e-71 216
MS.gene058083.t1 AT1G43000 45.495 222 102 3 7 209 2 223 3.21e-65 201
MS.gene058083.t1 AT1G43000 46.296 216 97 3 13 209 1 216 8.83e-65 199
MS.gene058083.t1 AT5G46710 59.420 138 55 1 11 147 18 155 1.12e-58 182
MS.gene058083.t1 AT2G27930 42.927 205 90 4 18 211 1 189 2.77e-51 164
MS.gene058083.t1 AT2G27930 42.927 205 90 4 18 211 1 189 2.77e-51 164
MS.gene058083.t1 AT2G27930 54.745 137 52 2 21 147 4 140 8.99e-48 155
MS.gene058083.t1 AT2G27930 54.745 137 52 2 21 147 4 140 8.99e-48 155
MS.gene058083.t1 AT2G12646 45.652 138 74 1 18 155 3 139 5.73e-40 137
MS.gene058083.t1 AT2G12646 45.652 138 74 1 18 155 3 139 5.73e-40 137
MS.gene058083.t1 AT2G12646 45.926 135 72 1 21 155 3 136 1.80e-39 136
MS.gene058083.t1 AT3G60670 45.455 132 71 1 16 147 2 132 1.68e-36 128
MS.gene058083.t1 AT1G31040 34.071 226 110 6 21 209 19 242 5.95e-35 124
MS.gene058083.t1 AT2G27930 43.243 148 58 3 74 211 61 192 1.15e-31 114
MS.gene058083.t1 AT2G27930 43.243 148 58 3 74 211 61 192 1.15e-31 114
MS.gene058083.t1 AT2G01818 32.127 221 126 6 12 209 2 221 1.23e-24 97.1
MS.gene058083.t1 AT2G01818 32.886 149 81 5 80 209 9 157 2.71e-12 62.8

Find 42 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTAAGTATTTAGTAAATA+AGG 0.240485 5.1:-1756892 None:intergenic
TTCACAGACATGGCAAATAT+TGG 0.300856 5.1:-1756042 None:intergenic
TATTTATTTACTCAGATAGT+TGG 0.359410 5.1:+1756680 MS.gene058083:intron
TCATTCACCTACTGCTCCCT+TGG 0.389190 5.1:+1756080 MS.gene058083:CDS
GGGGATGGAGAAGGTGTAGT+TGG 0.392811 5.1:+1754961 MS.gene058083:CDS
CTACTGCTCCCTTGGTTGTA+AGG 0.404328 5.1:+1756088 MS.gene058083:CDS
CTTCATATCATGATGTGATA+AGG 0.416229 5.1:+1755904 MS.gene058083:CDS
CAAAGATCACAGAGCTATCC+AGG 0.430527 5.1:+1755158 MS.gene058083:CDS
TTCTTGTTTGATAGATAAGA+AGG 0.443037 5.1:+1755880 MS.gene058083:intron
TTTCTTCTGGAATTTCTTGG+AGG 0.443249 5.1:-1756705 None:intergenic
TTCATATCATGATGTGATAA+GGG 0.444748 5.1:+1755905 MS.gene058083:CDS
AAAAGTTAAGTGAGAGAGAT+GGG 0.446555 5.1:+1756729 MS.gene058083:CDS
TTGTAAGGTGGCGGTGTTGA+AGG 0.453737 5.1:-1756818 None:intergenic
GTTCCACATAGAGCTCCAAT+AGG 0.475327 5.1:+1756863 MS.gene058083:CDS
TTCCACATAGAGCTCCAATA+GGG 0.487236 5.1:+1756864 MS.gene058083:CDS
AAGAACCTTGCTTGGAGAAG+TGG 0.495841 5.1:-1755033 None:intergenic
GTGACACCTTTGCCAGGCTT+AGG 0.508847 5.1:-1756020 None:intergenic
CCTTTGCCAGGCTTAGGCTG+AGG 0.513021 5.1:-1756014 None:intergenic
ATATTGGTGACACCTTTGCC+AGG 0.513857 5.1:-1756026 None:intergenic
ATTGAACAAAGAACCTTGCT+TGG 0.519311 5.1:-1755041 None:intergenic
AGTGAGAGAGATGGGTCAGA+TGG 0.523449 5.1:+1756737 MS.gene058083:CDS
CAAAATTGCTAAGAGGAGGA+AGG 0.525337 5.1:+1756838 MS.gene058083:CDS
GAAAGGCCTCAGCCTAAGCC+TGG 0.525826 5.1:+1756008 MS.gene058083:CDS
AGATTGTGTTCTTGAATGAA+AGG 0.538525 5.1:+1755991 MS.gene058083:CDS
TATTGCTTGGACTGTATGAA+TGG 0.540936 5.1:+1755105 MS.gene058083:CDS
TGAATGCAATATGTATTGCT+TGG 0.544713 5.1:+1755092 MS.gene058083:CDS
CACCTTACAAAATTGCTAAG+AGG 0.547965 5.1:+1756831 MS.gene058083:CDS
TGCAACCACTTCTCCAAGCA+AGG 0.549474 5.1:+1755028 MS.gene058083:CDS
GAAGGCTTCGTTCACAGACA+TGG 0.567153 5.1:-1756052 None:intergenic
AAAATTGCTAAGAGGAGGAA+GGG 0.570406 5.1:+1756839 MS.gene058083:CDS
TGGAGAAGTGGTTGCAACCA+TGG 0.580919 5.1:-1755021 None:intergenic
CTTACAACCAAGGGAGCAGT+AGG 0.590242 5.1:-1756087 None:intergenic
CCTCAGCCTAAGCCTGGCAA+AGG 0.590940 5.1:+1756014 MS.gene058083:CDS
AAGAAATCAAGTGGCCACCA+TGG 0.599172 5.1:+1755004 MS.gene058083:CDS
AATGCATACCTTACAACCAA+GGG 0.611602 5.1:-1756096 None:intergenic
TGAATGAAGAAGAAATCAAG+TGG 0.619967 5.1:+1754995 MS.gene058083:CDS
CTTACAAAATTGCTAAGAGG+AGG 0.624645 5.1:+1756834 MS.gene058083:CDS
AGTAGGTGAATGAATCAAGA+AGG 0.627686 5.1:-1756070 None:intergenic
TCCACATAGAGCTCCAATAG+GGG 0.638714 5.1:+1756865 MS.gene058083:CDS
CCACATAGAGCTCCAATAGG+GGG 0.648093 5.1:+1756866 MS.gene058083:CDS
CAATGCATACCTTACAACCA+AGG 0.674127 5.1:-1756097 None:intergenic
AGAAGTGGTTGCAACCATGG+TGG 0.773987 5.1:-1755018 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATCATGAAAAAAAAA+TGG - chr5.1:1754881-1754900 None:intergenic 10.0%
!! CAAAATAAAAATTTGAAAAA+TGG - chr5.1:1756656-1756675 None:intergenic 10.0%
!! TAATTATATGTATGTAATTA+GGG + chr5.1:1754940-1754959 MS.gene058083:intron 10.0%
!! TTAATTATATGTATGTAATT+AGG + chr5.1:1754939-1754958 MS.gene058083:intron 10.0%
!! AATTATATGTATGTAATTAG+GGG + chr5.1:1754941-1754960 MS.gene058083:intron 15.0%
!!! ATTTTACACTCAATTTTTAT+TGG + chr5.1:1756343-1756362 MS.gene058083:intron 15.0%
!!! GTCAAAAACATTTTTTTAAT+TGG - chr5.1:1755552-1755571 None:intergenic 15.0%
!!! GTTGTTTGATATTTTTAATT+TGG + chr5.1:1754916-1754935 MS.gene058083:intron 15.0%
!!! TTTTAAATCAATTTTGTAAG+AGG - chr5.1:1755726-1755745 None:intergenic 15.0%
!! AATGTTTGCATACTTATTAT+AGG - chr5.1:1756439-1756458 None:intergenic 20.0%
!! ACCACATATATGATATAATA+TGG + chr5.1:1755822-1755841 MS.gene058083:intron 20.0%
!! ATTATATGTATGTAATTAGG+GGG + chr5.1:1754942-1754961 MS.gene058083:intron 20.0%
!! CACAATAATAAATTGTTTGA+TGG - chr5.1:1755588-1755607 None:intergenic 20.0%
!! CCACATATATGATATAATAT+GGG + chr5.1:1755823-1755842 MS.gene058083:intron 20.0%
!! TAGAATCCATTAAAATACAT+TGG - chr5.1:1755438-1755457 None:intergenic 20.0%
!! TATTTATTTACTCAGATAGT+TGG + chr5.1:1756680-1756699 MS.gene058083:intron 20.0%
!! TGACTTTCATAAAATATAAG+AGG + chr5.1:1755686-1755705 MS.gene058083:intron 20.0%
!!! ATGTTATACTTACTTTTTCA+AGG - chr5.1:1756484-1756503 None:intergenic 20.0%
!!! ATTTGAAATCTTCACAAAAT+TGG - chr5.1:1755337-1755356 None:intergenic 20.0%
!!! TAATAAGTATGCAAACATTT+TGG + chr5.1:1756440-1756459 MS.gene058083:intron 20.0%
!!! TGTTATACTTACTTTTTCAA+GGG - chr5.1:1756483-1756502 None:intergenic 20.0%
! AAAATATTTGTCTTCTGTGT+TGG + chr5.1:1755458-1755477 MS.gene058083:intron 25.0%
! AATTATCACATCATGATTCA+TGG - chr5.1:1755634-1755653 None:intergenic 25.0%
! ATGAATCATGATGTGATAAT+TGG + chr5.1:1755633-1755652 MS.gene058083:intron 25.0%
! ATGTGTAGTATATGTTAAAG+GGG - chr5.1:1754840-1754859 None:intergenic 25.0%
! CATGTGTAGTATATGTTAAA+GGG - chr5.1:1754841-1754860 None:intergenic 25.0%
! CCCATATTATATCATATATG+TGG - chr5.1:1755826-1755845 None:intergenic 25.0%
! GAGTTAATTAACACTCAAAT+TGG + chr5.1:1756507-1756526 MS.gene058083:intron 25.0%
! GTCTTCAAAATTGTATTCAT+GGG + chr5.1:1756529-1756548 MS.gene058083:intron 25.0%
! TCTAGGTAACGTTTAATATT+AGG + chr5.1:1756406-1756425 MS.gene058083:intron 25.0%
! TTCATATCATGATGTGATAA+GGG + chr5.1:1755905-1755924 MS.gene058083:CDS 25.0%
!! TTCTTGTTTGATAGATAAGA+AGG + chr5.1:1755880-1755899 MS.gene058083:intron 25.0%
!!! AATCAAAAGCTTTGAATTTG+AGG + chr5.1:1755354-1755373 MS.gene058083:intron 25.0%
!!! AGAAATTTTTGGACATAACA+GGG + chr5.1:1755940-1755959 MS.gene058083:CDS 25.0%
!!! CACTTAACTTTTTTTTCTTC+TGG - chr5.1:1756721-1756740 None:intergenic 25.0%
!!! TATAAGTATCTTGTTTTACC+TGG - chr5.1:1755179-1755198 None:intergenic 25.0%
!!! TGAAAGCAATTTTAACTTGA+TGG - chr5.1:1756136-1756155 None:intergenic 25.0%
!!! TTTTTCAAGGGAAACAAATA+GGG - chr5.1:1756471-1756490 None:intergenic 25.0%
!!! TTTTTTCTTCTGGAATTTCT+TGG - chr5.1:1756711-1756730 None:intergenic 25.0%
AAAAAGTTAAGTGAGAGAGA+TGG + chr5.1:1756728-1756747 MS.gene058083:CDS 30.0%
AAAAGTTAAGTGAGAGAGAT+GGG + chr5.1:1756729-1756748 MS.gene058083:CDS 30.0%
ACCAAAACATTAACACATAC+AGG - chr5.1:1756318-1756337 None:intergenic 30.0%
AGATTGTGTTCTTGAATGAA+AGG + chr5.1:1755991-1756010 MS.gene058083:CDS 30.0%
ATTACTTCATAGTGTCAATG+TGG + chr5.1:1755268-1755287 MS.gene058083:intron 30.0%
ATTCAAAAGTCAACTATGGA+TGG + chr5.1:1755526-1755545 MS.gene058083:intron 30.0%
CCATGTGTAGTATATGTTAA+AGG - chr5.1:1754842-1754861 None:intergenic 30.0%
CCTTTAACATATACTACACA+TGG + chr5.1:1754839-1754858 MS.gene058083:intron 30.0%
CTTCACAAAATTGGATGAAA+TGG - chr5.1:1755328-1755347 None:intergenic 30.0%
CTTCATATCATGATGTGATA+AGG + chr5.1:1755904-1755923 MS.gene058083:CDS 30.0%
CTTGTACACATTACTTTCTT+GGG + chr5.1:1755405-1755424 MS.gene058083:intron 30.0%
GGTCTTCAAAATTGTATTCA+TGG + chr5.1:1756528-1756547 MS.gene058083:intron 30.0%
TGAATGAAGAAGAAATCAAG+TGG + chr5.1:1754995-1755014 MS.gene058083:CDS 30.0%
TGAATGCAATATGTATTGCT+TGG + chr5.1:1755092-1755111 MS.gene058083:CDS 30.0%
TGCAATTCAAAAGTCAACTA+TGG + chr5.1:1755522-1755541 MS.gene058083:intron 30.0%
TGTGCAATTTAAATAGCCAT+CGG + chr5.1:1755604-1755623 MS.gene058083:intron 30.0%
TTGTACACATTACTTTCTTG+GGG + chr5.1:1755406-1755425 MS.gene058083:intron 30.0%
! TCCTGTATGTGTTAATGTTT+TGG + chr5.1:1756314-1756333 MS.gene058083:intron 30.0%
!! AAGGGTCCAATGTATTTTAA+TGG + chr5.1:1755429-1755448 MS.gene058083:intron 30.0%
!! CAGAAATTTTTGGACATAAC+AGG + chr5.1:1755939-1755958 MS.gene058083:CDS 30.0%
!! CATATTGCATTCACTTTTGT+TGG - chr5.1:1755085-1755104 None:intergenic 30.0%
!! GAAATTTTTGGACATAACAG+GGG + chr5.1:1755941-1755960 MS.gene058083:CDS 30.0%
!! GTCTGAGATACAGAAATTTT+TGG + chr5.1:1755929-1755948 MS.gene058083:CDS 30.0%
!!! ATTTTAACTTGATGGAGAGT+TGG - chr5.1:1756128-1756147 None:intergenic 30.0%
!!! CTTTTTCAAGGGAAACAAAT+AGG - chr5.1:1756472-1756491 None:intergenic 30.0%
!!! TTTTAACTTGATGGAGAGTT+GGG - chr5.1:1756127-1756146 None:intergenic 30.0%
AAAATTGCTAAGAGGAGGAA+GGG + chr5.1:1756839-1756858 MS.gene058083:CDS 35.0%
AACGTTACCTAGATTGTTTG+AGG - chr5.1:1756399-1756418 None:intergenic 35.0%
AATGCATACCTTACAACCAA+GGG - chr5.1:1756099-1756118 None:intergenic 35.0%
AGTAGGTGAATGAATCAAGA+AGG - chr5.1:1756073-1756092 None:intergenic 35.0%
ATTGAACAAAGAACCTTGCT+TGG - chr5.1:1755044-1755063 None:intergenic 35.0%
CACCTTACAAAATTGCTAAG+AGG + chr5.1:1756831-1756850 MS.gene058083:CDS 35.0%
CCAAGAAAGTAATGTGTACA+AGG - chr5.1:1755407-1755426 None:intergenic 35.0%
CCTTGTACACATTACTTTCT+TGG + chr5.1:1755404-1755423 MS.gene058083:intron 35.0%
CTTACAAAATTGCTAAGAGG+AGG + chr5.1:1756834-1756853 MS.gene058083:CDS 35.0%
GATAATTGGATGATTGCTCA+AGG + chr5.1:1755647-1755666 MS.gene058083:intron 35.0%
TATGTATGTAATTAGGGGGA+TGG + chr5.1:1754946-1754965 MS.gene058083:intron 35.0%
TATTGCTTGGACTGTATGAA+TGG + chr5.1:1755105-1755124 MS.gene058083:CDS 35.0%
TTCACAGACATGGCAAATAT+TGG - chr5.1:1756045-1756064 None:intergenic 35.0%
! CTCCTCTTAGCAATTTTGTA+AGG - chr5.1:1756836-1756855 None:intergenic 35.0%
! CTCTTAGCAATTTTGTAAGG+TGG - chr5.1:1756833-1756852 None:intergenic 35.0%
! TTAGCAATTTTGTAAGGTGG+CGG - chr5.1:1756830-1756849 None:intergenic 35.0%
!! TTTCTTCTGGAATTTCTTGG+AGG - chr5.1:1756708-1756727 None:intergenic 35.0%
ACACATTACTTTCTTGGGGA+AGG + chr5.1:1755410-1755429 MS.gene058083:intron 40.0%
CAAAATTGCTAAGAGGAGGA+AGG + chr5.1:1756838-1756857 MS.gene058083:CDS 40.0%
CAATGCATACCTTACAACCA+AGG - chr5.1:1756100-1756119 None:intergenic 40.0%
CACATTACTTTCTTGGGGAA+GGG + chr5.1:1755411-1755430 MS.gene058083:intron 40.0%
GTTGTTGCCTCAAACAATCT+AGG + chr5.1:1756389-1756408 MS.gene058083:intron 40.0%
TTCCACATAGAGCTCCAATA+GGG + chr5.1:1756864-1756883 MS.gene058083:CDS 40.0%
TTTCTCATCGAACATGTGTC+TGG + chr5.1:1756176-1756195 MS.gene058083:intron 40.0%
AAGAAATCAAGTGGCCACCA+TGG + chr5.1:1755004-1755023 MS.gene058083:CDS 45.0%
AAGAACCTTGCTTGGAGAAG+TGG - chr5.1:1755036-1755055 None:intergenic 45.0%
CAAAGATCACAGAGCTATCC+AGG + chr5.1:1755158-1755177 MS.gene058083:CDS 45.0%
CATGATTCATGGTGAACCGA+TGG - chr5.1:1755623-1755642 None:intergenic 45.0%
GTTCCACATAGAGCTCCAAT+AGG + chr5.1:1756863-1756882 MS.gene058083:CDS 45.0%
TAAATAAGGCCTCCCCCTAT+TGG - chr5.1:1756881-1756900 None:intergenic 45.0%
TCCACATAGAGCTCCAATAG+GGG + chr5.1:1756865-1756884 MS.gene058083:CDS 45.0%
TGTAATTAGGGGGATGGAGA+AGG + chr5.1:1754952-1754971 MS.gene058083:intron 45.0%
! ATATTGGTGACACCTTTGCC+AGG - chr5.1:1756029-1756048 None:intergenic 45.0%
AGAAGTGGTTGCAACCATGG+TGG - chr5.1:1755021-1755040 None:intergenic 50.0%
AGTGAGAGAGATGGGTCAGA+TGG + chr5.1:1756737-1756756 MS.gene058083:CDS 50.0%
CCACATAGAGCTCCAATAGG+GGG + chr5.1:1756866-1756885 MS.gene058083:CDS 50.0%
CTACTGCTCCCTTGGTTGTA+AGG + chr5.1:1756088-1756107 MS.gene058083:CDS 50.0%
CTTACAACCAAGGGAGCAGT+AGG - chr5.1:1756090-1756109 None:intergenic 50.0%
GAAGGCTTCGTTCACAGACA+TGG - chr5.1:1756055-1756074 None:intergenic 50.0%
TCATTCACCTACTGCTCCCT+TGG + chr5.1:1756080-1756099 MS.gene058083:CDS 50.0%
TGCAACCACTTCTCCAAGCA+AGG + chr5.1:1755028-1755047 MS.gene058083:CDS 50.0%
TGGAGAAGTGGTTGCAACCA+TGG - chr5.1:1755024-1755043 None:intergenic 50.0%
! TTGTAAGGTGGCGGTGTTGA+AGG - chr5.1:1756821-1756840 None:intergenic 50.0%
CATAGAGCTCCAATAGGGGG+AGG + chr5.1:1756869-1756888 MS.gene058083:CDS 55.0%
CCCCCTATTGGAGCTCTATG+TGG - chr5.1:1756869-1756888 None:intergenic 55.0%
GTGACACCTTTGCCAGGCTT+AGG - chr5.1:1756023-1756042 None:intergenic 55.0%
! GGGGATGGAGAAGGTGTAGT+TGG + chr5.1:1754961-1754980 MS.gene058083:CDS 55.0%
CCTCAGCCTAAGCCTGGCAA+AGG + chr5.1:1756014-1756033 MS.gene058083:CDS 60.0%
CCTTTGCCAGGCTTAGGCTG+AGG - chr5.1:1756017-1756036 None:intergenic 60.0%
GAAAGGCCTCAGCCTAAGCC+TGG + chr5.1:1756008-1756027 MS.gene058083:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 1754805 1756904 1754805 ID=MS.gene058083
chr5.1 mRNA 1754805 1756904 1754805 ID=MS.gene058083.t1;Parent=MS.gene058083
chr5.1 exon 1754805 1754807 1754805 ID=MS.gene058083.t1.exon1;Parent=MS.gene058083.t1
chr5.1 CDS 1754805 1754807 1754805 ID=cds.MS.gene058083.t1;Parent=MS.gene058083.t1
chr5.1 exon 1754961 1755179 1754961 ID=MS.gene058083.t1.exon2;Parent=MS.gene058083.t1
chr5.1 CDS 1754961 1755179 1754961 ID=cds.MS.gene058083.t1;Parent=MS.gene058083.t1
chr5.1 exon 1755894 1756109 1755894 ID=MS.gene058083.t1.exon3;Parent=MS.gene058083.t1
chr5.1 CDS 1755894 1756109 1755894 ID=cds.MS.gene058083.t1;Parent=MS.gene058083.t1
chr5.1 exon 1756695 1756904 1756695 ID=MS.gene058083.t1.exon4;Parent=MS.gene058083.t1
chr5.1 CDS 1756695 1756904 1756695 ID=cds.MS.gene058083.t1;Parent=MS.gene058083.t1
Gene Sequence

>MS.gene058083

ATGGTGAGTATTACTACAAACAATCAATGCAACCCCTTTAACATATACTACACATGGACATGTCTTAATTTATCCATTTTTTTTTCATGATTTTATTAGTTTTCTAATTATGTTGTTTGATATTTTTAATTTGGTTAATTATATGTATGTAATTAGGGGGATGGAGAAGGTGTAGTTGGAGTGAGAAGTCTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAACCACTTCTCCAAGCAAGGTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCACTTTGTTCTTCTTGTCTAGCTTCTCACAAAGATCACAGAGCTATCCAGGTAAAACAAGATACTTATAAGCACTAATTGTCTTAGAGAATCTATAACATACATTAAAAGTGTATCATGAGACATGTAACTACATTCAATTACTTCATAGTGTCAATGTGGTGTCTGTGTGTTTTGTCTTTCATAGTCAATGACTCCATTTCATCCAATTTTGTGAAGATTTCAAATCAAAAGCTTTGAATTTGAGGATTTAAAATTAAATTTGATACTTGTAACCTTGTACACATTACTTTCTTGGGGAAGGGTCCAATGTATTTTAATGGATTCTAAAAATATTTGTCTTCTGTGTTGGTTTCATCGATCACAGTGTGTCATTGAATTGAATGCTCAATTTGCAATTCAAAAGTCAACTATGGATGGCCAATTAAAAAAATGTTTTTGACTTTTTTTTTTCTTCCATCAAACAATTTATTATTGTGCAATTTAAATAGCCATCGGTTCACCATGAATCATGATGTGATAATTGGATGATTGCTCAAGGAAAAAATAGACTATGATGACTTTCATAAAATATAAGAGGTTAGATCTAACTCACCTCTTACAAAATTGATTTAAAATGATTTATATAGTAATAGATATAAACTCATTTTTCACTTATAAATTCATTTTTTCACTTATAAATTCATTTTTTCAACCACATATATGATATAATATGGGACTAGTAACAAAATATTCTTTTAATTTAATTTTTTTCTTGTTTGATAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTTTGGACATAACAGGGGTTCAAACATACGTCATAAACAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAAGCCTGGCAAAGGTGTCACCAATATTTGCCATGTCTGTGAACGAAGCCTTCTTGATTCATTCACCTACTGCTCCCTTGGTTGTAAGGTATGCATTGTTAACCCAACTCTCCATCAAGTTAAAATTGCTTTCACACTTTGTAGTACTGATCTATTTCTCATCGAACATGTGTCTGGCGTCTTACATGTGTCAGTGTCTAATAGCGACATAATTGATTACATTAAATTAATTTAAAAAATATATATTTACGTGTCAATGTCATTGTGTCAATGTCATTGTTGTGTTTGATGTTCCTGTATGTGTTAATGTTTTGGTAGTTTATTTTACACTCAATTTTTATTGGTATACTTTTCTTGTGTTCATTTAGTTGTTGCCTCAAACAATCTAGGTAACGTTTAATATTAGGCAGCATTCCTATAATAAGTATGCAAACATTTTGGCTGTACCCTATTTGTTTCCCTTGAAAAAGTAAGTATAACATTGTGAGTTAATTAACACTCAAATTGGTCTTCAAAATTGTATTCATGGGTGAAAATTGTTCATCATTTTGACAAATGCATTCTGAAATTATAAACGTTGAAGAGTTAAGTGAGACTATCATGTGACAAGTTTAATGAGAAATTACATCTTCCATTTTTCAAATTTTTATTTTGTATGTATTTATTTACTCAGATAGTTGGAACCTCCAAGAAATTCCAGAAGAAAAAAAAGTTAAGTGAGAGAGATGGGTCAGATGGTGAAGAATCAAATAGTAATGAAAATGACATAAACATAAACAAAATTCAGAGCTTCACACCTTCAACACCGCCACCTTACAAAATTGCTAAGAGGAGGAAGGGAGTTCCACATAGAGCTCCAATAGGGGGAGGCCTTATTTACTAA
Protein sequence

>MS.gene058083.t1

MGDGEGVVGVRSLNEEEIKWPPWLQPLLQARFFVQCKVHADSNKSECNMYCLDCMNGALCSSCLASHKDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKIVFLNERPQPKPGKGVTNICHVCERSLLDSFTYCSLGCKIVGTSKKFQKKKKLSERDGSDGEESNSNENDININKIQSFTPSTPPPYKIAKRRKGVPHRAPIGGGLIY